mRNA_L-elsbetiae_contig674.15484.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig674.15484.1 vs. uniprot
Match: A0A6H5JSZ0_9PHAE (Cytochrome c domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JSZ0_9PHAE) HSP 1 Score: 191 bits (485), Expect = 1.300e-55 Identity = 94/103 (91.26%), Postives = 98/103 (95.15%), Query Frame = 3 Query: 36 MSTKAGAKIFKTKCSQCHTVEKGAGNKQGPNLNGLFGRMAGTLEGYSYSTANKTSGVTWEESSLFDYLLAPKKYIKGTKMVFAGIKKPAERKELIAYLKEATA 344 MSTK GAKIFKTKCSQCHTVEK AG+KQGPNLNGLFGR AGT++GYSYSTANKTSGV W ES+LFDYLLAPKKYIKGTKMVFAGIKKPAERKELIAYLKEATA Sbjct: 1 MSTKLGAKIFKTKCSQCHTVEKDAGHKQGPNLNGLFGRAAGTVDGYSYSTANKTSGVVWTESTLFDYLLAPKKYIKGTKMVFAGIKKPAERKELIAYLKEATA 103
BLAST of mRNA_L-elsbetiae_contig674.15484.1 vs. uniprot
Match: A0A7S2SEC8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SEC8_9STRA) HSP 1 Score: 171 bits (432), Expect = 1.040e-47 Identity = 82/104 (78.85%), Postives = 90/104 (86.54%), Query Frame = 3 Query: 33 TMSTKAGAKIFKTKCSQCHTVEKGAGNKQGPNLNGLFGRMAGTLEGYSYSTANKTSGVTWEESSLFDYLLAPKKYIKGTKMVFAGIKKPAERKELIAYLKEATA 344 TMST GAKIFKTKCSQCHTVE G +KQGPNLNGLFGR +G GY+YS ANK SG+ W + +LFDYLLAPKKYIKGTKMVFAGIKKPAERK+LIAYLKE+TA Sbjct: 11 TMSTAKGAKIFKTKCSQCHTVEAGGAHKQGPNLNGLFGRQSGLAAGYTYSDANKNSGIIWGDDTLFDYLLAPKKYIKGTKMVFAGIKKPAERKDLIAYLKESTA 114
BLAST of mRNA_L-elsbetiae_contig674.15484.1 vs. uniprot
Match: A0A835YXF9_9STRA (Cytochrome c n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXF9_9STRA) HSP 1 Score: 166 bits (420), Expect = 4.260e-46 Identity = 80/103 (77.67%), Postives = 91/103 (88.35%), Query Frame = 3 Query: 36 MSTKAGAKIFKTKCSQCHTVEKGAGNKQGPNLNGLFGRMAGTLEGYSYSTANKTSGVTWEESSLFDYLLAPKKYIKGTKMVFAGIKKPAERKELIAYLKEATA 344 MS + GAKIFKTKCSQCH VEKGAG++QGPNL+GLFGR AGT EGYSYSTANK+SGV W + +LF+YLL PKKYIKGTKMVFAGIKK ER++LIAYLK AT+ Sbjct: 1 MSAEKGAKIFKTKCSQCHVVEKGAGHRQGPNLHGLFGRTAGTTEGYSYSTANKSSGVVWGDDTLFEYLLNPKKYIKGTKMVFAGIKKADERQDLIAYLKSATS 103
BLAST of mRNA_L-elsbetiae_contig674.15484.1 vs. uniprot
Match: A0A7S2G6U3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G6U3_9STRA) HSP 1 Score: 166 bits (419), Expect = 5.780e-46 Identity = 80/103 (77.67%), Postives = 87/103 (84.47%), Query Frame = 3 Query: 36 MSTKAGAKIFKTKCSQCHTVEKGAGNKQGPNLNGLFGRMAGTLEGYSYSTANKTSGVTWEESSLFDYLLAPKKYIKGTKMVFAGIKKPAERKELIAYLKEATA 344 MS GAKIFKTKCSQCHTVE G +KQGPNLNG+FGR +G GY +S ANK SGVTW E +LFDYLLAPKKYIKGTKMVFAG+KKPAERK+LIAYLK ATA Sbjct: 1 MSETKGAKIFKTKCSQCHTVEAGGAHKQGPNLNGIFGRQSGQATGYDFSKANKDSGVTWGEDTLFDYLLAPKKYIKGTKMVFAGLKKPAERKDLIAYLKSATA 103
BLAST of mRNA_L-elsbetiae_contig674.15484.1 vs. uniprot
Match: A0A444GG99_ENSVE (Cytochrome c domain-containing protein n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A444GG99_ENSVE) HSP 1 Score: 162 bits (411), Expect = 1.150e-44 Identity = 76/100 (76.00%), Postives = 87/100 (87.00%), Query Frame = 3 Query: 48 AGAKIFKTKCSQCHTVEKGAGNKQGPNLNGLFGRMAGTLEGYSYSTANKTSGVTWEESSLFDYLLAPKKYIKGTKMVFAGIKKPAERKELIAYLKEATAS 347 AG KIFKTKC+QCHTVEKGAG+KQGPNLNGLFGR +GT GYSYSTANK V W+ES+L+DYLL PKKYI GTKMVF G+KKP ER +LIAYLK++T+S Sbjct: 14 AGGKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTAPGYSYSTANKNMAVVWQESTLYDYLLNPKKYIPGTKMVFPGLKKPKERADLIAYLKQSTSS 113
BLAST of mRNA_L-elsbetiae_contig674.15484.1 vs. uniprot
Match: A0A6V7QVU6_ANACO (Cytochrome c domain-containing protein n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A6V7QVU6_ANACO) HSP 1 Score: 162 bits (411), Expect = 1.300e-44 Identity = 78/109 (71.56%), Postives = 88/109 (80.73%), Query Frame = 3 Query: 15 ELPVQHTMSTKAGAKIFKTKCSQCHTVEKGAGNKQGPNLNGLFGRMAGTLEGYSYSTANKTSGVTWEESSLFDYLLAPKKYIKGTKMVFAGIKKPAERKELIAYLKEAT 341 E P +K G KIFKTKC+QCHTVEKGAG+KQGPNLNGLFGR +GT GYSYSTANK V WEE++L++YLL PKKYI GTKMVF G+KKP ER +LIAYLKEAT Sbjct: 7 EAPCLPPRESKGGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSTANKNMAVIWEENTLYEYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKEAT 115
BLAST of mRNA_L-elsbetiae_contig674.15484.1 vs. uniprot
Match: A0A022R107_ERYGU (Cytochrome c domain-containing protein n=17 Tax=Mesangiospermae TaxID=1437183 RepID=A0A022R107_ERYGU) HSP 1 Score: 162 bits (410), Expect = 1.550e-44 Identity = 77/100 (77.00%), Postives = 87/100 (87.00%), Query Frame = 3 Query: 45 KAGAKIFKTKCSQCHTVEKGAGNKQGPNLNGLFGRMAGTLEGYSYSTANKTSGVTWEESSLFDYLLAPKKYIKGTKMVFAGIKKPAERKELIAYLKEATA 344 KAG KIFKTKC+QCHTV+KGAG+KQGPNLNGLFGR +GT GYSYSTANK+ V W E++L+DYLL PKKYI GTKMVF G+KKP ER +LIAYLKEATA Sbjct: 13 KAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSTANKSMAVNWGENTLYDYLLNPKKYIPGTKMVFPGLKKPKERADLIAYLKEATA 112
BLAST of mRNA_L-elsbetiae_contig674.15484.1 vs. uniprot
Match: A0A4D9D2B8_9STRA (Cytochrome c domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2B8_9STRA) HSP 1 Score: 162 bits (409), Expect = 1.640e-44 Identity = 77/103 (74.76%), Postives = 87/103 (84.47%), Query Frame = 3 Query: 36 MSTKAGAKIFKTKCSQCHTVEKGAGNKQGPNLNGLFGRMAGTLEGYSYSTANKTSGVTWEESSLFDYLLAPKKYIKGTKMVFAGIKKPAERKELIAYLKEATA 344 MS + GAKIFKTKCSQCHTVEKG +KQGPNLNGLFGR +G E YSYSTANK SG+ W E +LF+YLLAPK YIKGTKMVFAGIK +RK+LIAYLK++TA Sbjct: 1 MSAEKGAKIFKTKCSQCHTVEKGGAHKQGPNLNGLFGRQSGQAENYSYSTANKNSGIIWGEDTLFEYLLAPKNYIKGTKMVFAGIKSAKDRKDLIAYLKDSTA 103
BLAST of mRNA_L-elsbetiae_contig674.15484.1 vs. uniprot
Match: CYC_ORYSI (Cytochrome c n=62 Tax=Mesangiospermae TaxID=1437183 RepID=CYC_ORYSI) HSP 1 Score: 162 bits (409), Expect = 2.170e-44 Identity = 76/100 (76.00%), Postives = 87/100 (87.00%), Query Frame = 3 Query: 45 KAGAKIFKTKCSQCHTVEKGAGNKQGPNLNGLFGRMAGTLEGYSYSTANKTSGVTWEESSLFDYLLAPKKYIKGTKMVFAGIKKPAERKELIAYLKEATA 344 KAG KIFKTKC+QCHTV+KGAG+KQGPNLNGLFGR +GT GYSYSTANK V WEE++L+DYLL PKKYI GTKMVF G+KKP ER +LI+YLKEAT+ Sbjct: 13 KAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSTANKNMAVIWEENTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLISYLKEATS 112
BLAST of mRNA_L-elsbetiae_contig674.15484.1 vs. uniprot
Match: A0A7I8KG52_SPIIN (Hypothetical protein n=6 Tax=Magnoliopsida TaxID=3398 RepID=A0A7I8KG52_SPIIN) HSP 1 Score: 162 bits (409), Expect = 2.170e-44 Identity = 76/99 (76.77%), Postives = 86/99 (86.87%), Query Frame = 3 Query: 48 AGAKIFKTKCSQCHTVEKGAGNKQGPNLNGLFGRMAGTLEGYSYSTANKTSGVTWEESSLFDYLLAPKKYIKGTKMVFAGIKKPAERKELIAYLKEATA 344 AG KIFKTKC+QCHTV+KGAG+KQGPNLNGLFGR +GT GYSYSTANK V WEES+L+DYLL PKKYI GTKMVF G+KKP ER +LIAYLK+AT+ Sbjct: 14 AGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTSGYSYSTANKNMAVIWEESTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKQATS 112 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig674.15484.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig674.15484.1 >prot_L-elsbetiae_contig674.15484.1 ID=prot_L-elsbetiae_contig674.15484.1|Name=mRNA_L-elsbetiae_contig674.15484.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=105bp MSTKAGAKIFKTKCSQCHTVEKGAGNKQGPNLNGLFGRMAGTLEGYSYSTback to top mRNA from alignment at L-elsbetiae_contig674:18614..20830+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig674.15484.1 ID=mRNA_L-elsbetiae_contig674.15484.1|Name=mRNA_L-elsbetiae_contig674.15484.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2217bp|location=Sequence derived from alignment at L-elsbetiae_contig674:18614..20830+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig674:18614..20830+ >mRNA_L-elsbetiae_contig674.15484.1 ID=mRNA_L-elsbetiae_contig674.15484.1|Name=mRNA_L-elsbetiae_contig674.15484.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=630bp|location=Sequence derived from alignment at L-elsbetiae_contig674:18614..20830+ (Laminarionema elsbetiae ELsaHSoW15)back to top |