mRNA_L-elsbetiae_contig6753.15502.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6753.15502.1
Unique NamemRNA_L-elsbetiae_contig6753.15502.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6753.15502.1 vs. uniprot
Match: A0A6H5K0V5_9PHAE (Carn_acyltransf domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0V5_9PHAE)

HSP 1 Score: 963 bits (2489), Expect = 0.000e+0
Identity = 487/599 (81.30%), Postives = 518/599 (86.48%), Query Frame = 1
Query:    1 MERASPFHETDGDYRTEKFMEGGSSA-PLYSLQGSLPRLPVPTLEETLARYLASIQPVAKQHEYQTSVAATREFLRPGGLGEKLQARLIRRSKDRQDSSWLAEWWNKLGYLHDRGPVVFFVSYFYHFSDSPRAAEDRTQTGRAAALLHAALLFRRHVFTGSLPPEKVGKKGTPLCSTAYKYMFNACRVPGRAEDRVRLYPAAGNHHVLVIRRNRFFVVHVTDADGHPLSPRDIERQLQAVIDQAGGGTPGPGXXXXXXPPSGGPAEARPVGVLTSWGRAEWAAAREQLVADGNEGLLERAEAAALVVCLDEGSPERKADVARALWQVHGDGRNRHFDKSVQIVVFRNGKAGLVGEHSMMDGMPTLRLADFMTKKTMGFSATSTAAGDGSPMAWTPVPVTPPRPLDLALSPASLRAIATAEVAFDQLVDDHEMNVLEFAGYGGNTIKTFKISPDAFVQMALQLGVFKMTGELWATYEPAQVRKFLHGRTACVRSLSSAAKDWVLSMEDGGDRRPTARRLDLLRKAAESHIEYARSAAEGKDADRHLFGLQRVLAAGESCSVFNDPVFARSKHWRMSTSHLTHEMFDGWGWGEVVPDGAGL 1794
            M RASPFHETDGDYRTEKFMEGGSS  PLYSLQ SLPRLP+PTLEET ARYL SI+P+A + EY+ +  A REFLRPGGLGE+LQARL RRS DR DSSWLAEWWNKLGYLHDRGP VFFVSYFYHFSDSPRAA +RTQTGRAAAL+HAALLFRR VFTG LPPEKVGKKG PLCSTAYKYMFNACRVPG AEDRVRLYPA GNHH+LVIRRNRFFVVHVTDA+G PLS RDI+ QLQAV+D A              PPS      RPVGVLTSWGR EW+ AREQLVADGNE LLERAEAAAL VCLD+ +P+ ++DVARALW  HGDGRNRHFDKSVQIVVFRNGKAGLVGEHSMMDGMPTLRLADFM KKTM FSA S+A  D  P +W+PV VTPPRPLD+ALSPASLRAIA+AEVAFD+LV+ HE  +LEF GYG NTIK F+ISPD FVQMALQL VFKMTGE+WATYEPAQVRKFLHGRTACVRSLSSAAKDWVLSMED GDRRPT  RL LLRKAAESH+EYARSAAEGKD DRHLFGLQRVLAA ESCSVF DPVF RSKHWRMSTSHLTHE FDGWGWGEVVPDG G+
Sbjct:    1 MGRASPFHETDGDYRTEKFMEGGSSVLPLYSLQDSLPRLPLPTLEETFARYLVSIEPLADEEEYKATATAAREFLRPGGLGERLQARLARRSIDRHDSSWLAEWWNKLGYLHDRGPTVFFVSYFYHFSDSPRAAVERTQTGRAAALIHAALLFRRAVFTGRLPPEKVGKKGVPLCSTAYKYMFNACRVPGEAEDRVRLYPAGGNHHILVIRRNRFFVVHVTDAEGQPLSHRDIQLQLQAVVDLADPAA------SESAPPS------RPVGVLTSWGRPEWSKAREQLVADGNEELLERAEAAALTVCLDDHAPQTRSDVARALW--HGDGRNRHFDKSVQIVVFRNGKAGLVGEHSMMDGMPTLRLADFMMKKTMRFSADSSAGSDSFPESWSPVAVTPPRPLDIALSPASLRAIASAEVAFDRLVNQHEA-ILEFTGYGANTIKKFRISPDGFVQMALQLAVFKMTGEMWATYEPAQVRKFLHGRTACVRSLSSAAKDWVLSMEDEGDRRPTPHRLGLLRKAAESHMEYARSAAEGKDVDRHLFGLQRVLAADESCSVFTDPVFLRSKHWRMSTSHLTHEQFDGWGWGEVVPDGVGV 584          
BLAST of mRNA_L-elsbetiae_contig6753.15502.1 vs. uniprot
Match: A0A8K1CG49_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CG49_PYTOL)

HSP 1 Score: 511 bits (1315), Expect = 1.010e-171
Identity = 287/600 (47.83%), Postives = 367/600 (61.17%), Query Frame = 1
Query:   19 FHETDGDYRTEKFMEGGSSAPLYSLQGSLPRLPVPTLEETLARYLASIQPVAKQHEYQTSVAATREFLRPGGLGEKLQARLIRRSKDRQDSSWLAEWWNKLGYLHDRGPVVFFVSYFYHFSDSPRAAEDRTQTGRAAALLHAALLFRRHVFTGSLPPEKVGKKGTPLCSTAYKYMFNACRVPGRAEDRVRLYPAAGNHHVLVIRRNRFFVVHVTDA-DGHPLSPRDIERQLQAVIDQAGGGTPGPGXXXXXXPPSGGPAEARPVGVLTSWGRAEWAAAREQLVADGNEGLLERAEAAALVVCLDEGSPERKADVARALWQVHGDGRNRHFDKSVQIVVFRNGKAGLVGEHSMMDGMPTLRLADFMTK----KTMGFS---ATSTAAGDGSPMAWTPVPVTPPRPLDLALSPASLRAIATAEVAFDQLVDDHEMNVLEFAGYGGNTIKTFKISPDAFVQMALQLGVFKMTGELWATYEPAQVRKFLHGRTACVRSLSSAAKDWVLSMEDGGDRRPTARRLDLLRKAAESHIEYARSAAEGKDADRHLFGLQRVLAAGESCSVFNDPVFARSKHWRMSTSHLTHEMFDGWGWGEVVPDGAGL 1794
            F E  GDYR E  +E  S  PLY  Q SLP LPVP+LE T+A YL +I P+    E + +     EFL+ G +G  LQ RL++R+KDR D+S+LAEWWN  GYL  R PVVF VSYF+HF+DS    E R+  GRAA LL A L FR+ V  GSL PE++G K TP+C+TAYKYMFNACR+P R +D  R+Y  A   HV+V+R N+FF V+V DA  G  LS   +  QL+ V+  AG                   ++   VGVL+S  R  WA AR++LV  GNE  L+  E+A ++V LD+ +P  +A++AR LW  HGDGRNR +DK +Q+VV+ NGKAGL+GEHSM+DGMP  R ADFM      K + F    AT+T      P+         P P+    S  +L  I  AE  FDQ V DH+++V  F GYG   IK FK SPDAF QMA+QL   K+ G   ATYE +Q R FLHGRT   RS S A+  +  +M D         +  LL  AA SH++Y + AA+    DRHL GL+ ++  GE    F DPV ARS++W +STSHLT+E FDGWGWGEVVP+G G+
Sbjct:    7 FRECHGDYRAESDLEVASQ-PLYRFQKSLPHLPVPSLESTVALYLETIAPLVTPVELENTKKLAAEFLKQGSIGHTLQQRLVQRAKDRHDTSYLAEWWNTGGYLQVRDPVVFNVSYFFHFADSVHP-EQRSNIGRAAGLLRATLAFRQQVVDGSLEPEQLGPKKTPVCATAYKYMFNACRIPHREQDSYRIYDPARFQHVVVMRHNKFFKVNVVDAATGQWLSFEQLCHQLERVVAMAG-------------------SKESSVGVLSSQDRDAWADARDELVRTGNEAALQVIESAIVIVNLDDETPVTRAEMARGLW--HGDGRNRFYDKCIQLVVYENGKAGLMGEHSMLDGMPMARYADFMLSRLHNKQIAFGPRGATTTELTRSLPL---------PEPISFRFSKQTLSNIVKAEHTFDQTVADHDLHVQSFYGYGSKQIKGFKCSPDAFAQMAIQLAYKKLFGINAATYEASQTRIFLHGRTETTRSCSKASAAFTDAMVDASGAYSVEEKRKLLLDAATSHVQYMKRAAQSCGVDRHLLGLRLLVQEGEKVPFFEDPVMARSRYWLISTSHLTNERFDGWGWGEVVPEGLGI 574          
BLAST of mRNA_L-elsbetiae_contig6753.15502.1 vs. uniprot
Match: A0A6G0XII9_9STRA (Carn_acyltransf domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XII9_9STRA)

HSP 1 Score: 510 bits (1314), Expect = 1.110e-171
Identity = 287/597 (48.07%), Postives = 374/597 (62.65%), Query Frame = 1
Query:   19 FHETDGDYRTEKFMEGGSSAPLYSLQGSLPRLPVPTLEETLARYLASIQPVAKQHEYQTSVAATREFLRPGGLGEKLQARLIRRSKDRQDSSWLAEWWNKLGYLHDRGPVVFFVSYFYHFSDSPRAAEDRTQTGRAAALLHAALLFRRHVFTGSLPPEKVGKKGTPLCSTAYKYMFNACRVPGRAEDRVRLYPAAGNHHVLVIRRNRFFVVHVTDADGHPLSPRDIERQLQAVIDQAGGGTPGPGXXXXXXPPSGGPAEARPVGVLTSWGRAEWAAAREQLVADGNEGLLERAEAAALVVCLDEGSPERKADVARALWQVHGDGRNRHFDKSVQIVVFRNGKAGLVGEHSMMDGMPTLRLADFMTKKTMGFSATSTAAGDGSPMAWTPVPVTPPR-----PLDLALSPASLRAIATAEVAFDQLVDDHEMNVLEFAGYGGNTIKTFKISPDAFVQMALQLGVFKMTGELWATYEPAQVRKFLHGRTACVRSLSSAAKDWVLSMEDGGDRRPTARRLDLLRKAAESHIEYARSAAEGKDADRHLFGLQRVLAAGESCSVFNDPVFARSKHWRMSTSHLTHEMFDGWGWGEVVPDGAGL 1794
            F E  GDYR E+ +E  +  PLY  Q SLP LPVP L +T A YL + +P+    E++ +  A  +FLR G LG  LQ RL  R+  R +SS+L EWWN LGYLH R PVVF VSYF+H SD+    + R+Q GRAA+LL A++ FR  V +G+ PPE +GK  TP+CSTAYKYMFN+CR+P R  D  R+Y  A NHH++V+R N+FF VH       PLS  +    L  ++D AGG                   +   +GVL+S  R  WA AR QL+ADGNE  L   E+A L++CLD+ SP  + +VA+ALW  HG+GRNR +DK VQ++VF NGKAG++ EHSM+DGM     AD++     G    +   GD +     P  V   R     PL   ++  +LRAIA AE  FDQ V DHE++V  F GYG   +KTF+ SPDAFVQMA+QL   K  G+  ATYE +Q R FLHGRT C RS S A+K +  +M          R+  L R+A  SH++Y + AA+ K  DRH  GL+ ++  GES ++F+DPVFARSK+W++STSHLTHE+FDGWGWGEVVPDG G+
Sbjct:    7 FRECWGDYRQEEDLEVPTQ-PLYQHQKSLPTLPVPKLADTCALYLQTARPLTTDAEFKKTQQAVADFLR-GPLGPVLQKRLESRAASRPNSSYLVEWWNTLGYLHVRDPVVFNVSYFFHLSDAFHLPQ-RSQVGRAASLLVASMEFRNQVASGTRPPETLGKNKTPICSTAYKYMFNSCRIPRRDADSYRIYDPAQNHHIVVMRNNKFFKVH---QGPKPLSFLEWTTVLTNILDIAGG-------------------KESSIGVLSSEDRDVWADARTQLLADGNEATLREIESAVLILCLDDESPTSRTEVAQALW--HGNGRNRFYDKCVQLIVFANGKAGILAEHSMLDGMAMSVYADYILT---GLQKQTIDLGDLT----VPHTVLQSRLPAVSPLPFRITAPTLRAIAAAERTFDQTVADHELHVESFFGYGNELMKTFQCSPDAFVQMAIQLAARKHWGKQVATYEASQTRIFLHGRTECTRSCSIASKAFADAMVTTAPIEQLDRKAQLCREACNSHVKYMKVAAQSKGVDRHFMGLRMLMEPGESAAIFDDPVFARSKYWQISTSHLTHELFDGWGWGEVVPDGVGI 569          
BLAST of mRNA_L-elsbetiae_contig6753.15502.1 vs. uniprot
Match: A0A1V9YB81_9STRA (Choline/Carnitine O-acyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YB81_9STRA)

HSP 1 Score: 507 bits (1306), Expect = 2.020e-170
Identity = 281/593 (47.39%), Postives = 378/593 (63.74%), Query Frame = 1
Query:   19 FHETDGDYRTEKFMEGGSSAPLYSLQGSLPRLPVPTLEETLARYLASIQPVAKQHEYQTSVAATREFLRPGGLGEKLQARLIRRSKDRQDSSWLAEWWNKLGYLHDRGPVVFFVSYFYHFSDSPRAAEDRTQTGRAAALLHAALLFRRHVFTGSLPPEKVGKKGTPLCSTAYKYMFNACRVPGRAEDRVRLYPAAGNHHVLVIRRNRFFVVHVTDADGHPLSPRDIERQLQAVIDQAGGGTPGPGXXXXXXPPSGGPAEARPVGVLTSWGRAEWAAAREQLVADGNEGLLERAEAAALVVCLDEGSPERKADVARALWQVHGDGRNRHFDKSVQIVVFRNGKAGLVGEHSMMDGMPTLRLADFMTKKTMGFSATSTAAGDGS-PMAWTPVPVTPPRPLDLALSPASLRAIATAEVAFDQLVDDHEMNVLEFAGYGGNTIKTFKISPDAFVQMALQLGVFKMTGELWATYEPAQVRKFLHGRTACVRSLSSAAKDWVLSMEDGGDRRPTARRLDLLRKAAESHIEYARSAAEGKDADRHLFGLQRVLAAGESCSVFNDPVFARSKHWRMSTSHLTHEMFDGWGWGEVVPDGAGL 1794
            F E  GDYR E+ +E  S+ PLY+ Q SLP LPVPTLE T A YL +++P+A   E+  +  A  +FL  G LG  LQ RL+ R+  R ++S+LAEWWNKLGYL  R PVVF+VSYF+HF+D+  A++ R+Q GRAA+LL A + FR  V TG+ PPE +G+  TPLCSTAYKYMFNACR+P R  D  R+Y  + +HHV+V+R N++F VH       PLS  +    L+ +I  AGG                   +   +GVL+S  R  WA  R+QL+ DGNE  L+  E+A +V+CLD+ +P  + +V+RALW  HG+GRNR +DK++Q++VF NGKAG++ EHSM+DGM     AD++     G    +   GD + P A     +     +   ++ A+L  IA AE  FD  VDDHE++V  F GYG   +K FK SPDA+VQMA+QL   K  G+  ATYE +QVR +LHGRT   RS S A+K +V +M         A +  L R A  SH++Y + AA+ K  DRH  GL+ +L  GES ++F DP+FARSK+W++STSHLTHE+FDGWGWGEVV DG G+
Sbjct:   11 FRECWGDYRDEEDLEV-STQPLYAHQKSLPTLPVPTLEATCALYLQTVRPLATDAEFAATKKAVADFL-AGPLGPALQKRLLERATARPNTSYLAEWWNKLGYLEVRDPVVFYVSYFFHFADAAHASQ-RSQVGRAASLLVATMDFRNQVATGTRPPEMLGRGKTPLCSTAYKYMFNACRIPHRKADSYRIYDPSTHHHVVVLRNNKYFKVH---QPATPLSFLEWSTVLEKIIAIAGG-------------------KESSIGVLSSQDRDVWADGRDQLLVDGNEASLKDIESAVVVLCLDDETPVSRTEVSRALW--HGNGRNRFYDKTIQLIVFENGKAGILAEHSMLDGMAMSVYADYILT---GLRNQTINLGDLTVPHATLAARLPAVTQVPFNITRATLHNIALAEHTFDLTVDDHEVHVESFFGYGNALMKNFKCSPDAYVQMAIQLAARKFWGKEVATYEASQVRPYLHGRTETTRSCSIASKAFVDTMVSAAPLERLADKASLCRAACNSHVQYMKLAAQSKGVDRHFLGLRLLLQPGESAAIFEDPLFARSKYWQISTSHLTHELFDGWGWGEVVSDGVGI 573          
BLAST of mRNA_L-elsbetiae_contig6753.15502.1 vs. uniprot
Match: A0A2D4C7A0_PYTIN (Carn_acyltransf domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C7A0_PYTIN)

HSP 1 Score: 507 bits (1305), Expect = 3.150e-170
Identity = 286/595 (48.07%), Postives = 367/595 (61.68%), Query Frame = 1
Query:   13 SPFHETDGDYRTEKFMEGGSSAPLYSLQGSLPRLPVPTLEETLARYLASIQPVAKQHEYQTSVAATREFLRPGGLGEKLQARLIRRSKDRQDSSWLAEWWNKLGYLHDRGPVVFFVSYFYHFSDSPRAAEDRTQTGRAAALLHAALLFRRHVFTGSLPPEKVGKKGTPLCSTAYKYMFNACRVPGRAEDRVRLYPAAGNHHVLVIRRNRFFVVHVTD-ADGHPLSPRDIERQLQAVIDQAGGGTPGPGXXXXXXPPSGGPAEARPVGVLTSWGRAEWAAAREQLVADGNEGLLERAEAAALVVCLDEGSPERKADVARALWQVHGDGRNRHFDKSVQIVVFRNGKAGLVGEHSMMDGMPTLRLADFMTKKTMGFSATSTAAGDGSPMAWTPVPVTPPRPLDLALSPASLRAIATAEVAFDQLVDDHEMNVLEFAGYGGNTIKTFKISPDAFVQMALQLGVFKMTGELWATYEPAQVRKFLHGRTACVRSLSSAAKDWVLSMEDGGDRRPTARRLDLLRKAAESHIEYARSAAEGKDADRHLFGLQRVLAAGESCSVFNDPVFARSKHWRMSTSHLTHEMFDGWGWGEVVPDGAGL 1794
            S F E  GDYR+E+ +E  +  PLY  Q  LPRLPVP+LEET+A YL S+ P+A  HE   +    + FL   G G +LQ RL+ R+ +R+D+S+LAEWWN  GYL  R PVVF VSYF+HF+DS  A E R+Q GRAAALL AA+LFR  V  GSL PE++G K TP+C+TAYKYMFNACR+P R +D  R+Y  A  HHV+      FF V + + A G  LS  +   QLQ V+D AG                    +  PVGVL+S  R  WA AR++LV  GNE  L   E+A L +CLD+ +P  + +VAR LW  HGDGRNR FDK +Q+VV+ NGKAGL+GEHSM+DGMP  R AD +       +      G  S    T +P+  P PL    S A+L  IA AE  FD    DH+++V  F G+G   IKTFK SPDAFVQ+A+QL   K+ G   ATYE +Q R FL GRT   RS +  +  +  +M D       A R  LL  A  +H++Y + AA+G+  DRHL  L+ ++  GE    F DPV ARS++W +STSHLT+E+FDGWGWGEVVP+G G+
Sbjct:   10 SGFRECHGDYRSERDLEVATQ-PLYRFQQQLPRLPVPSLEETVALYLESVAPLATPHELAQTQRLAQAFLAADGQGAELQRRLLARAAERRDTSFLAEWWNTGGYLQVRDPVVFNVSYFFHFADSVHA-EQRSQVGRAAALLRAAMLFRARVADGSLEPEQLGPKKTPVCATAYKYMFNACRIPRREQDSYRIYDPARFHHVV------FFKVPLVERATGRXLSFEEXCLQLQRVLDMAG-------------------XKESPVGVLSSEDRDAWADARDELVRTGNEAALREIESAVLALCLDDTAPVSRTEVARGLW--HGDGRNRFFDKCIQLVVYENGKAGLLGEHSMLDGMPMARFADELVTGLHRSTVELGPRGRSSEALRTALPL--PXPLTFRFSRATLANIARAERTFDATAADHDVHVEAFFGFGKRAIKTFKCSPDAFVQVAIQLAYKKLFGRDAATYEASQTRVFLDGRTETTRSCTRQSAAFTDAMLDASGATSPAERRQLLLAAVGAHVQYMKRAAQGRGVDRHLLALRLLVQPGERVPFFEDPVMARSRYWLVSTSHLTNELFDGWGWGEVVPEGLGI 573          
BLAST of mRNA_L-elsbetiae_contig6753.15502.1 vs. uniprot
Match: W4G3A7_9STRA (Carn_acyltransf domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G3A7_9STRA)

HSP 1 Score: 503 bits (1294), Expect = 1.260e-168
Identity = 291/596 (48.83%), Postives = 380/596 (63.76%), Query Frame = 1
Query:   19 FHETDGDYRTEKFMEGGSSAPLYSLQGSLPRLPVPTLEETLARYLASIQPVAKQHEYQTSVAATREFLRPGGLGEKLQARLIRRSKDRQDSSWLAEWWNKLGYLHDRGPVVFFVSYFYHFSDSPRAAEDRTQTGRAAALLHAALLFRRHVFTGSLPPEKVGKKGTPLCSTAYKYMFNACRVPGRAEDRVRLYPAAGNHHVLVIRRNRFFVVHVTDADGHPLSPRDIERQLQAVIDQAGGGTPGPGXXXXXXPPSGGPAEARPVGVLTSWGRAEWAAAREQLVADGNEGLLERAEAAALVVCLDEGSPERKADVARALWQVHGDGRNRHFDKSVQIVVFRNGKAGLVGEHSMMDGMPTLRLADFMT----KKTMGFSATSTAAGDGSPMAWTPVPVTPPRPLDLALSPASLRAIATAEVAFDQLVDDHEMNVLEFAGYGGNTIKTFKISPDAFVQMALQLGVFKMTGELWATYEPAQVRKFLHGRTACVRSLSSAAKDWVLSMEDGGDRRPTARRLDLLRKAAESHIEYARSAAEGKDADRHLFGLQRVLAAGESCSVFNDPVFARSKHWRMSTSHLTHEMFDGWGWGEVVPDGAGL 1794
            F E  GDYR E+ +E  S   LY  Q SLP+LPVP+L +T A YL +++P+    E+  + AA   FL+ G LG  LQ RL  R+  R +SS+LAEWWN LGYLH R PVVF VSYF+HFSDS   A+ R+Q GRAA+LL A++ FR  V +G+ PPE +GK  TPLCSTAYKYMFNACR+P R  D  R+Y  + +HHV+V+R N+FF VH       PLS  +    L  ++D AG                   +    VGVL+S  R  WA AR QL+ADGN   L   E+A L++CLD+ +P  + DV+RALW  HG+GRNR +DK +Q+VVF NGKAGL+ EHSM+DGM     ADF+     K+T+    T+      + +A  P  VTP   L + +S A+L+AIA+AE  FD  V  H+++V  F GYG + IK+F+ SPDAFVQMA+QL   K  G+  ATYE +QVR FLHGRT   RS SSA+  +   M         + +  L R A  +H++Y + AA+ K  DRHL GL+  L  GES ++F+DPVFARSK+W++STSHLTH++FDGWGWGEVVPDG G+
Sbjct:    8 FRECWGDYREEEDLEVASQQ-LYKHQKSLPKLPVPSLADTCALYLQTVRPLTTDAEFVATKAAVEAFLK-GPLGPVLQKRLEARAASRPNSSYLAEWWNTLGYLHVRDPVVFNVSYFFHFSDSVHLAQ-RSQVGRAASLLVASMAFRNQVASGTRPPETLGKGQTPLCSTAYKYMFNACRIPRRDADSYRIYDPSTHHHVVVMRHNKFFKVHQGPT---PLSFLEWTSILTHILDVAG-------------------SIESSVGVLSSENRDVWADARTQLLADGNAATLRDIESAVLLLCLDDDAPTSRTDVSRALW--HGNGRNRFYDKCIQLVVFGNGKAGLLAEHSMLDGMAMSVYADFILTGLHKQTIDLGDTTLT--HAALVARLPA-VTP---LKVHMSAATLQAIASAERTFDATVAGHDVHVESFFGYGNHAIKSFQCSPDAFVQMAIQLAGRKHWGKSVATYEASQVRVFLHGRTETTRSCSSASHAFANIMVQTSPVDQLSVKAGLCRDACNAHVKYMKIAAQSKGVDRHLLGLRLCLQPGESAALFDDPVFARSKYWQISTSHLTHDLFDGWGWGEVVPDGVGI 570          
BLAST of mRNA_L-elsbetiae_contig6753.15502.1 vs. uniprot
Match: A0A485LUQ7_9STRA (Aste57867_25540 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LUQ7_9STRA)

HSP 1 Score: 502 bits (1292), Expect = 2.440e-168
Identity = 284/597 (47.57%), Postives = 371/597 (62.14%), Query Frame = 1
Query:   19 FHETDGDYRTEKFMEGGSSAPLYSLQGSLPRLPVPTLEETLARYLASIQPVAKQHEYQTSVAATREFLRPGGLGEKLQARLIRRSKDRQDSSWLAEWWNKLGYLHDRGPVVFFVSYFYHFSDSPRAAEDRTQTGRAAALLHAALLFRRHVFTGSLPPEKVGKKGTPLCSTAYKYMFNACRVPGRAEDRVRLYPAAGNHHVLVIRRNRFFVVHVTDADGHPLSPRDIERQLQAVIDQAGGGTPGPGXXXXXXPPSGGPAEARPVGVLTSWGRAEWAAAREQLVADGNEGLLERAEAAALVVCLDEGSPERKADVARALWQVHGDGRNRHFDKSVQIVVFRNGKAGLVGEHSMMDGMPTLRLADFMTKKTMGFSATSTAAGDGSPMAWTPVPVTPPR-----PLDLALSPASLRAIATAEVAFDQLVDDHEMNVLEFAGYGGNTIKTFKISPDAFVQMALQLGVFKMTGELWATYEPAQVRKFLHGRTACVRSLSSAAKDWVLSMEDGGDRRPTARRLDLLRKAAESHIEYARSAAEGKDADRHLFGLQRVLAAGESCSVFNDPVFARSKHWRMSTSHLTHEMFDGWGWGEVVPDGAGL 1794
            F E  GDYR E+ +E  + A LY  Q SLP LPVP+L +T A YL +++P+    E++ +  A  +FL+ G LG  LQ RL  R+  R +SS+LAEWWN LGYLH R PVVF VSYF+HFSD+   A+ R+Q GRAA+L  A++ FR  V  G+ PPE +GK  TP+CSTAYKYMFNACR+P R  D  R+Y  A +HHV+V+R N+FF V   D    PLS  +    L  +++ AG                   ++  PVGVL+S  R  WA A  QL+ADGN   L   E+A  ++CLD+ +P  + +VA+ALW  HG+GRNR +DK +Q++VF NGKAG++ EHSM+DGM     AD++     G        GD S      VP T  R     PL   ++  +LRAIA AE  FD  V DHE++V  F GYG   IKTF+ SPDAFVQ+A+QL   K  G+  ATYE +Q R +LHGRT   RS SSA+K +  +M           +  L R A  +H++Y + AA+ K  DRH  GL+  L  GES ++F+DPVFARSK+W+MSTSHLTHE+FDGWGWGEVVPDG G+
Sbjct:   11 FRECWGDYREEEDLEVPTQA-LYQHQKSLPTLPVPSLADTCALYLQTVRPLTTDTEFRATQKAVADFLQ-GPLGPALQKRLEARAASRPNSSYLAEWWNTLGYLHVRDPVVFNVSYFFHFSDAFHLAQ-RSQVGRAASLAVASMEFRTQVAAGTRPPETLGKNKTPICSTAYKYMFNACRIPRRDADSYRIYDPAAHHHVVVVRHNKFFKV---DQGASPLSFLEWTTVLTHIVETAG-------------------SKESPVGVLSSQDRDVWADAHAQLLADGNADTLREIESAVFLLCLDDDAPTSRTEVAQALW--HGNGRNRFYDKCMQLIVFENGKAGILAEHSMLDGMAMSVYADYILT---GLKNQMIDLGDMS------VPHTALRQPRVTPLQFRMTKPTLRAIAAAERTFDATVADHELHVESFFGYGNALIKTFQCSPDAFVQLAIQLAGRKHWGKYVATYEASQTRLYLHGRTETTRSCSSASKAFADAMVHTAPTDQLQAKAALARDACNAHVKYMKLAAQSKGVDRHFLGLRLCLEKGESAAIFDDPVFARSKYWQMSTSHLTHELFDGWGWGEVVPDGVGI 571          
BLAST of mRNA_L-elsbetiae_contig6753.15502.1 vs. uniprot
Match: G4Z5G4_PHYSP (Carn_acyltransf domain-containing protein n=16 Tax=Phytophthora TaxID=4783 RepID=G4Z5G4_PHYSP)

HSP 1 Score: 501 bits (1289), Expect = 8.960e-168
Identity = 284/601 (47.25%), Postives = 370/601 (61.56%), Query Frame = 1
Query:   19 FHETDGDYRTEKFMEGGSSAPLYSLQGSLPRLPVPTLEETLARYLASIQPVAKQHEYQTSVAATREFLRPGGLGEKLQARLIRRSKDRQDSSWLAEWWNKLGYLHDRGPVVFFVSYFYHFSDSPRAAEDRTQTGRAAALLHAALLFRRHVFTGSLPPEKVGKKGTPLCSTAYKYMFNACRVPGRAEDRVRLYPAAGNHHVLVIRRNRFFVVHVTDA-DGHPLSPRDIERQLQAVIDQAGGGTPGPGXXXXXXPPSGGPAEARPVGVLTSWGRAEWAAAREQLVADG--NEGLLERAEAAALVVCLDEGSPERKADVARALWQVHGDGRNRHFDKSVQIVVFRNGKAGLVGEHSMMDGMPTLRLADFMTKKT------MGFSATSTAAGDGSPMAWTPVPVTPPRPLDLALSPASLRAIATAEVAFDQLVDDHEMNVLEFAGYGGNTIKTFKISPDAFVQMALQLGVFKMTGELWATYEPAQVRKFLHGRTACVRSLSSAAKDWVLSMEDGGDRRPTARRLDLLRKAAESHIEYARSAAEGKDADRHLFGLQRVLAAGESCSVFNDPVFARSKHWRMSTSHLTHEMFDGWGWGEVVPDGAGL 1794
            F E  GDYR E  +E  ++ PLY  Q  LPRLPVP+L ET++ YL +++P+A   E   S      FLRPGG+GE+LQ RL+ R+K+R DSS+LAEWWN LGYL  R PVVF VSYF+HF+DS   A+ R+  GRAAALL  +LLF R V  GS+ PE++GKK TP+CSTAYKYMFNACR+P R +D  R+Y    + H +V+R N+FF + + D     PL    +  QL  ++D AG                   A+   VG LTS  R  WA ARE+L+     NE  L   E++ LV+ +D+ +P  + +VAR LW  HG+GRNR FDK VQIVVF NGKAGL+GEHSM+DGMP  R AD++  +       +G    +TA  + S +A        P+ L    +  +LR IA AE  FDQ V DHE+ V  F GYG   IK F+ SPDAFVQ+A+QL   K+  +  ATYE +Q R FLHGRT   RS S+A+  +  +MED         +  LL  AA +H+ Y R A  G+  DRH+ GL+ ++  GE    F DPV AR+  W +STSHLT+E+FDGWGWGEVVP+G G+
Sbjct:   14 FRECWGDYRAEADLED-AARPLYRFQCDLPRLPVPSLAETVSLYLETLKPLATPAELAHSKELAAAFLRPGGMGEELQRRLLARAKERGDSSFLAEWWNTLGYLQVRDPVVFNVSYFFHFADSVHPAQ-RSNVGRAAALLRGSLLFARQVADGSIEPEQLGKKKTPICSTAYKYMFNACRIPRRDQDSYRIYDPKTHTHAVVMRHNKFFKLELLDPRTQEPLGFEALCFQLARILDAAG-------------------AKESAVGALTSQDRDSWADAREELIRASPLNEESLRAIESSLLVLNMDDEAPVSRTEVARGLW--HGNGRNRFFDKCVQIVVFENGKAGLLGEHSMLDGMPMARYADYLLSRLHHGQVDLGPRGQTTAQLERSLVA--------PKQLTFRFTAQTLRNIAEAEKVFDQTVIDHEVFVQAFYGYGARAIKGFRCSPDAFVQLAIQLAYKKLFKKNVATYEASQTRVFLHGRTETTRSCSAASARFTDAMEDASGAVTAEEKKKLLLAAANAHVAYMRKAGAGRGVDRHILGLKLLVQPGERVPFFEDPVMARASRWLISTSHLTNELFDGWGWGEVVPEGLGI 583          
BLAST of mRNA_L-elsbetiae_contig6753.15502.1 vs. uniprot
Match: A0A5D6XN23_9STRA (Carn_acyltransf domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XN23_9STRA)

HSP 1 Score: 500 bits (1287), Expect = 1.790e-167
Identity = 283/601 (47.09%), Postives = 368/601 (61.23%), Query Frame = 1
Query:   19 FHETDGDYRTEKFMEGGSSAPLYSLQGSLPRLPVPTLEETLARYLASIQPVAKQHEYQTSVAATREFLRPGGLGEKLQARLIRRSKDRQDSSWLAEWWNKLGYLHDRGPVVFFVSYFYHFSDSPRAAEDRTQTGRAAALLHAALLFRRHVFTGSLPPEKVGKKGTPLCSTAYKYMFNACRVPGRAEDRVRLYPAAGNHHVLVIRRNRFFVVHVTD-ADGHPLSPRDIERQLQAVIDQAGGGTPGPGXXXXXXPPSGGPAEARPVGVLTSWGRAEWAAAREQLVADGNEGLLERAEAAALVVCLDEGSPERKADVARALWQVHGDGRNRHFDKSVQIVVFRNGKAGLVGEHSMMDGMPTLRLADFMTKKT------MGFSATSTAAGDGSPMAWTPVPVTPPRPLDLALSPASLRAIATAEVAFDQLVDDHEMNVLEFAGYGGNTIKTFKISPDAFVQMALQLGVFKMTGELWATYEPAQVRKFLHGRTACVRSLSSAAKDWVLSMED--GGDRRPTARRLDLLRKAAESHIEYARSAAEGKDADRHLFGLQRVLAAGESCSVFNDPVFARSKHWRMSTSHLTHEMFDGWGWGEVVPDGAGL 1794
            F E  GDYR E  +E     PLY  Q SLPRLPVP LE+T+A YL +++P+++      S     EFL PGGLG +LQ RL +R+ +RQDSS+LAEWWN  GYL  R PVVF VSYF+HF+DS  A E R+  GRAAALL   + FR  + +G L PE++G K TP+C+TAYKYMFNACRVP R  D  R++  A ++H +V+R N+FF + + D A   PLS   +  QLQ V+D AG                   A+   +G L+S  R  WA ARE+L+  GNE  L   E+A ++V LD+ +P  + +VA ALW  HGDGRNR +DK +Q+ VF NGKAGL+GEHSM+DGMP  R ADF+  +       +G  A +TA  D  P          P  +    S A+L AIA AE  FD  V  H+++V  F GYG   IK F  SPDAF Q+A+QL   K+ G    TYE +Q R FLHGRT   RS S  + D+  +M D  G D    A+R +LL  AA  H++Y + AA+G   DRHL GL+ ++  GE+   F DP    S++WR+STSHLT+E+FDGWGWGEVVP+G G+
Sbjct:   12 FRECLGDYRDESDLEPAEQ-PLYRFQRSLPRLPVPPLEDTVALYLETLRPLSEPAALARSRQLAAEFLAPGGLGRELQRRLEQRAAERQDSSYLAEWWNTGGYLQVRDPVVFNVSYFFHFADSVHA-EQRSNVGRAAALLRGTMAFRAQLMSGVLEPEQLGPKKTPVCATAYKYMFNACRVPRRESDTYRIFDPATHNHAVVMRHNKFFRLELLDPATRAPLSFVQLCHQLQRVLDAAG-------------------AKESAIGALSSADRDAWADAREELLRCGNEAALRAIESAVVIVNLDDAAPVSRTEVAAALW--HGDGRNRFYDKCIQLAVFENGKAGLLGEHSMLDGMPMARYADFLVGRLQRGQLDLGARAFTTAQLDALPA---------PAQVTFRFSGATLAAIAAAERVFDATVAAHDLHVQAFYGYGARAIKGFGCSPDAFAQVAIQLAYRKLFGISVPTYEASQTRLFLHGRTETTRSCSQQSADFTAAMVDASGADVGAAAKR-ELLLAAANRHVQYMKRAAQGLGVDRHLLGLRMLVRPGETVPFFEDPAMTSSRYWRISTSHLTNELFDGWGWGEVVPEGLGI 579          
BLAST of mRNA_L-elsbetiae_contig6753.15502.1 vs. uniprot
Match: K3X9J9_GLOUD (Carn_acyltransf domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X9J9_GLOUD)

HSP 1 Score: 499 bits (1285), Expect = 3.700e-167
Identity = 280/605 (46.28%), Postives = 373/605 (61.65%), Query Frame = 1
Query:   10 ASPFHETDGDYRTEKFMEGGSSAPLYSLQGSLPRLPVPTLEETLARYLASIQPVAKQHEYQTSVAATREFLRPGGLGEKLQARLIRRSKDRQDSSWLAEWWNKLGYLHDRGPVVFFVSYFYHFSDSPRAAEDRTQTGRAAALLHAALLFRRHVFTGSLPPEKVG--KKGTPLCSTAYKYMFNACRVPGRAEDRVRLYPAAGNHHVLVIRRNRFFVVHVTDADG-HPLSPRDIERQLQAVIDQAGGGTPGPGXXXXXXPPSGGPAEARPVGVLTSWGRAEWAAAREQLVADGNEGLLERAEAAALVVCLDEGSPERKADVARALWQVHGDGRNRHFDKSVQIVVFRNGKAGLVGEHSMMDGMPTLRLADFMTKK------TMGFSATSTAAGDGSPMAWTPVPVTPPRPLDLALSPASLRAIATAEVAFDQLVDDHEMNVLEFAGYGGNTIKTFKISPDAFVQMALQLGVFKMTGELWATYEPAQVRKFLHGRTACVRSLSSAAKDWVLSMEDG-GDRRPTARRLDLLRKAAESHIEYARSAAEGKDADRHLFGLQRVLAAGESCSVFNDPVFARSKHWRMSTSHLTHEMFDGWGWGEVVPDGAGL 1794
            A+ F E  GDYR E  +E  S  PLY  Q SLPRLPVP LEET+A YL +I+P+    E+ TS    +EFLR GGLG +L  RL++R+ DR+D+S+LAEWWN  GYL  R PVVF VSYF+HF+DS  A E R+  GRAAALL   + FRR +  G+L PE++G   K TP+CSTAYKYMFNACR+P R  D  R+Y  A ++HV+V+R N+FF   + DA    PLS   I  QL  ++D AG                   ++   VGVL++  R  WA AR++L+ +GNE  L+  E+A ++V +D+ +P  + +VA A+W  HGDGRNR +DK +Q  VF NGKAGL+GEHSM+DGMP  R AD++  +       +G    +TA  + +        +  P  +    S A+L AI  AE  FD  V DH++ V  F GYG   IKTFK SPDAF Q+A+QL   K+ G   ATYE +Q R FLHGRT   RS S  + D+  +M +  G  +    +  LL+ A   H++Y + AA+G   DRHL GL+ +L  GE    F DP   +S++W +STSHLT+E+FDGWGWGEVVP+G G+
Sbjct:   10 AAGFRECVGDYRNESDLEVASQ-PLYRFQASLPRLPVPKLEETVALYLETIRPLTTAQEFATSKQLAQEFLRLGGLGRELHQRLVQRAADRKDTSYLAEWWNTWGYLQVRDPVVFNVSYFFHFADSVHA-EQRSNVGRAAALLRGTMEFRRQLVDGTLEPEQLGGGAKKTPICSTAYKYMFNACRIPHRESDTYRIYDPATHNHVVVMRNNKFFSFELLDATTKEPLSFVQICHQLNRILDAAG-------------------SKESSVGVLSAENRDTWADARDELLRNGNEDALKVIESAVVIVNMDDYAPVSRTEVAHAMW--HGDGRNRFYDKCIQFAVFENGKAGLLGEHSMLDGMPMARYADYLVGRLQKGQINLGKRDFTTAELNRT--------LANPTQIKFRFSRATLDAIVAAEKMFDATVADHDLFVQSFYGYGSKAIKTFKCSPDAFAQVAIQLAYKKLFGINVATYEASQTRIFLHGRTETTRSCSQKSADFTDAMVNASGVPKSNEEKKKLLQDATNYHVQYMKRAAQGLGVDRHLLGLRMLLKPGEKVPFFEDPPMTKSRYWLISTSHLTNELFDGWGWGEVVPEGLGI 583          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6753.15502.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K0V5_9PHAE0.000e+081.30Carn_acyltransf domain-containing protein n=2 Tax=... [more]
A0A8K1CG49_PYTOL1.010e-17147.83Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6G0XII9_9STRA1.110e-17148.07Carn_acyltransf domain-containing protein n=1 Tax=... [more]
A0A1V9YB81_9STRA2.020e-17047.39Choline/Carnitine O-acyltransferase n=1 Tax=Achlya... [more]
A0A2D4C7A0_PYTIN3.150e-17048.07Carn_acyltransf domain-containing protein n=1 Tax=... [more]
W4G3A7_9STRA1.260e-16848.83Carn_acyltransf domain-containing protein n=4 Tax=... [more]
A0A485LUQ7_9STRA2.440e-16847.57Aste57867_25540 protein n=1 Tax=Aphanomyces stella... [more]
G4Z5G4_PHYSP8.960e-16847.25Carn_acyltransf domain-containing protein n=16 Tax... [more]
A0A5D6XN23_9STRA1.790e-16747.09Carn_acyltransf domain-containing protein n=1 Tax=... [more]
K3X9J9_GLOUD3.700e-16746.28Carn_acyltransf domain-containing protein n=1 Tax=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6753contigL-elsbetiae_contig6753:356..5572 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score984.9
Seed ortholog evalue1.6e-284
Seed eggNOG ortholog2880.D8LEZ7
Preferred nameCAT2
KEGG rclassRC00004,RC00037
KEGG koko:K00624
KEGG ReactionR02396
KEGG Pathwayko04146,map04146
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004092,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005777,GO:0006575,GO:0006577,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0009437,GO:0009987,GO:0016406,GO:0016407,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0034641,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097164,GO:1901564
EggNOG free text desc.choline O-acetyltransferase activity
EggNOG OGsKOG3717@1,KOG3717@2759
EC2.3.1.7
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Ec32 ortholog descriptionCarnitine/choline O-acyltransferase
Ec32 orthologEc-21_006150.1
Exons9
Model size1794
Cds size1794
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816747.9779446-CDS-L-elsbetiae_contig6753:355..4891622816747.9779446-CDS-L-elsbetiae_contig6753:355..489Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6753 356..489 -
1691683783.4849486-CDS-L-elsbetiae_contig6753:355..4891691683783.4849486-CDS-L-elsbetiae_contig6753:355..489Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6753 356..489 -
1622816747.9937644-CDS-L-elsbetiae_contig6753:1156..12081622816747.9937644-CDS-L-elsbetiae_contig6753:1156..1208Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6753 1157..1208 -
1691683783.5013137-CDS-L-elsbetiae_contig6753:1156..12081691683783.5013137-CDS-L-elsbetiae_contig6753:1156..1208Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6753 1157..1208 -
1622816748.0033116-CDS-L-elsbetiae_contig6753:1468..16741622816748.0033116-CDS-L-elsbetiae_contig6753:1468..1674Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6753 1469..1674 -
1691683783.5162826-CDS-L-elsbetiae_contig6753:1468..16741691683783.5162826-CDS-L-elsbetiae_contig6753:1468..1674Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6753 1469..1674 -
1622816748.0135102-CDS-L-elsbetiae_contig6753:2084..21961622816748.0135102-CDS-L-elsbetiae_contig6753:2084..2196Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6753 2085..2196 -
1691683783.5259042-CDS-L-elsbetiae_contig6753:2084..21961691683783.5259042-CDS-L-elsbetiae_contig6753:2084..2196Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6753 2085..2196 -
1622816748.026622-CDS-L-elsbetiae_contig6753:2589..27931622816748.026622-CDS-L-elsbetiae_contig6753:2589..2793Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6753 2590..2793 -
1691683783.5354004-CDS-L-elsbetiae_contig6753:2589..27931691683783.5354004-CDS-L-elsbetiae_contig6753:2589..2793Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6753 2590..2793 -
1622816748.0415573-CDS-L-elsbetiae_contig6753:3107..32161622816748.0415573-CDS-L-elsbetiae_contig6753:3107..3216Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6753 3108..3216 -
1691683783.5471463-CDS-L-elsbetiae_contig6753:3107..32161691683783.5471463-CDS-L-elsbetiae_contig6753:3107..3216Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6753 3108..3216 -
1622816748.0540338-CDS-L-elsbetiae_contig6753:3618..40531622816748.0540338-CDS-L-elsbetiae_contig6753:3618..4053Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6753 3619..4053 -
1691683783.5641682-CDS-L-elsbetiae_contig6753:3618..40531691683783.5641682-CDS-L-elsbetiae_contig6753:3618..4053Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6753 3619..4053 -
1622816748.0694094-CDS-L-elsbetiae_contig6753:4370..46751622816748.0694094-CDS-L-elsbetiae_contig6753:4370..4675Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6753 4371..4675 -
1691683783.5747547-CDS-L-elsbetiae_contig6753:4370..46751691683783.5747547-CDS-L-elsbetiae_contig6753:4370..4675Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6753 4371..4675 -
1622816748.0808399-CDS-L-elsbetiae_contig6753:5335..55721622816748.0808399-CDS-L-elsbetiae_contig6753:5335..5572Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6753 5336..5572 -
1691683783.5853903-CDS-L-elsbetiae_contig6753:5335..55721691683783.5853903-CDS-L-elsbetiae_contig6753:5335..5572Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6753 5336..5572 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6753.15502.1prot_L-elsbetiae_contig6753.15502.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6753 356..5572 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6753.15502.1

>prot_L-elsbetiae_contig6753.15502.1 ID=prot_L-elsbetiae_contig6753.15502.1|Name=mRNA_L-elsbetiae_contig6753.15502.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=598bp
MERASPFHETDGDYRTEKFMEGGSSAPLYSLQGSLPRLPVPTLEETLARY
LASIQPVAKQHEYQTSVAATREFLRPGGLGEKLQARLIRRSKDRQDSSWL
AEWWNKLGYLHDRGPVVFFVSYFYHFSDSPRAAEDRTQTGRAAALLHAAL
LFRRHVFTGSLPPEKVGKKGTPLCSTAYKYMFNACRVPGRAEDRVRLYPA
AGNHHVLVIRRNRFFVVHVTDADGHPLSPRDIERQLQAVIDQAGGGTPGP
GSGSGSGPPSGGPAEARPVGVLTSWGRAEWAAAREQLVADGNEGLLERAE
AAALVVCLDEGSPERKADVARALWQVHGDGRNRHFDKSVQIVVFRNGKAG
LVGEHSMMDGMPTLRLADFMTKKTMGFSATSTAAGDGSPMAWTPVPVTPP
RPLDLALSPASLRAIATAEVAFDQLVDDHEMNVLEFAGYGGNTIKTFKIS
PDAFVQMALQLGVFKMTGELWATYEPAQVRKFLHGRTACVRSLSSAAKDW
VLSMEDGGDRRPTARRLDLLRKAAESHIEYARSAAEGKDADRHLFGLQRV
LAAGESCSVFNDPVFARSKHWRMSTSHLTHEMFDGWGWGEVVPDGAGL
back to top

mRNA from alignment at L-elsbetiae_contig6753:356..5572-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6753.15502.1 ID=mRNA_L-elsbetiae_contig6753.15502.1|Name=mRNA_L-elsbetiae_contig6753.15502.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5217bp|location=Sequence derived from alignment at L-elsbetiae_contig6753:356..5572- (Laminarionema elsbetiae ELsaHSoW15)
ATGGAACGCGCTAGCCCCTTCCACGAGACTGATGGCGACTACCGAACAGA AAAGTTCATGGAGGGTGGATCCTCAGCGCCTCTGTACAGTCTTCAGGGTT CTTTGCCGAGGCTGCCAGTGCCGACTCTAGAGGAGACTTTAGCGCGGTAC CTCGCGTCGATTCAGCCGGTGGCCAAACAACACGAGTACCAGACATCTGT TGCAGCCACGCGAGAGTTTCTACGGCCTGGAGGACTGGTGAGATAGCTTG CGAGTACTGCTGATATGTAGCTCGCAGCTGCACCATAGCAGGAAGATAAA CCTCGCTTGCCGCGCAACATCTGTGGTTGTGCCGATATCAGCGCGGAACT GCTGTTGGTATCTTTAGCTAGAGTACAGCAGCAGCAGTCACCAATCTTCA ATATTTGACAGAAAATTCCGACGAAGTTGGCATCTGTGTCTTCTCTTCTC TTCTCTTCTCTTCTCTCTCCCTCTCTCCCTCCCTCCCTCTCTCTCTCTCT CTCTCTCTCTCTCTCTCTCTCTGTTGCCATTTCTCGCTCAATTTGATGAG GCCGGTGTCGCTCCTCATTGTACCAAGGGTAGGTGTGTCGACGATCTAAC TACAGCAGTATCAGAGGGTAGGCAGCTGCGATTACGAACCTATCCGGGAA GCGCCCGTTTGTACACAGCAATGATACCACTCAACGGCACGCTTTTGGAG TCACAACAGCCATCCGTCATTTCATAGCCCGTACCACCGTAACACACCCA AGCTACCTCAGAAGCGAACTACCCGTGGCGCCTGGCCACCCCCCGGTAGA AGGCACACACGTGCAACCACTGAACTTGGTATAATCTAACCATTTCCAAG GCCCTTGACAAAACGGTCCACGAACCCCCCCCTCTCTAACCGCGCAGGGA GAGAAGCTGCAGGCCCGCCTCATCCGACGCTCGAAAGACCGCCAGGACTC CAGCTGGCTGGCGGAATGGTGGAACAAGCTCGGGTACTTGCATGACCGGG GACCGGTGGTGTTTTTCGTGTCGTACTTCTACCACTTCTCGGACAGCCCC AGGGCGGCGGAGGACCGGACCCAGACCGGCCGGGCCGCCGCGCTGCTCCA CGCCGCGCTGCTGTTCCGTCGGCATGTCTTCACCGGCAGCCTGCCGCCCG AGAAAGTCGGCAAGAAGGGAACCCCCCTGTGCTCCACGGCGTACAAGTAC ATGTGAGGGGACAGTAGAGCAACGCGTGCTTTTTTGTTTGTATGTATGTC GTTGGTCGCACCCGCCCGCACCCCGACACTGTCCATACATTGGTGCATGC CTGGGCACTCTTCGCACACCGGCAGCAAATCGCCCCCCTTCCGGTGCCAC CACAGCGCCCCACTTCCCACAGCAGCACAACCACTTCCTCGCTTCTCTCG GCGAACTACACACAACGCCCTCCCAAATGTTTGCGAACCTCTCACCGAAC CCCCCCCCCCCTCGGTCGCACCCTCCTCCCCCCCTCCCTCCCTCCCCGAC AAAACCGACGCTCCGATAGGTTCAACGCGTGCAGGGTGCCGGGCCGCGCG GAGGACCGCGTCCGCCTCTACCCGGCCGCGGGGAACCACCACGTCCTCGT CATCCGCCGCAACCGCTTCTTTGTGGTCCACGTCACCGACGCCGACGGAC ACCCCCTCTCCCCCCGGGACATCGAGCGCCAGCTGCAGGCCGTCATCGAC CAGGCCGGTGGCGGGACCCCCGGGCCTGGATCTGGGTCTGGGTCTGGACC TCCCTCCGGGGGCCCGGCAGAAGCCCGGCCCGTGGGGGTCCTGACCTCCT GGGGTCGGGCCGAGTGGGCCGCCGCCCGAGAGCAGCTCGTGGCGGACGGC AACGAAGGGCTGTTGGAGAGGGCGGAGGCCGCCGCGCTAGTAGTGTGCCT GGACGAGGGGTCTCCCGAGAGAAAGGCCGACGTGGCGCGCGCGCTGTGGC AAGTGTTTTAGTTTTTTTGTTATTTTACGGTATGTAGTGGGTCACCGTAC GATAGCATTGAGTAGCCGTATTTCGCAGTAGTGCCGCTTGTTTCGATAGT CAGTGGGGTACAAAAGTAAAGAGCTGTATTTTGGCGGGTCGCGTATCAAG AAGAGAGACGGAGACACGCCTGCAGAACCCTGAGAGAGAGCACTCTTTCC GGGCGGTACTTTTGCTTGTCCGTGTACAATACGATAATGTTATCGTTCTG AAAGTTGAGCATTCTTCCTGCATATGCATGTAAAGACCAATAATTACAAG GCTTATTTATTGCTTTCCGCCGAACCCGATGGCGCGCGACTTCGTTGCTT CTTCAAAATCATTTTGACGTGGGAACGCGTGCGTATTCTGTAAACATTTG GTGTAGGCACGGGGACGGGCGCAACCGGCACTTCGACAAGTCGGTGCAGA TCGTGGTGTTCCGGAACGGGAAGGCCGGCCTGGTGGGCGAGCACTCAATG ATGGACGGAATGCCGGTGAGGGTAGTTGCTGAAATATCCTCTGCTGAAAT GTCCTTCAGATGTCCTCAAAAGGGGGAGGTGTGTAGCGTAGTTTTGCCCG ACAGCACAAATTGTCTTCTCTAGGGAGGCGAGGTTGGGCGGGCTTGAATA GGTCACAACAGCGTTCCTTTTACCGGTGCAAATGGCTGGAGCACGGCAAA AATGTTATCCTCTTCGCCATGTACCGCACGCACATCAGGTACAGATAGAA CCCCCACCGGCGCACACACAAGTCACGCATCGCTAAGCTTTTGACACCGT GTGCGACGCCTCTATTTTTTTCGTCCCAGACCCTCCGCCTTGCCGACTTC ATGACGAAGAAAACCATGGGGTTCTCCGCCACGTCCACGGCCGCTGGTGA TGGCTCTCCGATGGCGTGGACCCCTGTGCCGGTCACCCCGCCCCGACCCC TCGACCTGGCCTTGTCACCTGCTTCCCTTCGGGCGATCGCGACAGCCGAA GTTGCGTTCGATCAGCTGGTGGACGATCACGAGGTACGTGTTTGGGCATG AGAGACTTAAGAGAGAACGAGAGACAGGCAGACAGACAGAGACAGACAGA GACAGAGAGAGATAGCCGCCGCAAACAGCGGCAGTGGTCGATTCTGGTCG TGGTGGCGGTGGCGGTGCTGTCGTGGTCATCGTCGTCGTTGATGCTTGTG TTGTCTTGTCCCCGTTCGTGTCTATGCTGCTTGTGGTGATGATGCCATCG CTCTCTCAACTGGTTTATTTCGGCATGGTTAAAAAAGGCGTTCAAGATAT TCGGACGATGGTTGATGGGGTACGGCGATACCGGGATAAACGACAGAGCG CATTTAAAATCCACCAAGCCGCGAACTCTCCCTCCCCCCCCTCTCTTTCT TCCGAACTTGACGCTGTTTGTATTAGATGAACGTCCTCGAGTTTGCGGGC TACGGTGGGAACACCATCAAGACTTTCAAGATAAGCCCCGACGCCTTCGT GCAGATGGCGCTCCAGCTAGGGGTCTTCAAGATGACAGGTGCCATGCAGT CCAAGCAAACCAGGGAAGAATCGATTGATTGCCCCACGACAAGGAAAACC AGGCTCAGAAAAGCACTGTTTATGGATCTTGCGCGCGGGTGCAGGCGGCA GATACCATGCACACCAACCACCCGTGCTTCGTCTTCCCCTATCATATTTC ATACAATAGCGCGTAAAAGTCCCTGTGATAGTTTCTATACACCTGTCAGC CCGAAGACATACGTACTACATAAATTATCATCGAATCGAAAACACAGGCA AATCCGCCGCAATGCCCGCTGCTGACATGCCCCACGCTCTCTCCTCGCTC CACCGCAGCCTCCTCCCAAACGCCTCTCACCCCGATGCACATCTCTGCTC CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCGAAAACGGGAAAAGGC GAGCTCTGGGCAACTTACGAACCCGCGCAGGTAAGAAAGTTCCTCCACGG AAGGACGGCCTGCGTCCGCTCCCTGTCGAGCGCCGCCAAGGACTGGGTGC TCTCCATGGAGGACGGTGGGGACCGCAGGCCGACCGCCCGACGCCTGGAC CTCCTGCGGAAGGCGGCCGAGTCGCACATCGAGTACGCTCGGAGCGCGGC TGAGGTGGGGCGATCGATCAGACGCTTGAAACCTTTTGTCCGGCGCGCAC GCCATTCGATTTGCTCAAAAGTATGTATACATATACGCTCCGCGAATTGC CCCAGATGCGCCCGTTTTTTGCCGTAGCCGTGGGTCTGTCTAGCACCAGT CGGGATGACCATGGAATGCTTGTTTCTCAGCGGGCAACCTGGAGTTTCAG TACAATACGGCCCGCTGTGTTTCTTCGTTGCATTTCGCCGTCCCTGTCTG GCCCACCCCCTCAGGGCAAGGACGCGGACAGGCACTTGTTCGGACTCCAA CGAGTGTTGGCGGCAGGTGGGTTCGGGAGGAGATCTGTAACATGTCATTG TGCGATCGGTCGCTTCGCCGTCGTGTGCGTCTTGATGCACACCGGGAGTC ACAATTGTTTGTGACCACGGGCCCCCATGGGTGCTTTTGGACTAAAGAGC TATGTAATGTGAAAAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC GACAACAACAGTATTAGCACACGAAAGGGAGGCGTTAAACCAATGTAAGG GTGGAGGTTCTGTTACGTCAGCGCGATGTGTCCCTTCGGTCGTTGTTGTT TTCAGGGTTTGTCTTCTCGGGCGCAAATTCCGTGGTGTATCATACCGGTG TTGAAATGTGCAAGTCTGGTTGTCTTGGATATAATCTCCGGTCGTGCCGC GGTGTGCGGTAGGGTAAATGGACGCCCACCTATTTGTTTATCGTCGTTGG CGAATTGAAACGCTTGGTGCTAGCTCTACGGCTTGACCATGACCAGCGGC AGAACTCAAGCCGTCCAAGATATCGTTCGTTGTTGCGAATAAGACGCAGT TTGTGTGTCCGCAACAGATTGCCGTGCCCGCTGCAGTATAAAGTATGCCT TTGTTTCAAAACTGGACGGCTATCGTCTACTTTGATTTGATTGCTCCCCC CTCCCCCTCGCCTCCACCCGCCTGCGCTCCAAGGCGAGTCGTGCTCGGTG TTCAACGACCCGGTATTCGCGCGGTCCAAGCACTGGAGGATGAGCACGAG CCACTTGACGCACGAAATGTTCGATGGCTGGGGCTGGGGCGAAGTCGTGC CTGACGGTGCGGGACTG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig6753:356..5572-

>mRNA_L-elsbetiae_contig6753.15502.1 ID=mRNA_L-elsbetiae_contig6753.15502.1|Name=mRNA_L-elsbetiae_contig6753.15502.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3588bp|location=Sequence derived from alignment at L-elsbetiae_contig6753:356..5572- (Laminarionema elsbetiae ELsaHSoW15)
ATGGAACGCGCTAGCCCCTTCCACGAGACTGATGGCGACTACCGAACAGA
AAAGTTCATGGAGGGTGGATCCTCAGCGCCTCTGTACAGTCTTCAGGGTT
CTTTGCCGAGGCTGCCAGTGCCGACTCTAGAGGAGACTTTAGCGCGGTAC
CTCGCGTCGATTCAGCCGGTGGCCAAACAACACGAGTACCAGACATCTGT
TGCAGCCACGCGAGAGTTTCTACGGCCTGGAGGACTGATGGAACGCGCTA
GCCCCTTCCACGAGACTGATGGCGACTACCGAACAGAAAAGTTCATGGAG
GGTGGATCCTCAGCGCCTCTGTACAGTCTTCAGGGTTCTTTGCCGAGGCT
GCCAGTGCCGACTCTAGAGGAGACTTTAGCGCGGTACCTCGCGTCGATTC
AGCCGGTGGCCAAACAACACGAGTACCAGACATCTGTTGCAGCCACGCGA
GAGTTTCTACGGCCTGGAGGACTGGGAGAGAAGCTGCAGGCCCGCCTCAT
CCGACGCTCGAAAGACCGCCAGGACTCCAGCTGGCTGGCGGAATGGTGGA
ACAAGCTCGGGTACTTGCATGACCGGGGACCGGTGGTGTTTTTCGTGTCG
TACTTCTACCACTTCTCGGACAGCCCCAGGGCGGCGGAGGACCGGACCCA
GACCGGCCGGGCCGCCGCGCTGCTCCACGCCGCGCTGCTGTTCCGTCGGC
ATGTCTTCACCGGCAGCCTGCCGCCCGAGAAAGTCGGCAAGAAGGGAACC
CCCCTGTGCTCCACGGCGTACAAGTACATGGAGAGAAGCTGCAGGCCCGC
CTCATCCGACGCTCGAAAGACCGCCAGGACTCCAGCTGGCTGGCGGAATG
GTGGAACAAGCTCGGGTACTTGCATGACCGGGGACCGGTGGTGTTTTTCG
TGTCGTACTTCTACCACTTCTCGGACAGCCCCAGGGCGGCGGAGGACCGG
ACCCAGACCGGCCGGGCCGCCGCGCTGCTCCACGCCGCGCTGCTGTTCCG
TCGGCATGTCTTCACCGGCAGCCTGCCGCCCGAGAAAGTCGGCAAGAAGG
GAACCCCCCTGTGCTCCACGGCGTACAAGTACATGTTCAACGCGTGCAGG
GTGCCGGGCCGCGCGGAGGACCGCGTCCGCCTCTACCCGGCCGCGGGGAA
CCACCACGTCCTCGTCATCCGCCGCAACCGCTTCTTTGTGGTCCACGTCA
CCGACGCCGACGGACACCCCCTCTCCCCCCGGGACATCGAGCGCCAGCTG
CAGGCCGTCATCGACCAGGCCGGTGGCGGGACCCCCGGGCCTGGATCTGG
GTCTGGGTCTGGACCTCCCTCCGGGGGCCCGGCAGAAGCCCGGCCCGTGG
GGGTCCTGACCTCCTGGGGTCGGGCCGAGTGGGCCGCCGCCCGAGAGCAG
CTCGTGGCGGACGGCAACGAAGGGCTGTTGGAGAGGGCGGAGGCCGCCGC
GCTAGTAGTGTGCCTGGACGAGGGGTCTCCCGAGAGAAAGGCCGACGTGG
CGCGCGCGCTGTGGCAAGTGTTCAACGCGTGCAGGGTGCCGGGCCGCGCG
GAGGACCGCGTCCGCCTCTACCCGGCCGCGGGGAACCACCACGTCCTCGT
CATCCGCCGCAACCGCTTCTTTGTGGTCCACGTCACCGACGCCGACGGAC
ACCCCCTCTCCCCCCGGGACATCGAGCGCCAGCTGCAGGCCGTCATCGAC
CAGGCCGGTGGCGGGACCCCCGGGCCTGGATCTGGGTCTGGGTCTGGACC
TCCCTCCGGGGGCCCGGCAGAAGCCCGGCCCGTGGGGGTCCTGACCTCCT
GGGGTCGGGCCGAGTGGGCCGCCGCCCGAGAGCAGCTCGTGGCGGACGGC
AACGAAGGGCTGTTGGAGAGGGCGGAGGCCGCCGCGCTAGTAGTGTGCCT
GGACGAGGGGTCTCCCGAGAGAAAGGCCGACGTGGCGCGCGCGCTGTGGC
AAGTGCACGGGGACGGGCGCAACCGGCACTTCGACAAGTCGGTGCAGATC
GTGGTGTTCCGGAACGGGAAGGCCGGCCTGGTGGGCGAGCACTCAATGAT
GGACGGAATGCCGGCACGGGGACGGGCGCAACCGGCACTTCGACAAGTCG
GTGCAGATCGTGGTGTTCCGGAACGGGAAGGCCGGCCTGGTGGGCGAGCA
CTCAATGATGGACGGAATGCCGACCCTCCGCCTTGCCGACTTCATGACGA
AGAAAACCATGGGGTTCTCCGCCACGTCCACGGCCGCTGGTGATGGCTCT
CCGATGGCGTGGACCCCTGTGCCGGTCACCCCGCCCCGACCCCTCGACCT
GGCCTTGTCACCTGCTTCCCTTCGGGCGATCGCGACAGCCGAAGTTGCGT
TCGATCAGCTGGTGGACGATCACGAGACCCTCCGCCTTGCCGACTTCATG
ACGAAGAAAACCATGGGGTTCTCCGCCACGTCCACGGCCGCTGGTGATGG
CTCTCCGATGGCGTGGACCCCTGTGCCGGTCACCCCGCCCCGACCCCTCG
ACCTGGCCTTGTCACCTGCTTCCCTTCGGGCGATCGCGACAGCCGAAGTT
GCGTTCGATCAGCTGGTGGACGATCACGAGATGAACGTCCTCGAGTTTGC
GGGCTACGGTGGGAACACCATCAAGACTTTCAAGATAAGCCCCGACGCCT
TCGTGCAGATGGCGCTCCAGCTAGGGGTCTTCAAGATGACAGATGAACGT
CCTCGAGTTTGCGGGCTACGGTGGGAACACCATCAAGACTTTCAAGATAA
GCCCCGACGCCTTCGTGCAGATGGCGCTCCAGCTAGGGGTCTTCAAGATG
ACAGGCGAGCTCTGGGCAACTTACGAACCCGCGCAGGTAAGAAAGTTCCT
CCACGGAAGGACGGCCTGCGTCCGCTCCCTGTCGAGCGCCGCCAAGGACT
GGGTGCTCTCCATGGAGGACGGTGGGGACCGCAGGCCGACCGCCCGACGC
CTGGACCTCCTGCGGAAGGCGGCCGAGTCGCACATCGAGTACGCTCGGAG
CGCGGCTGAGGCGAGCTCTGGGCAACTTACGAACCCGCGCAGGTAAGAAA
GTTCCTCCACGGAAGGACGGCCTGCGTCCGCTCCCTGTCGAGCGCCGCCA
AGGACTGGGTGCTCTCCATGGAGGACGGTGGGGACCGCAGGCCGACCGCC
CGACGCCTGGACCTCCTGCGGAAGGCGGCCGAGTCGCACATCGAGTACGC
TCGGAGCGCGGCTGAGGGCAAGGACGCGGACAGGCACTTGTTCGGACTCC
AACGAGTGTTGGCGGCAGGGCAAGGACGCGGACAGGCACTTGTTCGGACT
CCAACGAGTGTTGGCGGCAGGCGAGTCGTGCTCGGTGTTCAACGACCCGG
TATTCGCGCGGTCCAAGCACTGGAGGATGAGCACGAGCCACTTGACGCAC
GAAATGTTCGATGGCTGGGGCTGGGGCGAAGTCGTGCCTGACGGTGCGGG
ACTGGCGAGTCGTGCTCGGTGTTCAACGACCCGGTATTCGCGCGGTCCAA
GCACTGGAGGATGAGCACGAGCCACTTGACGCACGAAATGTTCGATGGCT
GGGGCTGGGGCGAAGTCGTGCCTGACGGTGCGGGACTG
back to top