mRNA_L-elsbetiae_contig6703.15448.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6703.15448.1 vs. uniprot
Match: D8LCA2_ECTSI (PDE318, predicted plastid-localised Nog1-like GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCA2_ECTSI) HSP 1 Score: 181 bits (458), Expect = 6.770e-52 Identity = 95/129 (73.64%), Postives = 100/129 (77.52%), Query Frame = 1 Query: 37 VGAPNVGKSSIVRAVSTGTPEVNSYPFTTRGMALGHMFHPESNARCQVRVRAAPRANTLRNQRQKLRKIAPHFEQIMDTPGVLSRPDGDRNEMEALTLASMQHLPTAVVFVMDLSGHSGHLSSLENQVR 423 VGAPNVGKSSIVRAVSTGTPEVNSYPFTTRGMALGHMFHPE+NAR Q IMDTPGVLSRPDG+RNEMEALTLASMQHLPTAV+FVMDLSGHSGHLSSLENQ++ Sbjct: 309 VGAPNVGKSSIVRAVSTGTPEVNSYPFTTRGMALGHMFHPETNARYQ----------------------------IMDTPGVLSRPDGERNEMEALTLASMQHLPTAVIFVMDLSGHSGHLSSLENQMQ 409
BLAST of mRNA_L-elsbetiae_contig6703.15448.1 vs. uniprot
Match: A0A7S2UYR3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYR3_9STRA) HSP 1 Score: 157 bits (397), Expect = 2.930e-43 Identity = 83/128 (64.84%), Postives = 92/128 (71.88%), Query Frame = 1 Query: 37 VGAPNVGKSSIVRAVSTGTPEVNSYPFTTRGMALGHMFHPESNARCQVRVRAAPRANTLRNQRQKLRKIAPHFEQIMDTPGVLSRPDGDRNEMEALTLASMQHLPTAVVFVMDLSGHSGHLSSLENQV 420 VGAPNVGKSSIVR+VSTGTPEVN+YPFTTRGM LGHM+HPE+ A+ QV MDTPG+LSRPDG+RNEMEALTLASMQHLPTAV+FVMD+SG SG SS E QV Sbjct: 258 VGAPNVGKSSIVRSVSTGTPEVNNYPFTTRGMTLGHMYHPETEAKSQV----------------------------MDTPGLLSRPDGERNEMEALTLASMQHLPTAVIFVMDMSGLSGEQSSFEAQV 357
BLAST of mRNA_L-elsbetiae_contig6703.15448.1 vs. uniprot
Match: A0A7S3UNF7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UNF7_HETAK) HSP 1 Score: 150 bits (379), Expect = 5.010e-42 Identity = 77/128 (60.16%), Postives = 90/128 (70.31%), Query Frame = 1 Query: 37 VGAPNVGKSSIVRAVSTGTPEVNSYPFTTRGMALGHMFHPESNARCQVRVRAAPRANTLRNQRQKLRKIAPHFEQIMDTPGVLSRPDGDRNEMEALTLASMQHLPTAVVFVMDLSGHSGHLSSLENQV 420 VGAPNVGKSSIVR++STGTPEVN+YPFTTRGM +GH++HP + + QV MDTPGVLSRPD +RNEMEALTLASMQHLPTAV+FVMD+SG SG SS+E Q+ Sbjct: 113 VGAPNVGKSSIVRSISTGTPEVNNYPFTTRGMTMGHLYHPATGRKAQV----------------------------MDTPGVLSRPDSERNEMEALTLASMQHLPTAVMFVMDMSGLSGEQSSIEKQI 212
BLAST of mRNA_L-elsbetiae_contig6703.15448.1 vs. uniprot
Match: A0A835YQD8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQD8_9STRA) HSP 1 Score: 150 bits (380), Expect = 5.600e-41 Identity = 80/128 (62.50%), Postives = 90/128 (70.31%), Query Frame = 1 Query: 37 VGAPNVGKSSIVRAVSTGTPEVNSYPFTTRGMALGHMFHPESNARCQVRVRAAPRANTLRNQRQKLRKIAPHFEQIMDTPGVLSRPDGDRNEMEALTLASMQHLPTAVVFVMDLSGHSGHLSSLENQV 420 VGAPNVGKSSIVR +STGTPEVN+YPFTTRGM +GHMFHP +N R Q+ MDTPGVLSRPD +RN MEALTLASMQHLPTAV+FVMDLSG+SG S++E QV Sbjct: 228 VGAPNVGKSSIVRTLSTGTPEVNNYPFTTRGMTMGHMFHPVTNQRYQM----------------------------MDTPGVLSRPDEERNCMEALTLASMQHLPTAVIFVMDLSGYSGEQSTVEKQV 327
BLAST of mRNA_L-elsbetiae_contig6703.15448.1 vs. uniprot
Match: A0A4D9D853_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D853_9STRA) HSP 1 Score: 141 bits (356), Expect = 1.770e-37 Identity = 75/130 (57.69%), Postives = 93/130 (71.54%), Query Frame = 1 Query: 37 VGAPNVGKSSIVRAVSTGTPEVNSYPFTTRGMALGHMFHPE-SNARCQVRVRAAPRANTLRNQRQKLRKIAPHFEQIMDTPGVLSRPDGDRNEMEALTLASMQHLPTAVVFVMDLSGHSGHLSSLENQVR 423 VGAPNVGKSSIVRA+S+GTPEVN+YPFTTRGM LGH+ + + + +CQV MDTPGVL+RPD +RNEME+LTLASM HLPTAV+FV+DL+G+SG LSS+ENQ++ Sbjct: 224 VGAPNVGKSSIVRAISSGTPEVNNYPFTTRGMTLGHLQYEDWAEGQCQV----------------------------MDTPGVLNRPDEERNEMESLTLASMLHLPTAVMFVLDLTGNSGALSSIENQIQ 325
BLAST of mRNA_L-elsbetiae_contig6703.15448.1 vs. uniprot
Match: W7U3X0_9STRA (Gtp-binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3X0_9STRA) HSP 1 Score: 142 bits (357), Expect = 6.230e-37 Identity = 76/130 (58.46%), Postives = 92/130 (70.77%), Query Frame = 1 Query: 37 VGAPNVGKSSIVRAVSTGTPEVNSYPFTTRGMALGHMFHPE-SNARCQVRVRAAPRANTLRNQRQKLRKIAPHFEQIMDTPGVLSRPDGDRNEMEALTLASMQHLPTAVVFVMDLSGHSGHLSSLENQVR 423 VGAPNVGKSSIVRA+STGTPEVN+YPFTTRGM LGH+ + + +CQV MDTPGVL+RPD +RNEME+LTLASM HLPTAV+FV+DL+G+SG LSS+ENQ++ Sbjct: 333 VGAPNVGKSSIVRAISTGTPEVNNYPFTTRGMTLGHLQYEDWVEGQCQV----------------------------MDTPGVLNRPDEERNEMESLTLASMLHLPTAVMFVLDLTGNSGALSSIENQIQ 434
BLAST of mRNA_L-elsbetiae_contig6703.15448.1 vs. uniprot
Match: A0A7S2WHZ7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WHZ7_9STRA) HSP 1 Score: 134 bits (337), Expect = 2.060e-34 Identity = 72/128 (56.25%), Postives = 86/128 (67.19%), Query Frame = 1 Query: 37 VGAPNVGKSSIVRAVSTGTPEVNSYPFTTRGMALGHMFHPESNARCQVRVRAAPRANTLRNQRQKLRKIAPHFEQIMDTPGVLSRPDGDRNEMEALTLASMQHLPTAVVFVMDLSGHSGH-LSSLENQ 417 VGAPNVGKSSI+ A+STGTPE+N+YPFTTRGM LGHMF + + Q+MDTPGVL+RPDGDRNEME+LT+ASM HLPTAV+FV DL+G SG SS+E+Q Sbjct: 252 VGAPNVGKSSIINAISTGTPEINNYPFTTRGMTLGHMFDDVDGFQARY--------------------------QVMDTPGVLARPDGDRNEMESLTIASMLHLPTAVMFVFDLTGLSGDDKSSIEDQ 353
BLAST of mRNA_L-elsbetiae_contig6703.15448.1 vs. uniprot
Match: A0A7S2UG14_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UG14_9STRA) HSP 1 Score: 127 bits (319), Expect = 3.600e-34 Identity = 77/153 (50.33%), Postives = 101/153 (66.01%), Query Frame = 1 Query: 37 VGAPNVGKSSIVRAVSTGTPEVNSYPFTTRGMALGHM--FHPESNARCQVRVRAAPRANTLRNQRQKLRKIAPHFE-----QIMDTPGVLSRPDGDRNEMEALTLASMQHLPTAVVFVMDLSGHSG-HLSSLENQVRYFLEV---FFLRPLIS 462 VGAPNVGKSSIVRA+S+ +PEVN+YPFTTRGM LGH+ F + + P A + R + + + QIMD+PG+L RPD +RNEME+LTLA+MQHLPTAV++VMDLSG +G SS+++Q++ EV F RP I Sbjct: 32 VGAPNVGKSSIVRAISSASPEVNNYPFTTRGMTLGHVEVFWSDDATTAAAVI---PTAGSGGRHRSSVNEYEGSYAFSQLCQIMDSPGLLVRPDNERNEMESLTLAAMQHLPTAVMYVMDLSGGAGDRCSSIQDQLQLRKEVRSRFPRRPWID 181
BLAST of mRNA_L-elsbetiae_contig6703.15448.1 vs. uniprot
Match: B7FQM6_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQM6_PHATC) HSP 1 Score: 129 bits (324), Expect = 1.500e-32 Identity = 81/149 (54.36%), Postives = 100/149 (67.11%), Query Frame = 1 Query: 37 VGAPNVGKSSIVRAVSTGTPEVNSYPFTTRGMALGHM--FHPESNARCQVRVRAAPRANTLRNQRQKLRKIA-PHFEQIMDTPGVLSRPDGDRNEMEALTLASMQHLPTAVVFVMDLSGHSGH-LSSLENQVRYFLEV---FFLRPLIS 462 VGAPNVGKSSIVRA+S+ PEVN+YPFTTRGM LGH+ F + A + V A R + L K A Q+MD+PG+L RPD +RNEMEALTLA+MQHLPTAV++VMDLSG +G SS+ +Q++ EV F RP I Sbjct: 240 VGAPNVGKSSIVRAISSADPEVNNYPFTTRGMTLGHVEVFWSNTEAIAKAVVPDAKRKLGAVAEEVVLGKYAFSQLCQVMDSPGLLVRPDEERNEMEALTLAAMQHLPTAVMYVMDLSGEAGDKCSSIADQLQLRREVRQRFPRRPWID 388
BLAST of mRNA_L-elsbetiae_contig6703.15448.1 vs. uniprot
Match: A0A7S2EU30_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EU30_TRICV) HSP 1 Score: 127 bits (318), Expect = 1.010e-31 Identity = 79/160 (49.38%), Postives = 101/160 (63.12%), Query Frame = 1 Query: 37 VGAPNVGKSSIVRAVSTGTPEVNSYPFTTRGMALGHM---FHPESNARCQV-----------RVRAAPRANTLRNQRQKLRKIAPHFEQIMDTPGVLSRPDGDRNEMEALTLASMQHLPTAVVFVMDLSGHSG-HLSSLENQVRYFLEV---FFLRPLIS 462 VGAPNVGKSSIVRA+S+GTPEVN+YPFTTRGM LGH+ + E A V + + + + +R R QIMD+PG+L RPD RNEMEALT+A+M HLPTAV++VMDLSG +G SS+E+Q++ +V F RP I Sbjct: 220 VGAPNVGKSSIVRAISSGTPEVNNYPFTTRGMTLGHVEVFWEDEGTAAAAVIPLTDDDYEEGQKKPSQFERAVEMERMLGRYSFSQLCQIMDSPGLLVRPDDQRNEMEALTMAAMSHLPTAVMYVMDLSGGAGDRCSSVEHQLQLRRDVRARFPRRPWID 379 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6703.15448.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6703.15448.1 >prot_L-elsbetiae_contig6703.15448.1 ID=prot_L-elsbetiae_contig6703.15448.1|Name=mRNA_L-elsbetiae_contig6703.15448.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=156bp PVLLAACALCSQVGAPNVGKSSIVRAVSTGTPEVNSYPFTTRGMALGHMFback to top mRNA from alignment at L-elsbetiae_contig6703:9528..10513- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6703.15448.1 ID=mRNA_L-elsbetiae_contig6703.15448.1|Name=mRNA_L-elsbetiae_contig6703.15448.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=986bp|location=Sequence derived from alignment at L-elsbetiae_contig6703:9528..10513- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6703:9528..10513- >mRNA_L-elsbetiae_contig6703.15448.1 ID=mRNA_L-elsbetiae_contig6703.15448.1|Name=mRNA_L-elsbetiae_contig6703.15448.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=936bp|location=Sequence derived from alignment at L-elsbetiae_contig6703:9528..10513- (Laminarionema elsbetiae ELsaHSoW15)back to top |