mRNA_L-elsbetiae_contig7193.16030.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7193.16030.1 vs. uniprot
Match: D8LKT8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKT8_ECTSI) HSP 1 Score: 323 bits (827), Expect = 8.850e-107 Identity = 179/309 (57.93%), Postives = 214/309 (69.26%), Query Frame = 1 Query: 1 REGQLREIDKIISRCPCEEMLTWFAVQMFKEACLHNRLQTISFMVNHGLDVEFHAVLEAAHWLVEGCDEEQDGADVVPALNFLVVEAGMPPDVQRKSDFLTPLHVAVQRGLFEVARRLIDLGADINAVAKRVPSGDTSSDDVMPLNLAEQGQANDGGNDSDTSSSASPTIDDDITQETMAKKVLAVGSC--RHLPNGSDGTAESKE--------SLLLLDAEHGKGVGR-TEASGTDKSRSSCTVPRSRCRRR----IASRARICGLLIEKGARRSWRRAPSEQQVALHKKYAALLEDDDGRNLCTFSG 882 REG+LR++D++ CP EML WF V+MFKEAC HN LQT+ FMV+HGLDVEFHAVLEA HWLV+GCDEEQDG DVVPA++FLV EAGMPPDVQRKSDF TPLHVAV+RGLFE ARRLI+LGAD+NAVAK P G+ D VMPL LAE+ DG +D +S P DD+ + A ++ A + R+ +DG + + + L AE G+ G T G +RS RS CRRR +ASRARIC +L+E+GARR WRRAPSE+QVAL KKYA LLE DDGRN CTFSG Sbjct: 37 REGRLRDMDQVSRSCPRGEMLAWFTVRMFKEACAHNHLQTMRFMVDHGLDVEFHAVLEAVHWLVDGCDEEQDGIDVVPAIDFLVTEAGMPPDVQRKSDFRTPLHVAVRRGLFEAARRLIELGADVNAVAKMAPLGNAKGD-VMPLTLAEEPAETDGFRATDDTS---PEAGDDVATKGKAAEIAAGAAAVNRYHLTRNDGARDEQGVREEDHDVERMSLAAERGRQCGEETSHVGGVGARSPSPSSRSLCRRRWSRVMASRARICEILVERGARRGWRRAPSEEQVALDKKYAVLLEGDDGRNFCTFSG 341
BLAST of mRNA_L-elsbetiae_contig7193.16030.1 vs. uniprot
Match: A0A6H5L1X8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1X8_9PHAE) HSP 1 Score: 283 bits (724), Expect = 1.450e-90 Identity = 169/320 (52.81%), Postives = 203/320 (63.44%), Query Frame = 1 Query: 1 REGQLREIDKIISRCPCEEMLTWFAVQMFKEACLHNRLQTISFMVNHGLDVEFHAVLEAAHWLVEGCDEEQDGADVVPALNFLVVEAGMPPDVQRKSDFLTPLHVAVQRGLFEVARRLIDLGADINAVAKRVPSGDTSSDDVMPLNLAEQGQANDGGNDSDTSSSASPTIDDDITQETMAKKVLAVGSCRH------LPNGS---DGTAESKESL--LLLDAEHGKGVG----RTEASGTDK-----------SRSSCTVPRSRCRRRIASRARICGLLIEKGARRSWRRAPSEQQVALHKKYAALLEDDDGRNLCTFSG 882 REG+LR++D++ S CP E+L WF V+MFKEAC HNRLQT+ FMV+HGLDVEFHAVLEA HWLV+GCDEEQDG DVVPA++FLV EAGMPPDVQR GLFE ARRLI+LGAD+NAVAK P G+ D VMPL LAE+ +G +D +S P DD+ E A ++ A S + NG+ G E + + + L AE G+ G SG S SS ++ R R R ASRARICG+L+E+GARR WRRAPSE+QVAL KKYA LLE DDGRN CTFSG Sbjct: 86 REGRLRDMDQVSSSCPRGEILAWFTVRMFKEACTHNRLQTMRFMVDHGLDVEFHAVLEAVHWLVDGCDEEQDGMDVVPAIDFLVTEAGMPPDVQR--------------GLFEAARRLIELGADVNAVAKMAPLGNAKGD-VMPLTLAEEPAETNGFRATDDTS---PEARDDVGTEGQAAEIAAGASAVNGYYYLTRNNGARDEQGVREEEHDVERMSLAAERGRQCGDETSHVGGSGXXXXXXXXXXXXXXSPSSRSLCRRRWSRVTASRARICGILVERGARRGWRRAPSEEQVALDKKYAVLLEGDDGRNFCTFSG 387
BLAST of mRNA_L-elsbetiae_contig7193.16030.1 vs. uniprot
Match: A0A0P1A917_PLAHL (Ankyrin repeat-containing domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A917_PLAHL) HSP 1 Score: 91.7 bits (226), Expect = 6.000e-18 Identity = 51/145 (35.17%), Postives = 82/145 (56.55%), Query Frame = 1 Query: 1 REGQLREIDKIISRCPCEEMLTWFAVQMFKEACLHNRLQTISFMVNHGLDVEFHAVLEAAHWLVEGCDEEQDGADVVPALNFLVVEAGMPPDVQRKSDFLTPLHVAVQRGLFEVARRLIDLGADINAVAKRVPSGDTSSDDVMPL 435 R+G LR + + + ++LT++AV+MF+EAC RL + +M+ +G D++ + + H ++E D V P + FL+ AG+ + QRKSD T LHVA + L+ ++ L+ GAD+NAVA +DD MPL Sbjct: 42 RDGNLRALMCAVEQLQEGQVLTFYAVRMFREACAIKRLDILHYMLQNGFDLQQSYMWDTLHSIIETVDSNHSAELVQPLIRFLL-NAGIDVNWQRKSDLFTALHVACCKNLYSISYLLVIYGADVNAVA---------ADDAMPL 176
BLAST of mRNA_L-elsbetiae_contig7193.16030.1 vs. uniprot
Match: A0A225W5B3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W5B3_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 1.560e-17 Identity = 52/146 (35.62%), Postives = 81/146 (55.48%), Query Frame = 1 Query: 7 GQLREIDKIISRCPCEEMLTWFAVQMFKEACLHNRLQTISFMVNHGLDVEFHAVLEAAHWLVEGCDEEQDGADVVPALNFLVVEAGMPPDVQRKSDFLTPLHVAVQRGLFEVARRLIDLGADINAVAKRVPSGDTSSDDVMPLNLA 444 G LR + + ++L ++AV+MF++AC RL + FM+ +G D++ ++ + H +VE D Q P + FL+ +AG+ + QRKSD T LHVA + LF +A L+ GAD+NA+A +DD MPL A Sbjct: 44 GNLRALQCAVEHLEEGQVLIFYAVRMFRDACTMRRLDVLRFMLLNGFDIQQSSMKDILHTVVENVDSLQSADATQPLIRFLL-DAGVDVNWQRKSDLYTALHVACCKNLFPIAYLLVLYGADVNAIA---------ADDSMPLACA 179
BLAST of mRNA_L-elsbetiae_contig7193.16030.1 vs. uniprot
Match: D0MS03_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MS03_PHYIT) HSP 1 Score: 89.7 bits (221), Expect = 1.790e-17 Identity = 51/145 (35.17%), Postives = 80/145 (55.17%), Query Frame = 1 Query: 1 REGQLREIDKIISRCPCEEMLTWFAVQMFKEACLHNRLQTISFMVNHGLDVEFHAVLEAAHWLVEGCDEEQDGADVVPALNFLVVEAGMPPDVQRKSDFLTPLHVAVQRGLFEVARRLIDLGADINAVAKRVPSGDTSSDDVMPL 435 R G LR + +ML ++AV+MF+EAC R+ + FM+ +G D++ + + H ++E D Q V P + FL+ +AG+ + QRK+D T LHVA + L+ +A L+ GAD+NA+A +DD MPL Sbjct: 42 RNGNLRALQCAAEHLGEGQMLIFYAVRMFREACAGRRMDILQFMLLNGFDLQQSYMRDILHSVIENVDSPQSAEAVQPLIRFLL-DAGVDVNWQRKADLYTALHVACCKNLYPIAYLLVLYGADVNAIA---------ADDSMPL 176
BLAST of mRNA_L-elsbetiae_contig7193.16030.1 vs. uniprot
Match: A0A6A3S9Q7_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3S9Q7_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 2.840e-17 Identity = 53/148 (35.81%), Postives = 80/148 (54.05%), Query Frame = 1 Query: 1 REGQLREIDKIISRCPCEEMLTWFAVQMFKEACLHNRLQTISFMVNHGLDVEFHAVLEAAHWLVEGCDEEQDGADVVPALNFLVVEAGMPPDVQRKSDFLTPLHVAVQRGLFEVARRLIDLGADINAVAKRVPSGDTSSDDVMPLNLA 444 REG LR + +ML ++AV+MF+EAC RL + F++ +G D++ + + H ++E Q V P + FL+ +AG+ + QRKSD T LHVA + L+ +A L+ GAD+NA+A DD MPL A Sbjct: 42 REGNLRALQCAAEHLEEGQMLIFYAVRMFREACALRRLDILRFLLFNGFDLQQSYMRDILHGVIESIHSPQSADAVQPLIRFLL-DAGVDVNWQRKSDLYTALHVACCKNLYPIAYLLVLFGADVNAIAV---------DDAMPLACA 179
BLAST of mRNA_L-elsbetiae_contig7193.16030.1 vs. uniprot
Match: A0A833TEN5_PHYIN (Ankyrin repeat n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TEN5_PHYIN) HSP 1 Score: 89.7 bits (221), Expect = 2.550e-16 Identity = 51/145 (35.17%), Postives = 80/145 (55.17%), Query Frame = 1 Query: 1 REGQLREIDKIISRCPCEEMLTWFAVQMFKEACLHNRLQTISFMVNHGLDVEFHAVLEAAHWLVEGCDEEQDGADVVPALNFLVVEAGMPPDVQRKSDFLTPLHVAVQRGLFEVARRLIDLGADINAVAKRVPSGDTSSDDVMPL 435 R G LR + +ML ++AV+MF+EAC R+ + FM+ +G D++ + + H ++E D Q V P + FL+ +AG+ + QRK+D T LHVA + L+ +A L+ GAD+NA+A +DD MPL Sbjct: 42 RNGNLRALQCAAEHLGEGQMLIFYAVRMFREACAGRRMDILQFMLLNGFDLQQSYMRDILHSVIENVDSPQSAEAVQPLIRFLL-DAGVDVNWQRKADLYTALHVACCKNLYPIAYLLVLYGADVNAIA---------ADDSMPL 176
BLAST of mRNA_L-elsbetiae_contig7193.16030.1 vs. uniprot
Match: W2QEL4_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QEL4_PHYPN) HSP 1 Score: 86.7 bits (213), Expect = 3.620e-16 Identity = 50/148 (33.78%), Postives = 81/148 (54.73%), Query Frame = 1 Query: 1 REGQLREIDKIISRCPCEEMLTWFAVQMFKEACLHNRLQTISFMVNHGLDVEFHAVLEAAHWLVEGCDEEQDGADVVPALNFLVVEAGMPPDVQRKSDFLTPLHVAVQRGLFEVARRLIDLGADINAVAKRVPSGDTSSDDVMPLNLA 444 R+G LR ++ +ML ++ V+MF+EAC RL + FM+ +G D++ + + H +++ D Q V P + FL+ +AG+ + QR SD T LHVA + L+ +A L+ GAD+NA+A ++D MPL A Sbjct: 42 RDGNLRALECAAEYLEEGQMLIFYTVRMFREACATRRLDILRFMLLNGFDLQQSYMRDVLHSIIDNIDSPQSADAVQPLIRFLL-DAGVDVNWQRTSDLYTALHVACCKNLYPIAYLLVLFGADVNAIA---------ANDSMPLACA 179
BLAST of mRNA_L-elsbetiae_contig7193.16030.1 vs. uniprot
Match: A0A329SY44_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SY44_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 4.700e-16 Identity = 51/148 (34.46%), Postives = 80/148 (54.05%), Query Frame = 1 Query: 1 REGQLREIDKIISRCPCEEMLTWFAVQMFKEACLHNRLQTISFMVNHGLDVEFHAVLEAAHWLVEGCDEEQDGADVVPALNFLVVEAGMPPDVQRKSDFLTPLHVAVQRGLFEVARRLIDLGADINAVAKRVPSGDTSSDDVMPLNLA 444 R G LR + ++L ++AV+MF+EAC RL + FM+ + D++ + + H ++E D Q V P + FL+ +AG+ + QRKSD T LH+A + L+ +A L+ GAD+NA+A +DD MPL A Sbjct: 42 RNGNLRALQCAAEHLEEGQVLIFYAVRMFREACETRRLDILRFMLLNSFDLQQSYMRDILHNIIENVDNPQSADAVQPLIRFLL-DAGVDINWQRKSDLYTALHIACCQNLYPIAYLLVIYGADVNAIA---------ADDSMPLACA 179
BLAST of mRNA_L-elsbetiae_contig7193.16030.1 vs. uniprot
Match: A0A3R7KFT7_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KFT7_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 7.840e-16 Identity = 44/129 (34.11%), Postives = 74/129 (57.36%), Query Frame = 1 Query: 1 REGQLREIDKIISRCPCEEMLTWFAVQMFKEACLHNRLQTISFMVNHGLDVEFHAVLEAAHWLVEGCDEEQDGADVVPALNFLVVEAGMPPDVQRKSDFLTPLHVAVQRGLFEVARRLIDLGADINAVA 387 ++G LR + ++L ++ V++F+EAC RL + FM+ +G D++ V + H +V G D + P + FL+ +AG+ + QRKSD T LHVA ++ L+ +A L+ GAD+NA+A Sbjct: 42 QDGNLRALQCAAEHLDEGQVLIFYVVRVFREACRAQRLDVLRFMLLNGFDLQQSCVRDVLHSVVGGIDSPESADAAQPLVRFLL-DAGVDINWQRKSDLYTALHVACRKNLYSIAYLLVLYGADVNAIA 169 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7193.16030.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7193.16030.1 >prot_L-elsbetiae_contig7193.16030.1 ID=prot_L-elsbetiae_contig7193.16030.1|Name=mRNA_L-elsbetiae_contig7193.16030.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=295bp REGQLREIDKIISRCPCEEMLTWFAVQMFKEACLHNRLQTISFMVNHGLDback to top mRNA from alignment at L-elsbetiae_contig7193:5993..7893+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7193.16030.1 ID=mRNA_L-elsbetiae_contig7193.16030.1|Name=mRNA_L-elsbetiae_contig7193.16030.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1901bp|location=Sequence derived from alignment at L-elsbetiae_contig7193:5993..7893+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7193:5993..7893+ >mRNA_L-elsbetiae_contig7193.16030.1 ID=mRNA_L-elsbetiae_contig7193.16030.1|Name=mRNA_L-elsbetiae_contig7193.16030.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1770bp|location=Sequence derived from alignment at L-elsbetiae_contig7193:5993..7893+ (Laminarionema elsbetiae ELsaHSoW15)back to top |