mRNA_L-elsbetiae_contig6804.15568.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6804.15568.1
Unique NamemRNA_L-elsbetiae_contig6804.15568.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6804.15568.1 vs. uniprot
Match: D7FYF7_ECTSI (DRP, dynamin-related protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF7_ECTSI)

HSP 1 Score: 336 bits (861), Expect = 8.060e-109
Identity = 183/253 (72.33%), Postives = 202/253 (79.84%), Query Frame = 1
Query:    1 LSEELGALEQLRALLQGNEEVSILGVVVAGAQSAGKSSVLEALGGMKLPRGQNITTRVPLILSLVAVPGVEPHAIIGGDADLAKNGKKIEIDNVSAEIERLTNELAGDGSAVTGMPIHLKLLRPSGPTLTLIDLPGITHNSADGTQDIHTETVDLVKKYISEDNMVILVVIPAMDDFANAEALSLAKEYDPHGRRTLGVVTKTDDVRAGCNIKAKLRMEPGHVDLSLGFIAVVNRTPIEVKEDTPAEMVRARE 759
            LS ELGALEQLRALLQ NEEV I GVVVAGAQSAGKSSVLEALGGMKLPRGQNITTRVPL+LSLVAVPG EPHA+IGG ADL+K GK I ID +S +IERLTNELAGDG+AV+  PI+LK++RPSGPTLTLIDLP ITHNS DGTQDIHTETV+LVKK+I  DNMVILVVIPAMDDFANAEA++LAK+YDP GRRTLGVVTKTD+++                                V+EDTPAE VRARE
Sbjct:   15 LSGELGALEQLRALLQNNEEVKIPGVVVAGAQSAGKSSVLEALGGMKLPRGQNITTRVPLVLSLVAVPGAEPHAVIGGQADLSK-GKIIGIDEISTDIERLTNELAGDGTAVSAKPIYLKIIRPSGPTLTLIDLPDITHNSPDGTQDIHTETVNLVKKFIENDNMVILVVIPAMDDFANAEAIALAKKYDPDGRRTLGVVTKTDNIK--------------------------------VEEDTPAEEVRARE 234          
BLAST of mRNA_L-elsbetiae_contig6804.15568.1 vs. uniprot
Match: A0A812V0V8_9DINO (DRP4C protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812V0V8_9DINO)

HSP 1 Score: 179 bits (454), Expect = 1.520e-50
Identity = 106/251 (42.23%), Postives = 157/251 (62.55%), Query Frame = 1
Query:    1 LSEELGALEQLRALLQGNEEVSILGVVVAGAQSAGKSSVLEALGGMKLPRGQNITTRVPLILSLVAVPGV-EPHAIIGGDADLAKNGKKIEIDNVSAEIERLTNELAGDGSAVTGMPIHLKLLRPSGPTLTLIDLPGITHNSADGTQDIHTETVDLVKKYISEDNMVILVVIPAMDDFANAEALSLAKEYDPHGRRTLGVVTKTDDVR--AGCNIKAKLRME-PGHVDLSLGFIAVVNRTPIEVKEDTPAE 741
            +S++LG +E +R + Q   ++ + GVVV G QSAGKSS+LE + G++ PR QN  TR+P +L+++  P V E  A++  D+    + K+  + +V   I++LT++     + ++   ++++++R  GP L+LIDLPG+THN A+   +IH  TV LVK+YI  + MVIL VIPAM DF NAE + LA+EYDP G RTLGVVTK DD       +I  K+ M     V L+ GF  VVNR+   + E    E
Sbjct:   24 VSKKLGLMESVRHVCQA-VQIPLPGVVVVGEQSAGKSSLLENISGIQFPRAQNTCTRMPCVLTMLTDPTVNESFALVSMDSSFT-DAKRCAVADVEGRIKQLTDQHTTGAAFISREALYIRVVRRDGPQLSLIDLPGVTHN-AEKMSNIHEVTVSLVKEYIEPEEMVILCVIPAMSDFGNAEVVKLAREYDPEGIRTLGVVTKCDDAANAEASDIVEKVTMSRDSDVRLAFGFHCVVNRSQKNIDEGMSRE 271          
BLAST of mRNA_L-elsbetiae_contig6804.15568.1 vs. uniprot
Match: A0A8J2ELG6_9DINO (Hypothetical protein (Fragment) n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J2ELG6_9DINO)

HSP 1 Score: 172 bits (435), Expect = 2.680e-50
Identity = 93/187 (49.73%), Postives = 122/187 (65.24%), Query Frame = 1
Query:   61 VSILGVVVAGAQSAGKSSVLEALGGMKLPRGQNITTRVPLILSLVAVPGVEPHAIIGGDADLAKNGKKIEIDNVSAEIERLTNELAGDGSAVTGMPIHLKLLRPSGPTLTLIDLPGITHNSADGTQDIHTETVDLVKKYISEDNMVILVVIPAMDDFANAEALSLAKEYDPHGRRTLGVVTKTDDVR 621
            + + GVVV G QSAGKSSVLEA+ G+  PRG+N  TR P IL +    G  P     G+A    N  +I +  +  EI+RLT + AG GS++   PIH+K+++ SGPTLTLIDLPGITH   +   DIH   V L++ YI+ + MVIL V+PA+ DF N EAL LAKE D  G RT+GVV+K D ++
Sbjct:    1 IEVPGVVVIGDQSAGKSSVLEAISGINFPRGENTCTRRPAILRMETRCGNAP-----GEASDLHNAVRIPLTEIGGEIQRLTRDKAGPGSSIIADPIHIKVVQDSGPTLTLIDLPGITHVH-ESQSDIHDVIVGLLRTYIANEQMVILAVVPAVSDFGNCEALKLAKEVDAEGERTVGVVSKIDQIQ 181          
BLAST of mRNA_L-elsbetiae_contig6804.15568.1 vs. uniprot
Match: A0A813LGD8_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813LGD8_POLGL)

HSP 1 Score: 184 bits (468), Expect = 6.590e-50
Identity = 105/247 (42.51%), Postives = 157/247 (63.56%), Query Frame = 1
Query:    1 LSEELGALEQLRALLQGNEEVSILGVVVAGAQSAGKSSVLEALGGMKLPRGQNITTRVPLILSLVAVPGV-EPHAIIGGDADLAKNGKKIEIDNVSAEIERLTNELAGDGSAVTGMPIHLKLLRPSGPTLTLIDLPGITHNSADGTQDIHTETVDLVKKYISEDNMVILVVIPAMDDFANAEALSLAKEYDPHGRRTLGVVTKTDDV---RAGCNIKAKLRMEPGHVDLSLGFIAVVNRTPIEVKED 729
            LS++LG LE++R + Q   ++++ GVVV G QSAGKSS+LE + G++ PR QN  TR+P IL+++  P + EP+A +  D+   +  ++  +  V  +I  LT + A   + ++   ++++++R  GP L+LIDLPG+THN AD   DIH  TV LV++Y+  + +VIL VIPAM DF NAE + LA++YDP G+RTLGVVTK DD     A   +   L      V L LGF  VVNR+   + ++
Sbjct:  121 LSKKLGLLERVRHVCQA-VQIALPGVVVVGEQSAGKSSLLENISGIQFPRAQNTCTRMPCILTMLTDPSILEPYAKVSMDSSF-EGAEQCAVGEVEEKIRALTAQHATGDTFISRKALYVRVVRKDGPQLSLIDLPGVTHN-ADKMADIHEVTVSLVEEYVRHEEVVILCVIPAMSDFGNAEVIKLARKYDPEGKRTLGVVTKCDDAARAEASDVVDKTLMRRDSDVQLKLGFHCVVNRSQKNIDDN 364          
BLAST of mRNA_L-elsbetiae_contig6804.15568.1 vs. uniprot
Match: A0A812KZ97_9DINO (DRP4C protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812KZ97_9DINO)

HSP 1 Score: 182 bits (461), Expect = 1.160e-48
Identity = 109/251 (43.43%), Postives = 158/251 (62.95%), Query Frame = 1
Query:    1 LSEELGALEQLRALLQGNEEVSILGVVVAGAQSAGKSSVLEALGGMKLPRGQNITTRVPLILSLVAVPGV-EPHAIIGGDADLAKNGKKIEIDNVSAEIERLTNELAGDGSAVTGMPIHLKLLRPSGPTLTLIDLPGITHNSADGTQDIHTETVDLVKKYISEDNMVILVVIPAMDDFANAEALSLAKEYDPHGRRTLGVVTKTDDVR--AGCNIKAKLRM-EPGHVDLSLGFIAVVNRTPIEVKEDTPAE 741
            +S++LG  E +R + Q   ++ + GVVV G QSAGKSS+LE + G++ PR QN  TR+P IL+++  P V E +A++  D+    + ++  + +V  +I+RLT   A   + ++   ++++++R  GP L+LIDLPG+THN A+   +IH  TVDLVK+YI  + MVIL VIPAM DF NAE + LA+EYDP G RTLGVVTK DD       +I  K+ M     V L+ GF  VVNR+   + E    E
Sbjct:  344 VSKKLGLFESVRHVCQA-VQIPLPGVVVVGEQSAGKSSLLENISGIQFPRAQNTCTRMPCILTMLTDPTVSESYALVSMDSSFG-DAQQCAVPDVEGQIKRLTEMHATGEAFISRQALYVRVVRRDGPQLSLIDLPGVTHN-AEKMSNIHEVTVDLVKEYIEPEEMVILCVIPAMSDFGNAEVVKLAREYDPDGIRTLGVVTKCDDAANAEASDIVEKVTMARDSDVRLAFGFHCVVNRSQKNIDEGMSRE 591          
BLAST of mRNA_L-elsbetiae_contig6804.15568.1 vs. uniprot
Match: R7QG75_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG75_CHOCR)

HSP 1 Score: 178 bits (451), Expect = 3.060e-48
Identity = 113/245 (46.12%), Postives = 151/245 (61.63%), Query Frame = 1
Query:    1 LSEELGALEQLRALLQGNEEVSILGVVVAGAQSAGKSSVLEALGGMKLPRGQNITTRVPLILSLVAVPGVE-PHAIIGGD----ADLAKNGKKIEIDNVSAEIERLTNE-LAGDGSAVTGMPIHLKLLRPSGPTLTLIDLPGITHNSADGTQDIHTETVDLVKKYISEDNMVILVVIPAMDDFANAEALSLAKEYDPHGRRTLGVVTKTDDV-RAGCNIKAKLRMEPGH-VDLSLGFIAVVNRTP 711
            ++  LG +E+LR LL G+E +   G+VV GAQS+GKSSVLE L  +  PR  N  TRVP+I+ L     V  P A I GD     D+     K +I N    I  LT + L    S V   PIH++ +R  GP +TLIDLPGITH+  +G +DIH  T D+VKKY+  +NM+ LVVIPA DDF N+EAL +AK +D  G RTLGV++K D V     +I  K++M P + + L LG+IA+ N+ P
Sbjct:    1 MARRLGVIEKLRKLL-GSEGIPCPGIVVVGAQSSGKSSVLERLTDIAFPRDTNTCTRVPIIVQLQRDASVTLPTATICGDEHFETDVINCSTKQDITNA---IHDLTEKALVSTRSRVVDKPIHIRYVRSKGPVMTLIDLPGITHDDGEG-RDIHGITADIVKKYLKYENMIALVVIPANDDFGNSEALKIAKTFDTTGARTLGVISKCDLVPEQHSDIVEKIQMTPSNAIKLGLGYIAIRNKGP 240          
BLAST of mRNA_L-elsbetiae_contig6804.15568.1 vs. uniprot
Match: A0A812NNR0_9DINO (DRP4C protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812NNR0_9DINO)

HSP 1 Score: 177 bits (449), Expect = 2.660e-47
Identity = 105/246 (42.68%), Postives = 152/246 (61.79%), Query Frame = 1
Query:    1 LSEELGALEQLRALLQGNEEVSILGVVVAGAQSAGKSSVLEALGGMKLPRGQNITTRVPLILSLVAVPGVE-PHAIIGGDADLAKNGKKIEIDNVSAEIERLTNELAGDGSAVTGMPIHLKLLRPSGPTLTLIDLPGITHNSADGTQDIHTETVDLVKKYISEDNMVILVVIPAMDDFANAEALSLAKEYDPHGRRTLGVVTKTDDV---RAGCNIKAKLRMEPGHVDLSLGFIAVVNRTPIEVKE 726
            LS++LG  E++R +     E+ + GVVV G QSAGKSS+LE++ G++ PR QN  TR+P +L+++  P  + P+A++  D      G    +  V  +I++LT + A     ++   + ++++R  GP L+LIDLPG+THN A+  ++IH  TV LV++YI  D MVIL VIPAM DF NAE + LAK+YDP G RTLGVVTK DD     A   ++  L      + L LGF  VVNR+   + E
Sbjct:   16 LSKKLGLFERVRHVCNA-VEIPLPGVVVVGEQSAGKSSLLESISGIQFPRSQNTCTRMPCVLTMLTDPATDDPYALVSMDPSFEDAGP-CPVMQVEGKIKQLTEKHATGDDFISKQALFVRVVRKEGPQLSLIDLPGVTHN-AECMENIHEVTVALVEEYIKPDEMVILCVIPAMSDFGNAEVVKLAKKYDPDGIRTLGVVTKCDDAAHAEASDVVEKVLMRRETDMRLQLGFHCVVNRSQKNIDE 258          
BLAST of mRNA_L-elsbetiae_contig6804.15568.1 vs. uniprot
Match: A0A815G6I8_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A815G6I8_9BILA)

HSP 1 Score: 174 bits (440), Expect = 1.880e-46
Identity = 104/250 (41.60%), Postives = 155/250 (62.00%), Query Frame = 1
Query:   13 LGALEQLRALLQGNEEVSILGVVVAGAQSAGKSSVLEALGGMKLPRGQNITTRVPLILSLVAVPGVEPHAIIGGDADLAKNGKKIEIDNVSAEIERLTNELAGDGSAVTGMPIHLKLLRPSGPTLTLIDLPGITHNSADG-TQDIHTETVDLVKKYISEDNMVILVVIPAMDDFANAEALSLAKEYDPHGRRTLGVVTKTDDVRAGCNIKAKLRMEPGHVDLSLGFIAVVNRTPIEVKEDTPAEMVRARE 759
            L AL+ +R +L   E++++  +VVAG QS GKSSVLEAL G++LPR QNI TR PL L L        +A I    +  +  K  ++D++S  ++RLT  LAGDG  V+  PI+L + + + P LTLIDLPGIT N   G ++DI+ + + L+ KYI  +  ++L VIPA  DF  +E++ ++K YDP G+R L  V+K D    G   K + +  PG + L  G +AV+NR+P E++E+   E ++ RE
Sbjct:   38 LDALDLMREILN-EEKINLPEIVVAGDQSVGKSSVLEALSGIQLPRAQNICTRCPLELRLKNSMNDAEYATIRCKGE--EEEKITDLDDISQYVKRLTQTLAGDGVNVSSDPIYLTVYKQNIPDLTLIDLPGITRNPLPGQSKDIYKQIITLIDKYIQPETAIVLHVIPASVDFTTSESVKISKNYDPEGKRQLIAVSKIDKFDKGIGEKLQGK-GPGSMKLEFGCVAVLNRSPEEIEEEISFEEMKQRE 283          
BLAST of mRNA_L-elsbetiae_contig6804.15568.1 vs. uniprot
Match: A0A812N278_9DINO (DRP4C protein (Fragment) n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812N278_9DINO)

HSP 1 Score: 170 bits (431), Expect = 1.140e-44
Identity = 105/251 (41.83%), Postives = 155/251 (61.75%), Query Frame = 1
Query:    1 LSEELGALEQLRALLQGNEEVSILGVVVAGAQSAGKSSVLEALGGMKLPRGQNITTRVPLILSLVAVPGV-EPHAIIGGDADLAKNGKKIEIDNVSAEIERLTNELAGDGSAVTGMPIHLKLLRPSGPTLTLIDLPGITHNSADGTQDIHTETVDLVKKYISEDNMVILVVIPAMDDFANAEALSLAKEYDPHGRRTLGVVTKTDDVR--AGCNIKAKLRME-PGHVDLSLGFIAVVNRTPIEVKEDTPAE 741
            +S++LG +E +R + Q   ++ + GVVV G QSAGKSS+LE + G++ PR QN  TR+P IL+++  P V E  A++  D+    + K+  + +V  +I+ LT++ A   + ++   ++++++R  GP L+LI   G+THN A+   +IH  TV LVK+YI  + MVIL VIPAM DF NAE + LA+EYDP G RTLGVVTK DD       +I  K+ M     V L+ GF  VVNR+   + E    E
Sbjct:   13 VSKKLGLMESVRHVCQA-VQIPLPGVVVVGEQSAGKSSLLENISGIQFPRAQNTCTRMPCILTMLTDPTVNESFALVSMDSSFT-DAKRCAVADVEGQIKELTDQHATGAAFISRQALYIRVVRRDGPQLSLI---GVTHN-AEKMSNIHEVTVSLVKEYIEPEEMVILCVIPAMSDFGNAEVVKLAREYDPEGIRTLGVVTKCDDAANAEASDIVEKVTMSRDSDVRLAFGFHCVVNRSQKNIDEGMSRE 257          
BLAST of mRNA_L-elsbetiae_contig6804.15568.1 vs. uniprot
Match: A0A8J2AD55_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J2AD55_9DINO)

HSP 1 Score: 170 bits (430), Expect = 1.320e-44
Identity = 107/264 (40.53%), Postives = 153/264 (57.95%), Query Frame = 1
Query:    1 LSEELGALEQLRALLQGNEEVSILGVVVAGAQSAGKSSVLEALGGMKLPRGQNITTRVPLILSLVAVPGV----EPHAIIG-GDADLAKNGKKIEIDNVSAEIERLTNELA---GDGSAVTGMPIHLKLLRPSGPTLTLIDLPGIT--HNSADGTQDIHTETVDLVKKYISEDNMVILVVIPAMDDFANAEALSLAKEYDPHGRRTLGVVTKTDDVRAGCNIKAKLRME-PGHVDLSLGFIAVVNRTPIEVKEDTPAEMVRARE 759
            L   L  +E +R  L+ +E+V + GV+V G QSAGKSSVLEA+ G+  PRG+N  TR   I+ L   P       P+A++   DA+  +  K  +   +  +I+ LT +L      G+ +    I++ +   SGPT+TLIDLPG+T  H +    ++IH  TV+L++KYI  +  VIL VIPA +DF N EAL+LA E DP G RTLGV TK D +    ++  KL M     + L LGF+ V  R P EVK++ P + +  RE
Sbjct:   91 LRNRLEVIEGIRGDLE-SEDVEVPGVIVVGNQSAGKSSVLEAISGINFPRGENTCTRCASIVRLECHPAEAQDDRPYALLSCNDAEQKQAQKIYDFAKIGQQIDALTKKLGEGRDSGTILGDDVIYITVRNKSGPTMTLIDLPGLTFVHKTQ---KNIHDVTVELIRKYIKNEQAVILAVIPATEDFGNCEALNLASEVDPEGERTLGVATKCDMISEDSDLVQKLTMSRSSDIKLKLGFVGVRCRGPAEVKDNLPFDQMAVRE 350          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6804.15568.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYF7_ECTSI8.060e-10972.33DRP, dynamin-related protein n=1 Tax=Ectocarpus si... [more]
A0A812V0V8_9DINO1.520e-5042.23DRP4C protein n=1 Tax=Symbiodinium necroappetens T... [more]
A0A8J2ELG6_9DINO2.680e-5049.73Hypothetical protein (Fragment) n=1 Tax=Amoebophry... [more]
A0A813LGD8_POLGL6.590e-5042.51Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A812KZ97_9DINO1.160e-4843.43DRP4C protein n=1 Tax=Symbiodinium natans TaxID=87... [more]
R7QG75_CHOCR3.060e-4846.12Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A812NNR0_9DINO2.660e-4742.68DRP4C protein n=1 Tax=Symbiodinium natans TaxID=87... [more]
A0A815G6I8_9BILA1.880e-4641.60Hypothetical protein n=1 Tax=Didymodactylos carnos... [more]
A0A812N278_9DINO1.140e-4441.83DRP4C protein (Fragment) n=1 Tax=Symbiodinium sp. ... [more]
A0A8J2AD55_9DINO1.320e-4440.53Hypothetical protein n=1 Tax=Amoebophrya sp. A120 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6804contigL-elsbetiae_contig6804:9474..10624 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score337.4
Seed ortholog evalue5.7e-90
Seed eggNOG ortholog2880.D7FYF7
KEGG koko:K14754,ko:K17065
KEGG Pathwayko04139,ko04214,ko04217,ko04621,ko04668,ko05162,ko05164,ko05165,map04139,map04214,map04217,map04621,map04668,map05162,map05164,map05165
Hectar predicted targeting categoryother localisation
GOsGO:0000266,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006996,GO:0007005,GO:0008017,GO:0008092,GO:0008150,GO:0009987,GO:0015631,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0044424,GO:0044464,GO:0048285,GO:0071840
EggNOG free text desc.mitochondrial fission
EggNOG OGsCOG0699@1,KOG0446@2759
EC3.6.5.5
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03029,ko04131,ko04147
Exons2
Model size759
Cds size759
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816754.1654017-CDS-L-elsbetiae_contig6804:9473..99681622816754.1654017-CDS-L-elsbetiae_contig6804:9473..9968Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6804 9474..9968 +
1691683788.2219424-CDS-L-elsbetiae_contig6804:9473..99681691683788.2219424-CDS-L-elsbetiae_contig6804:9473..9968Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6804 9474..9968 +
1622816754.181527-CDS-L-elsbetiae_contig6804:10360..106241622816754.181527-CDS-L-elsbetiae_contig6804:10360..10624Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6804 10361..10624 +
1691683788.233014-CDS-L-elsbetiae_contig6804:10360..106241691683788.233014-CDS-L-elsbetiae_contig6804:10360..10624Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6804 10361..10624 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6804.15568.1prot_L-elsbetiae_contig6804.15568.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6804 9474..10624 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6804.15568.1

>prot_L-elsbetiae_contig6804.15568.1 ID=prot_L-elsbetiae_contig6804.15568.1|Name=mRNA_L-elsbetiae_contig6804.15568.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=253bp
LSEELGALEQLRALLQGNEEVSILGVVVAGAQSAGKSSVLEALGGMKLPR
GQNITTRVPLILSLVAVPGVEPHAIIGGDADLAKNGKKIEIDNVSAEIER
LTNELAGDGSAVTGMPIHLKLLRPSGPTLTLIDLPGITHNSADGTQDIHT
ETVDLVKKYISEDNMVILVVIPAMDDFANAEALSLAKEYDPHGRRTLGVV
TKTDDVRAGCNIKAKLRMEPGHVDLSLGFIAVVNRTPIEVKEDTPAEMVR
ARE
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mRNA from alignment at L-elsbetiae_contig6804:9474..10624+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6804.15568.1 ID=mRNA_L-elsbetiae_contig6804.15568.1|Name=mRNA_L-elsbetiae_contig6804.15568.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1151bp|location=Sequence derived from alignment at L-elsbetiae_contig6804:9474..10624+ (Laminarionema elsbetiae ELsaHSoW15)
CTAAGTGAAGAGCTAGGAGCGCTCGAGCAGCTCCGCGCACTGCTACAGGG AAACGAAGAAGTATCGATCCTTGGCGTGGTGGTGGCTGGGGCGCAGAGTG CAGGAAAGTCCTCCGTCTTGGAGGCCCTGGGTGGCATGAAGCTGCCCCGG GGGCAGAACATCACCACTCGGGTACCGCTCATTCTCAGTCTGGTGGCCGT TCCGGGTGTGGAACCCCACGCCATCATCGGCGGGGACGCCGATCTCGCCA AGAATGGTAAGAAGATCGAAATAGACAACGTATCGGCGGAGATCGAACGG CTCACGAATGAGCTCGCGGGCGATGGCTCCGCCGTCACCGGCATGCCGAT TCACCTCAAGCTTCTTCGTCCCTCTGGTCCCACCCTGACACTCATCGATC TTCCTGGCATCACCCACAACTCTGCGGATGGCACACAGGACATTCACACC GAAACAGTCGATCTTGTCAAGAAGTACATTTCGGAAGACAACATGGTGAG ATTATAGATAGGGAAACCGTCATCGAATATTGGATATATCGAAGATGCAT GCACCTGTGGCTCTCTGATGTTGATTTTATTTTTATGTGCCCCTCTTGTT AGCTCGGGCATGTGTAAAGCAAAACACCAACACCACCGTAGAACGGTCTG GTGCTGTTTGGCCGTTTAAGCTTGCAATTTTCGTGTTGTCGAACGGTTGC GGTGGCTGTGCTGTTGCCTTCCACTTGTCCGTATATCGTCTTGAGTCGGA AAACGGACGATGCCGGGACACACTTCTGCTGTGCGGTTTTTCGGATGGTC CTATTTTCCATCCCAGCTCAATTTCTATATTATATATTCTTCCCGCCGTT CTAATTAATTCCACCCTTCGACCCGCCCGCGCACTAGGTGATCCTCGTCG TCATTCCAGCCATGGATGACTTCGCCAACGCGGAGGCTCTTTCACTCGCT AAGGAGTACGATCCCCATGGCCGGCGCACGCTCGGTGTCGTTACCAAGAC CGACGACGTCAGGGCTGGCTGCAACATCAAGGCTAAGCTTCGTATGGAAC CCGGGCATGTCGATCTAAGCCTTGGATTCATCGCGGTGGTCAACCGCACG CCGATTGAGGTGAAGGAAGACACGCCGGCCGAAATGGTACGCGCTCGCGA G
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6804:9474..10624+

>mRNA_L-elsbetiae_contig6804.15568.1 ID=mRNA_L-elsbetiae_contig6804.15568.1|Name=mRNA_L-elsbetiae_contig6804.15568.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1518bp|location=Sequence derived from alignment at L-elsbetiae_contig6804:9474..10624+ (Laminarionema elsbetiae ELsaHSoW15)
CTAAGTGAAGAGCTAGGAGCGCTCGAGCAGCTCCGCGCACTGCTACAGGG
AAACGAAGAAGTATCGATCCTTGGCGTGGTGGTGGCTGGGGCGCAGAGTG
CAGGAAAGTCCTCCGTCTTGGAGGCCCTGGGTGGCATGAAGCTGCCCCGG
GGGCAGAACATCACCACTCGGGTACCGCTCATTCTCAGTCTGGTGGCCGT
TCCGGGTGTGGAACCCCACGCCATCATCGGCGGGGACGCCGATCTCGCCA
AGAATGGTAAGAAGATCGAAATAGACAACGTATCGGCGGAGATCGAACGG
CTCACGAATGAGCTCGCGGGCGATGGCTCCGCCGTCACCGGCATGCCGAT
TCACCTCAAGCTTCTTCGTCCCTCTGGTCCCACCCTGACACTCATCGATC
TTCCTGGCATCACCCACAACTCTGCGGATGGCACACAGGACATTCACACC
GAAACAGTCGATCTTGTCAAGAAGTACATTTCGGAAGACAACATGCTAAG
TGAAGAGCTAGGAGCGCTCGAGCAGCTCCGCGCACTGCTACAGGGAAACG
AAGAAGTATCGATCCTTGGCGTGGTGGTGGCTGGGGCGCAGAGTGCAGGA
AAGTCCTCCGTCTTGGAGGCCCTGGGTGGCATGAAGCTGCCCCGGGGGCA
GAACATCACCACTCGGGTACCGCTCATTCTCAGTCTGGTGGCCGTTCCGG
GTGTGGAACCCCACGCCATCATCGGCGGGGACGCCGATCTCGCCAAGAAT
GGTAAGAAGATCGAAATAGACAACGTATCGGCGGAGATCGAACGGCTCAC
GAATGAGCTCGCGGGCGATGGCTCCGCCGTCACCGGCATGCCGATTCACC
TCAAGCTTCTTCGTCCCTCTGGTCCCACCCTGACACTCATCGATCTTCCT
GGCATCACCCACAACTCTGCGGATGGCACACAGGACATTCACACCGAAAC
AGTCGATCTTGTCAAGAAGTACATTTCGGAAGACAACATGGTGATCCTCG
TCGTCATTCCAGCCATGGATGACTTCGCCAACGCGGAGGCTCTTTCACTC
GCTAAGGAGTACGATCCCCATGGCCGGCGCACGCTCGGTGTCGTTACCAA
GACCGACGACGTCAGGGCTGGCTGCAACATCAAGGCTAAGCTTCGTATGG
AACCCGGGCATGTCGATCTAAGCCTTGGATTCATCGCGGTGGTCAACCGC
ACGCCGATTGAGGTGAAGGAAGACACGCCGGCCGAAATGGTACGCGCTCG
CGAGGTGATCCTCGTCGTCATTCCAGCCATGGATGACTTCGCCAACGCGG
AGGCTCTTTCACTCGCTAAGGAGTACGATCCCCATGGCCGGCGCACGCTC
GGTGTCGTTACCAAGACCGACGACGTCAGGGCTGGCTGCAACATCAAGGC
TAAGCTTCGTATGGAACCCGGGCATGTCGATCTAAGCCTTGGATTCATCG
CGGTGGTCAACCGCACGCCGATTGAGGTGAAGGAAGACACGCCGGCCGAA
ATGGTACGCGCTCGCGAG
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