mRNA_L-elsbetiae_contig6770.15527.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6770.15527.1
Unique NamemRNA_L-elsbetiae_contig6770.15527.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig6770.15527.1 vs. uniprot
Match: D8LEE0_ECTSI (DUF2431 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEE0_ECTSI)

HSP 1 Score: 431 bits (1108), Expect = 1.360e-143
Identity = 313/533 (58.72%), Postives = 338/533 (63.41%), Query Frame = 1 
Query:    1 MGKYRGHQDKSRRGREKKXXXXXXXXXXXXXXA---QLETA--------DSSPGRPQQQQQVGNPGAGGKAAGAGAKRKLKHVTYAKEHSVLICGDGDFSFTRGVIRHRATGKGVVATSLDSRRAVLKKYPRAETWLAKLDADGAQVVHSVDATRLEETLLGSG---GGXXXXXXXXXGKKRVLFDRVVFNFPHTGKQRTHLNRNLIRDFFASTKGLVKCAPQGGEVHVTLKDKPPYSGWNVKAMAKESELILVRTLAFDPSVFPGYRHSTTDPQAKEFDAGGARTNVFCRARSPFDDNVDESGSFPVVVQPETAPGSEHTPSVDENESDGDEGS----------------DDSDLFGKGV--DGESDG-----EDEE---------AGAMDAAXXXXXXXXXXXXXXXKKGRGKKRSHRGDKGGPRD--GGTGXXXXXXXXXXXQSESSKRGMLQPLVQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGELPLGTAPP-PASGGKEKTPKRKRGKYVVAS-NKRLRD 1449
            MGK+RGHQDKSRRGREKK              A   Q E+A         SSPGR QQ+  VG            AKRKLKHVTYAKEHSVLI GDGDFSFTRGVIRHR TG GVVATSLDS +AVLKKYPRAETWL KL+ADGAQV HSVDATRLEETLLG+G   G           K RVLFDRVVFNFPHTG QRTHLNRNLIRDFFASTKGLVKCA  GGEVHVTLKDKPPYSGWNVKAMA+ESELI+VR LAFDPSVFPGYRHSTTDPQAK+FDAGGARTNVFCRARS  DDNVDESG+FPV+V+   A  S ++                              D+SDLFG G    G+ DG     +DEE         AGA D A               +K RGKK+   G+KGG      G+             + +SKRGMLQP VQK          XXXXXXXXXXXXXXXXXXXXXXX           PA+  K K+PKRKRGKYVV S  KR RD
Sbjct:    1 MGKFRGHQDKSRRGREKKLLKKKAGAAAGGIRAVAAQAESAVPGGDSLTSSSPGRLQQRGVVG------------AKRKLKHVTYAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLKKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGEGRGDDGGGGGVAGEKTRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELIMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGARTNVFCRARSELDDNVDESGAFPVIVRRGGAASSANSVETXXXXXXXXXXXXXXXXXXXXXXXXXXXDNSDLFGGGGCGSGDPDGGLGSWDDEERKGEKTTASAGAGDVAHGSGGVDQATADANGRKNRGKKKKT-GEKGGVGGVPSGSEAEEVNEGKGSVSNGASKRGMLQPPVQKKKAAKRRAQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMPAN--KAKSPKRKRGKYVVNSAKKRPRD 518
[Close]
BLAST of mRNA_L-elsbetiae_contig6770.15527.1 vs. uniprot
Match: D8LED8_ECTSI (DUF2431 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED8_ECTSI)

HSP 1 Score: 265 bits (676), Expect = 1.150e-81
Identity = 162/298 (54.36%), Postives = 181/298 (60.74%), Query Frame = 1 
Query:    1 MGKYRGHQDKSRRGREKKXXXXXXXXXXXXXXA--QLETADS--------SPGRPQQQQQVGNPGAGGKAAGAGAKRKLKHVTYAKEHSVLICGDGDFSFTRGVIRHRATGKGVVATSLDSRRAVLKKYPRAETWLAKLDADGAQVVHSVDATRLEETLLGSGGGXXXXXXXXXGKK-RVLFDRVVFNFPHTGKQRTHLNRNLIRDFFASTKGLVKCAPQGGEVHVTLKDKPPYSGWNVKAMAKESELILVRTLAFDPSVFPGYRHSTTDPQAKEFDAGGAR-TNVFCRARSPFDDNV 858
            MGK+RGHQD+S RGRE K              A  Q E+  S        +PG  QQQQQ             G KRKLKHVTYAKEHSVL+ GDG FSF    + HR T  GVVATSLDS +AVLKKYP+AETWL KL+ADG Q   +             GG          G+K R+ F RVVFNFPHTG Q THLNR+LI DFFASTKGLVKCA  GG VHVTLKDKPP+SGWN     K ++      +  DPSVFPGY +STTDPQA  F+A GAR TNV C ARS  DDN 
Sbjct:    1 MGKFRGHQDRSWRGRENKILKKKVGVAVGGIHAAAQAESTVSGGDSLGSGNPGHQQQQQQ---------REAVGPKRKLKHVTYAKEHSVLLVGDGCFSFNC-CVEHRGTRAGVVATSLDSLKAVLKKYPQAETWLPKLEADGPQARENPSR----------GGWRPEGRCGVSGEKNRIWFHRVVFNFPHTGAQSTHLNRDLILDFFASTKGLVKCAAVGGHVHVTLKDKPPFSGWNGNVEGKRADH---GGVPGDPSVFPGYLYSTTDPQAMRFNAEGARRTNVLCPARSELDDNA 275
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BLAST of mRNA_L-elsbetiae_contig6770.15527.1 vs. uniprot
Match: A0A836CCP6_9STRA (DUF2431 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCP6_9STRA)

HSP 1 Score: 225 bits (573), Expect = 4.620e-67
Identity = 113/197 (57.36%), Postives = 142/197 (72.08%), Query Frame = 1 
Query:  187 AGAKRKL-KHVTYAKEHSVLICGDGDFSFTRGVIRHRATGKGVVATSLDSRRAVLKKYPRAETWLAKLDADGAQVVHSVDATRLEETLLGSGGGXXXXXXXXXGKKRVLFDRVVFNFPHTGKQRTHLNRNLIRDFFASTKGLVKCAPQGGEVHVTLKDKPPYSGWNVKAMAKESELILVRTLAFDPSVFPGYRHSTT 774
            A A RK+ K V+YA   ++L+CGDGDFSFTRG+++HR +G GVVATSLDS   VL KYP A  WL +L AD A+V+H VDATRLE+ +                + + LFDRVVFNFPHTG+QR HLNRNL+R+FF S +G VKCAP GGEVHVTLK+ PPY+GW +K  A  + ++ +RTLAFDP+ FPGYRH  +
Sbjct:   68 APAVRKVPKTVSYAANSTILVCGDGDFSFTRGLLKHRRSGAGVVATSLDSHDVVLSKYPDALEWLDRL-AD-AKVLHGVDATRLEQAV----------------RPQQLFDRVVFNFPHTGEQRVHLNRNLLRNFFRSARGYVKCAPDGGEVHVTLKEGPPYNGWEIKEAAAAAGMLPIRTLAFDPNQFPGYRHQVS 246
[Close]
BLAST of mRNA_L-elsbetiae_contig6770.15527.1 vs. uniprot
Match: G4YGB3_PHYSP (DUF2431 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YGB3_PHYSP)

HSP 1 Score: 180 bits (457), Expect = 1.040e-49
Identity = 102/238 (42.86%), Postives = 136/238 (57.14%), Query Frame = 1 
Query:  169 GGKAAGAGAKR------KLKHVTYAKEHSVLICGDGDFSFTRGVIRHRATGKGVVATSLDSRRAVLKKYPRAETWLAKLDADGAQVVHSVDATRLEETLLGSGGGXXXXXXXXXGKKRV--LFDRVVFNFPHTGKQRTHLNRNLIRDFFASTKGLVKCAPQGGEVHVTLKDKPPYSGWNVKAMAKESELILVRTLAFDPSVFPGYRHSTTDPQAKEFDAGGARTNVFCRARSPFDDNV 858
            GG +A   AKR      +     YA E  VL+ GDGDFSF+RG+++HR TG+GV+ATS DS   V KKYP A+  +A + +    V+H VDAT+L E                 G K V   F  +VFNFPH+G+QR H+NR L+ +FF S +  +      GE HVTLK +PPYS W ++  AK++  +L     F+  +FPGYRH TTDPQAK+F+     T VF   RS   + V
Sbjct:   17 GGSSAAGNAKRARHDGQQTSAQLYAAEDDVLVLGDGDFSFSRGLVKHRGTGRGVLATSFDSESQVRKKYPNAQECIAAVRSAHGLVLHDVDATKLLEL--------PQQVKTGAGMKAVPDFFKYIVFNFPHSGQQRVHINRALLLNFFGSARDRLTAH---GEAHVTLKTRPPYSNWFIEDQAKDAGFVLKERRKFNIRLFPGYRHRTTDPQAKKFEPDLCVTYVFVVNRSKVRNRV 243
[Close]
BLAST of mRNA_L-elsbetiae_contig6770.15527.1 vs. uniprot
Match: D0MYL5_PHYIT (DUF2431 domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MYL5_PHYIT)

HSP 1 Score: 177 bits (449), Expect = 7.190e-49
Identity = 97/222 (43.69%), Postives = 135/222 (60.81%), Query Frame = 1 
Query:  187 AGAKRKLKHVT-------YAKEHSVLICGDGDFSFTRGVIRHRATGKGVVATSLDSRRAVLKKYPRAETWLAKLDADGAQVVHSVDATRLEETLLGSGGGXXXXXXXXXGKKRV--LFDRVVFNFPHTGKQRTHLNRNLIRDFFASTKGLVKCAPQGGEVHVTLKDKPPYSGWNVKAMAKESELILVRTLAFDPSVFPGYRHSTTDPQAKEFDAGGARTNVF 825
            +GAKR+ +H T       YA + +VL+ GDGDFSF+RG+++HR+TG+GV+ATS DS   V +KYP A+  +A + +    V+H VDAT+L E                 G K +   F  +VFNFPH+G+QR H+NR L+ +FF S +  +      GE HVTLK +PPYS W ++  AK +  ++     FD  +FPGYRH TTDPQAK+F+A    T VF
Sbjct:   19 SGAKRQ-RHGTQETSTQLYAADDTVLVLGDGDFSFSRGLVKHRSTGQGVIATSFDSESQVRRKYPNAQECIAAVRSAHGLVLHDVDATKLFEL--------PQKVKTGTGLKTIPDFFQYIVFNFPHSGQQRVHINRALLLNFFESARDRLTVR---GEAHVTLKTRPPYSNWFIEDQAKIAGFVMKERRQFDIKLFPGYRHRTTDPQAKKFEAHLCVTYVF 228
[Close]
BLAST of mRNA_L-elsbetiae_contig6770.15527.1 vs. uniprot
Match: A0A833SYA2_PHYIN (DUF2431 domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SYA2_PHYIN)

HSP 1 Score: 179 bits (455), Expect = 1.830e-48
Identity = 99/229 (43.23%), Postives = 138/229 (60.26%), Query Frame = 1 
Query:  187 AGAKRKLKHVT-------YAKEHSVLICGDGDFSFTRGVIRHRATGKGVVATSLDSRRAVLKKYPRAETWLAKLDADGAQVVHSVDATRLEETLLGSGGGXXXXXXXXXGKKRV--LFDRVVFNFPHTGKQRTHLNRNLIRDFFASTKGLVKCAPQGGEVHVTLKDKPPYSGWNVKAMAKESELILVRTLAFDPSVFPGYRHSTTDPQAKEFDAGGARTNVFCRARSPF 846
            +GAKR+ +H T       YA + +VL+ GDGDFSF+RG+++HR+TG+GV+ATS DS   V +KYP A+  +A + +    V+H VDAT+L E                 G K +   F  +VFNFPH+G+QR H+NR L+ +FF S +  +      GE HVTLK +PPYS W ++  AK +  ++     FD  +FPGYRH TTDPQAK+F+A    T VF   RS +
Sbjct:   19 SGAKRQ-RHGTQETSTQLYAADDTVLVLGDGDFSFSRGLVKHRSTGQGVIATSFDSESQVRRKYPNAQECIAAVRSAHGLVLHDVDATKLFEL--------PQKVKTGTGLKTIPDFFQYIVFNFPHSGQQRVHINRALLLNFFESARDRLTVR---GEAHVTLKTRPPYSNWFIEDQAKIAGFVMKERRQFDIKLFPGYRHRTTDPQAKKFEAHLCVTYVFVVNRSKY 235
[Close]
BLAST of mRNA_L-elsbetiae_contig6770.15527.1 vs. uniprot
Match: A0A3R7WIN5_9STRA (DUF2431 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3R7WIN5_9STRA)

HSP 1 Score: 179 bits (455), Expect = 1.880e-48
Identity = 97/219 (44.29%), Postives = 131/219 (59.82%), Query Frame = 1 
Query:  196 KRKLKHVTYAKEHSVLICGDGDFSFTRGVIRHRATGKGVVATSLDSRRAVLKKYPRAETWLAKLDADGAQVVHSVDATRLEETLLGSGGGXXXXXXXXXGKKRV--LFDRVVFNFPHTGKQRTHLNRNLIRDFFASTKGLVKCAPQGGEVHVTLKDKPPYSGWNVKAMAKESELILVRTLAFDPSVFPGYRHSTTDPQAKEFDAGGARTNVFCRARSPF 846
            K+ L  V YA + +VL+ GDGDFSF+RG+I+HR TG+GV+ATS DS   V +KYP A+  +A + A    V+H VDAT+L E                 G K V   F  ++FNFPH+G+QR H+NR L+ +FF S +  +      GE HVTLK +PPYS W ++  AK++  ++     FD  +FPGYRH TTDPQAK F+     T VF   RS +
Sbjct:   33 KKTLTQV-YAPDDAVLVLGDGDFSFSRGLIKHRGTGRGVLATSFDSENEVRRKYPNAQECIAAVQAAHGLVLHDVDATKLLEL--------PRHLKIGTGMKTVPDFFQYIIFNFPHSGQQRVHINRALLLNFFESARDRLLVH---GEAHVTLKTRPPYSNWFIEDQAKKAGFVMKDRRKFDVRLFPGYRHRTTDPQAKTFEPNLCVTYVFVVHRSKY 239
[Close]
BLAST of mRNA_L-elsbetiae_contig6770.15527.1 vs. uniprot
Match: F0W3R3_9STRA (Uncharacterized protein AlNc14C14G1639 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W3R3_9STRA)

HSP 1 Score: 176 bits (447), Expect = 4.380e-48
Identity = 90/209 (43.06%), Postives = 127/209 (60.77%), Query Frame = 1 
Query:  220 YAKEHSVLICGDGDFSFTRGVIRHRATGKGVVATSLDSRRAVLKKYPRAETWLAKLDADGAQVVHSVDATRLEETLLGSGGGXXXXXXXXXGKKRVLFDRVVFNFPHTGKQRTHLNRNLIRDFFASTKGLVKCAPQGGEVHVTLKDKPPYSGWNVKAMAKESELILVRTLAFDPSVFPGYRHSTTDPQAKEFDAGGARTNVFCRARSPF 846
            Y K  S+LI GDGDFSF++ ++     G+ ++ATS D  +AV +KY  A++ +  +   GA V+H VDAT+L++TL    G               LFD V+FNFPHTG+QR HLNRNL+RDFF S + ++      GEVH+TLK++PPYS W ++  A++S  +L     FD  ++PGY+H TTDP AK F+     T +F   R  F
Sbjct:   28 YTKGSSILIVGDGDFSFSKALLSICECGQRLIATSFDDEKAVFEKYANAKSCIQYIKTHGAYVLHRVDATQLDQTLWRVNG------------LTKLFDYVIFNFPHTGQQRVHLNRNLLRDFFQSARTILTPL---GEVHITLKNRPPYSNWQIEKFARDSHYLLKARQKFDSRLYPGYQHRTTDPLAKFFETELCTTYIFIVNRVKF 221
[Close]
BLAST of mRNA_L-elsbetiae_contig6770.15527.1 vs. uniprot
Match: M4BFN6_HYAAE (DUF2431 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BFN6_HYAAE)

HSP 1 Score: 178 bits (451), Expect = 6.980e-48
Identity = 97/219 (44.29%), Postives = 130/219 (59.36%), Query Frame = 1 
Query:  220 YAKEHSVLICGDGDFSFTRGVIRHRATGKGVVATSLDSRRAVLKKYPRAETWLAKLDADGAQVVHSVDATRLEETLLGSGGGXXXXXXXXXGKKRV--LFDRVVFNFPHTGKQRTHLNRNLIRDFFASTKGLVKCAPQGGEVHVTLKDKPPYSGWNVKAMAKESELILVRTLAFDPSVFPGYRHSTTDPQAKEFDAGGARTNVFC--RARSPFDDNVDE 864
            YA + +VLI GDGDFSF+RG+++HR TG G++ATS DS   V  KY  A   +A + +    V+H VDAT+L E                 G K +  +F  ++FNFPH+G+QR H+NR L+ +FF S +  +      GEVHVTLK +PPYS W V+  AKE+  +L     FD  +FPGYRH TTDPQAK+FD     T VF   R++ PF +   E
Sbjct:   39 YAPKDTVLIVGDGDFSFSRGLVKHRGTGLGIIATSFDSDSQVCAKYSNAHECIAAVQSSLGLVLHDVDATKLLEL--------PQHVQTGTGSKTISDVFQYIIFNFPHSGQQRVHINRALLLNFFESARDRLSVH---GEVHVTLKTQPPYSNWFVEDRAKEAGFVLKERRKFDSRLFPGYRHRTTDPQAKKFDLDLCVTFVFVVNRSKYPFQERQAE 246
[Close]
BLAST of mRNA_L-elsbetiae_contig6770.15527.1 vs. uniprot
Match: A0A1V9ZN60_9STRA (DUF2431 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZN60_9STRA)

HSP 1 Score: 175 bits (444), Expect = 2.820e-47
Identity = 91/227 (40.09%), Postives = 131/227 (57.71%), Query Frame = 1 
Query:  220 YAKEHSVLICGDGDFSFTRGVIRHRATGKGVVATSLDSRRAVLKKYPRAETWLAKLDADGAQVVHSVDATRLEETLLGSGGGXXXXXXXXXGKKRVLFDRVVFNFPHTGKQRTHLNRNLIRDFFASTKGLVKCAPQGGEVHVTLKDKPPYSGWNVKAMAKESELILVRTLAFDPSVFPGYRHSTTDPQAKEFDAGGARTNVFCRARSPFDDNVDESGSFPVV-VQPE 897
            Y  +  +L+ GDGDF+F++G++ HR +G  ++ATS DS  AV  KY  A T +  +    A V+H +DAT+L++ +                    LFD ++FNFPH+G+QR H+NR L+ DFF S +  +K     GEVH++LK+KPPYS WNV+  AK S  +L     F   +FPGY H TTDP AK+F+A    T VF   RS +    ++    P+V  QP+
Sbjct:   33 YTAKDVILVLGDGDFTFSKGLVEHRGSGINLIATSFDSSTAVRDKYKNAYTCINAIRQAKAHVLHDIDATKLDQLVHNDA-------------VPALFDYIIFNFPHSGEQRVHINRVLLLDFFGSARSKLKFR---GEVHISLKNKPPYSNWNVEDQAKASGFVLKERRPFRSKLFPGYNHRTTDPDAKKFEADQCTTYVFIVDRSRYPVPTEQPPKTPLVNTQPQ 243
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6770.15527.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEE0_ECTSI1.360e-14358.72DUF2431 domain-containing protein n=2 Tax=Ectocarp... [more]
D8LED8_ECTSI1.150e-8154.36DUF2431 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A836CCP6_9STRA4.620e-6757.36DUF2431 domain-containing protein (Fragment) n=1 T... [more]
G4YGB3_PHYSP1.040e-4942.86DUF2431 domain-containing protein n=1 Tax=Phytopht... [more]
D0MYL5_PHYIT7.190e-4943.69DUF2431 domain-containing protein n=1 Tax=Phytopht... [more]
A0A833SYA2_PHYIN1.830e-4843.23DUF2431 domain-containing protein n=1 Tax=Phytopht... [more]
A0A3R7WIN5_9STRA1.880e-4844.29DUF2431 domain-containing protein n=1 Tax=Peronosp... [more]
F0W3R3_9STRA4.380e-4843.06Uncharacterized protein AlNc14C14G1639 n=1 Tax=Alb... [more]
M4BFN6_HYAAE6.980e-4844.29DUF2431 domain-containing protein n=1 Tax=Hyaloper... [more]
A0A1V9ZN60_9STRA2.820e-4740.09DUF2431 domain-containing protein n=1 Tax=Thrausto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6770contigL-elsbetiae_contig6770:2958..7789 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score436.4
Seed ortholog evalue1.7e-119
Seed eggNOG ortholog2880.D8LEE0
KEGG koko:K10696,ko:K19307
Hectar predicted targeting categoryother localisation
EggNOG free text desc.rRNA (uridine-N3-)-methyltransferase activity
EggNOG OGsKOG4174@1,KOG4174@2759
EC2.1.1.313,2.3.2.27
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009,ko04121
Exons7
Model size1496
Cds size1461
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6770.15527.1prot_L-elsbetiae_contig6770.15527.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6770 2958..7754 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816750.2791362-CDS-L-elsbetiae_contig6770:2957..32591622816750.2791362-CDS-L-elsbetiae_contig6770:2957..3259Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6770 2958..3259 +
1691683785.2396073-CDS-L-elsbetiae_contig6770:2957..32591691683785.2396073-CDS-L-elsbetiae_contig6770:2957..3259Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6770 2958..3259 +
1622816750.2921815-CDS-L-elsbetiae_contig6770:3542..36451622816750.2921815-CDS-L-elsbetiae_contig6770:3542..3645Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6770 3543..3645 +
1691683785.2540162-CDS-L-elsbetiae_contig6770:3542..36451691683785.2540162-CDS-L-elsbetiae_contig6770:3542..3645Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6770 3543..3645 +
1622816750.3045647-CDS-L-elsbetiae_contig6770:4130..43271622816750.3045647-CDS-L-elsbetiae_contig6770:4130..4327Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6770 4131..4327 +
1691683785.2696438-CDS-L-elsbetiae_contig6770:4130..43271691683785.2696438-CDS-L-elsbetiae_contig6770:4130..4327Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6770 4131..4327 +
1622816750.3182223-CDS-L-elsbetiae_contig6770:5469..55531622816750.3182223-CDS-L-elsbetiae_contig6770:5469..5553Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6770 5470..5553 +
1691683785.2788076-CDS-L-elsbetiae_contig6770:5469..55531691683785.2788076-CDS-L-elsbetiae_contig6770:5469..5553Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6770 5470..5553 +
1622816750.3321786-CDS-L-elsbetiae_contig6770:5863..59601622816750.3321786-CDS-L-elsbetiae_contig6770:5863..5960Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6770 5864..5960 +
1691683785.2866287-CDS-L-elsbetiae_contig6770:5863..59601691683785.2866287-CDS-L-elsbetiae_contig6770:5863..5960Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6770 5864..5960 +
1622816750.3460088-CDS-L-elsbetiae_contig6770:6718..67901622816750.3460088-CDS-L-elsbetiae_contig6770:6718..6790Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6770 6719..6790 +
1691683785.295232-CDS-L-elsbetiae_contig6770:6718..67901691683785.295232-CDS-L-elsbetiae_contig6770:6718..6790Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6770 6719..6790 +
1622816750.3582804-CDS-L-elsbetiae_contig6770:7148..77541622816750.3582804-CDS-L-elsbetiae_contig6770:7148..7754Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6770 7149..7754 +
1691683785.3062744-CDS-L-elsbetiae_contig6770:7148..77541691683785.3062744-CDS-L-elsbetiae_contig6770:7148..7754Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6770 7149..7754 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816750.368571-UTR-L-elsbetiae_contig6770:7754..77891622816750.368571-UTR-L-elsbetiae_contig6770:7754..7789Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6770 7755..7789 +
1691683785.3156016-UTR-L-elsbetiae_contig6770:7754..77891691683785.3156016-UTR-L-elsbetiae_contig6770:7754..7789Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6770 7755..7789 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6770.15527.1

>prot_L-elsbetiae_contig6770.15527.1 ID=prot_L-elsbetiae_contig6770.15527.1|Name=mRNA_L-elsbetiae_contig6770.15527.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=487bp
MGKYRGHQDKSRRGREKKLLKKKGAAAGGSGGAQLETADSSPGRPQQQQQ
VGNPGAGGKAAGAGAKRKLKHVTYAKEHSVLICGDGDFSFTRGVIRHRAT
GKGVVATSLDSRRAVLKKYPRAETWLAKLDADGAQVVHSVDATRLEETLL
GSGGGDGVGGGGGEGKKRVLFDRVVFNFPHTGKQRTHLNRNLIRDFFAST
KGLVKCAPQGGEVHVTLKDKPPYSGWNVKAMAKESELILVRTLAFDPSVF
PGYRHSTTDPQAKEFDAGGARTNVFCRARSPFDDNVDESGSFPVVVQPET
APGSEHTPSVDENESDGDEGSDDSDLFGKGVDGESDGEDEEAGAMDAASG
GGGDSSASGGGGGKKGRGKKRSHRGDKGGPRDGGTGEEGGEAEAGGEQSE
SSKRGMLQPLVQKKKAAKRRAQRKKKAAAAKEATAATAAAAAAAAAGELP
LGTAPPPASGGKEKTPKRKRGKYVVASNKRLRDGQE*
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mRNA from alignment at L-elsbetiae_contig6770:2958..7789+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6770.15527.1 ID=mRNA_L-elsbetiae_contig6770.15527.1|Name=mRNA_L-elsbetiae_contig6770.15527.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4832bp|location=Sequence derived from alignment at L-elsbetiae_contig6770:2958..7789+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGGGAAGTACCGAGGGCACCAAGACAAGAGTCGGAGGGGCAGGGAGAA
GAAGCTTCTCAAGAAGAAAGGTGCGGCGGCAGGCGGGAGCGGCGGCGCCC
AACTCGAGACGGCCGACAGTAGTCCAGGCCGACCGCAGCAGCAACAGCAA
GTGGGAAACCCGGGGGCAGGGGGAAAGGCTGCGGGGGCGGGGGCGAAGAG
GAAGCTGAAGCATGTGACCTACGCAAAAGAGCACTCGGTGCTCATTTGTG
GAGACGGGGATTTTTCGTTCACTCGAGGAGTTATCCGCCACCGGGCAACT
GGGTGCGTATCGTATGTGCTGTTGGTATATGCATTACCCCTCCTTCGGAG
CACTCGTGCCTTTGTTGTTGTTGAGTTTGCAAAAAGCACACGAAGCGAGT
AGAAAAACAGCTCGCTCTGTACAGCAAGCAGTACCTACCTCCGCGCCATC
ACGAGGCAATAGGCTGTAACTTATCAGCAAGCGCAGCATGCGCATGTAGG
CATTCCCACTTTTTTATACTCGAGGAAAACCAACGTCCTGTGTTGCGTCC
CCAAATTACTGTTTCTCCTGCCCGTTTCATCTCAGAAAAGGCGTCGTAGC
AACCTCTCTCGACTCCAGGAGAGCTGTCCTCAAGAAGTACCCGCGTGCCG
AAACCTGGCTCGCCAAGCTTGACGCTGACGGGGCGCAGGTGAAGCGGCTC
TTTAGTGGGCGGGGTGGAAGGTCCTTGTTTTTTTTTTATCTTTTCGCTGG
GACAGCTTGTCGGAAAGGGATGGCGCGCGCAAGACCTATGTATTGTCGTA
ATTAGAAGTGCTTTTGATCGGCGTATGATACCCTGTGTACTGCTGTTTTT
TTCATGCGTGCTTCGTCTGGTTTGGGTCGGTATACCATGGCCACGGAAAT
ACATACATAGCCTCGTCCTCGTCGTGAAAACGGGACGTAAACGACCGACC
GCTCTCTGGGCCGCGACGGCAGTGCAACCACAAACTGGCGAAATGCAGCT
GTTTCTGAGGGCGTTGTACATTGTAGCATCATTTTTTAAAAGACGCGTAA
GTGATGGATTTTCTACATATCACCACCAATGTGTATCCATCACCGCCGAA
ATATATGCCTTCCTCGAAACTGATCCCCGGTGCCCCTGTCGGGGGATGCG
AACCGAAATTCGTACAACATCAGGTCGTCCACTCTGTAGACGCCACCAGG
CTTGAGGAAACCTTGCTGGGGAGCGGGGGGGGCGACGGGGTTGGCGGTGG
CGGAGGAGAAGGGAAAAAGCGGGTCTTGTTCGACCGCGTCGTGTTCAACT
TCCCGCACACGGGGAAGCAGAGGACGCACCTCAACCGGAATCTCATCCGC
GACTTCTTCGCCAGTACAAAGTGAGCTACACCTTCATATGCACATCCTGC
TGCTTCTCTCATGGTTATCTACTTCGAACTATGTAGTTCTAGCCTTCAAC
CACGTTTGGTAGTAATTAGTAATTGTCACCGATGTTCTCCTCCTAGATAC
ATATTCTCTCGAGCCCTTGTCAGCGAACGCGCAGCTAAGCAACCCAGAGT
GATTCGTACGTGGGGGGGGGGGGGCATCCTCTGTAGGGGCCCCGTATCTG
CCACGCTAGTACAATAGGGGTACTCTCCCAAATGGTCACTTTCTTTCGCC
CCCCCCGAAAAGCATGTTTCTATCTTCCTTGGGAGTGCACCAGAAACCCT
CGCTTCATGCTTCGTCACTTCGCCACGACTGTTATAAAAGCTTCGGTTTT
CAGTAGCCCCGGGCGTGGGGCGTGGTTTCGGGCGAGATGTTTACCCGATA
AGGTGAGGGACAGGCGCTTGGCGAGAGAGTCGAGGAGGAAGGGGTAAGCG
CGAACGGCGAGGGGATCCGACCCTACTTTGCTGTTCGTCACGCTGGCTGG
ACAGAGGCCTTTTCCCGCAGTGGCGACAGATGCCGTGCAGCGCTGTGTGG
TGCGCCGGGTGTTTGGCTGATGGTACGAAAACAGGGCAATAATCAAGCGC
ACGTGGACCATAGACCATGCTATCTACCATGCCTTACCACCATTCTTTTG
CGAACGTCAAGTGCCGCAGCAGTCCTGCCCTTTCTGATTAACCCTCGTCG
TCGTTTGTTTCGCAACCTCAACAGAAATGAACTCGAGATACTACATACAT
AGTTTCCCTCCTGTGTGACCCCGGTTGGGTCGTCTAGCTAGTCGTAGTGG
AGTATGGGGGCCAGTGGGGCACACAACGATTATATGCCAATGATGGGAGG
GAATATATATATATATATATCTACCAATTGTTGATCGCTTTTTTGTTGTT
GTGAAGGGCGTGTGCGATCCAGCCAGCCTGATCCTGGGGCACAGACTCCC
GCCGGTCGTAGCCTCCACGTGTCTACTCCAGTCTACCCAAAAGAAAACAA
AACACCCACTCCAGGTGGCCCCTTGTTCGTGTTGAGCGCGCCTAACCCGT
TCTCCATCCCGACCTCGGGCGATCGATCTACATATGTCCCTTCCCCTCGC
CACGCCACGCAGAGGTTTGGTCAAGTGCGCCCCGCAGGGGGGAGAGGTGC
ACGTCACTCTCAAGGACAAGCCTCCGTACTCCGGATGGAACGTGAAGTGA
GTGTTTGCCTCCGTGCCGGTGGTTTGTGTCGGTGCCCTGGTCTCTTCTGG
TTTGTGGTCATGGACGGTGTTGCGTGTGTGTTTTGCGTTTCTTCAGTTCT
TGGTTTGTTTCCCTCGACTCTTTGTCTGTTACATACGCGCTCATCTGCTT
GTTTTTTGCGGCGTTTTTGTTTTCGTTTCTGTTTTGTTTAGTTTTGTCGG
GCAAAACGCATCCAACCCTGTGCGTCACCTGACCTCTGAACGTGTGTACG
ACGCCCCCGAGATGGGACGCACCCTGATGATAAGCCTGCTGCTGTGCCTG
GTACAGGGCGATGGCCAAGGAGAGCGAGCTGATCTTGGTGAGGACCCTCG
CTTTCGACCCGTCCGTGTTCCCGGGATACCGCCACAGCACGACCGACCCT
CAGGTGAACAAGGGGCAGGACGAGTGCATGGTGTGCAGTTTCGACAAACG
GAGTTGGTTGGCGTATACGAAGTACTTCGAAGTATGTACATAAAACACAC
TCAAGAATCATTGCAACATTTTATAAGCGAAATCTTGGAGTGCAAGAACT
GGCGAACCCGACGACACTTCGTCGGCAGTGCGGGTCGCGTGGATCACTCG
TTTATTGCGGGGCTGCCTGGCTCTGTTCGGCCCGTAGTTGTCTCTCGATG
CGCTATTGTGGTGGTGGTTGGCGGGCGTCACCTCGTGAACTCTGACTGCC
GAATATGTCCACGACACAGAAAGAAAGATAAAGCTTTCTGAAACTGTCGA
CACCCACGGGCCGCTTGGTTTCGAAAACGGGAGTGCCGTCGGCGGGGTGC
TTTTTGAAAAATTTAATCAGAGTCAGAAAATCAAACAAAGAAAATCTCCC
CGCATTAGAGACGGGACGGGACTTCGTGAGGAATTGACAGATTTTTGTAC
TGTTTGCTGGTTACACGGGGCTTCGAACACGGTAGGTAGGATATGTGTTT
TTTCGAAGTTGTGGAGTGGTTTCCGTATACAACTTATGTATGTAGCAGCA
AAAAAAATGTGGATATAGTGTCTTACAGCACCTGACTCCCTCCTTGACAG
CGGCGCGTTTTATCGTATTCAAGAAGGGTAAATGCTTATGCTTCAACACA
CTTCGGTATCTCTTCCCCTCCGTTGGGATGAATCGCGCGACTGCCCCCCC
TACCAACCCAGGCCAAGGAGTTCGATGCAGGAGGCGCGAGGACGAACGTA
TTCTGCCGCGCGAGATCCCCGTTCGACGACAACGTGAGGGGCCTTCAATT
TGATTCCTCTCACGGATGGATGGAACCATACGTAGCAGCTTGCTTCCTCG
CACGGACGGTATTATCAAGTCACGATGCCCAACACCGTGATCTTGGCGGA
AGGGGGGTTATGGAGATTATCGACACGAGTAGTATGTAGCACTCAGCACG
ACGGATTTTGTTTTTGCCATGAACGCTACCGGAGACTTGTATTGCAGGGG
CGTTTGATATGTGTTGCTGTCGATTCTCGCTCGTCGTTGCCTTGAGCCTT
GTAGCCGATGTTCTACTACATTCACAGACACCCGAGAAAATAACACTCCG
TCTCGGGGGTGTTCTTCTTGTGACTCGACTCTACTATCCAGGTGGACGAG
TCAGGCTCTTTCCCCGTCGTCGTGCAACCGGAGACAGCGCCCGGCAGCGA
GCACACGCCAAGTGTCGACGAAAACGAAAGCGACGGCGACGAGGGCAGCG
ATGACAGTGATTTGTTTGGCAAGGGCGTGGACGGGGAATCCGACGGCGAG
GATGAAGAGGCAGGCGCGATGGACGCTGCCTCTGGGGGCGGTGGAGACAG
CAGTGCGAGCGGCGGCGGCGGCGGCAAAAAAGGCCGAGGGAAAAAAAGGA
GCCATAGGGGGGACAAAGGCGGCCCTCGCGACGGTGGCACGGGCGAAGAA
GGAGGAGAGGCGGAGGCGGGGGGAGAGCAAAGCGAGAGCTCGAAGCGCGG
CATGCTGCAACCACTGGTGCAGAAGAAGAAAGCGGCCAAGCGCAGGGCAC
AGCGCAAGAAAAAGGCCGCTGCCGCGAAAGAGGCGACCGCCGCCACAGCC
GCCGCCGCCGCCGCCGCCGCCGCAGGAGAGCTTCCCCTAGGAACGGCGCC
TCCTCCAGCCAGCGGCGGCAAGGAAAAGACACCCAAGAGAAAGCGGGGGA
AGTATGTCGTTGCTTCCAACAAGCGGCTGCGCGACGGCCAGGAGTAATAG
TCGAGCCACGAGGAAGAGGAGGGAGAAAGAGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6770:2958..7789+

>mRNA_L-elsbetiae_contig6770.15527.1 ID=mRNA_L-elsbetiae_contig6770.15527.1|Name=mRNA_L-elsbetiae_contig6770.15527.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2922bp|location=Sequence derived from alignment at L-elsbetiae_contig6770:2958..7789+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGGGAAGTACCGAGGGCACCAAGACAAGAGTCGGAGGGGCAGGGAGAA
GAAGCTTCTCAAGAAGAAAGGTGCGGCGGCAGGCGGGAGCGGCGGCGCCC
AACTCGAGACGGCCGACAGTAGTCCAGGCCGACCGCAGCAGCAACAGCAA
GTGGGAAACCCGGGGGCAGGGGGAAAGGCTGCGGGGGCGGGGGCGAAGAG
GAAGCTGAAGCATGTGACCTACGCAAAAGAGCACTCGGTGCTCATTTGTG
GAGACGGGGATTTTTCGTTCACTCGAGGAGTTATCCGCCACCGGGCAACT
GGATGGGGAAGTACCGAGGGCACCAAGACAAGAGTCGGAGGGGCAGGGAG
AAGAAGCTTCTCAAGAAGAAAGGTGCGGCGGCAGGCGGGAGCGGCGGCGC
CCAACTCGAGACGGCCGACAGTAGTCCAGGCCGACCGCAGCAGCAACAGC
AAGTGGGAAACCCGGGGGCAGGGGGAAAGGCTGCGGGGGCGGGGGCGAAG
AGGAAGCTGAAGCATGTGACCTACGCAAAAGAGCACTCGGTGCTCATTTG
TGGAGACGGGGATTTTTCGTTCACTCGAGGAGTTATCCGCCACCGGGCAA
CTGGAAAAGGCGTCGTAGCAACCTCTCTCGACTCCAGGAGAGCTGTCCTC
AAGAAGTACCCGCGTGCCGAAACCTGGCTCGCCAAGCTTGACGCTGACGG
GGCGCAGAAAAGGCGTCGTAGCAACCTCTCTCGACTCCAGGAGAGCTGTC
CTCAAGAAGTACCCGCGTGCCGAAACCTGGCTCGCCAAGCTTGACGCTGA
CGGGGCGCAGGTCGTCCACTCTGTAGACGCCACCAGGCTTGAGGAAACCT
TGCTGGGGAGCGGGGGGGGCGACGGGGTTGGCGGTGGCGGAGGAGAAGGG
AAAAAGCGGGTCTTGTTCGACCGCGTCGTGTTCAACTTCCCGCACACGGG
GAAGCAGAGGACGCACCTCAACCGGAATCTCATCCGCGACTTCTTCGCCA
GTACAAAGTCGTCCACTCTGTAGACGCCACCAGGCTTGAGGAAACCTTGC
TGGGGAGCGGGGGGGGCGACGGGGTTGGCGGTGGCGGAGGAGAAGGGAAA
AAGCGGGTCTTGTTCGACCGCGTCGTGTTCAACTTCCCGCACACGGGGAA
GCAGAGGACGCACCTCAACCGGAATCTCATCCGCGACTTCTTCGCCAGTA
CAAAAGGTTTGGTCAAGTGCGCCCCGCAGGGGGGAGAGGTGCACGTCACT
CTCAAGGACAAGCCTCCGTACTCCGGATGGAACGTGAAAGGTTTGGTCAA
GTGCGCCCCGCAGGGGGGAGAGGTGCACGTCACTCTCAAGGACAAGCCTC
CGTACTCCGGATGGAACGTGAAGGCGATGGCCAAGGAGAGCGAGCTGATC
TTGGTGAGGACCCTCGCTTTCGACCCGTCCGTGTTCCCGGGATACCGCCA
CAGCACGACCGACCCTCAGGGCGATGGCCAAGGAGAGCGAGCTGATCTTG
GTGAGGACCCTCGCTTTCGACCCGTCCGTGTTCCCGGGATACCGCCACAG
CACGACCGACCCTCAGGCCAAGGAGTTCGATGCAGGAGGCGCGAGGACGA
ACGTATTCTGCCGCGCGAGATCCCCGTTCGACGACAACGCCAAGGAGTTC
GATGCAGGAGGCGCGAGGACGAACGTATTCTGCCGCGCGAGATCCCCGTT
CGACGACAACGTGGACGAGTCAGGCTCTTTCCCCGTCGTCGTGCAACCGG
AGACAGCGCCCGGCAGCGAGCACACGCCAAGTGTCGACGAAAACGAAAGC
GACGGCGACGAGGGCAGCGATGACAGTGATTTGTTTGGCAAGGGCGTGGA
CGGGGAATCCGACGGCGAGGATGAAGAGGCAGGCGCGATGGACGCTGCCT
CTGGGGGCGGTGGAGACAGCAGTGCGAGCGGCGGCGGCGGCGGCAAAAAA
GGCCGAGGGAAAAAAAGGAGCCATAGGGGGGACAAAGGCGGCCCTCGCGA
CGGTGGCACGGGCGAAGAAGGAGGAGAGGCGGAGGCGGGGGGAGAGCAAA
GCGAGAGCTCGAAGCGCGGCATGCTGCAACCACTGGTGCAGAAGAAGAAA
GCGGCCAAGCGCAGGGCACAGCGCAAGAAAAAGGCCGCTGCCGCGAAAGA
GGCGACCGCCGCCACAGCCGCCGCCGCCGCCGCCGCCGCCGCAGGAGAGC
TTCCCCTAGGAACGGCGCCTCCTCCAGCCAGCGGCGGCAAGGAAAAGACA
CCCAAGAGAAAGCGGGGGAAGTATGTCGTTGCTTCCAACAAGCGGCTGCG
CGACGGCCAGGAGTAAGTGGACGAGTCAGGCTCTTTCCCCGTCGTCGTGC
AACCGGAGACAGCGCCCGGCAGCGAGCACACGCCAAGTGTCGACGAAAAC
GAAAGCGACGGCGACGAGGGCAGCGATGACAGTGATTTGTTTGGCAAGGG
CGTGGACGGGGAATCCGACGGCGAGGATGAAGAGGCAGGCGCGATGGACG
CTGCCTCTGGGGGCGGTGGAGACAGCAGTGCGAGCGGCGGCGGCGGCGGC
AAAAAAGGCCGAGGGAAAAAAAGGAGCCATAGGGGGGACAAAGGCGGCCC
TCGCGACGGTGGCACGGGCGAAGAAGGAGGAGAGGCGGAGGCGGGGGGAG
AGCAAAGCGAGAGCTCGAAGCGCGGCATGCTGCAACCACTGGTGCAGAAG
AAGAAAGCGGCCAAGCGCAGGGCACAGCGCAAGAAAAAGGCCGCTGCCGC
GAAAGAGGCGACCGCCGCCACAGCCGCCGCCGCCGCCGCCGCCGCCGCAG
GAGAGCTTCCCCTAGGAACGGCGCCTCCTCCAGCCAGCGGCGGCAAGGAA
AAGACACCCAAGAGAAAGCGGGGGAAGTATGTCGTTGCTTCCAACAAGCG
GCTGCGCGACGGCCAGGAGTAA
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