mRNA_L-elsbetiae_contig7159.15985.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7159.15985.1
Unique NamemRNA_L-elsbetiae_contig7159.15985.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig7159.15985.1 vs. uniprot
Match: D7G0K9_ECTSI (Phosphate transporter n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0K9_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 3.850e-64
Identity = 98/119 (82.35%), Postives = 109/119 (91.60%), Query Frame = 1 
Query:    4 ECFEDNPGILMYGNMCVVYTTGIWLLMASFLELPVSTTHSTIGGIVGMAMTYRGPDCIVWFEETETFPFVDGIAGIVASWVLSPVLSGFIAVALFLFMRTFVLRSPNSAKRSIAVFPFL 360
            ECFEDNPGILMYGNMCVVYTTG WLL+ASF ELPVSTTHSTIGGIVGMA+TYRGPDC+VW+E+ + FP++ GI+ IVASWVLSPVLS  IAVALFLFMRTFVLRSP+S KR+I VFPFL
Sbjct:   91 ECFEDNPGILMYGNMCVVYTTGFWLLLASFFELPVSTTHSTIGGIVGMAITYRGPDCVVWYEKADLFPYLKGISAIVASWVLSPVLSAVIAVALFLFMRTFVLRSPDSHKRAIVVFPFL 209
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BLAST of mRNA_L-elsbetiae_contig7159.15985.1 vs. uniprot
Match: A0A6H5JNL8_9PHAE (Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNL8_9PHAE)

HSP 1 Score: 209 bits (533), Expect = 5.380e-64
Identity = 98/120 (81.67%), Postives = 109/120 (90.83%), Query Frame = 1 
Query:    1 IECFEDNPGILMYGNMCVVYTTGIWLLMASFLELPVSTTHSTIGGIVGMAMTYRGPDCIVWFEETETFPFVDGIAGIVASWVLSPVLSGFIAVALFLFMRTFVLRSPNSAKRSIAVFPFL 360
            IECF DNPGILMYGNMCVVYTTGIWLL+AS+ ELPVSTTHSTIGGIVGMAMTYRG DC+VW+EE + FP++ GI+ IVASWVLSPVLS  IAVALFLFMRTFVLRSP+S +R+I VFPFL
Sbjct:    5 IECFTDNPGILMYGNMCVVYTTGIWLLLASYFELPVSTTHSTIGGIVGMAMTYRGADCVVWYEEADLFPYLKGISAIVASWVLSPVLSAVIAVALFLFMRTFVLRSPDSHQRAIVVFPFL 124
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BLAST of mRNA_L-elsbetiae_contig7159.15985.1 vs. uniprot
Match: A0A6H5JNE7_9PHAE (Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNE7_9PHAE)

HSP 1 Score: 207 bits (528), Expect = 1.150e-62
Identity = 95/120 (79.17%), Postives = 108/120 (90.00%), Query Frame = 1 
Query:    1 IECFEDNPGILMYGNMCVVYTTGIWLLMASFLELPVSTTHSTIGGIVGMAMTYRGPDCIVWFEETETFPFVDGIAGIVASWVLSPVLSGFIAVALFLFMRTFVLRSPNSAKRSIAVFPFL 360
            IECFEDNPGILMYGNMCVVYTTGIWLL+ASF ELPVSTTHST+GGIVGMAMTYRG DC+VW+EE + FP++ G++ IVASW LSP+ S  IAVALFLFMRTFVLRSP++ KR+I VFPFL
Sbjct:   89 IECFEDNPGILMYGNMCVVYTTGIWLLLASFFELPVSTTHSTVGGIVGMAMTYRGADCVVWYEEADLFPYLKGVSAIVASWALSPLFSAVIAVALFLFMRTFVLRSPDAHKRAINVFPFL 208
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BLAST of mRNA_L-elsbetiae_contig7159.15985.1 vs. uniprot
Match: D7FWT9_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWT9_ECTSI)

HSP 1 Score: 191 bits (484), Expect = 4.900e-56
Identity = 86/120 (71.67%), Postives = 102/120 (85.00%), Query Frame = 1 
Query:    1 IECFEDNPGILMYGNMCVVYTTGIWLLMASFLELPVSTTHSTIGGIVGMAMTYRGPDCIVWFEETETFPFVDGIAGIVASWVLSPVLSGFIAVALFLFMRTFVLRSPNSAKRSIAVFPFL 360
            + CF DNPGILMYGNMCVVYT+G WLL+ASF ELPVSTTH+T+GGIVGMAMTYRG DC+VW+EE E FP++ G++ IVASW LSPVLS  IAVAL+ FMRTFVLR+  S K++I +FP L
Sbjct:   97 VGCFVDNPGILMYGNMCVVYTSGFWLLLASFFELPVSTTHATVGGIVGMAMTYRGADCVVWYEEAEFFPYLKGVSAIVASWALSPVLSAVIAVALYFFMRTFVLRADQSQKKAINIFPCL 216
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BLAST of mRNA_L-elsbetiae_contig7159.15985.1 vs. uniprot
Match: D7FZJ7_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZJ7_ECTSI)

HSP 1 Score: 182 bits (462), Expect = 6.950e-53
Identity = 83/120 (69.17%), Postives = 95/120 (79.17%), Query Frame = 1 
Query:    1 IECFEDNPGILMYGNMCVVYTTGIWLLMASFLELPVSTTHSTIGGIVGMAMTYRGPDCIVWFEETETFPFVDGIAGIVASWVLSPVLSGFIAVALFLFMRTFVLRSPNSAKRSIAVFPFL 360
            IECF DNPGILMYGNMCVVYT GIWLL+ASF ELPVSTTHSTIGGIVGM MTYRG DC+VW+EE + FP++ G+  IV SW L PVLSG +A  LF  +R  VLRS ++  RS+ VFP L
Sbjct:   90 IECFTDNPGILMYGNMCVVYTNGIWLLLASFFELPVSTTHSTIGGIVGMTMTYRGADCVVWYEEADHFPYIKGVFAIVVSWALFPVLSGVVATLLFFVVRALVLRSEHALNRSMIVFPLL 209
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BLAST of mRNA_L-elsbetiae_contig7159.15985.1 vs. uniprot
Match: D8LJQ4_ECTSI (High affinity phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ4_ECTSI)

HSP 1 Score: 172 bits (435), Expect = 9.440e-53
Identity = 74/120 (61.67%), Postives = 97/120 (80.83%), Query Frame = 1 
Query:    1 IECFEDNPGILMYGNMCVVYTTGIWLLMASFLELPVSTTHSTIGGIVGMAMTYRGPDCIVWFEETETFPFVDGIAGIVASWVLSPVLSGFIAVALFLFMRTFVLRSPNSAKRSIAVFPFL 360
            +ECF DNPG+LMYG MCVVYTTG+WLL+AS+L LPVSTTH+TIG ++GM + Y G  C+VWF+E+++FP+V G+A I  SWVLSP+ SG +++ +FL +R FVLRSPN+  RS  VFP L
Sbjct:   29 VECFLDNPGVLMYGMMCVVYTTGMWLLLASYLALPVSTTHATIGAMIGMTVVYGGAGCVVWFQESDSFPYVKGVAAIAVSWVLSPIFSGIVSLLVFLTVRAFVLRSPNAFGRSFWVFPIL 148
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BLAST of mRNA_L-elsbetiae_contig7159.15985.1 vs. uniprot
Match: D8LJQ6_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ6_ECTSI)

HSP 1 Score: 172 bits (437), Expect = 1.640e-49
Identity = 77/120 (64.17%), Postives = 96/120 (80.00%), Query Frame = 1 
Query:    1 IECFEDNPGILMYGNMCVVYTTGIWLLMASFLELPVSTTHSTIGGIVGMAMTYRGPDCIVWFEETETFPFVDGIAGIVASWVLSPVLSGFIAVALFLFMRTFVLRSPNSAKRSIAVFPFL 360
            +ECF DNPGILMYG MCVVYTTG+WLL+AS+LELPVSTTHSTIG I+GMA+ Y G  C+VW++E++ FP+  G+A I  SWVLSP+ SG  ++ +FL +R FVLRSPN+  RS  VFP L
Sbjct:   50 VECFLDNPGILMYGMMCVVYTTGMWLLLASYLELPVSTTHSTIGAIIGMAVAYAGSGCVVWYQESDIFPYFKGVAAIAVSWVLSPIFSGVASLLVFLTVRAFVLRSPNAFGRSFWVFPVL 169
[Close]
BLAST of mRNA_L-elsbetiae_contig7159.15985.1 vs. uniprot
Match: D8LJP9_ECTSI (High affinity phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJP9_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 3.060e-44
Identity = 67/120 (55.83%), Postives = 88/120 (73.33%), Query Frame = 1 
Query:    1 IECFEDNPGILMYGNMCVVYTTGIWLLMASFLELPVSTTHSTIGGIVGMAMTYRGPDCIVWFEETETFPFVDGIAGIVASWVLSPVLSGFIAVALFLFMRTFVLRSPNSAKRSIAVFPFL 360
            + CF DNPG+LMYG MCV+YTT +WLL+AS+LELPVS T STI  IVGM + Y G  C+VW  E+E FP   G+  I+  W+LSP+++G  +  +FL +RTFVLRSP++ +RS  VFP L
Sbjct:    7 VSCFLDNPGVLMYGMMCVLYTTAMWLLLASYLELPVSATQSTISSIVGMTLAYGGRACVVWHRESEHFPGFQGVGAILLYWLLSPIVAGVASCLVFLALRTFVLRSPHAFRRSFWVFPVL 126
[Close]
BLAST of mRNA_L-elsbetiae_contig7159.15985.1 vs. uniprot
Match: A0A7R9T173_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A0A7R9T173_9CHLO)

HSP 1 Score: 149 bits (375), Expect = 4.780e-43
Identity = 62/119 (52.10%), Postives = 89/119 (74.79%), Query Frame = 1 
Query:    4 ECFEDNPGILMYGNMCVVYTTGIWLLMASFLELPVSTTHSTIGGIVGMAMTYRGPDCIVWFEETETFPFVDGIAGIVASWVLSPVLSGFIAVALFLFMRTFVLRSPNSAKRSIAVFPFL 360
            +CF D+PG+LMYG +CV+++  IWL++ASFLE+PVSTTHS +GG++GM M  RG  C+VW  +++TFP++ G+A IV SW+LSP++SG  +   FL +R  V+RS NS  R+   FP L
Sbjct:   16 DCFNDDPGLLMYGCLCVIFSVAIWLVVASFLEMPVSTTHSCVGGMIGMTMVARGSSCVVWSAKSDTFPYIKGVAAIVVSWLLSPIVSGGFSFVFFLTLRALVMRSQNSYARARLAFPVL 134
[Close]
BLAST of mRNA_L-elsbetiae_contig7159.15985.1 vs. uniprot
Match: A0A6S9IV20_HETAK (Phosphate transporter n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9IV20_HETAK)

HSP 1 Score: 155 bits (391), Expect = 1.720e-42
Identity = 67/120 (55.83%), Postives = 91/120 (75.83%), Query Frame = 1 
Query:    1 IECFEDNPGILMYGNMCVVYTTGIWLLMASFLELPVSTTHSTIGGIVGMAMTYRGPDCIVWFEETETFPFVDGIAGIVASWVLSPVLSGFIAVALFLFMRTFVLRSPNSAKRSIAVFPFL 360
            I+CF D+  +LMYG  CV++ TG+WLL+A+FL++PVSTTHS +GGI+GM +  +G  C+VW  +T+TFP+V G++ IV SW LSP+ SG  A ALFLF RTF+LRS NS  R+I  +P L
Sbjct:   88 IDCFMDDGPVLMYGMCCVIFCTGLWLLLATFLKMPVSTTHSVVGGIIGMTIAAKGGSCVVWHADTDTFPYVKGVSAIVVSWFLSPIFSGVGAAALFLFCRTFILRSENSYNRAIYFYPLL 207
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7159.15985.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0K9_ECTSI3.850e-6482.35Phosphate transporter n=2 Tax=Ectocarpus siliculos... [more]
A0A6H5JNL8_9PHAE5.380e-6481.67Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP ... [more]
A0A6H5JNE7_9PHAE1.150e-6279.17Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP ... [more]
D7FWT9_ECTSI4.900e-5671.67Phosphate transporter n=1 Tax=Ectocarpus siliculos... [more]
D7FZJ7_ECTSI6.950e-5369.17Phosphate transporter n=1 Tax=Ectocarpus siliculos... [more]
D8LJQ4_ECTSI9.440e-5361.67High affinity phosphate transporter n=1 Tax=Ectoca... [more]
D8LJQ6_ECTSI1.640e-4964.17Phosphate transporter n=1 Tax=Ectocarpus siliculos... [more]
D8LJP9_ECTSI3.060e-4455.83High affinity phosphate transporter n=1 Tax=Ectoca... [more]
A0A7R9T173_9CHLO4.780e-4352.10Hypothetical protein (Fragment) n=1 Tax=Ostreococc... [more]
A0A6S9IV20_HETAK1.720e-4255.83Phosphate transporter n=3 Tax=Heterosigma akashiwo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7159contigL-elsbetiae_contig7159:2..653 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score211.5
Seed ortholog evalue2.2e-52
Seed eggNOG ortholog2880.D7G0K9
Preferred namePHO89
KEGG koko:K01280,ko:K03306,ko:K14640
KEGG TC2.A.20,2.A.20.2
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005215,GO:0005315,GO:0005436,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0006817,GO:0006820,GO:0008150,GO:0008324,GO:0012505,GO:0015075,GO:0015077,GO:0015081,GO:0015291,GO:0015293,GO:0015294,GO:0015318,GO:0015319,GO:0015370,GO:0015672,GO:0015698,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0035435,GO:0035725,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098655,GO:0098656,GO:0098660,GO:0098661,GO:0098662
EggNOG free text desc.inorganic phosphate transmembrane transporter activity
EggNOG OGsCOG0306@1,KOG2493@2759
EC3.4.14.10
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko02000,ko03110
Exons2
Model size360
Cds size360
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816795.327604-CDS-L-elsbetiae_contig7159:1..1451622816795.327604-CDS-L-elsbetiae_contig7159:1..145Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7159 2..145 -
1691683819.2420967-CDS-L-elsbetiae_contig7159:1..1451691683819.2420967-CDS-L-elsbetiae_contig7159:1..145Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7159 2..145 -
1622816795.3382058-CDS-L-elsbetiae_contig7159:437..6531622816795.3382058-CDS-L-elsbetiae_contig7159:437..653Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7159 438..653 -
1691683819.256372-CDS-L-elsbetiae_contig7159:437..6531691683819.256372-CDS-L-elsbetiae_contig7159:437..653Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7159 438..653 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7159.15985.1prot_L-elsbetiae_contig7159.15985.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7159 2..653 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7159.15985.1

>prot_L-elsbetiae_contig7159.15985.1 ID=prot_L-elsbetiae_contig7159.15985.1|Name=mRNA_L-elsbetiae_contig7159.15985.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=120bp
IECFEDNPGILMYGNMCVVYTTGIWLLMASFLELPVSTTHSTIGGIVGMA
MTYRGPDCIVWFEETETFPFVDGIAGIVASWVLSPVLSGFIAVALFLFMR
TFVLRSPNSAKRSIAVFPFL
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mRNA from alignment at L-elsbetiae_contig7159:2..653-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7159.15985.1 ID=mRNA_L-elsbetiae_contig7159.15985.1|Name=mRNA_L-elsbetiae_contig7159.15985.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=652bp|location=Sequence derived from alignment at L-elsbetiae_contig7159:2..653- (Laminarionema elsbetiae ELsaHSoW15)
ATCGAGTGCTTCGAGGATAACCCGGGAATCCTGATGTACGGCAACATGTG
CGTCGTGTATACCACCGGAATCTGGCTCCTGATGGCGTCCTTCCTCGAGC
TACCCGTGTCCACCACCCACTCCACCATCGGAGGCATCGTCGGAATGGCT
ATGACCTACCGTGGCCCCGACTGCATCGTGTGGTTCGAGGAGACCGAGAC
TTTCCCCTTTGTGGATGTGAGCATGCCCTTACATCTATCTATACCTACCT
GTGGAACCGTTGCTGTCAACCTAAAACCGAGGCTTGATCGATCGGTCTGT
ACACTTCGGTTCTCTTGAAGCGTTAGCAAAAATTGCCTGCATTGGTTCTG
ACACCATGGCTCACTATCTTCAAATCAGCCCATTGTGCGATTTATTCAGC
ACCCCCTTCCGGCTTACGTTGTTCGCCCCCCGCCTCGCTGCTCCCGAACA
AACAAACTTTCCCATAAACCACTGAACGGCACCGATCGACCGATTGGGTG
AATCACAGGGTATTGCCGGCATCGTGGCCTCTTGGGTGCTTTCTCCCGTC
CTGTCAGGATTCATTGCCGTCGCCCTGTTCCTGTTCATGAGGACCTTCGT
GCTGCGGTCGCCCAACTCCGCCAAGAGATCCATCGCCGTCTTCCCCTTCC
TG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7159:2..653-

>mRNA_L-elsbetiae_contig7159.15985.1 ID=mRNA_L-elsbetiae_contig7159.15985.1|Name=mRNA_L-elsbetiae_contig7159.15985.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=720bp|location=Sequence derived from alignment at L-elsbetiae_contig7159:2..653- (Laminarionema elsbetiae ELsaHSoW15)
ATCGAGTGCTTCGAGGATAACCCGGGAATCCTGATGTACGGCAACATGTG
CGTCGTGTATACCACCGGAATCTGGCTCCTGATGGCGTCCTTCCTCGAGC
TACCCGTGTCCACCACCCACTCCACCATCGGAGGCATCGTCGGAATGGCT
ATGACCTACCGTGGCCCCGACTGCATCGTGTGGTTCGAGGAGACCGAGAC
TTTCCCCTTTGTGGATATCGAGTGCTTCGAGGATAACCCGGGAATCCTGA
TGTACGGCAACATGTGCGTCGTGTATACCACCGGAATCTGGCTCCTGATG
GCGTCCTTCCTCGAGCTACCCGTGTCCACCACCCACTCCACCATCGGAGG
CATCGTCGGAATGGCTATGACCTACCGTGGCCCCGACTGCATCGTGTGGT
TCGAGGAGACCGAGACTTTCCCCTTTGTGGATGGTATTGCCGGCATCGTG
GCCTCTTGGGTGCTTTCTCCCGTCCTGTCAGGATTCATTGCCGTCGCCCT
GTTCCTGTTCATGAGGACCTTCGTGCTGCGGTCGCCCAACTCCGCCAAGA
GATCCATCGCCGTCTTCCCCTTCCTGGGTATTGCCGGCATCGTGGCCTCT
TGGGTGCTTTCTCCCGTCCTGTCAGGATTCATTGCCGTCGCCCTGTTCCT
GTTCATGAGGACCTTCGTGCTGCGGTCGCCCAACTCCGCCAAGAGATCCA
TCGCCGTCTTCCCCTTCCTG
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