mRNA_L-elsbetiae_contig6952.15724.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6952.15724.1 vs. uniprot
Match: D8LTS5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTS5_ECTSI) HSP 1 Score: 130 bits (328), Expect = 4.070e-33 Identity = 71/95 (74.74%), Postives = 77/95 (81.05%), Query Frame = 1 Query: 34 STARRMVESLEAVGFDAGVAPTAVLEIEGMMCQKSCGSTVRACLEAVPGVARAEVSFAGGRLARIWRELDGPRPPLLLPPSVLVGAVVDVGFGAR 318 + AR VE LEAVGFDA +AP+AVLEIEGMMCQKSCG+TVR CLEAVPGV RAEVS+A GRLAR+W DGPR LP SVLV AV DVGFGAR Sbjct: 229 AVARLAVEELEAVGFDASLAPSAVLEIEGMMCQKSCGTTVRGCLEAVPGVDRAEVSYAEGRLARVWAR-DGPR----LPVSVLVEAVEDVGFGAR 318
BLAST of mRNA_L-elsbetiae_contig6952.15724.1 vs. uniprot
Match: D8LTL7_ECTSI (Heavy metal translocating P-type ATPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTL7_ECTSI) HSP 1 Score: 85.5 bits (210), Expect = 3.440e-17 Identity = 48/89 (53.93%), Postives = 59/89 (66.29%), Query Frame = 1 Query: 49 MVESLEAVGFDAGVAPTAVLEIEGMMCQKSCGSTVRACLEAVPGVARAEVSFAGGRLARIWRELDGPRPPLLLPPSVLVGAVVDVGFGA 315 +V+++E +GF+A AP LE+ GMMCQ SCG+TVR LE V GV+RAEVSFA R AR+W G +LL LV AVV VGF A Sbjct: 204 LVDAIETIGFEAAEAPAVELEVSGMMCQNSCGTTVRQALENVAGVSRAEVSFAEKR-ARVWGSSGGG---VLLSTGTLVDAVVTVGFDA 288
BLAST of mRNA_L-elsbetiae_contig6952.15724.1 vs. uniprot
Match: A0A7S4A2N5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A2N5_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 2.190e-11 Identity = 41/79 (51.90%), Postives = 48/79 (60.76%), Query Frame = 1 Query: 82 AGVAPTAVLEIEGMMCQKSCGSTVRACLEAVPGVARAEVSFAGGRLARIWRELDGPRPPLLLPPSVLVGAVVDVGFGAR 318 A PT VL IEGMMCQ+SCGSTV L VPGV+RAE SFA A +W E+D ++L+ AV VGFGA Sbjct: 7 ASTPPTHVLTIEGMMCQQSCGSTVANALRNVPGVSRAEASFADHN-ASVWGEVDV---------ALLIDAVECVGFGAE 75
BLAST of mRNA_L-elsbetiae_contig6952.15724.1 vs. uniprot
Match: A0A7S2UWL7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWL7_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 4.840e-8 Identity = 33/71 (46.48%), Postives = 45/71 (63.38%), Query Frame = 1 Query: 58 SLEAVGFDA---------GVAPTAV-LEIEGMMCQKSCGSTVRACLEAVPGVARAEVSFAGGRLARIWREL 240 ++EAVGF+A G+ P + LE+EGMMCQK+CG+TV L + PGV A+VSFA A +W +L Sbjct: 50 AVEAVGFEAAEVSANGVAGICPQHLELEVEGMMCQKNCGTTVHKALSSTPGVVFAKVSFAESA-AYVWADL 119
BLAST of mRNA_L-elsbetiae_contig6952.15724.1 vs. uniprot
Match: A0A836CEY3_9STRA (Putative copper-transporting ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEY3_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 7.240e-8 Identity = 36/70 (51.43%), Postives = 39/70 (55.71%), Query Frame = 1 Query: 106 LEIEGMMCQKSCGSTVRACLEAVPGVARAEVSFAGGRLARIWRELDGPRPPLLLPPSVLVGAVVDVGFGA 315 L +EGMMCQK+CGSTV L +VPG RAEVSFA R AR W LV AV VGF A Sbjct: 24 LHVEGMMCQKNCGSTVHKALMSVPGTVRAEVSFAD-RQARAWGTAVA---------KALVDAVEGVGFDA 83
BLAST of mRNA_L-elsbetiae_contig6952.15724.1 vs. uniprot
Match: A0A7S1TRC9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRC9_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 1.180e-6 Identity = 33/75 (44.00%), Postives = 41/75 (54.67%), Query Frame = 1 Query: 94 PTAVLEIEGMMCQKSCGSTVRACLEAVPGVARAEVSFAGGRLARIWRELDGPRPPLLLPPSVLVGAVVDVGFGAR 318 P VLE++GMMC K+CGSTV L VPGV A V + +LA IW D + L+ AV +GF AR Sbjct: 8 PDVVLEVDGMMCMKNCGSTVEGALRRVPGVVEARVVYEL-KLACIWGTTDA---------AALMDAVDMMGFDAR 72
BLAST of mRNA_L-elsbetiae_contig6952.15724.1 vs. uniprot
Match: A0A7S3NIJ7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIJ7_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 1.190e-6 Identity = 35/73 (47.95%), Postives = 40/73 (54.79%), Query Frame = 1 Query: 97 TAVLEIEGMMCQKSCGSTVRACLEAVPGVARAEVSFAGGRLARIWRELDGPRPPLLLPPSVLVGAVVDVGFGA 315 T LEIEGMMCQ SCG+TV + L V GV AE S+A WR L ++LV AV VGFGA Sbjct: 4 TTRLEIEGMMCQASCGATVESALNDVIGVESAEASYARSEAIVKWRS------DTLKNENLLVDAVEAVGFGA 70
BLAST of mRNA_L-elsbetiae_contig6952.15724.1 vs. uniprot
Match: A0A2D4BDA3_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BDA3_PYTIN) HSP 1 Score: 54.7 bits (130), Expect = 2.140e-6 Identity = 34/70 (48.57%), Postives = 43/70 (61.43%), Query Frame = 1 Query: 106 LEIEGMMCQKSCGSTVRACLEAVPGVARAEVSFAGGRLARIWRELDGPRPPLLLPPSVLVGAVVDVGFGA 315 L IEGMMCQK+CG+TV+ L+ VPGV +A V+FA AR+ P + P L+ AV VGFGA Sbjct: 31 LVIEGMMCQKNCGTTVQNALKGVPGVDKAVVTFAT-HSARVTCA-----PEAGVTPDELIDAVESVGFGA 94
BLAST of mRNA_L-elsbetiae_contig6952.15724.1 vs. uniprot
Match: A0A0P1A8U0_PLAHL (Coppertransporting atpase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A8U0_PLAHL) HSP 1 Score: 52.8 bits (125), Expect = 1.050e-5 Identity = 32/67 (47.76%), Postives = 40/67 (59.70%), Query Frame = 1 Query: 37 TARRMVESLEAVGFDAGV-----------APTAVLEIEGMMCQKSCGSTVRACLEAVPGVARAEVSF 204 T +V+++E VGF A V + T L IEGMMCQK+CGSTV L++V GVA A VSF Sbjct: 64 TENDLVDAIEGVGFGAAVNILESENEKQRSLTVELLIEGMMCQKNCGSTVENALQSVKGVANAVVSF 130
BLAST of mRNA_L-elsbetiae_contig6952.15724.1 vs. uniprot
Match: A0A662Y8Q1_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y8Q1_9STRA) HSP 1 Score: 51.2 bits (121), Expect = 3.620e-5 Identity = 40/106 (37.74%), Postives = 50/106 (47.17%), Query Frame = 1 Query: 37 TARRMVESLEAVGFDAGVAPTAVLE-------------IEGMMCQKSCGSTVRACLEAVPGVARAEVSFAGGRLARIWRELDGPRPPLLLPPSVLVGAVVDVGFGA 315 TA +V+++E VGF A V T ++ +EGMMCQK+CG+TV L V GVA A V F RLA + G LV V VGF A Sbjct: 53 TASDLVDAVECVGFGAAVKDTTTMKTERETNPLEIALLVEGMMCQKNCGTTVENALRGVDGVASAAVDF-DRRLATVTLRSAGSTTL-----EELVDMVECVGFEA 152 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6952.15724.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6952.15724.1 >prot_L-elsbetiae_contig6952.15724.1 ID=prot_L-elsbetiae_contig6952.15724.1|Name=mRNA_L-elsbetiae_contig6952.15724.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=106bp VAAAAAELSLGSTARRMVESLEAVGFDAGVAPTAVLEIEGMMCQKSCGSTback to top mRNA from alignment at L-elsbetiae_contig6952:6781..7098+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6952.15724.1 ID=mRNA_L-elsbetiae_contig6952.15724.1|Name=mRNA_L-elsbetiae_contig6952.15724.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=318bp|location=Sequence derived from alignment at L-elsbetiae_contig6952:6781..7098+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6952:6781..7098+ >mRNA_L-elsbetiae_contig6952.15724.1 ID=mRNA_L-elsbetiae_contig6952.15724.1|Name=mRNA_L-elsbetiae_contig6952.15724.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=636bp|location=Sequence derived from alignment at L-elsbetiae_contig6952:6781..7098+ (Laminarionema elsbetiae ELsaHSoW15)back to top |