mRNA_L-elsbetiae_contig67.15440.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig67.15440.1 vs. uniprot
Match: D7FH14_ECTSI (Hypothetical F-box and leucine rich repeat containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FH14_ECTSI) HSP 1 Score: 525 bits (1352), Expect = 2.660e-179 Identity = 347/383 (90.60%), Postives = 362/383 (94.52%), Query Frame = 2 Query: 209 MPEATTMKMPEDQFLNVLSYLVVESVFAMSSTCRQLREWCSLFKAVDAGEEELGNRDLALLVRRFPAVNDLTVRFASRLTSAYEVLSQIGPQLVSLKLTGARIIRDDTFRDMVRTFESMRYLSLDGTFYVKSQAINALAKAGQQLQEVCLCGFRQLKDEDVQLLLDSCPSLSVLSVSDCTTLGSLILRSKQLKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVESVVGSCLALQHLGLKGCSALVSPSIQSAKLRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSMLGIKNLTLNCNKLVYANLRGSYKLESSNIQSRCPGLSMVDLCGTSINPEAFARSDGEGEGDVIQGGAPLPWHTY 1357 M TMKMPEDQFLNVLSYLVV+SVFAMSSTCRQL EWCSLFKAVDAGEEEL N DLALLVRRFPAVNDLT+R ASRLT+AYEVL++IGPQLVSLKLTGARIIRDDTFRDMVRTFESMRYLSLDGTFYVKSQAINALAKAGQQLQEV LCGFRQLKDEDVQ LLDSCPSLSVLSV+DCTTLGSL+LRS QLK+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VES++GSCLAL+HLGLKGCSALVSP+IQSAKLRS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DLSMLG+KNLTLNCNKLVYANLRGSYKLES+NIQSRCPGLS+VDLCGT INPEAF RSDGEGEGDVIQGGAPLPWHTY Sbjct: 1 MLNTATMKMPEDQFLNVLSYLVVDSVFAMSSTCRQLHEWCSLFKAVDAGEEELRNADLALLVRRFPAVNDLTIRSASRLTTAYEVLAEIGPQLVSLKLTGARIIRDDTFRDMVRTFESMRYLSLDGTFYVKSQAINALAKAGQQLQEVSLCGFRQLKDEDVQFLLDSCPSLSVLSVADCTTLGSLVLRSTQLKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDCAVESLMGSCLALEHLGLKGCSALVSPTIQSAKLRSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISLDLSMLGVKNLTLNCNKLVYANLRGSYKLESANIQSRCPGLSVVDLCGTKINPEAFVRSDGEGEGDVIQGGAPLPWHTY 383 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig67.15440.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig67.15440.1 >prot_L-elsbetiae_contig67.15440.1 ID=prot_L-elsbetiae_contig67.15440.1|Name=mRNA_L-elsbetiae_contig67.15440.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=385bp MMPEATTMKMPEDQFLNVLSYLVVESVFAMSSTCRQLREWCSLFKAVDAGback to top mRNA from alignment at L-elsbetiae_contig67:42454..50085+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig67.15440.1 ID=mRNA_L-elsbetiae_contig67.15440.1|Name=mRNA_L-elsbetiae_contig67.15440.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7632bp|location=Sequence derived from alignment at L-elsbetiae_contig67:42454..50085+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig67:42454..50085+ >mRNA_L-elsbetiae_contig67.15440.1 ID=mRNA_L-elsbetiae_contig67.15440.1|Name=mRNA_L-elsbetiae_contig67.15440.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2310bp|location=Sequence derived from alignment at L-elsbetiae_contig67:42454..50085+ (Laminarionema elsbetiae ELsaHSoW15)back to top |