mRNA_L-elsbetiae_contig6724.15468.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6724.15468.1 vs. uniprot
Match: D7G2L9_ECTSI (Peptidase S16 lon domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2L9_ECTSI) HSP 1 Score: 857 bits (2214), Expect = 7.880e-294 Identity = 520/764 (68.06%), Postives = 559/764 (73.17%), Query Frame = 1 Query: 67 MLRRLTRFSRPNAARWTRS--------HGVRSLRVNAAVNAHRDGKTAVDDCLERVLGPGAEPASAFAVVFFEGHDQAGVQDALNSFAERRPQAPPVIGCCLGESAYEQQKRRLKRQQSARRLALASAPPSGKPGHKLLPLSPPPSP----SVEELPPQDSSDSSFRSPTIVTVLGLGFEDSEDFKGEE--GDGGRRGRVEALPVYADGGCFPNLLGKDSVPRIFGLPEDKQPLFFMLSKDDQSVPASDLQDTNRRLGNLLPNCTRLCALSSGDPSSVVSSFPAGDAPVRGVCLVGDMSLQEQAGLARKTLGAFGFNAITVSGDVCDELFVPSFPPPHAYAAXXXXXXXXXXXXXPQXXXXXXXSPQGEEDSLERVWERLRMLSHKERQXXXXXXXXXXXXXXXXQLGVFKVDEVVFPGMTRRFRIFEPRYRALVKQCLAEDRPLVILPLSRGGNTVATAARVTGLHSVEEDGRCEVEITGIARCKVETMWMKGESFGLFEAVIELFGDEQDKEED----SQGTEAKHPR-------GTVDGRGAAVDG-EGREEAEKAGGANAEGEGLVADLPELERLRIEVSTIMQKELYRTRTRGRSPLWPGWDGSVSQNDAYAAFTVA-PPLPGPLTAVETDGDXXXXXXXXXXXXNGSSXTTIXXXXXXXXXAGEVDSGGRTSVDGASSIGGVDPCDLDAEALSYWAAQNVEAGALMKHEWLSSTSTAGRLRGVRDLCRFALARHRDRSGVDSAVLSRPLSALRDLTSR 2277 MLRRLT P A W RS + VR LRV AAVNA +TAVDDCLERVLGP P+SAFAVVFFEGHD AGVQ ALNSFAERRPQAPPVIGC LGES YEQQKRRLK+QQSARRLALAS+ PSGKPGHKL P S P S S + P Q+SS+S FRSP IVTVLGLGF GEE G GG RGRVEALPVYA+GGCFPN+LGKDSV RIF LP++KQPLFFMLSKDDQSVPASDLQDTN+RLGNLLPN TRLCALSSG+PSSVVSSFPAGDAP+ GVCL GD+ LQEQAGLARKTLGAFGFNAI+ SG VCDELFVPS P+ + D+LERV E++R L + R XXXXXXXXXXX QLGVFKVDEVVFPGMT+RFRIFEPRYRALVKQCLAED PL ILPLSRGGNTVAT ARV+GLH+VE DGRCEVEITGIARC V+TMWMKGESFGLFEAV+ELFGDEQ K E+ + T ++ PR G G+ A G EG E GEGL+A+LPELERLRIEVS IMQKELYRTRTRGRSPLWPGWDGSVS DA AA TVA PPLP P T D +G XXXXXXX V SSIGG+DPCDL+AEALSYWAA NVEAGALMKHEWLSSTST+ RLRGVRDLCRFALARHRDRS VD VLSRPLSALRDLTSR Sbjct: 1 MLRRLT----PTVASWRRSGRTHDLQANPVRGLRVVAAVNATTQTETAVDDCLERVLGPDTAPSSAFAVVFFEGHDHAGVQGALNSFAERRPQAPPVIGCGLGESPYEQQKRRLKQQQSARRLALASSSPSGKPGHKLTPWSSPASSATALSSSDEPSQESSES-FRSPKIVTVLGLGFH------GEELAGGGGGRGRVEALPVYAEGGCFPNILGKDSVVRIFELPKEKQPLFFMLSKDDQSVPASDLQDTNQRLGNLLPNSTRLCALSSGNPSSVVSSFPAGDAPMVGVCLTGDIPLQEQAGLARKTLGAFGFNAISASGAVCDELFVPS---------------------QPRAAWLDPRPSSIKMDTLERVQEQVRALEQQSRXXXXXXXXXXXX-----QLGVFKVDEVVFPGMTKRFRIFEPRYRALVKQCLAEDEPLAILPLSRGGNTVATTARVSGLHNVEADGRCEVEITGIARCSVKTMWMKGESFGLFEAVVELFGDEQAKAEEEAEVNTRTASERPRDATPDAAGDTSGQKEATGGNEGXRXXEGXXXXXXXGEGLMAELPELERLRIEVSAIMQKELYRTRTRGRSPLWPGWDGSVSHGDAQAALTVASPPLPTPPTIKTADDSFEAAASSG----SGDCSINAVGXXXXXXXXXXXXXXXXXGVGDKSSIGGLDPCDLNAEALSYWAAHNVEAGALMKHEWLSSTSTSARLRGVRDLCRFALARHRDRSAVDGGVLSRPLSALRDLTSR 723
BLAST of mRNA_L-elsbetiae_contig6724.15468.1 vs. uniprot
Match: A0A6H5JQN4_9PHAE (Lon N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN4_9PHAE) HSP 1 Score: 442 bits (1138), Expect = 1.580e-139 Identity = 271/402 (67.41%), Postives = 294/402 (73.13%), Query Frame = 1 Query: 1135 DSLERVWERLRMLSHKERQXXXXXXXXXXXXXXXXQLGVFKVDEVVFPGMTRRFRIFEPRYRALVKQCLAEDRPLVILPLSRGGNTVATAARVTGLHSVEEDGRCEVEITGIARCKVETMWMKGESFGLFEAVIELFGDEQDKEED----SQGTEAKHPR-GTVDGRGAAVDGEGREEA----------EKAGGANAEGEGLVADLPELERLRIEVSTIMQKELYRTRTRGRSPLWPGWDGSVSQNDAYAAFTV-APPLPGPLTAVETDGDXXXXXXXXXXXXNGSSXTTIXXXXXXXXXAGEVDS-----GGRTSVDGASSIGGVDPCDLDAEALSYWAAQNVEAGALMKHEWLSSTSTAGRLRGVRDLCRFALARHRDRSGVDSAVLSRPLSALRDLTSR 2277 D+LERV E++R L + RQXXXXXXXXXXXXX QLGVFKVDEVVFPGMT+RFRIFEPRYRALVKQCLAED PL ILPLSRGGNTVAT ARV+GL++VE DGRCEVE+TGIARC V+TMWMKGESFGLFEA +ELFGDEQ K E+ + GT + PR TVD G G+EE + AGG +GE L+A+LPELERLRIEVS IMQKELYRTRTRGRSPLWP WDGSVS DA AA TV +PPLP PLT D SS + GE D+ GG V SSIGG+DPCDLDAEALSYWAA NVEAGALMKHEWLSSTSTA RLRGVRDLCRFALARHRDRS VD VLSRPLSALRDLTSR Sbjct: 2 DTLERVQEQVRALEQQSRQXXXXXXXXXXXXX---QLGVFKVDEVVFPGMTKRFRIFEPRYRALVKQCLAEDEPLAILPLSRGGNTVATTARVSGLYNVEADGRCEVEMTGIARCSVKTMWMKGESFGLFEAEVELFGDEQAKAEEETEVNTGTAPEQPRDATVDAAGETF---GQEETGGTDQVGRKGKGAGGDRGDGERLMAELPELERLRIEVSAIMQKELYRTRTRGRSPLWPSWDGSVSHGDAQAALTVTSPPLPTPLTIKTADDSVEAAA---------SSSSGDCSNSAVDGGGGEYDTVDGNGGGEIGVGDKSSIGGLDPCDLDAEALSYWAAHNVEAGALMKHEWLSSTSTAARLRGVRDLCRFALARHRDRSTVDGGVLSRPLSALRDLTSR 388
BLAST of mRNA_L-elsbetiae_contig6724.15468.1 vs. uniprot
Match: A0A4D9CXP4_9STRA (Lon N-terminal domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXP4_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 7.340e-8 Identity = 42/117 (35.90%), Postives = 68/117 (58.12%), Query Frame = 1 Query: 1243 LGVFKVDEVVFPGMTRRFRIFEPRYRALVKQCLAEDRPLVILPLSRGGNTVATAARVTGLHSVEED-GRCEVEITGIARCKVETMWMKGESFGLFEAVIELFGDEQDKEEDSQGTEA 1590 L +F++ V+FPG + ++FEPRYR +VKQCL + P ++ ++V T A +T ++ +EE+ G + ++G R +VE+ + +SFGL A F DE D ED + EA Sbjct: 351 LPLFRLQSVLFPGCSLILKVFEPRYRRMVKQCLERNEPFGLV---HAQDSVGTLASITEVYRLEEETGVSILRVSGTRRFQVESSSLAEDSFGLLTATRARFFDE-DPVEDLEELEA 463
BLAST of mRNA_L-elsbetiae_contig6724.15468.1 vs. uniprot
Match: A0A1M3KX39_9BACT (Lon N-terminal domain-containing protein n=1 Tax='Candidatus Kapabacteria' thiocyanatum TaxID=1895771 RepID=A0A1M3KX39_9BACT) HSP 1 Score: 59.3 bits (142), Expect = 6.620e-6 Identity = 31/82 (37.80%), Postives = 48/82 (58.54%), Query Frame = 1 Query: 1243 LGVFKVDEVVFPGMTRRFRIFEPRYRALVKQCLAEDRPLVILPLSRGG-NTVATAARVTGLHSVEEDGRCEVEITGIARCKV 1485 LG+F ++ V+FP IFEPRYRAL+ +C+ E + + + +G + AARVT L EDGR +V + G+ R ++ Sbjct: 3 LGLFPLNLVLFPQSQVPLHIFEPRYRALISECMTEGKVFGVNLVEQGHLYPIGCAARVTSLTQQYEDGRMDVMVEGVQRFRL 84
BLAST of mRNA_L-elsbetiae_contig6724.15468.1 vs. uniprot
Match: A0A5J4KK61_9CHLR (ATP-dependent protease n=1 Tax=Dictyobacter vulcani TaxID=2607529 RepID=A0A5J4KK61_9CHLR) HSP 1 Score: 58.5 bits (140), Expect = 1.390e-5 Identity = 39/122 (31.97%), Postives = 62/122 (50.82%), Query Frame = 1 Query: 1240 QLGVFKVDEVVFPGMTRRFRIFEPRYRALVKQCLAEDRPLVILPLSRGGNT--------VATAARVTGLHSVEEDGRCEVEITGIARCKVETMWMKGESFGLFEAVIELFGDEQDKEEDSQG 1581 +L +F ++ V+FPG IFEPRYR +V C AED+P ++ L + G+T V T A + LH +E DG ++ GI R ++ + + A++E + D+ EE G Sbjct: 7 ELPLFPLNVVLFPGTVLPLHIFEPRYRQMVADCQAEDKPFGVV-LVKAGSTFMHEEACEVGTLAEIHNLHQLE-DGGYDLMAVGIRRFRIVSQHREK---SYLSALVEPYEDKHASEEQLTG 123
BLAST of mRNA_L-elsbetiae_contig6724.15468.1 vs. uniprot
Match: A0A7V2B193_RHOMR (ATP-dependent protease n=2 Tax=Bacteria TaxID=2 RepID=A0A7V2B193_RHOMR) HSP 1 Score: 57.4 bits (137), Expect = 3.020e-5 Identity = 30/87 (34.48%), Postives = 50/87 (57.47%), Query Frame = 1 Query: 1240 QLGVFKVDEVVFPGMTRRFRIFEPRYRALVKQCLAEDRPLVILPLSRGGNT-VATAARVTGLHSVEEDGRCEVEITGIARCKVETMW 1497 +L +F + V++PG IFEPRYR L++ CLA+D P I+ G V + AR+T + + DGR ++ +TG R ++ ++ Sbjct: 5 RLPLFPLGVVLYPGERLPLHIFEPRYRDLIRDCLAQDVPFGIVLAEEGRLARVGSTARITRILARYADGRMDILVTGEERFRIVQLY 91 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6724.15468.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6724.15468.1 >prot_L-elsbetiae_contig6724.15468.1 ID=prot_L-elsbetiae_contig6724.15468.1|Name=mRNA_L-elsbetiae_contig6724.15468.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=739bp MMLRRLTRFSRPNAARWTRSHGVRSLRVNAAVNAHRDGKTAVDDCLERVLback to top mRNA from alignment at L-elsbetiae_contig6724:1309..10719+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6724.15468.1 ID=mRNA_L-elsbetiae_contig6724.15468.1|Name=mRNA_L-elsbetiae_contig6724.15468.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9411bp|location=Sequence derived from alignment at L-elsbetiae_contig6724:1309..10719+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6724:1309..10719+ >mRNA_L-elsbetiae_contig6724.15468.1 ID=mRNA_L-elsbetiae_contig6724.15468.1|Name=mRNA_L-elsbetiae_contig6724.15468.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4434bp|location=Sequence derived from alignment at L-elsbetiae_contig6724:1309..10719+ (Laminarionema elsbetiae ELsaHSoW15)back to top |