mRNA_L-elsbetiae_contig7.15785.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7.15785.1
Unique NamemRNA_L-elsbetiae_contig7.15785.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7.15785.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7contigL-elsbetiae_contig7:15138..17280 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size494
Cds size492
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816775.8103735-CDS-L-elsbetiae_contig7:15138..155401622816775.8103735-CDS-L-elsbetiae_contig7:15138..15540Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7 15139..15540 -
1691683804.197553-CDS-L-elsbetiae_contig7:15138..155401691683804.197553-CDS-L-elsbetiae_contig7:15138..15540Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7 15139..15540 -
1622816775.8222814-CDS-L-elsbetiae_contig7:17190..172801622816775.8222814-CDS-L-elsbetiae_contig7:17190..17280Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7 17191..17280 -
1691683804.212099-CDS-L-elsbetiae_contig7:17190..172801691683804.212099-CDS-L-elsbetiae_contig7:17190..17280Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7 17191..17280 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7.15785.1prot_L-elsbetiae_contig7.15785.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7 15139..17280 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7.15785.1

>prot_L-elsbetiae_contig7.15785.1 ID=prot_L-elsbetiae_contig7.15785.1|Name=mRNA_L-elsbetiae_contig7.15785.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=164bp
TEQVVNTGRCREMNLVRVSAVGHGDFGRDETALGKNADEERAARETTAQR
QDTGRPTPTTPTAPPESNHPPPAEAPQTAAGSAAAAAAAATTSTPGTNSG
GALAFHAAAAAGDILSVEAYIALNADKIARSRAVSDGGGLLYGKEADTAA
GGFAAALLVVPGPN
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mRNA from alignment at L-elsbetiae_contig7:15138..17280-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7.15785.1 ID=mRNA_L-elsbetiae_contig7.15785.1|Name=mRNA_L-elsbetiae_contig7.15785.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2143bp|location=Sequence derived from alignment at L-elsbetiae_contig7:15138..17280- (Laminarionema elsbetiae ELsaHSoW15)
ACGGAGCAAGTGGTGAACACAGGACGCTGCAGGGAGATGAACCTCGTGAG
AGTTAGCGCTGTGGGTCATGGAGATTTCGGTCGGGATGAGGTGAGAGGAC
TAAAGCTGTGTTGTTGTGTATTTTGCGGCGGAAACGGAGGGAAAACGTCG
GCAGTTACGTCGTATTGCTGTAGTGCTGACGTGCTGACGTGCACGCTGTC
TCGTACGCTGTCTCGTCTCGAGCTGGAGTAGATGGTGTGCGTACGGCGAG
GTGTGAGATGCCCTTCAGGCCTTCCCCATGCTCTGGCAAATGTTTCGCGG
TTTGAAAAAAGGAGATTTGACCCCACATCGCCCAAGCCAGCTAAAAATAT
TTTTTCATTTTTTTCGAACTCGCCATCGGGAGGAAAGACAGAAGCAGCAC
AGAGAATCGGACTGACTACGTCTTGCAAACACAGATCCGTGTTCGCTGGC
TAGCATCGATGAGACCACCTCTCGCCTTCCACCAGACGGGCCTACAAATA
TCTAAGGCGGACGTGTGGCGCGATCGCGATTTACTGGTTGTTTCGAATCA
ACCGAGAGAGCGTATAGGAGACCCTGCTGCCCTTGACTCTTGACACACGC
TTCGCTCACACGAGTACCCCACCGCGGTCCACGGTGTGCTCACCAATAGA
GTGCCCACAAACCAAAAACTCATCCTACGCGCCTATAAACCTTCGACAAA
CCTACAGCGTCTCGCCTTCGTGTGTCTCATCTCATATCTTGCCCTACATA
CCGCGTATATTAATTACATAGTGTCGTTACAAGTTGGGCCAGTTCCATTA
TATTGTAATGGTCTCAGAAAGTCGGTTTTATGCCTTGGTTCGCATAGAAA
CCCCTTTTTGGAGGGCAGAAAATGCCGATGGGAAATGGTGCAACGGCCCG
AAAACGCACGGCACCACCGATTTCTCGCCCTCCTGCTCACGGATCACGCT
CTAGCCTTCAGAGTACAAGCTCCGTGTTGATGAGCATCATAGTTCGTATA
TGTCAAGCAGAGTTTCTATTGGTGGCCTGTGGGGCAAATGCGAATGACGA
ACGACATTTGTCACCGTTCTCAAAAAGCTTTTGTTGGGTGGGAAAATTCC
CTGGTTTTCCTACCTAAAAACGGTGGCGAGAAAAGATGCAACCACCCGAG
AAACAGACGCGCACACCGATTCCTCGCCCTCCTGCTCATGGATTGCCCTC
TATTCTTGAGACAGTGAGCTCCATGTTACTGAGCATCATTACCCTCCAGC
ATAGTTGCCCTTGGTGGCTTGTGTGGTAAATGCAAGGGACCAACGGCCAG
TTCGGCTGGAATTAAGCAGGCCTCGGGACGTTTTCTTAATTGGCCTAGGG
GTTTCTCCGCGAACCAGGCATAAAACCATTTCCTACCCACTTTTCTGAGA
CCATATGAACCGGCCTTAGCGGGTGATGTGCGCTGATAAATAGAGAACAC
GAGAAACTTCGACCTCACCGTCGGTGAGGGAAAGGGACGGCTGAACCCTT
CTCGCGACAAAAATCTTAGGCAAGCACCGCAGACAGGGGAGTGGGGGCCT
TGGGGAAAGGAATCCTTCTGTGTGCCCGCGGTTCAGTACTCCGGCAAGAT
GTCCTTGTGACAGGGAGCCCATCGAGCACTGGAAATAAATGTGACGAAGA
AAAAAAAAGGTGAGCTTCATCCCCCTCCTGCCAATCAATTCTATGTATTG
TAGTAACTCTTTGCTTTCGAACCTGGCTCTGAAACCTCAGACAGCGCTAG
GTAAAAACGCGGACGAAGAGCGGGCCGCGAGAGAAACGACGGCACAGCGG
CAGGATACGGGGCGACCAACACCAACAACGCCGACAGCGCCGCCAGAGAG
CAACCACCCTCCGCCAGCGGAGGCTCCTCAAACCGCCGCCGGTTCCGCCG
CCGCAGCCGCAGCCGCCGCTACCACGAGTACGCCGGGCACAAACAGCGGA
GGAGCACTCGCGTTCCACGCCGCCGCGGCCGCGGGGGACATCCTGTCCGT
CGAGGCTTACATAGCCCTCAACGCGGACAAGATTGCCAGGTCCAGAGCCG
TCAGCGACGGCGGCGGTCTGTTGTACGGAAAAGAAGCGGACACCGCCGCC
GGCGGCTTCGCGGCGGCGCTGCTGGTGGTGCCCGGGCCGAACA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7:15138..17280-

>mRNA_L-elsbetiae_contig7.15785.1 ID=mRNA_L-elsbetiae_contig7.15785.1|Name=mRNA_L-elsbetiae_contig7.15785.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=984bp|location=Sequence derived from alignment at L-elsbetiae_contig7:15138..17280- (Laminarionema elsbetiae ELsaHSoW15)
ACGGAGCAAGTGGTGAACACAGGACGCTGCAGGGAGATGAACCTCGTGAG
AGTTAGCGCTGTGGGTCATGGAGATTTCGGTCGGGATGAGACGGAGCAAG
TGGTGAACACAGGACGCTGCAGGGAGATGAACCTCGTGAGAGTTAGCGCT
GTGGGTCATGGAGATTTCGGTCGGGATGAGACAGCGCTAGGTAAAAACGC
GGACGAAGAGCGGGCCGCGAGAGAAACGACGGCACAGCGGCAGGATACGG
GGCGACCAACACCAACAACGCCGACAGCGCCGCCAGAGAGCAACCACCCT
CCGCCAGCGGAGGCTCCTCAAACCGCCGCCGGTTCCGCCGCCGCAGCCGC
AGCCGCCGCTACCACGAGTACGCCGGGCACAAACAGCGGAGGAGCACTCG
CGTTCCACGCCGCCGCGGCCGCGGGGGACATCCTGTCCGTCGAGGCTTAC
ATAGCCCTCAACGCGGACAAGATTGCCAGGTCCAGAGCCGTCAGCGACGG
CGGCGGTCTGTTGTACGGAAAAGAAGCGGACACCGCCGCCGGCGGCTTCG
CGGCGGCGCTGCTGGTGGTGCCCGGGCCGAACACAGCGCTAGGTAAAAAC
GCGGACGAAGAGCGGGCCGCGAGAGAAACGACGGCACAGCGGCAGGATAC
GGGGCGACCAACACCAACAACGCCGACAGCGCCGCCAGAGAGCAACCACC
CTCCGCCAGCGGAGGCTCCTCAAACCGCCGCCGGTTCCGCCGCCGCAGCC
GCAGCCGCCGCTACCACGAGTACGCCGGGCACAAACAGCGGAGGAGCACT
CGCGTTCCACGCCGCCGCGGCCGCGGGGGACATCCTGTCCGTCGAGGCTT
ACATAGCCCTCAACGCGGACAAGATTGCCAGGTCCAGAGCCGTCAGCGAC
GGCGGCGGTCTGTTGTACGGAAAAGAAGCGGACACCGCCGCCGGCGGCTT
CGCGGCGGCGCTGCTGGTGGTGCCCGGGCCGAAC
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