mRNA_L-elsbetiae_contig6754.15504.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6754.15504.1
Unique NamemRNA_L-elsbetiae_contig6754.15504.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig6754.15504.1 vs. uniprot
Match: D7G5T1_ECTSI (Oxidoreductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5T1_ECTSI)

HSP 1 Score: 608 bits (1569), Expect = 2.750e-205
Identity = 361/547 (66.00%), Postives = 394/547 (72.03%), Query Frame = 1 
Query:    1 LQGRVSQTARAAXXXXXXXXXXXXXXXXXXXXXXXXXXANPPSPATPSAPLPFSVVASTAPPT---------PKLFPRPCTSTTXXXXXXXXXXXXXXXXXXXXXXXXGVAP-QALPRELEVDVVVVGSGAGGGCAAGALAARGLRVAVLEKGGLYGAQDFAGFSEMEAYKKMYEGQGVLATDDGGVAILAGSCVGGGTTVNWAASFRTPRHVRLEWARKLGLKSFELGGPYDVALDAVCERLGVNTDHSHRAQGCPVPRDSLRVNQHQSSLWNGAAASGRLPRPVPRNAEGCVDCGSCLHGCAYGSKRSTHVTWLQDGLESGKIVLIPNAKVDKVLVDAGRAVGVEATVTPPGGVGEREGGKA--LTVRARAVVVSGGAINTPAILLRSGLKHPMIGRHLCLHPVLLVGGVFPEDYGTKNDSHGGDGGRGGDDSRRVRREREGLAVGESGRAEATAAAGKQAKSRGPAXXXXXXXXXXXXXXXXEAAVGGVCGREPGVGRGVMMGVYVQDLMRLDGGYGCVIEAPPAHPGLMGLVLPWNDALTHRY 1605
            ++ RVSQTARAA                          +NPPSPA+ S P  FS  A+ APP+         PK F RP + ++                          +P + LP++L VDVVVVGSGAGGGCAAGALAARGLRVAVLEKGGLYGA DFA FSEMEAYK MYEGQGVLAT+ G V ILAGSCVGGGTTVNWAASFRTPRHVRLEW+RKLGLKSFE GGP+D ALDAVC RLGVN  +SHRA G PVP  SLRVNQHQSSLWNGAAASGR+PR VP N + CVDCGSCLHGCAYGSK+STHVTWLQDGL+SG I+L+P+AKV++VL+DAGRA GVEA V+P GG      G A  LTVRARAVVVSGGAINTPAILLRSGLKHPMIGRHLCLHPVL VGGVFPEDY        G+ G G DD +R        + G S  A A   AGKQAKS     XXXXXXXXXXXX        G C R PGVGRGVMMGVYVQDLMRLDGGYGCVIEAPP+HPGLMGLV+PWNDALTHRY
Sbjct:  287 VKDRVSQTARAAAAVASTAPRPSTSLSANSH-------SNPPSPAS-SLPPSFSATAAAAPPSRVPAPEDVPPKFFSRPRSKSSGSAAATAGAFLPSSGTTSGSASAAPTSPHETLPQQLTVDVVVVGSGAGGGCAAGALAARGLRVAVLEKGGLYGAHDFARFSEMEAYKDMYEGQGVLATEGGAVVILAGSCVGGGTTVNWAASFRTPRHVRLEWSRKLGLKSFEPGGPFDDALDAVCSRLGVNIGNSHRAPGFPVPNASLRVNQHQSSLWNGAAASGRVPRAVPTNTKDCVDCGSCLHGCAYGSKQSTHVTWLQDGLDSGNIILVPHAKVERVLMDAGRATGVEAVVSPHGG------GMAASLTVRARAVVVSGGAINTPAILLRSGLKHPMIGRHLCLHPVLAVGGVFPEDYD-------GEHGAGEDDPKR--------STGGS-MAAAAGTAGKQAKSX----XXXXXXXXXXXXVGSGEGTNGSCPRVPGVGRGVMMGVYVQDLMRLDGGYGCVIEAPPSHPGLMGLVMPWNDALTHRY 799
[Close]
BLAST of mRNA_L-elsbetiae_contig6754.15504.1 vs. uniprot
Match: A0A6H5JQQ5_9PHAE (4Fe-4S ferredoxin-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQQ5_9PHAE)

HSP 1 Score: 463 bits (1192), Expect = 5.840e-152
Identity = 258/378 (68.25%), Postives = 277/378 (73.28%), Query Frame = 1 
Query:  118 NPPSPATPSAPLPFSVVASTAPPT---------PKLFPRPCTSTTXXXXXXXXXXXXXXXXXXXXXXXXGVAP-QALPRELEVDVVVVGSGAGGGCAAGALAARGLRVAVLEKGGLYGAQDFAGFSEMEAYKKMYEGQGVLATDDGGVAILAGSCVGGGTTVNWAASFRTPRHVRLEWARKLGLKSFELGGPYDVALDAVCERLGVNTDHSHRAQGCPVPRDSLRVNQHQSSLWNGAAASGRLPRPVPRNAEGCVDCGSCLHGCAYGSKRSTHVTWLQDGLESGKIVLIPNAKVDKVLVDAGRAVGVEATVTPPGGVGEREGGKA--LTVRARAVVVSGGAINTPAILLRSGLKHPMIGRHLCLHPVLLVGGVFPEDY 1215
            NPPSPA+ S P  F   A+ APP+         PK F RP + ++                         + P + LP++L VDVVVVGSGAGGGCAAGALAARGLRVAVLEKGGLYGA DFAGFSEMEAYK MYEGQGVLAT+ G V ILAGSCVGGGTTVNWAASFRTPRHVRLEW+RKLGLKSFE GGP D ALDAVC RLGVN  +SHRA G PVP  SLRVNQHQSSLWNGAAASGR+PR VP N + CVDCGSCLHGCAYGSK+STHV                    ++VL+DAGRA GVEA VTP GG      GKA  LTVRARAVVVSGGAINTPAILLRSGLKHPMIGRHLCLHPVL VGGVFPEDY
Sbjct:  411 NPPSPAS-SLPPSFPATAAAAPPSRVPAPEDVLPKFFTRPRSKSSGSAAATAGAFLPSSGTTSGRASAVPIPPHEPLPQQLTVDVVVVGSGAGGGCAAGALAARGLRVAVLEKGGLYGAPDFAGFSEMEAYKDMYEGQGVLATEGGAVVILAGSCVGGGTTVNWAASFRTPRHVRLEWSRKLGLKSFEPGGPLDNALDAVCSRLGVNIGNSHRAPGFPVPNASLRVNQHQSSLWNGAAASGRVPRAVPTNTKECVDCGSCLHGCAYGSKQSTHV--------------------ERVLMDAGRATGVEAVVTPHGG------GKAAPLTVRARAVVVSGGAINTPAILLRSGLKHPMIGRHLCLHPVLAVGGVFPEDY 761
[Close]
BLAST of mRNA_L-elsbetiae_contig6754.15504.1 vs. uniprot
Match: W7T4J7_9STRA (Long-chain-alcohol oxidase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T4J7_9STRA)

HSP 1 Score: 284 bits (726), Expect = 1.460e-82
Identity = 190/453 (41.94%), Postives = 229/453 (50.55%), Query Frame = 1 
Query:  322 RELEVDVVVVGSGAGGGCAAGALAARGLRVAVLEKGGLYGAQDFAGFSEMEAYKKMYEGQGVLATDDGGVAILAGSCVGGGTTVNWAASFRTPRHVRLEWARKLGLKSFELGGPYDVALDAVCERLGVNTDHSHR-AQGCPVPRDSLRVNQHQSSLWNGAAASGRLPRPVPRNAEGCVDCGSCLHGCAYGSKRSTHVTWLQDGLESGKIVLIPNAKVDKVLV-DAGRAVGVEATV----------------TPPGGVGEREGGKA-----LTVRAR-AVVVSGGAINTPAILLRSGLKHPMIGRHLCLHPVLLVGGVFPEDYGTKNDSHGGDGGRGGDDSRRVRREREGLAVGESGRAEATAAAGKQAKSRGPAXXXXXXXXXXXXXXXXEAAVGGVCGREPGVGRGVMMGVYVQDLM--RLDGGYGCVIEAPPAHPGLMGLVLPWNDALTHR 1602
            REL  DVV+VGSGAGGG AAG L A GL+V VLEKGG Y  +DFAGF E+++ + + E  G +   +  V+ILAGSCVGGGTT+NW ASFRTP HVR EW  K GL  F  G  YD ALDAV  RL +NT HSHR  +   VP  SL VNQ+   LW GA A G    PVPRN  GC DC  C  GC YG+K+ST  T+L+D   +G   L+  A VDKVL  D   AVGV ATV                 PP G   R G        L V A  AV++S G++++PA+LLRSGLKH  IGRHL LHPV  V G+FP +    +D+H                                                                             GV MG YV D M   +  G+G  IE PP+H GL G++ P+  A  +R
Sbjct:  274 RELSCDVVIVGSGAGGGTAAGVLTAAGLKVVVLEKGGYYSEEDFAGFGELDSERALCERSGWMGAQELSVSILAGSCVGGGTTLNWCASFRTPEHVRREWVDKHGLTCFG-GAEYDQALDAVARRLNLNTRHSHRNPEVASVP--SLVVNQNNERLWQGAKAVGARCLPVPRNVRGCEDCSGCERGCPYGAKQSTLRTFLEDAENTGNFKLVARAHVDKVLRNDDNDAVGVIATVHEERRLAEGRESDGEGRPPSG--HRPGPSTSSRYQLIVWAHHAVILSAGSLHSPAVLLRSGLKHHKIGRHLALHPVSGVAGLFPSET---SDTH----------------------------------------------------------------------------LGVGMGTYVSDFMGGEMKDGWGGAIETPPSHAGLAGVIAPYGTAFNYR 642
[Close]
BLAST of mRNA_L-elsbetiae_contig6754.15504.1 vs. uniprot
Match: K8YNZ6_NANGC (Glucose-methanol-choline oxidoreductase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YNZ6_NANGC)

HSP 1 Score: 241 bits (614), Expect = 8.090e-72
Identity = 145/290 (50.00%), Postives = 173/290 (59.66%), Query Frame = 1 
Query:  415 VLEKGGLYGAQDFAGFSEMEAYKKMYEGQGVLATDDGGVAILAGSCVGGGTTVNWAASFRTPRHVRLEWARKLGLKSFELGGPYDVALDAVCERLGVNTDHSHR-AQGCPVPRDSLRVNQHQSSLWNGAAASGRLPRPVPRNAEGCVDCGSCLHGCAYGSKRSTHVTWLQDGLESGKIVLIPNAKVDKVLV-DAGRAVGVEATV----------------TPPGGVGEREGGKA-----LTVRA-RAVVVSGGAINTPAILLRSGLKHPMIGRHLCLHPVLLVGGVFPED 1212
            VLEKGG Y  +DFAGF E+++ + + E  G +   +  V+ILAGSCVGGGTT+NW ASFRTP HVR EW  K GL  F  G  YD ALDAV  RL +NT HSHR  +   VP  SL VNQ+   LW GA A G    PVPRN  GC DC  C  GC YG+K+ST  T+L+D   +G   L+  A VDKVL  D   AVGV ATV                 PP G   R G        L V A  AV++S G++++PA+LLRSGLKH  IGRHL LHPV  V G+FP +
Sbjct:    1 VLEKGGYYSEEDFAGFGELDSERALCERSGWMGAQELSVSILAGSCVGGGTTLNWCASFRTPEHVRREWVDKHGLTCFG-GAEYDQALDAVARRLNLNTRHSHRNPEVASVP--SLVVNQNNERLWQGAKAVGARCLPVPRNVRGCQDCSGCERGCPYGAKQSTLRTFLEDAENTGNFKLVARAHVDKVLRNDDNDAVGVIATVHEERRLAEGRESDGEGRPPSG--HRPGPSTSSRYQLIVWADHAVILSAGSLHSPAVLLRSGLKHHKIGRHLALHPVSGVAGLFPSE 285
[Close]
BLAST of mRNA_L-elsbetiae_contig6754.15504.1 vs. uniprot
Match: A0A7S1UJN9_9STRA (Long-chain-alcohol oxidase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJN9_9STRA)

HSP 1 Score: 254 bits (648), Expect = 1.340e-71
Identity = 151/304 (49.67%), Postives = 186/304 (61.18%), Query Frame = 1 
Query:  337 DVVVVGSGAGGGCAAGALAARGLRVAVLEKGGLYGAQDFAGFSEMEAYKKMYEGQGVLATDDGGVAILAGSCVGGGTTVNWAASFRTPRHVRLEWARKLGLKSFELGGPYDVALDAVCERLGVNTDHSHRAQ---GCPVPRDSLR--VNQHQSSLWNGAAASGRLPRPVPRNAEGCVDCGSCLHGCAYGSKRSTHVTWLQDGLESGKIVLIPNAKVDKVLVDA-GRAVGVEATVTPPGGVGEREGGKA--LTVRARAVVVSGGAINTPAILLRSGLKHPMIGRHLCLHPVLLVGGVFPEDYGTK 1224
            DV+VVGS      AA  LAARGLRVAVLEKGG +  +DFA ++E +AY+  YE   +LA  D  + +LAG+CVGGGTT+NW ASFR P HV  EWAR  GL     G   + +LDAVC +LGV T  +HR +    C   + S    VN     L  GA A G   R VPRN +GCVDCGSC HGC YG+K+ T V  L++  E+G++ L P   VD V  +A G A GV A     GG      G A  L +RARAV+VS G++NTP +L RSGL+HP+IGRHL LHPV  V G F  +   K
Sbjct:  291 DVIVVGSXXXXXTAASVLAARGLRVAVLEKGGHFTEEDFAAWTEAQAYEHAYENAALLANKDASITVLAGACVGGGTTINWCASFRPPPHVLKEWARDFGLGDGLAG--LEASLDAVCAKLGVGTRFTHRHEHLSDCAAAQQSQAHVVNAANDFLVEGAHALGMPCRAVPRNVKGCVDCGSCSHGCVYGAKQGTLVL-LREAAETGRLALYPRTTVDYVTRNAAGAATGVHALREDDGG------GDAVPLRLRARAVIVSAGSVNTPKVLGRSGLRHPVIGRHLTLHPVTCVTGSFDRERNGK 585
[Close]
BLAST of mRNA_L-elsbetiae_contig6754.15504.1 vs. uniprot
Match: A0A7S0SPC3_9STRA (Long-chain-alcohol oxidase n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SPC3_9STRA)

HSP 1 Score: 247 bits (631), Expect = 5.460e-70
Identity = 137/299 (45.82%), Postives = 191/299 (63.88%), Query Frame = 1 
Query:  331 EVDVVVVGSGAGGGCAAGALAARGLRVAVLEKGGLYGAQDFAGFSEMEAYKKMYEGQGVLATDDGGVAILAGSCVGGGTTVNWAASFRTPRHVRLEWARKLGLKSFELGGPYDVALDAVCERLGVNTDHSHRAQGCPVPRDSLRVNQHQSSLWNGAAASGRLPRPVPRNAEGCVDCGSCLHGCAYGSKRSTHVTWLQDGL-ESGKIVLIPNAKVDKVLVDAGRAVGVEATV-TPPGGVGEREGG----KALTVRARAVVVSGGAINTPAILLRSGLKHPMIGRHLCLHPVLLVGGVFPE 1209
            +VDVVVVGSG+GGG  +  LA  GL V +LEKG  Y A+DF+ + E EA+ K +E  G+L ++DG +A+LA S VGGG+T+NW+ASF+TP HV  +W   LGL  F+ GG ++ +L  VC RLGVN   S+  +   V   +  VN +   LW GA   G  P  +PRN + CVDCG C +GC Y +K+ST    +   L +   + +I N +V+KV+++ G A G++  V T P   G         + + V+A+ VV S G+++TPA+LLRSGL HP+IGRHL LHPV+ VGGVFP+
Sbjct:  184 DVDVVVVGSGSGGGIVSSKLAEHGLSVLLLEKGSYYDAKDFSQWRESEAFSKAFERGGLLTSEDGSIAVLAASTVGGGSTINWSASFKTPAHVLKDW-ELLGLSIFKTGGEFEKSLSNVCNRLGVNDRCSYHHKH-EVDNHNYVVNNNNRLLWEGAVKLGYSPEKIPRNVKNCVDCGHCCYGCPYLAKQSTLTNSIAPLLLKKDNLRVISNCRVNKVIIEGGIATGIQGQVFTYPTTEGPIRPSPLSVRNIIVKAKIVVSSCGSLHTPALLLRSGLTHPLIGRHLALHPVVGVGGVFPD 480
[Close]
BLAST of mRNA_L-elsbetiae_contig6754.15504.1 vs. uniprot
Match: A0A7R9YDU7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDU7_9STRA)

HSP 1 Score: 243 bits (620), Expect = 3.210e-69
Identity = 140/300 (46.67%), Postives = 184/300 (61.33%), Query Frame = 1 
Query:  319 PRELEVDVVVVGSGAGGGCAAGALAARGLRVAVLEKGGLYGAQDFAGFSEMEAYKKMYEGQGVLATDDGGVAILAGSCVGGGTTVNWAASFRTPRHVRLEWARKLGLKSFELGGPYDVALDAVCERLGVNTDHSHRAQ---GCP-VPRDSLRVNQHQSSLWNGAAASGRLPRPVPRNAEGCVDCGSCLHGCAYGSKRSTHVTWLQDGLESGKIVLIPNAKVDKVLVD-AGRAVGVEATVTPPGGVGEREGGKALTVRARAVVVSGGAINTPAILLRSGLKHPMIGRHLCLHPVLLVGGVF 1203
            P     DVV+VGSGAGGG AA  L  +G RVAV+EKG  +G  +FA +SEM+A++  +E  G+L   D  ++++AGSCVGGGTT+NW+ASFR P HVR EW R  G+    L    D +   V + + +NT  +HR +   GC   P     VN++   L  GA + G   R VPRN +GCVDCGSC  GCAYG+K+ T +  L+D   +G + LIPN  VD V  D  GRA GV+      GG  E     +L + A AV+++ G+INTP IL RSGL+H  +GR+L LHPV  V GVF
Sbjct:  195 PAPKPYDVVIVGSGAGGGVAASVLTQKGFRVAVVEKGQHFGETNFAQWSEMQAFENAFEDGGLLTNGDKSISVMAGSCVGGGTTINWSASFRLPPHVRREWIRNFGIDW--LAEDLDASFAEVSKMMNINTAETHRHEKLHGCTDSPSLDHAVNKNNDFLVEGAYSLGMKCRAVPRNVKGCVDCGSCNFGCAYGAKQGT-LKILRDAARTGLLTLIPNTTVDAVQRDRTGRATGVKCVREADGGARE-----SLFLSAHAVIIAAGSINTPKILARSGLRHSSLGRNLSLHPVACVVGVF 486
[Close]
BLAST of mRNA_L-elsbetiae_contig6754.15504.1 vs. uniprot
Match: A0A7C1J7K6_9CHLR (Long-chain-alcohol oxidase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C1J7K6_9CHLR)

HSP 1 Score: 238 bits (608), Expect = 3.440e-67
Identity = 170/430 (39.53%), Postives = 212/430 (49.30%), Query Frame = 1 
Query:  325 ELEVDVVVVGSGAGGGCAAGALAARGLRVAVLEKGGLYGAQDFAGFSEMEAYKKMYEGQGVLATDDGGVAILAGSCVGGGTTVNWAASFRTPRHVRLEWARKLGLKSFELGGPYDVALDAVCERLGVNTDHSHRAQGCPVPRDSLRVNQHQSSLWNGAAASGRLPRPVPRNAEGCV---DCGSCLHGCAYGSKRSTHVTWLQDGLESGKIVLIPNAKVDKVLVDAGRAVGVEATVTPPGGVGEREGGKALTVRARAVVVSGGAINTPAILLRSGLKHPMIGRHLCLHPVLLVGGVFPEDYGTKNDSHGGDGGRGGDDSRRVRREREGLAVGESGRAEATAAAGKQAKSRGPAXXXXXXXXXXXXXXXXEAAVGGVCGREPGVGRGVMMGVYVQDLMRLDGG-YGCVIEAPPAHPGLMGLVLPWNDALTHR 1602
            EL  DVVVVGSGAGGG AA  LA  G  V V+EKGG +  QDF G  E  AY+K+YE Q VLAT D GV +LAGS +GGGT +NW+ASFRTP HVR EW R+     F     +  ALDAV  RLGVN   +  ++   +      + +    L  G          +P+N  GC    +CG C  GCA GSK+ST  T+LQD  + G   L+ NA V+KVL++ GRAVGV+  V           G++LT+RARAVV++ G+I++PAILLRSGL +P IG +L LHP   + G + E                                                                                EP   RG M+  YV  L  LDG  YG VIE PPAHPGL+GL LPW     H+
Sbjct:  167 ELACDVVVVGSGAGGGVAAAELARAGKHVIVVEKGGYHREQDFEGV-EFTAYQKLYENQAVLATRDLGVIVLAGSTLGGGTVINWSASFRTPEHVRAEWEREHACSEFTASA-FKAALDAVSARLGVNETEAWPSKQAQI------LERACDRLGLGCGV-------IPQNRVGCEAPGECGWCCFGCARGSKQSTLRTYLQDAAQHGAQFLV-NALVEKVLIENGRAVGVQVNVV----------GRSLTIRARAVVLAAGSIHSPAILLRSGLNNPNIGANLRLHPTFPIFGDYEEMI------------------------------------------------------------------------------EPW--RGPMLTRYVPHLNNLDGQHYGVVIEHPPAHPGLIGLGLPWLSGAQHK 490
[Close]
BLAST of mRNA_L-elsbetiae_contig6754.15504.1 vs. uniprot
Match: A0A7C4LBQ9_9CHLR (Long-chain-alcohol oxidase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C4LBQ9_9CHLR)

HSP 1 Score: 229 bits (585), Expect = 7.620e-64
Identity = 143/307 (46.58%), Postives = 184/307 (59.93%), Query Frame = 1 
Query:  301 VAPQALPRELEVDVVVVGSGAGGGCAAGALAARGLRVAVLEKGGLYGAQDFAGFSEMEAYKKMYEGQGVLATDDGGVAILAGSCVGGGTTVNWAASFRTPRHVRLEWARKLGLKSFELGGP-YDVALDAVCERLGVNTDHSHRAQGCPVPRDSLRVNQHQSSLWNGAAASGRLPRPVPRNAEGCV---DCGSCLHGCAYGSKRSTHVTWLQDGLESGKIVLIPNAKVDKVLVDAGRAVGVEATVTPPGGVGEREGGKALTVRARAVVVSGGAINTPAILLRSGLKHPMIGRHLCLHPVLLVGGVFPE 1209
            + P      L  DVVVVGSGAGGG AA  LA  G  V VLEKGG Y  +DF    E  AY+++YE Q VLAT D GV +LAGS +GGGT VNW ASFRTP HVR  W R+       L GP +  +LDAVC RLGVNT+ S  +       ++  + +   +L  G          +P N  GC     CG C  GCA G+K+ST  T+L+D  ++G  +++  A+  +VL++AGRAVGVEA            G   LTVRARAVV + GA++TPA+LLRSGL++P +GRHL LHP   V G++P+
Sbjct:  159 ILPVTADATLACDVVVVGSGAGGGVAAAELARAGCDVIVLEKGGYYAEEDFDAV-EFNAYQRLYENQAVLATRDLGVVVLAGSALGGGTVVNWGASFRTPDHVREAWEREHACAG--LAGPEFTASLDAVCARLGVNTEESWASA------EARLLERACDALGLGCGV-------IPVNLRGCAAPETCGWCTFGCARGAKQSTARTYLRDAAQAGARIVV-GAEARRVLIEAGRAVGVEAVA----------GTCTLTVRARAVVSAAGALHTPALLLRSGLQNPNLGRHLRLHPTAAVLGLYPD 438
[Close]
BLAST of mRNA_L-elsbetiae_contig6754.15504.1 vs. uniprot
Match: A0A1V2ICD3_9ACTN (Long-chain-alcohol oxidase n=1 Tax=Frankia asymbiotica TaxID=1834516 RepID=A0A1V2ICD3_9ACTN)

HSP 1 Score: 225 bits (573), Expect = 3.570e-62
Identity = 143/297 (48.15%), Postives = 172/297 (57.91%), Query Frame = 1 
Query:  331 EVDVVVVGSGAGGGCAAGALAARGLRVAVLEKGGLYGAQDFAGFSEMEAYKKMYEGQGVLATDDGGVAILAGSCVGGGTTVNWAASFRTPRHVRLEWARKLGLKSFELGGPYDVALDAVCERLGVNTDHSHRAQGCPVPRDSLRVNQHQSSLWNGAAASGRLPRPVPRNAEGC---VDCGSCLHGCAYGSKRSTHVTWLQDGLESGKIVLIPNAKVDKVLVDAGRAVGVEATVTPPGGVGEREGGKALTVRARAVVVSGGAINTPAILLRSGLKHPMIGRHLCLHPVLLVGGVFPED 1212
            + DVVVVGSGAGGG AAG LA  GL V VLE+GG Y   DF G  E+    ++Y   G   T +G VA++AGSC+GGGT VNW  SF TP  +R +WA   G K F+ G  +  ALDAV  RLGVN DH     G P  RD +        L  G  A G     +PRN  GC   +DCG C +GC  G+K+S   TWL D    G  +++ N  V +V V  GRAVGV          G    G A+TVRARAVVV+ GAI TPA+L RSGL +P IGRHL LHP   V GV+ E+
Sbjct:  165 DCDVVVVGSGAGGGTAAGVLAGAGLDVVVLERGGYYDDADFDG-GELSGLSRLYAA-GPAVTTEGQVALVAGSCLGGGTVVNWTTSFPTPPDIRAQWAAH-GAKQFD-GDEFSEALDAVARRLGVNLDH-----GAPSARDQV--------LERGLRALGWHVDEMPRNVAGCDMGIDCGRCGYGCRLGAKQSVTKTWLADAQAHGARLVV-NVDVRRVDVRGGRAVGVR---------GVSRDGHAVTVRARAVVVAAGAIQTPALLRRSGLSNPNIGRHLRLHPATAVWGVYDEE 434
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6754.15504.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5T1_ECTSI2.750e-20566.00Oxidoreductase n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A6H5JQQ5_9PHAE5.840e-15268.254Fe-4S ferredoxin-type domain-containing protein n... [more]
W7T4J7_9STRA1.460e-8241.94Long-chain-alcohol oxidase n=2 Tax=Monodopsidaceae... [more]
K8YNZ6_NANGC8.090e-7250.00Glucose-methanol-choline oxidoreductase (Fragment)... [more]
A0A7S1UJN9_9STRA1.340e-7149.67Long-chain-alcohol oxidase n=1 Tax=Phaeomonas parv... [more]
A0A7S0SPC3_9STRA5.460e-7045.82Long-chain-alcohol oxidase n=1 Tax=Chromulina nebu... [more]
A0A7R9YDU7_9STRA3.210e-6946.67Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7C1J7K6_9CHLR3.440e-6739.53Long-chain-alcohol oxidase n=1 Tax=Chloroflexi bac... [more]
A0A7C4LBQ9_9CHLR7.620e-6446.58Long-chain-alcohol oxidase n=1 Tax=Chloroflexi bac... [more]
A0A1V2ICD3_9ACTN3.570e-6248.15Long-chain-alcohol oxidase n=1 Tax=Frankia asymbio... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6754contigL-elsbetiae_contig6754:353..10619 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score611.7
Seed ortholog evalue3.3e-172
Seed eggNOG ortholog2880.D7G5T1
KEGG koko:K17756
Hectar predicted targeting categorymitochondrion
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0044464,GO:0055114
EggNOG free text desc.long-chain-alcohol oxidase activity
EggNOG OGs2QSD8@2759,COG2303@1
Ec32 ortholog descriptionoxidoreductase
Ec32 orthologEc-12_008980.1
EC1.1.3.20
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons9
Model size1608
Cds size1608
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816748.15882-CDS-L-elsbetiae_contig6754:352..4441622816748.15882-CDS-L-elsbetiae_contig6754:352..444Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6754 353..444 -
1691683783.6262012-CDS-L-elsbetiae_contig6754:352..4441691683783.6262012-CDS-L-elsbetiae_contig6754:352..444Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6754 353..444 -
1622816748.1735709-CDS-L-elsbetiae_contig6754:962..11281622816748.1735709-CDS-L-elsbetiae_contig6754:962..1128Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6754 963..1128 -
1691683783.637881-CDS-L-elsbetiae_contig6754:962..11281691683783.637881-CDS-L-elsbetiae_contig6754:962..1128Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6754 963..1128 -
1622816748.183863-CDS-L-elsbetiae_contig6754:2029..23201622816748.183863-CDS-L-elsbetiae_contig6754:2029..2320Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6754 2030..2320 -
1691683783.6470146-CDS-L-elsbetiae_contig6754:2029..23201691683783.6470146-CDS-L-elsbetiae_contig6754:2029..2320Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6754 2030..2320 -
1622816748.1961985-CDS-L-elsbetiae_contig6754:3888..39811622816748.1961985-CDS-L-elsbetiae_contig6754:3888..3981Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6754 3889..3981 -
1691683783.6562998-CDS-L-elsbetiae_contig6754:3888..39811691683783.6562998-CDS-L-elsbetiae_contig6754:3888..3981Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6754 3889..3981 -
1622816748.2088609-CDS-L-elsbetiae_contig6754:5609..56691622816748.2088609-CDS-L-elsbetiae_contig6754:5609..5669Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6754 5610..5669 -
1691683783.66661-CDS-L-elsbetiae_contig6754:5609..56691691683783.66661-CDS-L-elsbetiae_contig6754:5609..5669Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6754 5610..5669 -
1622816748.221978-CDS-L-elsbetiae_contig6754:6679..68831622816748.221978-CDS-L-elsbetiae_contig6754:6679..6883Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6754 6680..6883 -
1691683783.6769161-CDS-L-elsbetiae_contig6754:6679..68831691683783.6769161-CDS-L-elsbetiae_contig6754:6679..6883Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6754 6680..6883 -
1622816748.2367928-CDS-L-elsbetiae_contig6754:8358..85591622816748.2367928-CDS-L-elsbetiae_contig6754:8358..8559Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6754 8359..8559 -
1691683783.6893368-CDS-L-elsbetiae_contig6754:8358..85591691683783.6893368-CDS-L-elsbetiae_contig6754:8358..8559Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6754 8359..8559 -
1622816748.254005-CDS-L-elsbetiae_contig6754:9497..96651622816748.254005-CDS-L-elsbetiae_contig6754:9497..9665Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6754 9498..9665 -
1691683783.7059479-CDS-L-elsbetiae_contig6754:9497..96651691683783.7059479-CDS-L-elsbetiae_contig6754:9497..9665Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6754 9498..9665 -
1622816748.2647603-CDS-L-elsbetiae_contig6754:10286..106191622816748.2647603-CDS-L-elsbetiae_contig6754:10286..10619Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6754 10287..10619 -
1691683783.7191634-CDS-L-elsbetiae_contig6754:10286..106191691683783.7191634-CDS-L-elsbetiae_contig6754:10286..10619Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6754 10287..10619 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6754.15504.1prot_L-elsbetiae_contig6754.15504.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6754 353..10619 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6754.15504.1

>prot_L-elsbetiae_contig6754.15504.1 ID=prot_L-elsbetiae_contig6754.15504.1|Name=mRNA_L-elsbetiae_contig6754.15504.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=536bp
LQGRVSQTARAAAAAAAAVGSSSLSPSKLLPTSSSNNNANPPSPATPSAP
LPFSVVASTAPPTPKLFPRPCTSTTTTTTRSNAAGAALPATPADNCGSCG
VAPQALPRELEVDVVVVGSGAGGGCAAGALAARGLRVAVLEKGGLYGAQD
FAGFSEMEAYKKMYEGQGVLATDDGGVAILAGSCVGGGTTVNWAASFRTP
RHVRLEWARKLGLKSFELGGPYDVALDAVCERLGVNTDHSHRAQGCPVPR
DSLRVNQHQSSLWNGAAASGRLPRPVPRNAEGCVDCGSCLHGCAYGSKRS
THVTWLQDGLESGKIVLIPNAKVDKVLVDAGRAVGVEATVTPPGGVGERE
GGKALTVRARAVVVSGGAINTPAILLRSGLKHPMIGRHLCLHPVLLVGGV
FPEDYGTKNDSHGGDGGRGGDDSRRVRREREGLAVGESGRAEATAAAGKQ
AKSRGPAGAKSRQKTDAAARSGSEAAVGGVCGREPGVGRGVMMGVYVQDL
MRLDGGYGCVIEAPPAHPGLMGLVLPWNDALTHRY*
back to top

mRNA from alignment at L-elsbetiae_contig6754:353..10619-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6754.15504.1 ID=mRNA_L-elsbetiae_contig6754.15504.1|Name=mRNA_L-elsbetiae_contig6754.15504.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=10267bp|location=Sequence derived from alignment at L-elsbetiae_contig6754:353..10619- (Laminarionema elsbetiae ELsaHSoW15)
CTCCAGGGCCGGGTGTCCCAGACTGCCAGAGCAGCGGCGGCGGCGGCGGC
GGCGGTGGGGTCCTCGTCCTTGTCTCCATCGAAGCTCTTGCCGACAAGCA
GCAGCAATAACAACGCCAATCCGCCGTCCCCCGCGACGCCATCGGCACCC
CTGCCCTTCTCGGTGGTAGCATCCACGGCGCCCCCCACTCCCAAGCTGTT
CCCTCGCCCCTGTACAAGCACCACCACCACCACCACCAGGAGCAACGCAG
CCGGTGCAGCTCTTCCCGCCACCCCTGCTGACAACTGCGGTTCGTGTGGG
GTCGCACCGCAAGCCCTGCCGCGGGAGCTCGAGGTGAGTGGGAGAGAGCC
TTGATTGTTCGGGTGAGCAGGTTGGGGGAGTTGCATACCGGCAAGGCTGA
GGCTTTACTCGGCACGAGGGGTTCCAGCAGCTACGAAAGGCGTTGTGATT
GCTATCAGTATGTAGCCGCATTGTTTATGTTTGTACAGGCTTCGTATCAT
GTTATTGGTGGTGGTGGTGGTGGTGTTGTTGTCTCTTCACCATTAAAAAC
CGTTCCGATCTCTCCACCCGTGCCACTGTACCTCCCTATGTCCGTACTAC
GTATTCCAACACTCGCTGCGGTCACTGTACCTCCCTATGTCCGTACTACG
TGTTCCAACACTCGCTGCGGTCACTGTACCTCCCTATGTCCGTACTACGT
GTTCCAACACTCGCTGCGGTCAATTCCCGTGGTCACAGGCTCCACACGCA
TACCTAAAAAAGGGTACCATACACGAAAATAAAATGGACCCGAAGAGTCA
GTCAGCAAAAAAAAGCGATAATAAGAAATCGGAGGAAAAAGTGCAAGAGA
AAAAAGAAAAAATATGTATCACCACACTCGTGTTCGAAATCAATTTTATC
GAGGGTTGTTGTGCGTGTGCGTGTTTCTTGTTCTTGTCCTTGAATCGAGA
CAAGGTGGACGTCGTGGTGGTAGGAAGCGGAGCTGGCGGCGGGTGTGCGG
CCGGCGCGCTGGCGGCCAGGGGCTTGAGAGTCGCCGTGCTGGAGAAGGGG
GGGCTGTACGGTGCCCAGGACTTCGCGGGGTTTTCCGAGATGGAGGCGTA
CAAGAAGATGTACGAGGGGCAGGTGGGAGAGAAGCTGGGAGGCGTTTTCC
CAACGAGTGGCGTCTGGAGATATATATATTTTTTTTTTGCGTCGTGTTTG
CAGCTGGTTTGTTGGCCCAACCGGCAGCACGGCCCCTCACTAAAGCTACA
ACGCTACAGCATCGGGATGTCCAGTTACCATCCTTCTTTTATCTTGATAC
TCGACGCCAACGTCTGTCACGGGCTTTGGCACTACGTAATGGTAGCAGCA
GCAGCAGCAGTAGCACAACGCATCCCTTGTCTGTTCGCTGTCGCTAACAC
AGCGTAGTCAAGGATTTGGTCTCAGGGGAACTTGTGGTCGGCCGTATTGG
TTCTCGCTGGTGCGGAGTAACCGCTTTTTTAGTTCGGAAGTAGTTACACC
GCCTTCTGAATGCCGGGGGGTTCGGATGTTGACTGGTTTTTTAGGGTTCT
CCGAGTTTGTTTTTAGTTTTTAGTTTTTAGTTTCGAGAGCAGATGCGGGC
CAAAGCGCCCCCTCTCTCTCACCCTCATCGTCTACCATCTAACCATCAAA
GCCTGGCCTATATAGAGTCACCAGCACAACGTCTTCGATCTCCAGCACCT
CACACACACACTTCATTGTTGACGACGGTGGGGAGTGCTGAACCCTGCCC
TCTCGCGATAAAAATATCTGAGGCAGGCACCGCAGGAGGGGGTCCAACCC
CCCCCTCCTGTGTGACCCCGGTTGGGTCGTCTAGCTAGTCGTAGTGGAGG
AAGGGGGCCAGTGGGGCAGACGACGAATATGCCAATGATGCGCGGGAAAA
AAACACACACACACCAGCGTGCTAACCCGTGCCGAGTACTGGCCTCGGTA
TCTCCCCAAGTCTGCACATCAGTCGGAGACACACCGCATTTGTCCTGACA
ACGTCCTAACACATATCAACGCGATATGCATGTATGTACCTGTACTGCAA
TTAACAATAGGGGGTTCTGGCGACGGACGATGGGGGGGTGGCCATTCTCG
CGGGCTCCTGCGTCGGGGGCGGCACGACGGTGAATTGGGCCGCCAGCTTC
CGCACGCCCAGGCATGTTCGGCTGGAGTGGGCCAGAAAGCTCGGCCTGAA
GAGCTTCGAGCTAGGCGGGCCGTACGACGTTGCCCTGGATGCTGTCTGTG
AGAGGCTCGGGGTGAGTGTATTTAGGGTTAGGGTTACTTCGGGCTAGGGT
TAGTAATGCGAGAAGCAACAACAACAACAACAACGTCATGCCATACTTCA
GTAGACACAGTTTAAAGGTAAAGAGGTGTCTGTCTGCTGCGAGGAGGGTA
GGCATGTACCGTAATCATGCGAGTCATCGCACCCCCCCGTACCGATTTTG
AAAGCTCGATTGCTCCTTGACGAAGAGGGTGCCAACACCAGACGGCACGT
GTTAAAAGACAGCTCTCGACGTGATCATCCCAATGCCACCCTTTTCGTTG
CCGGCACCCCAATTCGTTAAGGCGTAGTCGAGCTTTGAAAATCGGTATGG
GGGGGTGCGATGACTCGCATGATTACATGATTATGGTATCCTATAGATAC
CAGTCTGTACTTGGGAGGTTTTGTCGGGGTGCCAGGCTGTGCACGTATAC
GGAAGATAAGGCGAAAGGAAAACAACACAACAGGGAAGAAAATGGGCTAC
CGTAGGTGAAATAAGATAAGACACCCCCTGGACCGAGATTGAAAGCTTGG
TTAGTCCGCAACGAATACGATTCTAACCACAAACGCCACATTTTCGGACA
GCTCTCGACGAGACCTTTCCAACGCCGCCCTTTTCGGGACTGACGCTCTG
CTTGCTTTGGAGTACTTGAGCTTTGAAAATCGGTCCAGGGGGTGTCTTAT
CTTATGTCACCTACGGTATCCACCCATACATCTATGAGCAACCGCGCGAA
AATGGCCGTGATGCACTCCACATTCGATGCACCGCTGCCGAATAACCCCA
GCACCACCGGCTACCGTAGGTGACACAAGATACCACACCCCCTGGACCGA
ACTTTAGAGCTCCATTATTCCGTAACGAAGAAGGTGCCAGCACCAAGCAA
CACATGTTCGGACAGCCCTCGACTAGATCTTTCCAATGCCACCTCTTTCG
GCACTGGCATTCTTCTTGCTGGGGAGGAATCGAGCTTTGAAAATATGTCC
GGGGGGGTGGTATCTTGTGTCACCTACGGTTATGCAGCTGCCAACACGGG
GGTGAGGGCGACACCCATGTATGCAAGGTATCTCGCCAATGCTACAACAG
TGCCCTATATGACGAAGGATGAAGGCCGGAGACGTCGATGATAGTGGGCA
AGATCAACATGATGTTGGACAAGATGAACACCGAAGACGAACAGCCGCCC
CAATTGGCAGTGGCCTCTAGCTTTCACTTCAGCTCACCAGCGCAACTTCT
GCTGCGACAGGCCTTGAGCAGGGTCAAAATCCTTACTAGGTTACGAGACC
ATGTAGACTAGACTAGATTGGATCTTAGGGCTAGGGTTAGCTCTCTAGTC
CAAAACATCCTTGGGGGCCCGTGGTCACAAAACAAGGCACACTCGACGCC
GCGGAAGAAAAAACAGTATGACGTGGCATGGCATGGCATGGCATGGCTCG
AGCTAATTACCCACGCTATCCCCTCCCCGCTCTCAGGTCAACACCGACCA
TTCGCACCGGGCTCAAGGGTGCCCCGTGCCTCGCGATTCGCTGAGAGTGA
ACCAGCACCAATCGAGTCTCTGGAACGGCGCAGCCGCTTCCGGTCGTCTT
CCAAGGCCGGTTCCCAGAAATGCGGAAGGGTGCGTGGACTGCGGCAGCTG
CTTGCACGGCTGTGCGTATGGCAGCAAGCGGTCTACTCATGTGAGTAGGG
TGGTGGTGCTTTTCTGAGAGATGAGAATGAAGATGAGAGTGGTTGTTTTT
GGGTGGTATAAGAGGGATGGTTTATTTGAACGGCCTACTCACGTGAGGAT
GACGATACTTTTGGGAGTGATGCCGTAGGTGACACAAGATATCACACCCC
CTGGACAAATTTTCAAAGCTCGATTCCTCCCCAGCAAGAAGAGTGCCAGT
GCCGAAAGAGGTGGCATTGGAAATATCTTAGTCGAGGGCTGTCCGAACAT
GTGTTGCTTGGTGCTGGCACCTTCTTCGTTACGGAATAATGGAGCTCTAA
AGTTCGGTCCAGGGGGTGTGGTATCTTGTGTCACCTACGGTAATGAAGAC
GGCAGTGACTGTTTTTGCGTGGAAGAAGAGAGGTGGTTCAACTGTGAACT
GTGTGTATCACAGGTGGAAGCCTTCTGGAGCAGGAACGGGTTGAATTATG
AACAAGTATGATTTGTCCACTTTTGTTTTCACCTCGCATAGCGTGTAGAG
GGGAGCGAAGGGCTCCAGACTAAATGTATCTGATCTCTTGTTTTGTAATT
TGTGGGCCCCTCGGGTCCATTTTATTTCTTTTATTTTTCAGTAGTCTATA
CCCTTTTAGGGTGAGAGTTATCCTGTGACCACGGGAATTGACCGCGTCTG
TGTTGGACTAAATAGTACGGACTCACGGAGGTGTACTGGATAGAGAGATC
GGAACGGTTTTTAATGTGAAGACAACACCAACAACAACCACAACATGATA
TATTTATTTTCATAATTCAAAAATTATATTTACTCCTATTATAGATAATG
AACTTGATTTTCTTAAAAATATATAAATAATTAAATGATTATATATAATA
AACTAAGCTGTAATGAATCTGATTCTCCTTTTCGTACGAGTTTGGTTGTG
TTTCTATGGCCTCTCTCACGCGACCCTTTGCTTCGCCTCTCGCGTTTCGC
TCCCGTTGTCGTGTGGCGCACACATGAACGGATCAACGAAACGGATGAAG
GTTACATGGCTGCAGGACGGACTGGAGTCGGGCAAGATCGTCCTCATTCC
TAACGCCAAGGTACTTTTTCTTCTTCTTCTTTTGACATGTATTTCCAGTG
CTCGATGAGCTCCTTGCCACGAGGTGTGCATCTTGCCAGAGCACTGGACC
GTGGTCACACAGAAGGGATCCTTTCCCCGAGGCCGGCCCCCACTCCCCCC
TTCTGCGGTGCCCCCCTTAAGATTTTTTGTCGCGAGAAGGGTCCAGCCGT
CCCTTTCCCTCGCCGACGGTGAGGTCGACGCTAAGGTATGTGGTGGGCAA
ATGACGATTGATTGGTGATGGTGATGGGTGATGTTGATCAACGACAGCAG
TGATCGGTAATGGTGGTACGAACATACCGCCGTAGGTGACACAAGATACC
ACACCCCCCTATAGACACATCCTCAAAGGTCGATTCCTCCTCGGCAAGAA
GGGTGCCAGTGCCGAAAGGAGTGGGCGTGTGGAAGGATCAAGTCGAGGAT
CTGTCCGAAAACGTGTCGTTTAGTGTTGTAGGCACCTTCTTTGTTACGGA
GTAATGGAGCTCTAAAAGTCGGTCCAGGGGGTGTTGTTGTTGTTGTTGTT
GTTTCTCGAATTAGCTCTGTAGTCTAAAACATCCTTGGGGGGCCGTGGTC
ACAAAACACTTAAGGGGGCACACTCGACGCCGCGGAAGAAGAATAAAACA
AAAATATGGTACATACGCGCCCGGTGGTACTAAACTGGCCCCCGGGGGGT
CTTGCGTCTCGCCAGCACAAAATCAAAGGTATAGTACATACTACTCGGAA
GAGAAAATAAAAGAAAGTTCGAAAAAGCAGACCAAATAAATACCAAATAC
CACGCTGATATCTTGTGTCACCTACGGTAAGCATACAGCTGACGGTCGGA
GGCACCGCACGCCGCGTCGTCGCCGAAGGTATGTATGTATGTAGGTATAC
TTGTCATGGTCTCGGGTTGGCCCCCATTTTCCCGGGCGTCTTTCGTGTTG
GCATCCTGGCCTCGTTGCCTGGCCCTGCACAGGTGCCCCAGAGCATCTTC
TTTTGGGGGTGGCCTGCGCGGGCGTTATTTATTTTGCGTTTGCCAGTAGT
CCCGTGGAATTTGGCCCCTCGAGCACCTCCATCTCGGTGCAGGCCTTCAT
TCGCTGCTGGCCTACTAGTCCCGACGCGTATTGTTGTTGTTGTTGTTGCT
GTTGTTGTTGTCTTCACGTTTAAAACCGTTCCGATATCTACTGCATGAGT
CCGTCATATTCCAAGACTTGACGCGGTCGGTTCCCGTGGTCGCAGGATAA
CGTACCCTAAATGGGCAAACACAACTGAAAAATGAAAAAACATGCACCTT
ATTTGTTACCACCCGTATACCTTATTTGTGTACCTTATTTGTTACCCCAC
CCGTATACCTCATTTGTTACCCCACCCGTGTACCTTAATTGTTTCCCCAC
CCGTGTACCTTATTTGTTACCCCACCGCTCCGTCGCTTCGTTCGCGCTGC
ACTTGCATACGTGCGTGCCTAATCTAACACCAGTAGCCCCCTGTGCTTGC
TTACCCACCGAACTTAAAACATCAATGAACCGTTACTGCTCTAAAGGTCG
ACAAACTAAAAAACATTAATAAAACGTTACGGCTCTCAATTTTTCTCCGA
ACTTGAAAAAATATTGATGAAACGTTTCGGCCCTAAAGGTCGACAAGGTC
CTAGTGGACGCTGGCAGAGCCGTTGGAGTCGAGGCAACGGTTACCCCACC
CGGAGGAGTCGGAGAAAGAGAAGGAGGAAAGGTAGGAAGTGTCCCTCCGC
TCGATTTTTCCGTTTCCGAGCCGCACTTGTTGTTTCTGGCATTAAGTAGC
TCTCTATTGTAGTCCAAAAACATCTTTGGGGGGGGGGGGGCGTGGTCACA
CAGACAGGGCAGGCACACTCGACGCCGCGGAAAAAAAATGAAACATATGT
ACGCGCTGGGCGTGGCTGGCTGGCTCCCTTAACTTGTGTGTGTGTGTGTG
TGTGGGGGGGGGGGGGGGGGGGGGGGGGGTTGTGTTTGTTTTTGGTGTTG
TTTTTTTTTTTTTATTTTTGTTTTTTTTGNNNNNNNNNNTCGGACAGAAA
TAGAACTGGTTGCGCCGGGGGTGGGCTTGCGTTTGGGGTGCTCCGACTTT
GTGGGTCGGGCTTGTGGGGGGGGGGGGGGGGGGATGAGGAGTGTGTTTGT
GTTTGTTTTTGGTGTTGTTATTTTCTTCCCATTATTGGCTTATTCGTCGC
CTGCCCCACTGGCCGGCTCCCTTCCTCCACTACGACTAGCTAGACGACCC
AACCAACCAGGGTCAACCACCCGGGGTCAGTGTGTGTGTGTGTGTGGTAT
TTCGTCTACCGTAGGTGACACAAGATACCACACCCCCTGGACAGATTTTC
AAAGCTCGATTCCTCCCCCGCCAGAAGAGTGACAGTGCCAGAAAGGGTGG
CGTTGGAAAGATCTAGTCGAGGGCTGTCCGAAAATGCGTCGTTTGGTGCT
GACACCCTCTTCGTTACGAAGTAATGGAGCTCTAAAATTCGGTCCAGGGG
GTGTGGTATCTTGTGTCACCTACGGTAATCTTTTCTCGGTGTGCCGCGCG
TTTCGGTGGGGTGTACTGCACGTTTCCGGTGCGTGCTATGTCTCTACAAC
GAGACGCATCTACCCGCCGAGGTCACACAGGAGGGGGTAGGGGGGGATAG
GGGGGGGTACCCACTGGGCTTTATTCTTGTGCGTCGTGATAAAACATGTA
TGTACCAGTATGTATTTACGTTGTTTTTTTGTTTTATTTTTGTTCCTCCC
ATCATATTGGCATATTTGTCGTCTGCTCCACCGGTCCCCTTCCTCCACCA
TGACTAGCTAGACGACCCAACCGGGGTCCCGTCACACAGGAGAGGATGTA
TGAAAGTGGGTAGTTGTTCTTTCTGTATTGCGATCCCCCCACCACATCCG
ATCGTATGATGTGATTCAAGCCTGGCCTGAACCGCTTCAGTCAACAGTGA
ACCGTGAGCCAAAGAGTGTGTGTTGGCTGTTGATGTTGCCGGGCTACTCA
GATGATTGGATCGGGTTCTACCGTTTTTAATGTGAAGACGACAACAACAA
CAACAACAACAACAACAACAACAAAAACGACAACAACTGTTTTTATTGTG
AAGACAACGACAACCACAACAGCAACAACGACAACTATTTTTAATGTGAA
GACAACGACAACCAACAACAACCATTTTCAATGTGAAGACAACGACAACC
ACAACAACAACGACAACTATTTTTAATGTGAAGACAACGATAACCACAAC
AACAACAACAACAATCATATCGTGAACGCGTGTGATGCGACGATCACAGG
CCCTCACGGTTAGAGCGAGGGCGGTGGTCGTATCCGGCGGCGCGATCAAC
ACCCCGGCCATCCTCCTGCGCTCCGGGCTGAAGCACCCCATGATCGGCCG
GCACCTCTGCCTCCACCCTGTGCTCCTGGTGGGAGGCGTGTTCCCGGAGG
ACTACGGGACGAAAAACGACTCTCACGGTGGAGATGGAGGAAGAGGCGGA
GACGATAGTCGTCGCGTTCGGCGGGAGCGCGAGGGCCTAGCCGTTGGCGA
ATCCGGGCGAGCTGAGGCGACCGCTGCTGCCGGGAAGCAGGTCTGTTGCT
TTGATTTGATTTGCCTTGCTGCTTTGCTGTTCGAGTTGCTTTGATTTGAT
TTGATTTGCCTTGATTTGAGTGGATTTGCCTTGCTTTAGCTTTGCCTTGC
TGTGCCGTGCTGTGCTGTGCTGTGCTGTGCTTTGCTCTGCTGTTCGAGTT
GCACAACACTATGAAGTTGCCGAGGGCAGCGCGACAGAACAGCTGTCACG
CTGAACAGCCAGAACTAACGCATGTCGCCACGTGCGTCGCCAGCCTGAAA
AGTCTCCTGAAAAGCCTGGATCCAGTGCCCTTAAGTGGCTCGACCAACAG
CCCACACAGACCCTGCATCCCGGGAAAATCAAAGCTACACATGTGTCTCT
ACTTCGAAACATAACCCTCTGCCAGGGCTCTTGAGTTTACCACCACTACA
AACCACCATATTTTCCTGGGTATTCGTCGGAATTTTCCCGACGTGTTTTC
CCGTCCACGGTTCAATAGGCGGATCCGGTACGAGGCGGGATTCCCGCCAT
AATTCGCGGAACCGGGAAAAATGTTCCCGCCCAAAAAACCGGTCCCGACG
AATACCATCATACATATCTTCCCCCTTTTTCTCGCTCTTTCGGGGGTGGG
GGGCACCGCTACCGTAGGTGACATAAGATAGGACACCCCCTGGACCGAGA
TTGAAAGCTTGGTTACTCCGCAACGAATACGATTCTAACCACAAACGCCA
CATTTTCGGACAGCTCTCGACGAGATCTTTCCAACGCCGCCCTTTTCGGG
ACTGACGCTCTGCTTGCTGTGGAGTACTTGAGCTTTGAAAACCGGTCCAG
GGGGTGTCTTTATCTTATGTCACCTACGGTACTCCATGCTTTGGCCTTTG
TCGTGCCGGGGTGGAACCGGGGCGGGGGTACTTGCATTCAGGCGAAAAGC
AGGGGCCCCGCGGGTGCGAAATCAAGGCAGAAGACGGACGCGGCGGCAAG
ATCCGGGTCAGAAGCGGCCGTCGGGGGGGTCTGCGGACGGGAGCCCGGGG
TGGGGCGGGGGGTGATGATGGGCGTGTACGTGCAAGACTTGATGCGACTG
GACGGAGGTGCGTCTATCTATTTATCTATCTATCTGCTACCGTATGTGAC
ACGAGATACCTCACCCCCTGGGCCGACTTTTAGAGCTCCATTGCTCCGTA
ACGAAGGAGGTGCCAGCAAAACCAAACGACACGTTTTCGGACAGCCCTCG
ACTAGATATTTCCAATCCCCTTTCGGCACCGGCAATCTTCTTGCTGGGGA
GGAATCGAGCTTCGAAAATCTATCCAGGGGGTGTGGTATCTTGTGTCACC
TACGGTATCTATCTGCAAAGCTTACGCGCACGGCTGCGGTTTGTCGTCAG
GTCGTGGTGACGACCTGGTAGTTGGCTGCGGCGAAACTTAATTGCAGCGC
AATAGTTTAAGGGGAAGTTAGTGCTGTGAATATGACACCACTTTTTGACT
CGCTTGCTGCCGCATCTTACAAAAATCTCTACGCTGTCCCCGTCTTCTTC
GTAACCCTAACCCTAAATTATTTTCGTGCGCGTCTCTCGCTTCATTTCAC
TCCCCTCTCATACCGGCGTGTGCAGGCTATGGCTGTGTCATTGAGGCACC
TCCAGCGCACCCAGGGCTGATGGGGCTGGTGCTGCCGTGGAACGATGCCC
TCACACACAGGTATTAA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig6754:353..10619-

>mRNA_L-elsbetiae_contig6754.15504.1 ID=mRNA_L-elsbetiae_contig6754.15504.1|Name=mRNA_L-elsbetiae_contig6754.15504.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3216bp|location=Sequence derived from alignment at L-elsbetiae_contig6754:353..10619- (Laminarionema elsbetiae ELsaHSoW15)
CTCCAGGGCCGGGTGTCCCAGACTGCCAGAGCAGCGGCGGCGGCGGCGGC
GGCGGTGGGGTCCTCGTCCTTGTCTCCATCGAAGCTCTTGCCGACAAGCA
GCAGCAATAACAACGCCAATCCGCCGTCCCCCGCGACGCCATCGGCACCC
CTGCCCTTCTCGGTGGTAGCATCCACGGCGCCCCCCACTCCCAAGCTGTT
CCCTCGCCCCTGTACAAGCACCACCACCACCACCACCAGGAGCAACGCAG
CCGGTGCAGCTCTTCCCGCCACCCCTGCTGACAACTGCGGTTCGTGTGGG
GTCGCACCGCAAGCCCTGCCGCGGGAGCTCGAGCTCCAGGGCCGGGTGTC
CCAGACTGCCAGAGCAGCGGCGGCGGCGGCGGCGGCGGTGGGGTCCTCGT
CCTTGTCTCCATCGAAGCTCTTGCCGACAAGCAGCAGCAATAACAACGCC
AATCCGCCGTCCCCCGCGACGCCATCGGCACCCCTGCCCTTCTCGGTGGT
AGCATCCACGGCGCCCCCCACTCCCAAGCTGTTCCCTCGCCCCTGTACAA
GCACCACCACCACCACCACCAGGAGCAACGCAGCCGGTGCAGCTCTTCCC
GCCACCCCTGCTGACAACTGCGGTTCGTGTGGGGTCGCACCGCAAGCCCT
GCCGCGGGAGCTCGAGGTGGACGTCGTGGTGGTAGGAAGCGGAGCTGGCG
GCGGGTGTGCGGCCGGCGCGCTGGCGGCCAGGGGCTTGAGAGTCGCCGTG
CTGGAGAAGGGGGGGCTGTACGGTGCCCAGGACTTCGCGGGGTTTTCCGA
GATGGAGGCGTACAAGAAGATGTACGAGGGGCAGGTGGACGTCGTGGTGG
TAGGAAGCGGAGCTGGCGGCGGGTGTGCGGCCGGCGCGCTGGCGGCCAGG
GGCTTGAGAGTCGCCGTGCTGGAGAAGGGGGGGCTGTACGGTGCCCAGGA
CTTCGCGGGGTTTTCCGAGATGGAGGCGTACAAGAAGATGTACGAGGGGC
AGGGGGTTCTGGCGACGGACGATGGGGGGGTGGCCATTCTCGCGGGCTCC
TGCGTCGGGGGCGGCACGACGGTGAATTGGGCCGCCAGCTTCCGCACGCC
CAGGCATGTTCGGCTGGAGTGGGCCAGAAAGCTCGGCCTGAAGAGCTTCG
AGCTAGGCGGGCCGTACGACGTTGCCCTGGATGCTGTCTGTGAGAGGCTC
GGGGGGGTTCTGGCGACGGACGATGGGGGGGTGGCCATTCTCGCGGGCTC
CTGCGTCGGGGGCGGCACGACGGTGAATTGGGCCGCCAGCTTCCGCACGC
CCAGGCATGTTCGGCTGGAGTGGGCCAGAAAGCTCGGCCTGAAGAGCTTC
GAGCTAGGCGGGCCGTACGACGTTGCCCTGGATGCTGTCTGTGAGAGGCT
CGGGGTCAACACCGACCATTCGCACCGGGCTCAAGGGTGCCCCGTGCCTC
GCGATTCGCTGAGAGTGAACCAGCACCAATCGAGTCTCTGGAACGGCGCA
GCCGCTTCCGGTCGTCTTCCAAGGCCGGTTCCCAGAAATGCGGAAGGGTG
CGTGGACTGCGGCAGCTGCTTGCACGGCTGTGCGTATGGCAGCAAGCGGT
CTACTCATGTCAACACCGACCATTCGCACCGGGCTCAAGGGTGCCCCGTG
CCTCGCGATTCGCTGAGAGTGAACCAGCACCAATCGAGTCTCTGGAACGG
CGCAGCCGCTTCCGGTCGTCTTCCAAGGCCGGTTCCCAGAAATGCGGAAG
GGTGCGTGGACTGCGGCAGCTGCTTGCACGGCTGTGCGTATGGCAGCAAG
CGGTCTACTCATGTTACATGGCTGCAGGACGGACTGGAGTCGGGCAAGAT
CGTCCTCATTCCTAACGCCAAGGTTACATGGCTGCAGGACGGACTGGAGT
CGGGCAAGATCGTCCTCATTCCTAACGCCAAGGTCGACAAGGTCCTAGTG
GACGCTGGCAGAGCCGTTGGAGTCGAGGCAACGGTTACCCCACCCGGAGG
AGTCGGAGAAAGAGAAGGAGGAAAGGTCGACAAGGTCCTAGTGGACGCTG
GCAGAGCCGTTGGAGTCGAGGCAACGGTTACCCCACCCGGAGGAGTCGGA
GAAAGAGAAGGAGGAAAGGCCCTCACGGTTAGAGCGAGGGCGGTGGTCGT
ATCCGGCGGCGCGATCAACACCCCGGCCATCCTCCTGCGCTCCGGGCTGA
AGCACCCCATGATCGGCCGGCACCTCTGCCTCCACCCTGTGCTCCTGGTG
GGAGGCGTGTTCCCGGAGGACTACGGGACGAAAAACGACTCTCACGGTGG
AGATGGAGGAAGAGGCGGAGACGATAGTCGTCGCGTTCGGCGGGAGCGCG
AGGGCCTAGCCGTTGGCGAATCCGGGCGAGCTGAGGCGACCGCTGCTGCC
GGGAAGCAGGCCCTCACGGTTAGAGCGAGGGCGGTGGTCGTATCCGGCGG
CGCGATCAACACCCCGGCCATCCTCCTGCGCTCCGGGCTGAAGCACCCCA
TGATCGGCCGGCACCTCTGCCTCCACCCTGTGCTCCTGGTGGGAGGCGTG
TTCCCGGAGGACTACGGGACGAAAAACGACTCTCACGGTGGAGATGGAGG
AAGAGGCGGAGACGATAGTCGTCGCGTTCGGCGGGAGCGCGAGGGCCTAG
CCGTTGGCGAATCCGGGCGAGCTGAGGCGACCGCTGCTGCCGGGAAGCAG
GCGAAAAGCAGGGGCCCCGCGGGTGCGAAATCAAGGCAGAAGACGGACGC
GGCGGCAAGATCCGGGTCAGAAGCGGCCGTCGGGGGGGTCTGCGGACGGG
AGCCCGGGGTGGGGCGGGGGGTGATGATGGGCGTGTACGTGCAAGACTTG
ATGCGACTGGACGGAGGCGAAAAGCAGGGGCCCCGCGGGTGCGAAATCAA
GGCAGAAGACGGACGCGGCGGCAAGATCCGGGTCAGAAGCGGCCGTCGGG
GGGGTCTGCGGACGGGAGCCCGGGGTGGGGCGGGGGGTGATGATGGGCGT
GTACGTGCAAGACTTGATGCGACTGGACGGAGGCTATGGCTGTGTCATTG
AGGCACCTCCAGCGCACCCAGGGCTGATGGGGCTGGTGCTGCCGTGGAAC
GATGCCCTCACACACAGGTATTAAGCTATGGCTGTGTCATTGAGGCACCT
CCAGCGCACCCAGGGCTGATGGGGCTGGTGCTGCCGTGGAACGATGCCCT
CACACACAGGTATTAA
back to top