mRNA_L-elsbetiae_contig6873.15630.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6873.15630.1 vs. uniprot
Match: D8LKD1_ECTSI (Aardvark n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD1_ECTSI) HSP 1 Score: 75.9 bits (185), Expect = 2.030e-11 Identity = 72/84 (85.71%), Postives = 78/84 (92.86%), Query Frame = 1 Query: 4 SALGEADACDAVAMVMSMFPDHRLIQVEACRAVEALADANNDNVRLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNLFNGE 255 SALGEADAC+AVA VMSMFP+HR +QVEACRAVEALAD +NV+L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNLF+GE Sbjct: 55 SALGEADACNAVATVMSMFPEHRQVQVEACRAVEALADGTEENVQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNLFSGE 138 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6873.15630.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6873.15630.1 >prot_L-elsbetiae_contig6873.15630.1 ID=prot_L-elsbetiae_contig6873.15630.1|Name=mRNA_L-elsbetiae_contig6873.15630.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=318bp MRRRGDGDVHVSGPQADSGGGVQGCRGSGGREQRQRPAPGRGGLLPAGGGback to top mRNA from alignment at L-elsbetiae_contig6873:172..7920+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6873.15630.1 ID=mRNA_L-elsbetiae_contig6873.15630.1|Name=mRNA_L-elsbetiae_contig6873.15630.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7749bp|location=Sequence derived from alignment at L-elsbetiae_contig6873:172..7920+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6873:172..7920+ >mRNA_L-elsbetiae_contig6873.15630.1 ID=mRNA_L-elsbetiae_contig6873.15630.1|Name=mRNA_L-elsbetiae_contig6873.15630.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1908bp|location=Sequence derived from alignment at L-elsbetiae_contig6873:172..7920+ (Laminarionema elsbetiae ELsaHSoW15)back to top |