mRNA_L-elsbetiae_contig69.15666.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig69.15666.1
Unique NamemRNA_L-elsbetiae_contig69.15666.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig69.15666.1 vs. uniprot
Match: D7G0Y8_ECTSI (Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y8_ECTSI)

HSP 1 Score: 394 bits (1013), Expect = 3.180e-137
Identity = 195/248 (78.63%), Postives = 218/248 (87.90%), Query Frame = 1
Query:    1 ENITYRVGGLAITGAEAFLNSFGPTFSDYLNQTVGEVFPGVGFVAVPLAFEDVWPAVSSATVDFLFLNPSSASCMERQEAIHEFGAPAILSLRNFRQGNELNAFGGVLITAANRTDITDIMHLKDKIVEGVSITGLGAFQLQWGLLQDAGFNLMADPSELRLAYNQKKIVRDVIDGSVDVGFVRTDMVERMDAADLVPEWPLQVLPHVPAELSKEVVRALLGLNQTHEAAVAGKYSTWDAPLSYSSLR 744
            EN TYR+GGLAITG EAFL SF PTFS YLNQTVGEV+PGVGF+AVPLAF+DVW AVSSA+VDFLFLNP SASCME      EFG  AILSLRNFRQGNELN FGGV+ITAANR+DIT++ HL+DK+VEGVS++GLGAFQLQWGLLQD GFNLMAD  E+R AYNQKKIV DVI+ +VDVGFVRTDMVERMDAADLVPEWPLQ L HVP++L+KEVV ALL +N+THEAAV+G YSTWD PLSY+ LR
Sbjct:    4 ENKTYRIGGLAITGTEAFLESFEPTFSAYLNQTVGEVYPGVGFIAVPLAFDDVWDAVSSASVDFLFLNPGSASCMES-----EFGVSAILSLRNFRQGNELNLFGGVVITAANRSDITEVAHLQDKVVEGVSVSGLGAFQLQWGLLQDQGFNLMADTEEVRFAYNQKKIVYDVINENVDVGFVRTDMVERMDAADLVPEWPLQALSHVPSDLAKEVVGALLLINETHEAAVSGGYSTWDVPLSYADLR 246          
BLAST of mRNA_L-elsbetiae_contig69.15666.1 vs. uniprot
Match: A0A7S3YSR5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YSR5_9EUKA)

HSP 1 Score: 214 bits (545), Expect = 1.370e-60
Identity = 118/260 (45.38%), Postives = 156/260 (60.00%), Query Frame = 1
Query:   13 YRVGGLAITGAEAFLNSFGPTFSDYLNQTVGEVF-PGVGFVAVPLAFEDVWPAVSSATVDFLFLNPSSASCMERQEAIHEFGAPAILSLRNFRQGNELNAFGGVLITAANRTDITDIMHLKDKIVEGVSITGLGAFQLQWGLLQDAGFNLMADPSELRLAYNQKKIVRDVIDGSVDVGFVRTDMVERMDA-----------------------------ADLVPEWPLQVLPHVPAELSKEVVRALLGLNQTHEAAVAGK 702
            Y++GGLAI GA  F   F PTF DYLNQ VG +F P + F ++PL F   +  V + T+DF++ NPS+ SC++      EFGA A+L+LRN R+G EL  FGG++ T AN T+IT +  LKDK VE VSI+GLGA Q+QW L+ + G NLM DP+++R A+NQKKIV DV  G VDVGFVRTDM+E MDA                               L PEW L  LPH+ ++  K V   +  L +T+ ++   K
Sbjct:   46 YKIGGLAIRGAADFEKRFSPTFRDYLNQEVGPLFNPPITFESLPLNFSSTFTRVEAGTIDFVYTNPSAFSCLDS-----EFGASAVLTLRNLRRGQELTQFGGIIFTRANNTNITQLSDLKDKKVEAVSISGLGAAQMQWRLMTEKGMNLMVDPAQVRFAFNQKKIVHDVRRGDVDVGFVRTDMIEGMDANGETSLSYFKVIHKQNITYEGSPFPFQISTRLYPEWSLGALPHMNSDY-KVVEEVINALMRTNSSSNCSK 299          
BLAST of mRNA_L-elsbetiae_contig69.15666.1 vs. uniprot
Match: A0A7S4CND3_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CND3_9EUGL)

HSP 1 Score: 197 bits (500), Expect = 5.350e-60
Identity = 100/187 (53.48%), Postives = 131/187 (70.05%), Query Frame = 1
Query:   22 GGLAITGAEAFLNSFGPTFSDYLNQTVGEVFPGVGFVAVPLAFEDVWPAVSSATVDFLFLNPSSASCMERQEAIHEFGAPAILSLRNFRQGNELNAFGGVLITAANRTDITDIMHLKDKIVEGVSITGLGAFQLQWGLLQDAGFNLMADPSELRLAYNQKKIVRDVIDGSVDVGFVRTDMVERMDAA 582
            GGLAI GA  F+  + PT++ YLN+TVG+    + F AVP+ F + +  V S  +DF++ NPS+ SC+E      E+G   I+SLRNFR+G  LN FGG + T +NRTDI  I  L+DKIVE VSITGLGA Q+QW L+ + G N + DP+++  A+NQKKIVRDVI G+ DVGFVRTDM E MD+A
Sbjct:    1 GGLAIRGAADFMKRWEPTYATYLNETVGKAL-NISFEAVPMNFAETFDLVGSKAIDFIYTNPSAFSCVES-----EYGVAPIVSLRNFRKGFTLNQFGGTIFTRSNRTDINTIHDLRDKIVEAVSITGLGACQMQWRLMIEKGINFLVDPAQVVFAFNQKKIVRDVIAGNADVGFVRTDMAEGMDSA 181          
BLAST of mRNA_L-elsbetiae_contig69.15666.1 vs. uniprot
Match: A0A7S1T0N3_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T0N3_9CHLO)

HSP 1 Score: 193 bits (491), Expect = 3.300e-55
Identity = 113/268 (42.16%), Postives = 143/268 (53.36%), Query Frame = 1
Query:   16 RVGGLAITGAEAFLNSFGPTFSDYLNQTVGEVFPGVGFVAVPLAFEDVWPAVSSATVDFLFLNPSSASCMERQEAIHEFGAPAILSLRNFRQGNELNAFGGVLITAANRTDITDIMHLKDKIVEGVSITGLGAFQLQWGLLQDAGFNLMADPSELRLAYNQKKIVRDVIDGSVDVGFVRTDMVERMDAADLV--------------------------PEWPLQVLPHVPAELSKEVVRALLGLNQTHEAAVAGKYSTWDAPLSYSSL 741
            RVG L I G E     +  TFS YL  T G    G  F  V L F+  + A     VD L++NPS  SC+E Q     FGA    +L NFR+G +L+ F G + T ++R DI  +  LK KIVE VSI+GLGA QLQW  L   G + + DP ++R +YNQ+ IV+DVI G  DVG VRTD+ E M A  L+                          PEWPL  LPH   E+ +EV+ A+L L   HEAAV G YS W  P+SY  +
Sbjct:   37 RVGALGIKGEETLFAQWNATFSTYLTATAGAALGGRTFQLVYLDFDTAYEAAQHGCVDILYVNPSMYSCLELQ-----FGAAVFATLINFRRGYDLDRFYGTIFTRSDREDIRTVEDLKGKIVEAVSISGLGACQLQWHELLLNGVDFLIDPKQVRFSYNQELIVQDVIAGHADVGMVRTDLAEGMAAEGLINITDIRVINQKDDTDFPFPYSTRLAAPEWPLASLPHTSIEVIEEVMYAVLQLESDHEAAVQGLYSGWRLPVSYLGM 299          
BLAST of mRNA_L-elsbetiae_contig69.15666.1 vs. uniprot
Match: A0A7S0DIN8_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DIN8_9EUKA)

HSP 1 Score: 197 bits (502), Expect = 2.010e-54
Identity = 113/264 (42.80%), Postives = 151/264 (57.20%), Query Frame = 1
Query:   13 YRVGGLAITGAEAFLNSFGPTFSDYLNQTVGEVF-PGVGFVAVPLAFEDVWPAVSSATVDFLFLNPSSASCMERQEAIHEFGAPAILSLRNFRQGNELNAFGGVLITAANRTDITDIMHLKDKIVEGVSITGLGAFQLQWGLLQDAGFNLMADPSELRLAYNQKKIVRDVIDGSVDVGFVRTDMVERM-----------------------------DAADLVPEWPLQVLPHVPAELSKEVVRALLGLNQTHEAAVAGKYSTW 714
            +++GGLAI G   F   F PTFS YL +TVG  F P + F ++ L F   +  V  A+VDF++ NPS+ SC+E      EF   AI++LRNFRQGNEL  FGG++ T ++  +I  I  L+ KIVE VSI+GLGA Q+QW LLQD G++LM  P ++R A+NQKKIV DV++G+ DVGFVRTDM+E M                              + +L PEW L +LPHV  +      R    L   H+   A K  T+
Sbjct:   39 WKIGGLAIRGPTDFHARFSPTFSTYLTETVGPQFNPPIRFESIALDFSSTFTQVEQASVDFIYTNPSAFSCLES-----EFDVSAIVTLRNFRQGNELTRFGGIIFTRSDNDEINAIADLEGKIVEAVSISGLGAAQMQWKLLQDKGYSLMTLPKQVRFAFNQKKIVLDVLNGNADVGFVRTDMIEGMASKGEVNISSFKVIHQQNMTYEGRRFPFLSSTELYPEWSLGMLPHVGIDYMVSE-RVAFALMDIHKDHWAAKNGTY 296          
BLAST of mRNA_L-elsbetiae_contig69.15666.1 vs. uniprot
Match: A0A812P169_9DINO (TtrS protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812P169_9DINO)

HSP 1 Score: 178 bits (452), Expect = 1.740e-47
Identity = 108/273 (39.56%), Postives = 152/273 (55.68%), Query Frame = 1
Query:   16 RVGGLAITGAEAFLNSFGPTFSDYLNQTVGEVFPGVGFVAVPLAFEDVWPAVSSATVDFLFLNPSSASCMERQEAIHEFGAPAILSLRNFRQGNELNAFGGVLITAANRTDITDIMHLKDKIVEGVSITGLGAFQLQWGLLQDAGFNLMADPSELRLAYNQKKIVRDVIDGSVDVGFVRTDMVERMDAA-------------------------DLVPEWPLQVLPHVPAELSKEVVRALLGLN------QTHEAAVAGKYSTWDAPLSYSSL 741
            ++GGLAI GA AF NS GPTF DYL + +     G+ F A+PL F   +  V +  VDF+F NP++ +CM    A+ EF    + SL N+R+GN L  F GV+ T  +    T +  L++  VE VSI+GLGA QLQ   L   G ++M D  +L  A+NQ KIV+DV  G  DVGFVRTD+++R  AA                         D  PEWP+  LPHV AE+++ V  +L+ L+      +  E A+AG +++W  P++Y  L
Sbjct:   40 QIGGLAIQGAAAFENSLGPTFQDYLTRRLN-ASKGLEFEAIPLDFNQNFELVGAGQVDFIFSNPAAYTCM----AV-EFNLRTVASLINYRKGNALGQFAGVIFTRQDSPFHT-VDDLRNATVEAVSISGLGAMQLQQAELLSQGLDIMTDVPQLIFAFNQNKIVQDVELGLADVGFVRTDLIDRNVAANKTKWEYFRVIGQIADSDFPFARSTDFTPEWPIGALPHVHAEVTELVASSLMSLDRFSPDPELSEPAIAGNFASWSTPMNYFGL 305          
BLAST of mRNA_L-elsbetiae_contig69.15666.1 vs. uniprot
Match: A0A812RNW9_9DINO (TtrS protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812RNW9_9DINO)

HSP 1 Score: 177 bits (448), Expect = 6.140e-47
Identity = 107/272 (39.34%), Postives = 152/272 (55.88%), Query Frame = 1
Query:   19 VGGLAITGAEAFLNSFGPTFSDYLNQTVGEVFPGVGFVAVPLAFEDVWPAVSSATVDFLFLNPSSASCMERQEAIHEFGAPAILSLRNFRQGNELNAFGGVLITAANRTDITDIMHLKDKIVEGVSITGLGAFQLQWGLLQDAGFNLMADPSELRLAYNQKKIVRDVIDGSVDVGFVRTDMVERMDAA-------------------------DLVPEWPLQVLPHVPAELSKEVVRALLGLN------QTHEAAVAGKYSTWDAPLSYSSL 741
            +GGLAI GA AF  S GPTF DYL + +   + G+ F ++PL F   +  V +  VDF++ NP++ +CM    A+ EF    + SL N+R+GN L  F GV+ T  +    T +  L++ IVE VSI+GLGA QLQ   L   G ++M D   L  A+NQ KIV+DV  G  DVGFVRTD+++R  AA                         D  PEWP+  LPHV AE+++ V R+L+ L+      +  E A+AG +++W  P++Y  L
Sbjct:  506 IGGLAIQGAAAFETSLGPTFKDYLTRRLNASY-GLEFESIPLDFNQNFEFVGAGQVDFIYSNPAAYTCM----AV-EFNLRTVASLINYRKGNALGQFAGVIFTRHDSPFHT-VDDLRNAIVEAVSISGLGAMQLQQAELLSQGLDIMTDVPRLVFAFNQNKIVQDVELGLADVGFVRTDLIDRNVAANKTKWEYFRVIGQIADTDFPFARSTDFTPEWPIGALPHVHAEVTELVARSLMSLDRFSPDPELSEPAIAGNFASWSTPMNYFGL 770          
BLAST of mRNA_L-elsbetiae_contig69.15666.1 vs. uniprot
Match: F2UDV5_SALR5 (Guanylate cyclase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UDV5_SALR5)

HSP 1 Score: 174 bits (442), Expect = 3.700e-46
Identity = 104/275 (37.82%), Postives = 147/275 (53.45%), Query Frame = 1
Query:   13 YRVGGLAITGAEAFLNSFGPTFSDYLNQTVGEVF-PGVGFVAVPLAFEDVWPAVSSATVDFLFLNPSSASCMERQEAIHEFGAPAILSLRNFRQGNELNAFGGVLITAANRTDITDIMHLKDKIVEGVSITGLGAFQLQWGLLQDAGFNLMADPSELRLAYNQKKIVRDVIDGSVDVGFVRTDMVERMDAAD------------------------------LVPEWPLQVLPHVPAELSKEVVRALLGLNQTHEAAVAGKYSTWDAPLSYSSLR 744
            Y VG L   G + F   F   FS YL  T G  F P V F A+P+AF D   +VS   +DF + NP+  SC+E  E +    AP +L++RNFR G+EL  F GV+ TAA+R DI  +  ++ K + GVS+T LG FQ+Q+G+L  AG  LM D + +  + N ++ V DV++G+ D+GFVRTD +E M A+                               L PEWP    P V  ++ + V++AL  LN +   +V G+Y+ W    SY SLR
Sbjct:   33 YTVGVLNNKGVDYFEEHFKEGFSTYLTNTAGRTFNPPVTFNAIPVAFSDFVNSVSKGELDFTYCNPTLFSCIESGEEM----AP-LLTVRNFRLGHELTVFAGVIFTAASRDDINTLEDVRGKRLSGVSMTSLGGFQMQYGMLHVAGIELMTDFAMVAFSSNHRQTVHDVLEGAADIGFVRTDTIEGMIASGAIEADSLKVLNARESLTPEGTKFPFVHSTPLYPEWPFGAHPSVDWQVQEAVMKALQSLNASSPTSVQGQYAEWQPGFSYISLR 302          
BLAST of mRNA_L-elsbetiae_contig69.15666.1 vs. uniprot
Match: A0A7S0GWB4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GWB4_9EUKA)

HSP 1 Score: 162 bits (411), Expect = 2.090e-45
Identity = 90/266 (33.83%), Postives = 140/266 (52.63%), Query Frame = 1
Query:   19 VGGLAITGAEAFLNSFGPTFSDYLNQTVGEVF-PGVGFVAVPLAFEDVWPAVSSATVDFLFLNPSSASCMERQEAIHEFGAPAILSLRNFRQGNELNAFGGVLITAANRTDITDIMHLKDKIVEGVSITGLGAFQLQWGLLQDAGFNLMADPSELRLAYNQKKIVRDVIDGSVDVGFVRTDMVERMD-----------------------------AADLVPEWPLQVLPHVPAELSKEVVRALLGLNQTHEAAVAGKYSTWDAPL 726
            +GGLA  GA  F+  F PTF DYLN+ V   F   + F  +PL+  +++ AV    VDFLF NPS  SC+E +  I   GA    ++R  R G++++  GGV+   A+R DI +++ ++ KI+EG  ++ L   + QW        + M  PS+LR  ++Q   + DV+ G VD+G +RTD++E M                              +  L PEWP  +L H   ++S+ VV AL+ +++T   ++ G Y+TW APL
Sbjct:   32 IGGLANHGANNFVKQFKPTFVDYLNREVSSYFLTPISFEILPLSSTEIYTAVEKKQVDFLFCNPSIFSCLESENGI-AVGA----TIRQLRLGHQISVSGGVIFARADRHDINELVDIEGKILEGEELSSLSGSKTQWETFFLNNISYMNWPSQLRFGHSQNNTIYDVLSGKVDIGLIRTDLLEEMKTEGKINIDDIKIIHHVNYTVDQHGFPFELSTHLYPEWPFSILEHTDWQVSQHVVEALMRIDETMNQSIIGGYATWQAPL 292          
BLAST of mRNA_L-elsbetiae_contig69.15666.1 vs. uniprot
Match: A0A7S3X170_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3X170_9SPIT)

HSP 1 Score: 159 bits (403), Expect = 5.450e-45
Identity = 91/200 (45.50%), Postives = 124/200 (62.00%), Query Frame = 1
Query:    1 ENITYRVGGLAITGAEAFLNSFGPTFSDYLNQTVGEVFPGVGFVAVPLAFEDVWPAVSSATVDFLFLNPSSASCMERQEAIHEFGAPAILSLRNFRQGNELNAFGGVLITAANRTDITDIMHLKDKIVEGVSITGLGAFQLQWGLLQDAGFNLMADPSELRLAYNQKKIVRDVIDGSVDVGFVRTDMVERMDAADLVPEW 600
            +N   ++GGLAI+GA AF +SF P FS+YL  TV     G+ F A+PL F+  + +VS   VD+++ NP+ + C+     + EFG  ++ SL N+R GN L+ F GV+ + A+ ++ + +  L+   VE VSI GLGA QLQ   L   G N+M D   L  AYNQ KIVRDV DG  DVGFVRTDM++R   A  V EW
Sbjct:   36 QNCRVQIGGLAISGAAAFSSSFNPVFSEYLT-TVLNASRGLEFEAIPLDFDQTFASVSGVDVDYIYSNPAVSVCL-----MVEFGVMSVGSLLNYRAGNSLDKFAGVIFSRAD-SNFSTVEDLRQARVEAVSIAGLGAMQLQQAALLQQGINIMTDVHRLEFAYNQGKIVRDVRDGFADVGFVRTDMIDRQVLAGNV-EW 227          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig69.15666.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0Y8_ECTSI3.180e-13778.63Diguanylate cyclase/phosphodiesterase with PAS/PAC... [more]
A0A7S3YSR5_9EUKA1.370e-6045.38Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
A0A7S4CND3_9EUGL5.350e-6053.48Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A7S1T0N3_9CHLO3.300e-5542.16Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
A0A7S0DIN8_9EUKA2.010e-5442.80Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A812P169_9DINO1.740e-4739.56TtrS protein n=1 Tax=Symbiodinium natans TaxID=878... [more]
A0A812RNW9_9DINO6.140e-4739.34TtrS protein n=1 Tax=Symbiodinium natans TaxID=878... [more]
F2UDV5_SALR53.700e-4637.82Guanylate cyclase n=1 Tax=Salpingoeca rosetta (str... [more]
A0A7S0GWB4_9EUKA2.090e-4533.83Hypothetical protein (Fragment) n=1 Tax=Amorphochl... [more]
A0A7S3X170_9SPIT5.450e-4545.50Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig69contigL-elsbetiae_contig69:48491..52561 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score397.5
Seed ortholog evalue4.6e-108
Seed eggNOG ortholog2880.D7G0Y8
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ABC transporter, phosphonate, periplasmic substrate-binding protein
EggNOG OGs2CY75@1,2S2HA@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size747
Cds size747
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig69.15666.1prot_L-elsbetiae_contig69.15666.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig69 48491..52561 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816764.4242454-CDS-L-elsbetiae_contig69:48490..485301622816764.4242454-CDS-L-elsbetiae_contig69:48490..48530Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig69 48491..48530 +
1691683795.784363-CDS-L-elsbetiae_contig69:48490..485301691683795.784363-CDS-L-elsbetiae_contig69:48490..48530Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig69 48491..48530 +
1622816764.4348633-CDS-L-elsbetiae_contig69:48886..490911622816764.4348633-CDS-L-elsbetiae_contig69:48886..49091Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig69 48887..49091 +
1691683795.7991216-CDS-L-elsbetiae_contig69:48886..490911691683795.7991216-CDS-L-elsbetiae_contig69:48886..49091Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig69 48887..49091 +
1622816764.4448068-CDS-L-elsbetiae_contig69:49804..499311622816764.4448068-CDS-L-elsbetiae_contig69:49804..49931Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig69 49805..49931 +
1691683795.8087833-CDS-L-elsbetiae_contig69:49804..499311691683795.8087833-CDS-L-elsbetiae_contig69:49804..49931Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig69 49805..49931 +
1622816764.4579637-CDS-L-elsbetiae_contig69:50086..502181622816764.4579637-CDS-L-elsbetiae_contig69:50086..50218Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig69 50087..50218 +
1691683795.8180587-CDS-L-elsbetiae_contig69:50086..502181691683795.8180587-CDS-L-elsbetiae_contig69:50086..50218Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig69 50087..50218 +
1622816764.4676764-CDS-L-elsbetiae_contig69:51267..513461622816764.4676764-CDS-L-elsbetiae_contig69:51267..51346Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig69 51268..51346 +
1691683795.829048-CDS-L-elsbetiae_contig69:51267..513461691683795.829048-CDS-L-elsbetiae_contig69:51267..51346Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig69 51268..51346 +
1622816764.479487-CDS-L-elsbetiae_contig69:52397..525611622816764.479487-CDS-L-elsbetiae_contig69:52397..52561Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig69 52398..52561 +
1691683795.838013-CDS-L-elsbetiae_contig69:52397..525611691683795.838013-CDS-L-elsbetiae_contig69:52397..52561Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig69 52398..52561 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig69.15666.1

>prot_L-elsbetiae_contig69.15666.1 ID=prot_L-elsbetiae_contig69.15666.1|Name=mRNA_L-elsbetiae_contig69.15666.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=249bp
ENITYRVGGLAITGAEAFLNSFGPTFSDYLNQTVGEVFPGVGFVAVPLAF
EDVWPAVSSATVDFLFLNPSSASCMERQEAIHEFGAPAILSLRNFRQGNE
LNAFGGVLITAANRTDITDIMHLKDKIVEGVSITGLGAFQLQWGLLQDAG
FNLMADPSELRLAYNQKKIVRDVIDGSVDVGFVRTDMVERMDAADLVPEW
PLQVLPHVPAELSKEVVRALLGLNQTHEAAVAGKYSTWDAPLSYSSLR*
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mRNA from alignment at L-elsbetiae_contig69:48491..52561+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig69.15666.1 ID=mRNA_L-elsbetiae_contig69.15666.1|Name=mRNA_L-elsbetiae_contig69.15666.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4071bp|location=Sequence derived from alignment at L-elsbetiae_contig69:48491..52561+ (Laminarionema elsbetiae ELsaHSoW15)
GAGAACATCACCTATCGTGTGGGTGGACTAGCTATTACCGGTGCGGGCTC TGCAAAGGCGCGAATTTGTCGCAACGTACATAGAGCAACTTTGTTTTCCC ATTTCCAGCGGGCGTAGCACCGGGCAAGTGCACTACAGGCCATGCCTGCA GGTGCAGCTTTACGTTCCCCTAAAAAAATACGAAGCCTGTAGAGGGTGAA ACATAATGTGCTGTAAAAATGCCCTGCATCCCATCCGGTGTGGAACATGA AGCTCCGCATAATAGGAGACCAAGAATCTCAACCGTACATAAGAATGCAA AACGTTCCTATAGAGCTCGAGCTGCTTTCCAATGTTCGGATCTTGGCGCA GTGCAGTGCCCTTCTCCTCATCTTCTCGCGATACTCTACTACTCAGGTGC CGAGGCCTTTCTAAATTCGTTCGGGCCAACGTTCAGTGACTACCTGAACC AGACCGTCGGCGAGGTATTCCCCGGCGTTGGCTTCGTGGCCGTCCCCCTG GCATTCGAAGATGTATGGCCCGCAGTCTCGTCGGCAACAGTGGACTTCTT GTTCCTGAATCCCAGCTCTGCTAGTTGCATGGAAAGGCAAGAGGCAATAC AGTACCGGTTGTATTGCTCATGTGGGCTGCATCAGCATGTGTGTACGGTT TACTTTGTGTTCCTCGGGGTCAGAGCCAGGTTGAAGAAGCCGCCTTGACT TTCTTGGATTTTTTCGCCGCATGCGGGTTGTTTCATATGCTGGTATGTTT TATCTTTTATAAAGAATTTGTTTTGCCACTGTTGGAAGTGGAACGAATTC CGGCAGCTTTTTTGTCTCGCTAGTACAAAGCCATATTTTTCCACTACGAA CTTCACATCTGTACCAGCGGATAAAGAACCCTCGCACAACAACGATGCGG CCGGTTACTCGACATGACAGCAAAACAACATGTAGCTTGTACTCTAACGC CTGAATATTTAATTTCGATATTGCATCCAGTGGAAACAAACAACTACAGG CACCTACATGTGTCAACAAAAATGTTACTACTATTGAATCTCAGAAGCCG TCCCTACCCCAGCGCCTTTTGTCTCTCTGAGTACACAGCCGTATTGTTTC GTTGAAAGCGTCACATCTGTAACAACGGGTAATACAACTCTCGCAAGAAC GAAGTCGCTGATGACTCGACATGTCAGCAAATCAAACAAAAGGCAGCTTA CACTGTGCCATGAGTTTAACTTCGATTGAGTGCATCTTGGCAGAACAATA TCCCGATAGACACCCTGTAGAGCTTAAAACATCCCGAATTCAACTTCTAT GCGATGGATGGCAGCGAGTTTGGAGCCCCTGCTATTCTATCGCTGAGGAA CTTTCGGCAAGGAAATGAGCTGAACGCGTTCGGCGGGGTGCTGATCACGG CCGCAAATAGGACCGACATCACGGACATCATGCATCTCAAGGTAAGCACT CTCTGTTACACGCGTTGAATTATCATGCGAGTACACGTTCTAATCTATGT TCTGCACTATGTTTCTTGGGTTAATGGGGTTAGAAGTAACCCACACAGCA CATGTTTCCCACCTACAAATCAACTGCCATTCAATCGAACGTCCAGGACA AAATTGTTGAGGGTGTCTCGATCACCGGTTTGGGTGCATTTCAGCTCCAG TGGGGCTTGCTTCAAGATGCGGGATTCAACCTCATGGCGGACCCTTCCGA GCTTCGGCTAGCGTACAACCAAAAAAAGGTGGGTCAGTTTCGAATGATAC TGTTGCTGCTGTTTCGGTCTGCGTGCGCTCTTGTTCCTACGCAAAAACCG GAGAGTATGCTTTGTTAAGGCGGCGGTGAGGGGGGCCTATTGATCAGTAT AGGTATTTTTCCAGAAAAAAAATCGATGACCCGCGCTGAACATGACAGAG CCTAATTCGAAGTTGGTGTGAGCTTTCCCAAAACGCCCGCATGTTCTGAC ATTTCTGCCAAAACCCAGAGGTATTCCGAGATTGTCGGCTCTTCCTTGCC GTACTTTTGCGCAGTGTCCAGGCCGTATTCTAACCAACCCCCTGCGCGTT GGAAATGTTAGGCCCGTGAAAATTCACTGTGCATATTCCACACTCTTCCA AAACAGCCGGGCTTCATTCAAGTCGATTTTTTCTTGATCGGGGCGAAAAC CACGGTGTGAGACTCCGACGTGTGGACCCAATATTTACGCCCGATTAACC GAAAGAAGAGCGGTTGAAAAATCGTTCGTGTGCGCCAGACCATCGAACAG GCTTGTAGCTTCCTATTGCTGCTACCATGCGGTGGCCTCTACCCACTATA TCAGTAGGCCTTTCAAGAATCCTCCACCGTTCTTGCCTGTGAGGGGCCGA GCTATCTAGTCTGCTGAACACCAAGCTTGGTTAGAGGTTACCTCACAGTC CCTTTAAAAAAAGTGACGTTTGTATCTACATCGCTCTCCCAAGGAAACTA AAACAAGTCGCGAACCTGCTCTCTGTAGAGAACTGCAAACTCTTGCATTG GAGTGTGTCGAGGGGTTTAGCAGCGGGGCGCTGAGGGCCGAACTGGGGGG TGTGGCGCGTTTGGGACGACCCGTGCTATCAGTTTCAGCATGCCCAAAAC AAACCGGATTCAAAAATTCAATCACATCGTGCTCGCCACTGAACCCCTGG ATAAAATAACAATAGATGTGGAGAGCTCCTCATCATCCCTTCAAGAATGT TAAAAATTAGTCCGATCCGTTAGTACCCGTGGCATTCTTGGGCCCCTTTC ACACACGGCTTGTATTTCGAACCACAGATCGTTCGCGACGTTATCGACGG GAGCGTTGACGTTGGCTTCGTAAGGACGGACATGGTCGAGCGGATGGACG CCGCAGGTACAACCGCCATTTTCCATCCATCGTGTGTGTCACCTTGCTGC TACACTGCAAAGTATCCACGAGGGTGTTTACTGCATTTGACGTCTACGAC GAAGCAGAATAAGGTGGAAAAATAGTGATCAGCGCCAAGCTTTCGGGCTC AAGCCCTCGATTTCGTCGCTTAGCCTCCGATCCCGAATCCACATCATCCA CATTTCTTCTGCCAACACACCCGCGTACGGTCCTAAACACATAAAGAAGC ACTCGACTACAATATAGTGGATGAGTTTCTCAGCGTTCGAGGAACAGCCT CCGTGGGTCACCTTAGACAGGAGGGCGTCATGAAACAGGGTTTTCGGAAA CACCTCTCTTCACTGACGCAGCGCCCAATAAGCCTAGAGACAACCAGAAC AAGTCGAGAAGTTGGCCCTGGAGATGATGTATTTGCTTCAACATGCATGC GTGATAAACATTGCTACATACACACCGGCACACACTCCTTGACTGGCTGA AACGTGCGGTTGATTGAATTTGCGAAGTTCTACCCCGAGGATGTGTTGAT TGTGTTCGCACCGGCAAATCATCTCGAGAAAAACTCAATCTAAACGGTTT AGTTTTATACCCAGACGAAACTCAACTTTCTTGCACCCAAAGTTTTTGTT TTTCACTCTCATTTAACCACGAACACCGGGCTCACCATAATAATAGGTGA AGCTAACTTGTCGGACGTCAGCTTCCTTTTTGTGCGAGAAGATATAGCTG CCAGCGGATTTCCTTTCCCATCGGCCACAGGTAGGCGCATCAATGTTGTC CCCCCCATAAAAGGGACTCGAAGTGGTAATACAAAAAGTGGCATTGTGAT GTAAGAGGAAGGTGCGCGAATAGTGTGGGAGCATTTGAGCGCGTGGCAAC ACGAAGTCTAACTGCGGCGATCGTTGCCTCGAGGTTGCTTGAGCAACCGC AGCGAGGCCTGATTTAAACCCCTTCGCCCAAACAAAAAGGACATACTTCC TGCCTGTGCAACCTCAGCATCGCCCACCCCGCCTGTCCATCCTTCGACGC GGTAAAGATTTGGTACCAGAATGGCCCCTGCAGGTACTGCCACACGTCCC CGCGGAACTCAGCAAGGAAGTAGTGCGCGCCTTGCTGGGACTCAACCAGA CCCACGAGGCCGCTGTTGCCGGTAAATACTCCACGTGGGACGCGCCCTTA TCCTACTCCTCCCTCAGGTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig69:48491..52561+

>mRNA_L-elsbetiae_contig69.15666.1 ID=mRNA_L-elsbetiae_contig69.15666.1|Name=mRNA_L-elsbetiae_contig69.15666.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1494bp|location=Sequence derived from alignment at L-elsbetiae_contig69:48491..52561+ (Laminarionema elsbetiae ELsaHSoW15)
GAGAACATCACCTATCGTGTGGGTGGACTAGCTATTACCGGAGAACATCA
CCTATCGTGTGGGTGGACTAGCTATTACCGGTGCCGAGGCCTTTCTAAAT
TCGTTCGGGCCAACGTTCAGTGACTACCTGAACCAGACCGTCGGCGAGGT
ATTCCCCGGCGTTGGCTTCGTGGCCGTCCCCCTGGCATTCGAAGATGTAT
GGCCCGCAGTCTCGTCGGCAACAGTGGACTTCTTGTTCCTGAATCCCAGC
TCTGCTAGTTGCATGGAAAGGCAAGAGGCAATACAGTGCCGAGGCCTTTC
TAAATTCGTTCGGGCCAACGTTCAGTGACTACCTGAACCAGACCGTCGGC
GAGGTATTCCCCGGCGTTGGCTTCGTGGCCGTCCCCCTGGCATTCGAAGA
TGTATGGCCCGCAGTCTCGTCGGCAACAGTGGACTTCTTGTTCCTGAATC
CCAGCTCTGCTAGTTGCATGGAAAGGCAAGAGGCAATACACGAGTTTGGA
GCCCCTGCTATTCTATCGCTGAGGAACTTTCGGCAAGGAAATGAGCTGAA
CGCGTTCGGCGGGGTGCTGATCACGGCCGCAAATAGGACCGACATCACGG
ACATCATGCATCTCAAGCGAGTTTGGAGCCCCTGCTATTCTATCGCTGAG
GAACTTTCGGCAAGGAAATGAGCTGAACGCGTTCGGCGGGGTGCTGATCA
CGGCCGCAAATAGGACCGACATCACGGACATCATGCATCTCAAGGACAAA
ATTGTTGAGGGTGTCTCGATCACCGGTTTGGGTGCATTTCAGCTCCAGTG
GGGCTTGCTTCAAGATGCGGGATTCAACCTCATGGCGGACCCTTCCGAGC
TTCGGCTAGCGTACAACCAAAAAAAGGACAAAATTGTTGAGGGTGTCTCG
ATCACCGGTTTGGGTGCATTTCAGCTCCAGTGGGGCTTGCTTCAAGATGC
GGGATTCAACCTCATGGCGGACCCTTCCGAGCTTCGGCTAGCGTACAACC
AAAAAAAGATCGTTCGCGACGTTATCGACGGGAGCGTTGACGTTGGCTTC
GTAAGGACGGACATGGTCGAGCGGATGGACGCCGCAGATCGTTCGCGACG
TTATCGACGGGAGCGTTGACGTTGGCTTCGTAAGGACGGACATGGTCGAG
CGGATGGACGCCGCAGATTTGGTACCAGAATGGCCCCTGCAGGTACTGCC
ACACGTCCCCGCGGAACTCAGCAAGGAAGTAGTGCGCGCCTTGCTGGGAC
TCAACCAGACCCACGAGGCCGCTGTTGCCGGTAAATACTCCACGTGGGAC
GCGCCCTTATCCTACTCCTCCCTCAGGTGAATTTGGTACCAGAATGGCCC
CTGCAGGTACTGCCACACGTCCCCGCGGAACTCAGCAAGGAAGTAGTGCG
CGCCTTGCTGGGACTCAACCAGACCCACGAGGCCGCTGTTGCCGGTAAAT
ACTCCACGTGGGACGCGCCCTTATCCTACTCCTCCCTCAGGTGA
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