mRNA_L-elsbetiae_contig696.15735.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig696.15735.1
Unique NamemRNA_L-elsbetiae_contig696.15735.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig696.15735.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE)

HSP 1 Score: 198 bits (504), Expect = 3.080e-56
Identity = 162/266 (60.90%), Postives = 195/266 (73.31%), Query Frame = 3 
Query:   87 SLRFSPLKVPVIHMATNPGYETTLGALIEHGADVEAENGTQETTLHAAAWFNNAEAIDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLILAASKAGTQGAAEVVDYLLRAGADETIVKNDGRKASDVIGAAVEEEDRLADDIQRVRKLLANAPADRAWRRRGYLVLCRSHPDRVQQKNQVISGAHHIDAGRRTRSRAELAMVIGEVARDSTVNQNTGGDWAVVVTNVLQLQEEGIFRTIVGYL 884
            +LR +  K P  H A   G+   L A+IEHGADV+A +  Q T                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       L+ A  +AG QGAAEVV+ LLRAGADETI    G KA D+IG  VEEEDRL +D++RVR+LLANAPADRAWRRRGYL++CR+ PDRV ++ ++ SG H+ +  RRTRSRA++A   G +A +STV+++TGG+WAVVV+ V+ LQEEGIFRTIV YL
Sbjct:  137 TLRSTQFKCPATHAAALEGHVEILRAIIEHGADVDAVDAQQRTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSLLTPLMKAGRQAGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDRLTEDVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPER-RMTSGTHYTNVARRTRSRAKMARARG-IAGESTVDESTGGNWAVVVSKVISLQEEGIFRTIVEYL 400
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BLAST of mRNA_L-elsbetiae_contig696.15735.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 8.230e-28
Identity = 107/302 (35.43%), Postives = 134/302 (44.37%), Query Frame = 3 
Query:   12 TPLYLAASQGHVAATVALLAAGADVSLRFSPLKVPVIHMATNPGYETTLGALIEHGADVEAENGTQETTLHAAAWFNNAEAIDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLILAASKAGTQGAAEVVDYLLRAGADETIVKNDGRKASDVIGAAVEEEDRLADDIQRVRKLLANAPADRAWRRRGYLVLCRSH-PDRVQQKNQVISGAHHIDAGRRTRSRAELAMVIGEVARDSTVNQNTGGDWAVVVTNVL-------QLQEEG---IFRTIVGYL 884
            TPL+L A  G  AA  ALL AGADV+LR + + +                    HG DV A+     T L  A+ F+ A AIDV                                                   L L A+KAG+ G AE+VD LLR GADET V  +G  A+D++    EE D LA+D+ RVRKLLA APADRAWRRRG+L+L R+H P    Q     S A      +RTRS  E +    E+            DWA VV+ ++        L  +G   IF  IVGYL
Sbjct:  492 TPLHLVAMAGRAAAAQALLDAGADVALRQNGVGLSSXXXXXXXXXXXXXXXXXXHGGDVNAKVNNGITALRVASAFDKAPAIDVLTEAGANIEAQANGSTPLHVASQEGRLAAGIALLRHGASVGKKNAAAQTP-LHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRTRSSEEPSRA--EI------------DWAGVVSMLMGDGVDPISLMGDGANLIFEKIVGYL 778
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BLAST of mRNA_L-elsbetiae_contig696.15735.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 8.950e-27
Identity = 90/272 (33.09%), Postives = 117/272 (43.01%), Query Frame = 3 
Query:   78 ADVSLRFSPLKVPVIHMATNPGYETTLGALIEHGADVEAENGTQETTLHAAAWFNNAEAIDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---LILAASKAGTQGAAEVVDYLLRAGADETIVKNDGRKASDVIGAAVEEEDRLADDIQRVRKLLANAPADRAWRRRGYLVLCRSHPDRVQQKNQVISGAHHIDAGRRTRSRAELAMVIGEVARDSTVNQNTGGDWAVVVTNVLQLQEEGIFRTIVGYL 884
            AD++ R+   ++  + +    G+   +  LIEHGADV+A N      LH A   N  EA+DV                                                      L   A++AG QG  EVVD LLR GADET V  +G +A+D IG  V EEDR+ ++ + VRKLLANAPADRAWRRR  LVLCR+ PD++Q  +  I                                       A +   VL L EEGIFRTIV ++
Sbjct:  150 ADINRRYGDREISALDIGAGEGHVDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQLSSDRI---------------------------------------ARLEARVLGLVEEGIFRTIVRFI 382
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BLAST of mRNA_L-elsbetiae_contig696.15735.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 1.580e-26
Identity = 75/156 (48.08%), Postives = 98/156 (62.82%), Query Frame = 3 
Query:  426 AASKAGTQGAAEVVDYLLRAGADETIVKNDGRKASDVIGAAVEEED-RLADDIQRVRKLLANAPADRAWRRRGYLVLCRSHPDRVQQKNQVISGAHHIDAGRRTRSRAELAM--VIGEVARDSTVNQNTGGDWAVVVTNVLQLQEEGIFRTIVGYL 884
            AAS AG QG+AE+VD LLR GADET    +G++ +D +G  +E  D  L  ++  V +LLANAPADRAWRRRG LVLCR+   R + + Q   G       RRTRSRA+LA    +G   R  T    TG +W      V++L+EEGIFR++VG+L
Sbjct:  268 AASYAGRQGSAELVDLLLRRGADETTPDRNGQQPADRVGHCMELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLR-QEDGGDTRGGLSRRTRSRAKLARSDAVGAGCRRGTPEGGTGDEWRSASKRVVELEEEGIFRSVVGFL 422
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BLAST of mRNA_L-elsbetiae_contig696.15735.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 5.480e-26
Identity = 89/256 (34.77%), Postives = 117/256 (45.70%), Query Frame = 3 
Query:   12 TPLYLAASQGHVAATVALLAAGADVSLRFS--PLKVPVIHMATNPGYETTLGALIEHGADVEAENGTQETTLHAAAWFNNAEAIDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLILAASKAGTQGAAEVVDYLLRAGADETIVKNDGRKASDVIGAAVEEE--DRLADDIQRVRKLLANAPADRAWRRRGYLVLCRSHPDRVQQKNQVISGAHHIDAGRRTRSRAELAMVIG 767
            TPL+LA   GH++   ALLAA  D S+R+        V+ +A   G    L A+++HG DV        T+LH AA  N   AIDV                                                   LI+AA +AG QG   +VD LLR GADET +  DGR A++V+G  +E         D++RVR LL NAP DRAWRRRG+LVLCR+   + ++     S A     G R RS +  A + G
Sbjct:   73 TPLHLAVENGHLSTVKALLAADPDTSVRYRIWNRSYSVLDLAAQKGDACVLRAILQHGVDVNRRTDGY-TSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACINHCHEAALALYKHGSNIEARDIRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRAFWIKARRLRAASSNAS--SNGPRVRSLSTGARISG 325
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BLAST of mRNA_L-elsbetiae_contig696.15735.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 3.200e-24
Identity = 84/239 (35.15%), Postives = 108/239 (45.19%), Query Frame = 3 
Query:   12 TPLYLAASQGHVAATVALLAAGADVSLRFS--PLKVPVIHMATNPGYETTLGALIEHGADVEAENGTQETTLHAAAWFNNAEAIDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLILAASKAGTQGAAEVVDYLLRAGADETIVKNDGRKASDVIGAAVEEE--DRLADDIQRVRKLLANAPADRAWRRRGYLVLCRSHPDRVQQKNQVISGAHHI 716
            TPL+LA   GH++   ALLAA  D S+ +        V+  A   G    L A+++HG DV        T+LH AA  N   AIDV                                                   LI+AA +AG QG   +VD LLR GADET +  DGR A++V+G  +E         D++RVR LL NAPADRAWRRRG LVLCR+   + ++     S A  I
Sbjct:  122 TPLHLAVENGHLSTVKALLAADPDTSVHYRIWNRSYSVLDFAAQKGDACVLRAILQHGVDVNRRTDGY-TSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACSNHCHEAALALFKHGANIEARDMRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRAFWIKSRRLRAASSSARGI 359
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BLAST of mRNA_L-elsbetiae_contig696.15735.1 vs. uniprot
Match: D7G981_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G981_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 2.150e-22
Identity = 70/152 (46.05%), Postives = 88/152 (57.89%), Query Frame = 3 
Query:  438 AGTQGAAEVVDYLLRAGADETIVKNDGRKASDVIGAAVEEEDRLADDIQRVRKLLANAPADRAWRRRGYLVLCRSHPDRVQQKNQVISGAHHIDAGRRTRSRAELA---MVIGEVARDSTVNQNTGGDWAVVVTNVLQLQEEGIFRTIVGYL 884
            AG +GA EVVD LLR  ADET     G    +++G    E D +  ++QRV KLL  AP DRAWRRRG LVLCR+HP+R+  + Q  S        R TRSR +L     V G     +  +  T  +W+ +V  VL L +EGIFRTIVGYL
Sbjct:  250 AGDEGAVEVVDLLLRWNADETDDDAYGHTPGNIVGCMTPETDSMFVNVQRVWKLLQYAPQDRAWRRRGMLVLCRAHPERLGLR-QNASHVQESTVLRVTRSRTKLVEREQVAGGSGEGAAADGRTAREWSNMVYRVLGL-DEGIFRTIVGYL 399
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BLAST of mRNA_L-elsbetiae_contig696.15735.1 vs. uniprot
Match: A0A6H5JMJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMJ6_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 3.910e-19
Identity = 113/174 (64.94%), Postives = 127/174 (72.99%), Query Frame = 3 
Query:  156 LGALIEHGADVEAENGTQETTLHAAAWFNNAEAIDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLILAASKAGTQGAAEVVDYLLRAGADETIVKNDGRKASDVIGAAVEEEDRLADDIQRVRKLLANAPADRAWRRRGYLVLCRSHPDRV 677
            + A IE GA+V+A +  + T  H AA  NN E IDV  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   A + AG +G  EVVD LLR+GADETI+ ++GR A D+I   V       +   RVR LL NA ADRAW RR YLVLCR+HPDR 
Sbjct:    1 MSAAIERGAEVDAADAVERTPPHHAALLNNVEEIDVLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSATAVAGFEGDTEVVDSLLRSGADETILDSEGRAAVDMISWEVAGLHLSGEQDDRVRDLLVNAQADRAWHRRRYLVLCRTHPDRA 174
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BLAST of mRNA_L-elsbetiae_contig696.15735.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 6.400e-17
Identity = 64/145 (44.14%), Postives = 73/145 (50.34%), Query Frame = 3 
Query:  450 GAAEVVDYLLRAGADETIVKNDGRKASDVIGAAVEEEDRLADDIQRVRKLLANAPADRAWRRRGYLVLCRSHPDRVQQKNQVISGAHHIDAGRRTRSRAELAMVIGEVARDSTVNQNTGGDWAVVVTNVLQLQEEGIFRTIVGYL 884
            G+A+VVD LLR GADETIV   G  A+D IG          DD +R R LLA APADRAWRRRG LVLCR+HPDR+Q                                         GGD A +V  V  L+E G+FRTIV YL
Sbjct:  288 GSAQVVDLLLRWGADETIVSKQGETAADSIGTRRCHRTDPEDD-ERARSLLARAPADRAWRRRGLLVLCRAHPDRLQ----------------------------------------LGGDLAGLVAGVGGLEEVGVFRTIVLYL 391
[Close]
BLAST of mRNA_L-elsbetiae_contig696.15735.1 vs. uniprot
Match: A0A6H5JFR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR1_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 3.060e-16
Identity = 102/249 (40.96%), Postives = 141/249 (56.63%), Query Frame = 3 
Query:    6 QATPLYLAASQGHVAATVALLAAGADVSLRFSPLKVPVIHMATNPGYETTLGALIEHGADVEAENGTQETTLHAAAWFNNAEAIDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLILAASKAGTQGAAEVVDYLLRAGADETIVKNDGRKASDVIGAAVEEEDRLADDIQRVRKLLANAPADRAWRRRGYLVLCRSHPDRVQQKNQVISGAHHIDAGRRTRSRAEL 752
            + TPL+ A   GH+ +  AL+AAGA++++R    K  V+ +A   G    L AL+++GADV A +  ++  LH             XXXXXXXXXXXXXXXXXXXXXXXXXXX                         ++A SK   + +A VVD LLR GA ETIV    + A+ ++  +         D +RV KLL NAPADRAWRRRG+L+LCR++P+RV  +  + S +  +DA R T + A++
Sbjct:   43 ECTPLFGALLFGHLTSARALMAAGAEINVRCGLSKRTVLSLAAEKGDVDILRALVKNGADVTAVDNDRDMALHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQA----------------------VVALSKRARRTSA-VVDLLLRLGAHETIVDKRKKNAAGLLKKSWWS-CLYPGDAERVYKLLRNAPADRAWRRRGFLLLCRAYPERVPPR--LDSSSTLVDAARTTHNEAKV 265
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig696.15735.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KXK5_9PHAE3.080e-5660.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHY9_9PHAE8.230e-2835.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKL4_ECTSI8.950e-2733.09Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
D7FYD0_ECTSI1.580e-2648.08Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
D7G6X8_ECTSI5.480e-2634.77Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5KNU3_9PHAE3.200e-2435.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G981_ECTSI2.150e-2246.05Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
A0A6H5JMJ6_9PHAE3.910e-1964.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1U1_ECTSI6.400e-1744.14Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JFR1_9PHAE3.060e-1640.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig696contigL-elsbetiae_contig696:16902..18480 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score121.7
Seed ortholog evalue4.9e-25
Seed eggNOG ortholog2880.D7FYD0
KEGG koko:K21440
Hectar predicted targeting categoryother localisation
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons2
Model size1155
Cds size762
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig696.15735.1prot_L-elsbetiae_contig696.15735.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig696 17027..17788 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816771.2991042-UTR-L-elsbetiae_contig696:16901..170261622816771.2991042-UTR-L-elsbetiae_contig696:16901..17026Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig696 16902..17026 +
1691683800.927508-UTR-L-elsbetiae_contig696:16901..170261691683800.927508-UTR-L-elsbetiae_contig696:16901..17026Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig696 16902..17026 +
1622816771.3286545-UTR-L-elsbetiae_contig696:17788..177931622816771.3286545-UTR-L-elsbetiae_contig696:17788..17793Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig696 17789..17793 +
1691683800.9588926-UTR-L-elsbetiae_contig696:17788..177931691683800.9588926-UTR-L-elsbetiae_contig696:17788..17793Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig696 17789..17793 +
1622816771.3385162-UTR-L-elsbetiae_contig696:18217..184801622816771.3385162-UTR-L-elsbetiae_contig696:18217..18480Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig696 18218..18480 +
1691683800.9689677-UTR-L-elsbetiae_contig696:18217..184801691683800.9689677-UTR-L-elsbetiae_contig696:18217..18480Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig696 18218..18480 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816771.317373-CDS-L-elsbetiae_contig696:17026..177881622816771.317373-CDS-L-elsbetiae_contig696:17026..17788Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig696 17027..17788 +
1691683800.948462-CDS-L-elsbetiae_contig696:17026..177881691683800.948462-CDS-L-elsbetiae_contig696:17026..17788Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig696 17027..17788 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig696.15735.1

>prot_L-elsbetiae_contig696.15735.1 ID=prot_L-elsbetiae_contig696.15735.1|Name=mRNA_L-elsbetiae_contig696.15735.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=254bp
MATNPGYETTLGALIEHGADVEAENGTQETTLHAAAWFNNAEAIDVLVRA
GANIEACNHRGRTPFHLASGGLKRDVLPCLLKHGATVDAQDGFLQTPLIL
AASKAGTQGAAEVVDYLLRAGADETIVKNDGRKASDVIGAAVEEEDRLAD
DIQRVRKLLANAPADRAWRRRGYLVLCRSHPDRVQQKNQVISGAHHIDAG
RRTRSRAELAMVIGEVARDSTVNQNTGGDWAVVVTNVLQLQEEGIFRTIV
GYL*
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mRNA from alignment at L-elsbetiae_contig696:16902..18480+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig696.15735.1 ID=mRNA_L-elsbetiae_contig696.15735.1|Name=mRNA_L-elsbetiae_contig696.15735.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1579bp|location=Sequence derived from alignment at L-elsbetiae_contig696:16902..18480+ (Laminarionema elsbetiae ELsaHSoW15)
ACGAGCAAGCGACGCCGCTGTATCTAGCAGCCTCCCAGGGTCACGTGGCT
GCCACAGTGGCTCTCTTGGCTGCCGGCGCGGATGTCAGCCTCCGATTCAG
CCCGCTCAAGGTCCCAGTGATACACATGGCGACAAACCCGGGGTATGAGA
CGACCTTGGGGGCCTTGATCGAGCACGGGGCGGACGTGGAAGCTGAAAAC
GGAACACAAGAAACAACTCTTCATGCAGCCGCGTGGTTCAATAACGCCGA
GGCCATCGATGTGCTCGTCAGGGCTGGAGCCAACATCGAAGCATGCAATC
ATCGCGGCCGCACACCTTTTCATCTTGCTTCCGGTGGTCTCAAACGCGAC
GTCTTACCTTGCCTTTTGAAGCATGGTGCGACCGTTGACGCCCAGGATGG
TTTCCTCCAAACACCGTTGATACTTGCAGCATCTAAAGCCGGAACACAAG
GAGCTGCGGAGGTGGTGGATTATCTGCTGAGGGCGGGTGCGGACGAAACA
ATCGTTAAGAATGATGGCCGCAAAGCGTCCGATGTGATCGGGGCAGCTGT
CGAAGAAGAGGATCGTCTGGCCGATGATATCCAGCGCGTGCGCAAGCTGT
TGGCCAACGCTCCGGCCGACAGGGCATGGCGTCGCCGAGGCTACCTGGTG
TTGTGCCGTTCTCACCCGGACAGGGTGCAGCAGAAGAACCAGGTGATCAG
CGGCGCCCATCATATCGACGCAGGACGAAGGACTCGCAGCCGTGCCGAGC
TGGCGATGGTAATAGGGGAGGTCGCTAGGGACAGCACAGTGAATCAGAAT
ACCGGTGGCGACTGGGCTGTTGTCGTGACTAATGTGCTGCAGTTGCAGGA
GGAGGGCATATTCCGGACGATCGTGGGGTACCTCTGAAGCCGGTGAGTTG
AACCTGTGCAGCCATCCACCATACCATCGAGCATCACACTCAAACGACAA
GGTATGCCTTGGTTTCGAACAACCATGCGGTAGTGTGATAAAACTACAGA
TACCTCTTTATTTGTCGCGTTTTCCAAGGGGTGACAGCAGTTGTGCATCA
TATCAGGTGGGTTATTGTTGAGTTGTTTGGGGCTGGGTGCACCATTGGTT
CCTATGAATACTGCTCTCTCTGAGCTTGGGTCTCTCTGCAAATCGCAGGA
AGGGGCGGCGTAGAAGGTTGTTGTCGCTATATGAAGTGCTTTGGTGCCAC
CCGCTCATCATTGGTTTCCTAGAAGCCTCGATTTGTTGTAAATGGAACAG
CTTTGATTACTCGTCCATTCCGACCAGGCCTGAATTTGTTTTTGCTTGTC
CCCTCCCAAACACCAGGTCGATTGTTCAAGAACCCGAAAGCATCGATCAT
CTTGGTCCACGTAGGGTTAGATGCCATGGGCCTGACAAATGCCCGGTATA
CTTGAATATGTTCTGCCCCCCACCGGCTGAACCCCCCCATTAAAGGTGGA
AAGAAGACTGTTCGGGTATCGCTGAGGGTTCGGCGCTGTTTAGCAAAGAG
AAGAGGCGGTATGCGCTCGCCCAGGGGCAAGTGTGTGTGTGCGTGTGCCC
TTCCCATTTATTTTGGCGACAGTCCCCCC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig696:16902..18480+

>mRNA_L-elsbetiae_contig696.15735.1 ID=mRNA_L-elsbetiae_contig696.15735.1|Name=mRNA_L-elsbetiae_contig696.15735.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1524bp|location=Sequence derived from alignment at L-elsbetiae_contig696:16902..18480+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGACAAACCCGGGGTATGAGACGACCTTGGGGGCCTTGATCGAGCA
CGGGGCGGACGTGGAAGCTGAAAACGGAACACAAGAAACAACTCTTCATG
CAGCCGCGTGGTTCAATAACGCCGAGGCCATCGATGTGCTCGTCAGGGCT
GGAGCCAACATCGAAGCATGCAATCATCGCGGCCGCACACCTTTTCATCT
TGCTTCCGGTGGTCTCAAACGCGACGTCTTACCTTGCCTTTTGAAGCATG
GTGCGACCGTTGACGCCCAGGATGGTTTCCTCCAAACACCGTTGATACTT
GCAGCATCTAAAGCCGGAACACAAGGAGCTGCGGAGGTGGTGGATTATCT
GCTGAGGGCGGGTGCGGACGAAACAATCGTTAAGAATGATGGCCGCAAAG
CGTCCGATGTGATCGGGGCAGCTGTCGAAGAAGAGGATCGTCTGGCCGAT
GATATCCAGCGCGTGCGCAAGCTGTTGGCCAACGCTCCGGCCGACAGGGC
ATGGCGTCGCCGAGGCTACCTGGTGTTGTGCCGTTCTCACCCGGACAGGG
TGCAGCAGAAGAACCAGGTGATCAGCGGCGCCCATCATATCGACGCAGGA
CGAAGGACTCGCAGCCGTGCCGAGCTGGCGATGGTAATAGGGGAGGTCGC
TAGGGACAGCACAGTGAATCAGAATACCGGTGGCGACTGGGCTGTTGTCG
TGACTAATGTGCTGCAGTTGCAGGAGGAGGGCATATTCCGGACGATCGTG
GGGTACCTCTGAATGGCGACAAACCCGGGGTATGAGACGACCTTGGGGGC
CTTGATCGAGCACGGGGCGGACGTGGAAGCTGAAAACGGAACACAAGAAA
CAACTCTTCATGCAGCCGCGTGGTTCAATAACGCCGAGGCCATCGATGTG
CTCGTCAGGGCTGGAGCCAACATCGAAGCATGCAATCATCGCGGCCGCAC
ACCTTTTCATCTTGCTTCCGGTGGTCTCAAACGCGACGTCTTACCTTGCC
TTTTGAAGCATGGTGCGACCGTTGACGCCCAGGATGGTTTCCTCCAAACA
CCGTTGATACTTGCAGCATCTAAAGCCGGAACACAAGGAGCTGCGGAGGT
GGTGGATTATCTGCTGAGGGCGGGTGCGGACGAAACAATCGTTAAGAATG
ATGGCCGCAAAGCGTCCGATGTGATCGGGGCAGCTGTCGAAGAAGAGGAT
CGTCTGGCCGATGATATCCAGCGCGTGCGCAAGCTGTTGGCCAACGCTCC
GGCCGACAGGGCATGGCGTCGCCGAGGCTACCTGGTGTTGTGCCGTTCTC
ACCCGGACAGGGTGCAGCAGAAGAACCAGGTGATCAGCGGCGCCCATCAT
ATCGACGCAGGACGAAGGACTCGCAGCCGTGCCGAGCTGGCGATGGTAAT
AGGGGAGGTCGCTAGGGACAGCACAGTGAATCAGAATACCGGTGGCGACT
GGGCTGTTGTCGTGACTAATGTGCTGCAGTTGCAGGAGGAGGGCATATTC
CGGACGATCGTGGGGTACCTCTGA
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