mRNA_L-elsbetiae_contig679.15545.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig679.15545.1 vs. uniprot
Match: D8LED2_ECTSI (Ig-like protein, group 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED2_ECTSI) HSP 1 Score: 256 bits (654), Expect = 7.420e-78 Identity = 138/319 (43.26%), Postives = 186/319 (58.31%), Query Frame = 2 Query: 35 ACVPNPCLNGGSCKVDPAGGHQCTCSSEHRGMQCQIETAGLAEFLIEVEFVGTVTDSQRATFQSAADRWSEVVSHVPCGGSRSN--PAGRNLITATLAEDDGPGGTLGSAVPISVWNECPTISAVAEITLDIEDVAQLEASGELLDIILHEMGHAIGVGSFWSIPGLACSTCRRVRNAEWMCPALVQEYNDLLGNPGGTEADIIEADFSSSKRRNEILRRTVCVHLDEDIFGVELMTGIFHPSAGN-PLSKLTAASLEDIKYIVDPSAVDAYALPLEKAGLRIEGQPR---FTGSAVEATIDLLGQAG-VVGQTTGYRI 970 AC PNPC+NGGSC+VDP GG+ C+C S + M C+ + G++EF I V+F+G+ TD ++ FQSAA+RWSEV++ +PC G+ N AG IT+TL DG GTLG A P +++C IS E+T DI+D+A++E G +ILHEMGH IG G+ W CS C +AEW CP Q YND +GNP G+ ADIIE + + T C H E F ELMTG + AG PLSKLT ASL D Y+V P+ D+Y +P + +G+ + S + TI + + G +V G RI Sbjct: 126 ACDPNPCMNGGSCEVDPNGGYTCSCGSSYGAMMCETDVTGMSEFFITVDFLGSWTDERKGVFQSAANRWSEVLTRIPCSGTNGNRGAAGELTITSTLEPIDGVYGTLGFAGPRGTYSDCRGISYSGEMTFDIDDIAEMERQGTFEGVILHEMGHVIGTGTLWG----ECSDCDSTSSAEWKCPLAAQVYNDFMGNPAGSRADIIELEGGTG---------TSCGHFSESTFKDELMTG--YVKAGQMPLSKLTCASLADRGYVVQPAKADSYTVPSRRDPSARQGETKTYKLAESTDDTTIGVCNEEGEIVDTMQGKRI 429
BLAST of mRNA_L-elsbetiae_contig679.15545.1 vs. uniprot
Match: D8LED1_ECTSI (PR1-like metalloprotease n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED1_ECTSI) HSP 1 Score: 261 bits (668), Expect = 5.710e-77 Identity = 138/318 (43.40%), Postives = 186/318 (58.49%), Query Frame = 2 Query: 35 ACVPNPCLNGGSCKVDPAGGHQCTCSSEHRGMQCQIETAGLAEFLIEVEFVGTVTDSQRATFQSAADRWSEVVSHVPCGGSRSN--PAGRNLITATLAEDDGPGGTLGSAVPISVWNECPTISAVAEITLDIEDVAQLEASGELLDIILHEMGHAIGVGSFWSIPGLACSTCRRVRNAEWMCPALVQEYNDLLGNPGGTEADIIEADFSSSKRRNEILRRTVCVHLDEDIFGVELMTGIFHPSAGNPLSKLTAASLEDIKYIVDPSAVDAYALPLEKAGLRIEGQPR---FTGSAVEATIDLLGQAG-VVGQTTGYRI 970 AC PNPC+NGGSC+VDP GG+ C+C S + GM C+ + G++EF I V+F+GT +D ++ FQ AA+RWSE+++H+PC G+ N AG IT+TL DG GTLG A P +N+C IS E+T DI+D+A++E G +ILHEMGH IG G+ W CS C +AEW CP Q YND +GNP G+ ADI+E + + T C H E F ELMTG F + PLSKLT ASL D Y+V S D+Y +P + +G+ + S + TID+ + G +V G RI Sbjct: 413 ACNPNPCMNGGSCEVDPNGGYTCSCGSSYGGMMCETDVTGMSEFFITVDFLGTWSDERKGVFQRAANRWSEILTHIPCSGTNGNGGAAGELTITSTLEPIDGVYGTLGFAGPRGTYNDCRGISYSGEMTFDIDDIAEMERQGTFEGVILHEMGHVIGTGTLWG----ECSDCDSTGSAEWKCPLAAQVYNDFMGNPAGSRADIVELEGGTG---------TSCGHFSESTFEDELMTG-FVNAGTMPLSKLTCASLADQGYVVQSSKADSYTVPSRRDPSARQGETKTYKLAESTDDTTIDVCNEEGEIVDTMQGKRI 716
BLAST of mRNA_L-elsbetiae_contig679.15545.1 vs. uniprot
Match: D8LED3_ECTSI (WSC domain protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LED3_ECTSI) HSP 1 Score: 259 bits (662), Expect = 3.330e-76 Identity = 138/318 (43.40%), Postives = 185/318 (58.18%), Query Frame = 2 Query: 35 ACVPNPCLNGGSCKVDPAGGHQCTCSSEHRGMQCQIETAGLAEFLIEVEFVGTVTDSQRATFQSAADRWSEVVSHVPCGGSRSN--PAGRNLITATLAEDDGPGGTLGSAVPISVWNECPTISAVAEITLDIEDVAQLEASGELLDIILHEMGHAIGVGSFWSIPGLACSTCRRVRNAEWMCPALVQEYNDLLGNPGGTEADIIEADFSSSKRRNEILRRTVCVHLDEDIFGVELMTGIFHPSAGNPLSKLTAASLEDIKYIVDPSAVDAYALPLEKAGLRIEGQPR---FTGSAVEATIDLLGQAG-VVGQTTGYRI 970 AC PNPC+NGGSC+VDP GG+ C+C S + GM C+ + G++EF I V+F+GT +D ++ FQ AA+RWSE+++H+PC G+ N AG IT+TL DG GTLG A P +N+C IS E+T DI+D+A++E G +ILHEMGH IG G+ W CS C +AEW CP Q YND +GNP G+ ADIIE + + T C H E F ELMTG F + PLSKLT ASL D Y+V S D+Y +P + + + + S + TID+ + G +V G RI Sbjct: 400 ACNPNPCMNGGSCEVDPNGGYTCSCGSSYGGMMCETDVTGMSEFFITVDFLGTWSDERKGVFQRAANRWSEILTHIPCSGTNGNGGAAGELTITSTLEPIDGVYGTLGFAGPRGTYNDCRGISYSGEMTFDIDDIAEMERQGTFEGVILHEMGHVIGTGTLWG----ECSDCDSTGSAEWKCPLAAQVYNDFMGNPAGSRADIIELEGGTG---------TSCGHFSESTFEDELMTG-FVNAGTMPLSKLTCASLADQGYVVQSSKADSYTVPSRRDPSARQDETKTYKLAESTDDTTIDVCNEEGEIVDTMQGKRI 703
BLAST of mRNA_L-elsbetiae_contig679.15545.1 vs. uniprot
Match: D7G7J6_ECTSI (Putative zinc metalloendopeptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J6_ECTSI) HSP 1 Score: 221 bits (562), Expect = 1.860e-61 Identity = 101/205 (49.27%), Postives = 135/205 (65.85%), Query Frame = 2 Query: 35 ACVPNPCLNGGSCKVDPAGGHQCTCSSEHRGMQCQIETAGLAEFLIEVEFVGTVTDSQRATFQSAADRWSEVVSHVPCGGSRSN--PAGRNLITATLAEDDGPGGTLGSAVPISVWNECPTISAVAEITLDIEDVAQLEASGELLDIILHEMGHAIGVGSFWSIPGLACSTCRRVRNAEWMCPALVQEYNDLLGNPGGTEADIIE 643 AC PNPC+NGGSC+VDP GG+ C+C S + GM C+ + G++EF I V+F+GT +D ++ FQ AA+RWSE+++H+PC G+ N AG IT+TL DG GTLG A P +N+C IS E+T DI+D+A++E G +ILHEMGH IG G+ W CS C +AEW CP Q YND +GNP G+ ADI+E Sbjct: 504 ACNPNPCMNGGSCEVDPNGGYTCSCGSSYGGMMCETDVTGMSEFFITVDFLGTWSDERKGVFQRAANRWSEILTHIPCSGTNGNGGAAGELTITSTLEPIDGVYGTLGFAGPRGTYNDCRGISYSGEMTFDIDDIAEMERQGTFEGVILHEMGHVIGTGTLWG----ECSDCDSTGSAEWKCPLAAQVYNDFMGNPAGSRADIVE 704
BLAST of mRNA_L-elsbetiae_contig679.15545.1 vs. uniprot
Match: D8LJN8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJN8_ECTSI) HSP 1 Score: 147 bits (371), Expect = 1.160e-35 Identity = 74/161 (45.96%), Postives = 100/161 (62.11%), Query Frame = 2 Query: 38 CVPNPCLNGGSCKVDPAGGHQCTCSSEHRGMQCQIETAGLAEFLIEVEFVGTVTDSQRAT----FQSAADRWSEVVSHVPCGGSRSNPA-GRNLITATLAEDDGPGGTLGSAVPISVWNECPTISAVAEITLDIEDVAQLEASGELLDIILHEMGHAIGVG 505 C PNPCLN GSC+VDP GG+ C+CSS + GM C+ +T GL EF I +EF GT + AT FQ+AA RW +VV+H+PC G+ A G +I+ T E DG GG P V+ +CP +S + + D +D+ LE G L +++HE+GH IGVG Sbjct: 383 CNPNPCLNEGSCEVDPNGGYSCSCSSSYGGMNCETDTTGLPEFFITLEFDGTWDGALDATRKDIFQTAAKRWEKVVTHIPCTGTHPEGATGELIISVTQHEIDGSGGQFALGGPSDVYGDCPGVSYMGVMIFDSDDIDDLEDDGILEGLVVHEIGHVIGVG 543
BLAST of mRNA_L-elsbetiae_contig679.15545.1 vs. uniprot
Match: A0A2A3HRT4_9ACTN (Leishmanolysin n=1 Tax=Streptomyces sp. TLI_235 TaxID=1938860 RepID=A0A2A3HRT4_9ACTN) HSP 1 Score: 131 bits (329), Expect = 1.130e-31 Identity = 88/239 (36.82%), Postives = 122/239 (51.05%), Query Frame = 2 Query: 146 TAGLAEFLIEVEFVGTVTDSQRATFQSAADRWSEV-VSHVPCGGSRSNPAGRNLITATLAEDDGPGGTLGSAVPISVW---NECPTISAVAEITLDIEDVAQLEASGELLDIILHEMGHAIGVGSFWSIPGLACSTCRRVRNAEWMCPALVQEYNDLLGNPGGTEADIIEADFSSSKRRNEILRRTVCVHLDEDIFGVELMTGIFHPSAGNPLSKLTAASLEDIKYIVDPSAVDAYALP 850 T + + IEVEF+G +TDSQ++ F++AADRW V V +P LI A DGPG LG A P + + A ++ D +D+A +EA+G L+D+I HEMGH IG+G+ W + GL + RN + EY L+G+P + ++ H E +F ELMTG F AGNPLS++TAASL+D+ Y VD A D Y LP Sbjct: 20 TGTTSPYTIEVEFLGGLTDSQKSAFKAAADRWVRVIVGDLPDVAVGDRIVDDLLIRAQGRVIDGPGHILGQAGPTQLRPGPGPSEFLPAAGLMSFDQDDLAAMEANGTLIDVITHEMGHVIGIGTIWKLKGLLRGS--GTRNPTFTGLGASSEYAVLVGDPEPRRVPVENTGGPGTRDG----------HWRETVFADELMTG-FVGHAGNPLSRMTAASLQDLGYEVDLDAADPYVLP 245
BLAST of mRNA_L-elsbetiae_contig679.15545.1 vs. uniprot
Match: A0A6I5NWK5_9CYAN (P/Homo B domain-containing protein n=1 Tax=Leptolyngbya sp. SIO4C1 TaxID=2607770 RepID=A0A6I5NWK5_9CYAN) HSP 1 Score: 134 bits (336), Expect = 1.220e-31 Identity = 85/230 (36.96%), Postives = 126/230 (54.78%), Query Frame = 2 Query: 164 FLIEVEFVGTVTDSQRATFQSAADRWSEVV-SHVPCGGSRSNPAGRNLITATLAEDDGPGGTLGSAVPISVWNECPTISAVAEITLDIEDVAQLEASGELLDIILHEMGHAIGVGSFWSIPGLACSTCRRVRNAEWMCPALVQEYNDLLGNPGGTEADIIEADFSSSKRRNEILRRTVCVHLDEDIFGVELMTGIFHPSAGNPLSKLTAASLEDIKYIVDPSAVDAYALP 850 F I V F+G + QR+ F++AA RWSE++ +P S+ LI A+ A DGP G LG A P + ++ + A + DI D+A+LEA+G L ++I+HEMGH +G+G+ W GL T R N + ++E+ L+G P T + + ++ H E +FG ELMTG +P + NP+S+LT ASLED+ Y V+ +A D YALP Sbjct: 150 FTINVRFLGGLNAGQRSVFETAAARWSEIIIGDLPSVTIGSDVIDDVLIEASGASIDGPNGILGQAGPTRLRSDS-LLPATGTMQFDIGDLARLEANGGLFNVIVHEMGHVLGIGTIWQSKGLL--TGRGSPNPIFTGMNAMREFAALIGAPTPTPVPVANTGGAGTRDG----------HWREAVFGSELMTGFLNPGS-NPISRLTIASLEDLGYAVNYNAADPYALP 365
BLAST of mRNA_L-elsbetiae_contig679.15545.1 vs. uniprot
Match: A0A6P0GFL8_9ACTN (Peptidase n=2 Tax=Geodermatophilus normandii TaxID=1137989 RepID=A0A6P0GFL8_9ACTN) HSP 1 Score: 131 bits (329), Expect = 1.230e-31 Identity = 89/234 (38.03%), Postives = 121/234 (51.71%), Query Frame = 2 Query: 164 FLIEVEFVGTVTDSQRATFQSAADRWSEVV-SHVPCGGSRSNPAGRNLITATLAEDDGPGGTLGSAVPISVWNECPT----ISAVAEITLDIEDVAQLEASGELLDIILHEMGHAIGVGSFWSIPGLACSTCRRVRNAEWMCPALVQEYNDLLGNPGGTEADIIEADFSSSKRRNEILRRTVCVHLDEDIFGVELMTGIFHPSAGNPLSKLTAASLEDIKYIVDPSAVDAYALP 850 F IEV F+G ++D+QR F +AADRW++VV +P LI A DGPG LG A P + E + A ++ DI D+AQ+EA G L D+I HEMGH +GVG+ W + GL N ++ P ++E+ LLG+ G + +E R H E +F ELMTG F +AGNPLS++T AS D+ Y VDP A + Y LP Sbjct: 26 FTIEVRFLGGLSDAQRGAFAAAADRWAQVVVGDLPDVLVDGEVVDDLLILAQGVPIDGPGRILGQAGPTHIRPEAAGDAAFLPAKGIMSFDIADLAQMEADGTLHDVIAHEMGHVLGVGTIWDLKGLLQGA--GTANPTFVGPGAMEEFGALLGD-GEAQPVPVENTGGPGTRDG---------HWRESVFRNELMTG-FVGAAGNPLSRMTVASFGDLGYQVDPDAAEPYDLP 246
BLAST of mRNA_L-elsbetiae_contig679.15545.1 vs. uniprot
Match: A0A525D5B4_9DELT (P/Homo B domain-containing protein n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A525D5B4_9DELT) HSP 1 Score: 133 bits (334), Expect = 2.630e-31 Identity = 85/243 (34.98%), Postives = 127/243 (52.26%), Query Frame = 2 Query: 125 GMQCQIETAGLAEFLIEVEFVGTVTDSQRATFQSAADRWSEVV-SHVPCGGSRSNPAGRNLITATLAEDDGPGGTLGSAVPISVWNECPTISAVAEITLDIEDVAQLEASGELLDIILHEMGHAIGVGSFWSIPGLACSTCRRVRNAEWMCPALVQEYNDLLGNPGGTEADIIEADFSSSKRRNEILRRTVCVHLDEDIFGVELMTGIFHPSAGNPLSKLTAASLEDIKYIVDPSAVDAYALP 850 G+ +E ++F I+V+F+G ++ SQRA ++AA RWSEVV +P LI + A DGPGGTLG A P V I I D D+A++EA G LL++++HE+ H +G+G+ W++ L N ++ A ++E+ DL+G P + S ++ H E +FG ELMTG + + NPLS+LT ASLED+ + V +A D Y LP Sbjct: 138 GLSLTVEEEITSDFTIDVQFMGGLSQSQRAVVETAAQRWSEVVVGDLPAYIVDGREIDDVLIEFSGASIDGPGGTLGQAGPTHV-RPYSLIPIKGIIEFDRGDLARMEAEGSLLNVMIHEIAHILGLGTIWALKNLLIGA--GTANPQFTGQAAMREFADLIGAPSPLPVPVANTGGSGTREG----------HWRESVFGNELMTGYLN-AGSNPLSRLTIASLEDLGHTVSYNAADPYTLP 366
BLAST of mRNA_L-elsbetiae_contig679.15545.1 vs. uniprot
Match: A0A5B2V7R8_9HYPH (Peptidase n=1 Tax=Salinarimonas soli TaxID=1638099 RepID=A0A5B2V7R8_9HYPH) HSP 1 Score: 129 bits (325), Expect = 4.320e-31 Identity = 101/291 (34.71%), Postives = 136/291 (46.74%), Query Frame = 2 Query: 62 GGSCKVDPAGGHQCTCSSEHRGMQCQIETAGLAEFLIEVEFVGTVTDSQRATFQSAADRWSE-VVSHVPCGGSRSNPAGRNLITATLAEDDGPGGTLGSAVPISVW----NECPTISAVAEITLDIEDVAQLEASGELLDIILHEMGHAIGVGSFWSIPGLACSTCRRVRNAEWMCPALVQEYNDLLGNPGGTEADIIEADFSSSKRRNEILRRTVCVHLDEDIFGVELMTGIFHPSAGNPLSKLTAASLEDIKYIVDPSAVDAYALP----LEKAGLRIEGQPRFTGSAV 907 GGS VD A G Q TA + I V F+G +TD Q+A F+ AADRW+ +V +P LI A A DGPG LG A P + + A E+T D D+A +EA G L D+I HEMGH IG+G+ W+ + N ++ P + Y+ L G P T + N+ T H + +FG ELMTG F GNPLS++T SL D+ Y+VDP A + YALP + +AG+ + G P T V Sbjct: 11 GGSSAVDAASG------------AAQAATA----YTIVVRFLGGLTDRQKAAFRGAADRWTRAIVGDLPSVNVDGETIDDLLILAQGAPIDGPGLILGQAGPTRLRPASAGSAAFLPAKGEMTFDTADLAAMEADGRLDDVIAHEMGHVIGIGTIWTRKNVVRDL--GTSNPVFIGPHAMDAYSQLRGLPTPTPVPV----------ENKGGPGTAGGHWRDSVFGNELMTG-FVNGPGNPLSRMTIQSLADLGYVVDPGAAEPYALPTHVEMAEAGV-LGGAPMATKGIV 271 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig679.15545.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig679.15545.1 >prot_L-elsbetiae_contig679.15545.1 ID=prot_L-elsbetiae_contig679.15545.1|Name=mRNA_L-elsbetiae_contig679.15545.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=289bp MQCQIETAGLAEFLIEVEFVGTVTDSQRATFQSAADRWSEVVSHVPCGGSback to top mRNA from alignment at L-elsbetiae_contig679:8470..16410+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig679.15545.1 ID=mRNA_L-elsbetiae_contig679.15545.1|Name=mRNA_L-elsbetiae_contig679.15545.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7941bp|location=Sequence derived from alignment at L-elsbetiae_contig679:8470..16410+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig679:8470..16410+ >mRNA_L-elsbetiae_contig679.15545.1 ID=mRNA_L-elsbetiae_contig679.15545.1|Name=mRNA_L-elsbetiae_contig679.15545.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1734bp|location=Sequence derived from alignment at L-elsbetiae_contig679:8470..16410+ (Laminarionema elsbetiae ELsaHSoW15)back to top |