|
Homology
BLAST of mRNA_L-elsbetiae_contig6697.15432.1 vs. uniprot
Match: D7FWG9_ECTSI (Putative methylene tetrahydrofolate dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWG9_ECTSI) HSP 1 Score: 451 bits (1161), Expect = 1.950e-151 Identity = 230/246 (93.50%), Postives = 239/246 (97.15%), Query Frame = 1
Query: 1 GVMIYYPVFGAFPSFYGGSMDDYLRDSVSIRKDVEGLSNTYRRNLYHNVRYVDEAKTKKCILPCTPLAVVKIMEHVGVYDESLPVGDRLQGKTVTIINRSEIVGRPLAAMLANDGATIYSIDVDSIFVFQRGALRKTEATPEEAVGQSDVVVTGVPSKSYKLSASWLKEGAAVINVSTFKNVDEEEVLKIPGVRYVPMVGKVTVAVLERNLLRLHENFGEDMAAETLVKRASIDAGAPAATSVQEK 738
GVMIYYPVFGAFPSF+GGSMDDYLRD+VSIRKDVEGLSNTYRRNLYHNVR+VDEAKTKKCILPCTPLAVVKIMEHVGVYDESLPVGDRLQGKTVTIINRSEIVGRPLAAMLANDGATIYSIDVDSIFVF+RGALRKTEATPEEAV QSDVVVTGVPSK+YKLSASWLKEG+A+INVSTFKNVDEE+VLKIPGVRYVPMVGKVTVA+LERNLLRLHENFGEDMAAETLVKRASIDAG S QEK
Sbjct: 97 GVMIYYPVFGAFPSFFGGSMDDYLRDTVSIRKDVEGLSNTYRRNLYHNVRFVDEAKTKKCILPCTPLAVVKIMEHVGVYDESLPVGDRLQGKTVTIINRSEIVGRPLAAMLANDGATIYSIDVDSIFVFKRGALRKTEATPEEAVKQSDVVVTGVPSKAYKLSASWLKEGSAIINVSTFKNVDEEDVLKIPGVRYVPMVGKVTVAMLERNLLRLHENFGEDMAAETLVKRASIDAG-----SSQEK 337
BLAST of mRNA_L-elsbetiae_contig6697.15432.1 vs. uniprot
Match: A0A835ZC74_9STRA (Putative methylene tetrahydrofolate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC74_9STRA) HSP 1 Score: 334 bits (856), Expect = 9.110e-106 Identity = 163/236 (69.07%), Postives = 194/236 (82.20%), Query Frame = 1
Query: 1 GVMIYYPVFGAFPSFYGGSMDDYLRDSVSIRKDVEGLSNTYRRNLYHNVRYVDEAKTKKCILPCTPLAVVKIMEHVGVYDESLPVGDRLQGKTVTIINRSEIVGRPLAAMLANDGATIYSIDVDSIFVFQRGALRKTEATPEEAVGQSDVVVTGVPSKSYKLSASWLKEGAAVINVSTFKNVDEEEVLKIPGVRYVPMVGKVTVAVLERNLLRLHENFGEDMAAETLVKRASIDAG 708
G+M+YYPVFGAFPSFYGG+MDDYLRDS+S KDVEGL + YRRNLY NVRYVD A+T+KCILPCTPL+ VKI+EH+ VYD +LPVG RL+GK VTIINRSEIVGRPLAAMLANDGATIYSID+DSI+ F+RG L + T E A+ +S V+ GVPS+ YKL W++ G V+NVSTFKNV EEE+L++PGV+YVPMVGKVTVA+LERNLLRLH NF A + K+A +D G
Sbjct: 101 GIMVYYPVFGAFPSFYGGTMDDYLRDSISHEKDVEGLCHLYRRNLYRNVRYVDAAETQKCILPCTPLSCVKILEHLAVYDAALPVGARLEGKVVTIINRSEIVGRPLAAMLANDGATIYSIDIDSIYEFRRGRLVVVDETAEGAIRRSHAVICGVPSRDYKLVTEWVQPGTVVVNVSTFKNVHEEELLQVPGVKYVPMVGKVTVAMLERNLLRLHGNFAA--ARPSAAKKAKLDNG 334
BLAST of mRNA_L-elsbetiae_contig6697.15432.1 vs. uniprot
Match: K3WD34_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WD34_GLOUD) HSP 1 Score: 320 bits (820), Expect = 1.240e-101 Identity = 145/218 (66.51%), Postives = 186/218 (85.32%), Query Frame = 1
Query: 1 GVMIYYPVFGAFPSFYGGSMDDYLRDSVSIRKDVEGLSNTYRRNLYHNVRYVDEAKTKKCILPCTPLAVVKIMEHVGVYDESLPVGDRLQGKTVTIINRSEIVGRPLAAMLANDGATIYSIDVDSIFVFQRGALRKTEATPEEAVGQSDVVVTGVPSKSYKLSASWLKEGAAVINVSTFKNVDEEEVLKIPGVRYVPMVGKVTVAVLERNLLRLHENF 654
G+++YYP FG FPSF+GG+MDD+LRDS+SI+KDVEGL YR NLY N+RYVD+ KT+KC+LPCTPLA+VKI+EH+ VYD++ PVG+ L G +T+INRS+IVGRPLAAM ANDGA +YS+D+DS+++F+RG L KTE TPE A +S V++TGVP KSYKL W+ E VINV++FKNVDEE +L+IPGV+YVP+VGKVTVA+L+RNLLRL+ENF
Sbjct: 26 GIIVYYPCFGIFPSFFGGTMDDFLRDSISIKKDVEGLCQFYRGNLYRNIRYVDDEKTQKCVLPCTPLAIVKILEHLNVYDKTKPVGNHLSGVNITVINRSDIVGRPLAAMFANDGADVYSVDIDSLYLFRRGKLIKTEETPETACKKSRVIITGVPVKSYKLPLEWVSENTVVINVASFKNVDEEALLQIPGVQYVPLVGKVTVAMLQRNLLRLYENF 243
BLAST of mRNA_L-elsbetiae_contig6697.15432.1 vs. uniprot
Match: A0A3M6VAY0_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VAY0_9STRA) HSP 1 Score: 316 bits (809), Expect = 6.340e-99 Identity = 144/218 (66.06%), Postives = 185/218 (84.86%), Query Frame = 1
Query: 1 GVMIYYPVFGAFPSFYGGSMDDYLRDSVSIRKDVEGLSNTYRRNLYHNVRYVDEAKTKKCILPCTPLAVVKIMEHVGVYDESLPVGDRLQGKTVTIINRSEIVGRPLAAMLANDGATIYSIDVDSIFVFQRGALRKTEATPEEAVGQSDVVVTGVPSKSYKLSASWLKEGAAVINVSTFKNVDEEEVLKIPGVRYVPMVGKVTVAVLERNLLRLHENF 654
G+++YYP FG FPSF+GG+MDD+LRDS++I+KDVEGL YR NLY N+RYVDE +T+KC+LPCTPLA+VKI+EH+G+YD+S P G+ L+G +VT+INRS+IVGRPLAAMLANDGA +YS D+DS+++F+RG L +E T E A +S V++TGVP KSYKL W+ E VINV++FKNVDE E+LKI GV+YVP+VGKVTVA+LERNLLRL+ENF
Sbjct: 99 GILVYYPCFGPFPSFFGGTMDDFLRDSINIKKDVEGLCQFYRGNLYRNIRYVDEEETQKCVLPCTPLAIVKILEHIGIYDKSKPTGNHLEGVSVTVINRSDIVGRPLAAMLANDGADVYSADIDSLYLFRRGKLIPSEETQETACRKSRVIITGVPVKSYKLPLEWVSENTVVINVASFKNVDETELLKIKGVKYVPLVGKVTVAMLERNLLRLYENF 316
BLAST of mRNA_L-elsbetiae_contig6697.15432.1 vs. uniprot
Match: A0A024TJB3_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A024TJB3_9STRA) HSP 1 Score: 314 bits (805), Expect = 1.570e-98 Identity = 139/218 (63.76%), Postives = 186/218 (85.32%), Query Frame = 1
Query: 1 GVMIYYPVFGAFPSFYGGSMDDYLRDSVSIRKDVEGLSNTYRRNLYHNVRYVDEAKTKKCILPCTPLAVVKIMEHVGVYDESLPVGDRLQGKTVTIINRSEIVGRPLAAMLANDGATIYSIDVDSIFVFQRGALRKTEATPEEAVGQSDVVVTGVPSKSYKLSASWLKEGAAVINVSTFKNVDEEEVLKIPGVRYVPMVGKVTVAVLERNLLRLHENF 654
G+++YYP FG+FPSFYGG+MDD++RDS+SI+KDVEGL + YR NLY N+RYVD+ +T+KC+LPCTPLA++KI+EH+ +Y+ P G+ L G+ +TIINRS+IVGRPLAAMLANDGA ++S+D+ S+++F+RG L +T+ TPE A +SDV++TGVP KSYKL W+ EG VINV+++KNVDEE +LKIP V YVP+VGKVTVA+LERNL+RL+ENF
Sbjct: 85 GILVYYPCFGSFPSFYGGTMDDFIRDSISIKKDVEGLCHFYRSNLYRNIRYVDDERTQKCVLPCTPLAIIKILEHLNIYNFGQPEGEHLLGRRITIINRSDIVGRPLAAMLANDGADVFSVDISSLYLFRRGKLIETDETPESACRKSDVIITGVPVKSYKLPLEWVSEGTVVINVASYKNVDEEALLKIPNVTYVPLVGKVTVAMLERNLMRLYENF 302
BLAST of mRNA_L-elsbetiae_contig6697.15432.1 vs. uniprot
Match: D0NYB0_PHYIT (Tetrahydrofolate dehydrogenase n=13 Tax=Peronosporaceae TaxID=4777 RepID=D0NYB0_PHYIT) HSP 1 Score: 314 bits (804), Expect = 2.690e-98 Identity = 143/218 (65.60%), Postives = 184/218 (84.40%), Query Frame = 1
Query: 1 GVMIYYPVFGAFPSFYGGSMDDYLRDSVSIRKDVEGLSNTYRRNLYHNVRYVDEAKTKKCILPCTPLAVVKIMEHVGVYDESLPVGDRLQGKTVTIINRSEIVGRPLAAMLANDGATIYSIDVDSIFVFQRGALRKTEATPEEAVGQSDVVVTGVPSKSYKLSASWLKEGAAVINVSTFKNVDEEEVLKIPGVRYVPMVGKVTVAVLERNLLRLHENF 654
G+++YYP FGAFPSF+GG+MDD+LRDS+SI+KDVEGL YR NLY N+RYVD+ KT+KC+LPCTPLA+VKI+EH+GVYD++ P G+ L G +T+INRS+IVGRPLAA+LANDGA +YS D+DS+++F+RG L +E T E A +S V++TGVP KSYKL W+ E +INV++FKNVDE E+LKI GV+YVP+VGKVTVA+LERNLLRL+ENF
Sbjct: 91 GILVYYPCFGAFPSFFGGTMDDFLRDSISIKKDVEGLCQFYRGNLYRNIRYVDDEKTQKCVLPCTPLAIVKILEHLGVYDKTKPTGNHLSGVNITVINRSDIVGRPLAAVLANDGADVYSADIDSLYLFRRGKLIPSEETQETACKKSRVIITGVPVKSYKLPLEWVSENTVIINVASFKNVDEAELLKIKGVQYVPLVGKVTVAMLERNLLRLYENF 308
BLAST of mRNA_L-elsbetiae_contig6697.15432.1 vs. uniprot
Match: A0A8K1CL91_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CL91_PYTOL) HSP 1 Score: 313 bits (803), Expect = 3.670e-98 Identity = 141/218 (64.68%), Postives = 186/218 (85.32%), Query Frame = 1
Query: 1 GVMIYYPVFGAFPSFYGGSMDDYLRDSVSIRKDVEGLSNTYRRNLYHNVRYVDEAKTKKCILPCTPLAVVKIMEHVGVYDESLPVGDRLQGKTVTIINRSEIVGRPLAAMLANDGATIYSIDVDSIFVFQRGALRKTEATPEEAVGQSDVVVTGVPSKSYKLSASWLKEGAAVINVSTFKNVDEEEVLKIPGVRYVPMVGKVTVAVLERNLLRLHENF 654
G+++YYP FGAFPSFYGG+MDD+LRDS+SI+KDVEGLS YR NLY N+R+VD+A+T+KC+LPCTPLA++KI+EH+ VYD+ P G++L G +T+INRS+IVGRPLAAMLANDGA +YS+D+DS+++F+RG L +T+ TP A +S V++TGVP K YKL W+ E VINV++FKNVDE +L+IPGV+YVP+VGKVTVA+L+RNLLRL+ENF
Sbjct: 90 GIIVYYPCFGAFPSFYGGTMDDFLRDSISIKKDVEGLSQFYRANLYRNIRFVDDAQTQKCVLPCTPLAIIKILEHLNVYDKHQPHGEQLTGINITVINRSDIVGRPLAAMLANDGADVYSVDIDSLYLFRRGKLIQTDETPATACKKSRVIITGVPVKDYKLPLEWVSENTVVINVASFKNVDEAALLQIPGVQYVPLVGKVTVAMLQRNLLRLYENF 307
BLAST of mRNA_L-elsbetiae_contig6697.15432.1 vs. uniprot
Match: A0A3R7KKQ0_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A3R7KKQ0_9STRA) HSP 1 Score: 312 bits (799), Expect = 2.150e-97 Identity = 143/218 (65.60%), Postives = 183/218 (83.94%), Query Frame = 1
Query: 1 GVMIYYPVFGAFPSFYGGSMDDYLRDSVSIRKDVEGLSNTYRRNLYHNVRYVDEAKTKKCILPCTPLAVVKIMEHVGVYDESLPVGDRLQGKTVTIINRSEIVGRPLAAMLANDGATIYSIDVDSIFVFQRGALRKTEATPEEAVGQSDVVVTGVPSKSYKLSASWLKEGAAVINVSTFKNVDEEEVLKIPGVRYVPMVGKVTVAVLERNLLRLHENF 654
G+++YYP FG FPSF+GG+MDD+LRDS+SI+KDVEGL YR NLY N+RYVD+ KT+KC+LPCTPLA+VKI+EH+GVYD++ G+ L+G +T+INRS+IVGRPLAAMLANDGA +YS D+DS+++F+RG L +E T E A +S V++TGVP KSYKL W+ E VINV++FKNVDE E+LKI GV+YVP+VGKVTVA+LERNLLRL+ENF
Sbjct: 102 GILVYYPCFGPFPSFFGGTMDDFLRDSISIKKDVEGLCQFYRGNLYRNIRYVDDDKTQKCVLPCTPLAIVKILEHIGVYDKTKATGNHLEGINITVINRSDIVGRPLAAMLANDGADVYSADIDSLYLFRRGKLIPSEETQESACKKSRVIITGVPVKSYKLPLEWVSENTVVINVASFKNVDEAELLKIKGVQYVPLVGKVTVAMLERNLLRLYENF 319
BLAST of mRNA_L-elsbetiae_contig6697.15432.1 vs. uniprot
Match: A0A2D4C1E5_PYTIN (Putative methylene tetrahydrofolate dehydrogenase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C1E5_PYTIN) HSP 1 Score: 311 bits (797), Expect = 3.490e-97 Identity = 139/218 (63.76%), Postives = 184/218 (84.40%), Query Frame = 1
Query: 1 GVMIYYPVFGAFPSFYGGSMDDYLRDSVSIRKDVEGLSNTYRRNLYHNVRYVDEAKTKKCILPCTPLAVVKIMEHVGVYDESLPVGDRLQGKTVTIINRSEIVGRPLAAMLANDGATIYSIDVDSIFVFQRGALRKTEATPEEAVGQSDVVVTGVPSKSYKLSASWLKEGAAVINVSTFKNVDEEEVLKIPGVRYVPMVGKVTVAVLERNLLRLHENF 654
G+++YYP FG+FPSFYGG+MDD+LRDS+SI+KDVEGL YR NLY N+R+VDEA T+KC+LPCTPLA+VKI+EH+ VYD P G +L G +T+INRS+IVGRPLAAMLANDGA ++S+D++S+++F+RG L +T+ TPE A +S V++TGVP KSYKL W+ V+NV++FKNVDE+ +L+IPGV+YVP+VGKVTVA+L+RNLLRL+ENF
Sbjct: 96 GILVYYPCFGSFPSFYGGTMDDFLRDSISIKKDVEGLGQFYRGNLYRNIRFVDEAMTQKCVLPCTPLAIVKILEHLNVYDMRQPAGQQLNGVKITVINRSDIVGRPLAAMLANDGADVFSVDIESLYLFRRGKLIQTDETPETACKKSQVIITGVPVKSYKLPLDWVSPNTVVVNVASFKNVDEDALLQIPGVQYVPLVGKVTVAMLQRNLLRLYENF 313
BLAST of mRNA_L-elsbetiae_contig6697.15432.1 vs. uniprot
Match: A0A5D6Y6V5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6V5_9STRA) HSP 1 Score: 310 bits (794), Expect = 9.130e-97 Identity = 138/218 (63.30%), Postives = 186/218 (85.32%), Query Frame = 1
Query: 1 GVMIYYPVFGAFPSFYGGSMDDYLRDSVSIRKDVEGLSNTYRRNLYHNVRYVDEAKTKKCILPCTPLAVVKIMEHVGVYDESLPVGDRLQGKTVTIINRSEIVGRPLAAMLANDGATIYSIDVDSIFVFQRGALRKTEATPEEAVGQSDVVVTGVPSKSYKLSASWLKEGAAVINVSTFKNVDEEEVLKIPGVRYVPMVGKVTVAVLERNLLRLHENF 654
G+++YYP FGAFPSF+GG+MDD+LRDSVSI+KDVEGL YR NLY N+RYVD+ KT+KC+LPCTPLA+VKI+EH+ +YD++ G+ L G ++T+INRS+IVGRPLAA+LANDGA ++S+D+DS+++F+RG L +T+ TP A +S V++TGVP KSYKL W+ + VINV++FKNVDEE +L++PGV+YVP+VGKVTVA+L+RNLLRL+ENF
Sbjct: 94 GILVYYPCFGAFPSFFGGTMDDFLRDSVSIKKDVEGLGQFYRGNLYRNIRYVDDEKTQKCVLPCTPLAIVKILEHLNIYDKTQSTGNHLAGVSITVINRSDIVGRPLAALLANDGADVFSVDIDSLYLFRRGKLIETDETPVSACRKSRVIITGVPVKSYKLPIEWVADNTVVINVASFKNVDEEALLQVPGVQYVPLVGKVTVAMLQRNLLRLYENF 311
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 443.0 |
Seed ortholog evalue | 9.4e-122 |
Seed eggNOG ortholog | 2880.D7FWG9 |
Preferred name | MTD1 |
KEGG rclass | RC00202 |
KEGG ko | ko:K00295 |
KEGG Reaction | R01218 |
KEGG Pathway | ko00670,ko01100,map00670,map01100 |
Hectar predicted targeting category | other localisation |
GOs | GO:0003674,GO:0003824,GO:0004487,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006144,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009112,GO:0009113,GO:0009396,GO:0009987,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0017144,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042364,GO:0042398,GO:0042440,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0046655,GO:0046656,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 |
EggNOG free text desc. | methenyltetrahydrofolate cyclohydrolase activity |
EggNOG OGs | COG0190@1,KOG0089@2759 |
Ec32 ortholog description | Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain |
Ec32 ortholog | Ec-07_007470.1 |
EC | 1.5.1.15 |
COG Functional cat. | H |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko01000 |
Exons | 6 |
Model size | 2069 |
Cds size | 744 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816741.2011366-UTR-L-elsbetiae_contig6697:811..817 | 1622816741.2011366-UTR-L-elsbetiae_contig6697:811..817 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6697 812..817 + |
1691683778.8898568-UTR-L-elsbetiae_contig6697:811..817 | 1691683778.8898568-UTR-L-elsbetiae_contig6697:811..817 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6697 812..817 + |
1622816741.2845302-UTR-L-elsbetiae_contig6697:6527..7846 | 1622816741.2845302-UTR-L-elsbetiae_contig6697:6527..7846 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6697 6528..7846 + |
1691683778.9605124-UTR-L-elsbetiae_contig6697:6527..7846 | 1691683778.9605124-UTR-L-elsbetiae_contig6697:6527..7846 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6697 6528..7846 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816741.2153103-CDS-L-elsbetiae_contig6697:817..960 | 1622816741.2153103-CDS-L-elsbetiae_contig6697:817..960 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6697 818..960 + |
1691683778.9017067-CDS-L-elsbetiae_contig6697:817..960 | 1691683778.9017067-CDS-L-elsbetiae_contig6697:817..960 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6697 818..960 + |
1622816741.2270396-CDS-L-elsbetiae_contig6697:2831..2953 | 1622816741.2270396-CDS-L-elsbetiae_contig6697:2831..2953 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6697 2832..2953 + |
1691683778.9105682-CDS-L-elsbetiae_contig6697:2831..2953 | 1691683778.9105682-CDS-L-elsbetiae_contig6697:2831..2953 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6697 2832..2953 + |
1622816741.2394905-CDS-L-elsbetiae_contig6697:3761..3949 | 1622816741.2394905-CDS-L-elsbetiae_contig6697:3761..3949 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6697 3762..3949 + |
1691683778.9221652-CDS-L-elsbetiae_contig6697:3761..3949 | 1691683778.9221652-CDS-L-elsbetiae_contig6697:3761..3949 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6697 3762..3949 + |
1622816741.2516031-CDS-L-elsbetiae_contig6697:4920..5028 | 1622816741.2516031-CDS-L-elsbetiae_contig6697:4920..5028 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6697 4921..5028 + |
1691683778.931454-CDS-L-elsbetiae_contig6697:4920..5028 | 1691683778.931454-CDS-L-elsbetiae_contig6697:4920..5028 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6697 4921..5028 + |
1622816741.2631571-CDS-L-elsbetiae_contig6697:5602..5696 | 1622816741.2631571-CDS-L-elsbetiae_contig6697:5602..5696 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6697 5603..5696 + |
1691683778.940793-CDS-L-elsbetiae_contig6697:5602..5696 | 1691683778.940793-CDS-L-elsbetiae_contig6697:5602..5696 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6697 5603..5696 + |
1622816741.2737167-CDS-L-elsbetiae_contig6697:6438..6527 | 1622816741.2737167-CDS-L-elsbetiae_contig6697:6438..6527 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6697 6439..6527 + |
1691683778.9511237-CDS-L-elsbetiae_contig6697:6438..6527 | 1691683778.9511237-CDS-L-elsbetiae_contig6697:6438..6527 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6697 6439..6527 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6697.15432.1 >prot_L-elsbetiae_contig6697.15432.1 ID=prot_L-elsbetiae_contig6697.15432.1|Name=mRNA_L-elsbetiae_contig6697.15432.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=248bp
MIYYPVFGAFPSFYGGSMDDYLRDSVSIRKDVEGLSNTYRRNLYHNVRYV DEAKTKKCILPCTPLAVVKIMEHVGVYDESLPVGDRLQGKTVTIINRSEI VGRPLAAMLANDGATIYSIDVDSIFVFQRGALRKTEATPEEAVGQSDVVV TGVPSKSYKLSASWLKEGAAVINVSTFKNVDEEEVLKIPGVRYVPMVGKV TVAVLERNLLRLHENFGEDMAAETLVKRASIDAGAPAATSVQEKASA* back to topmRNA from alignment at L-elsbetiae_contig6697:812..7846+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig6697.15432.1 ID=mRNA_L-elsbetiae_contig6697.15432.1|Name=mRNA_L-elsbetiae_contig6697.15432.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7035bp|location=Sequence derived from alignment at L-elsbetiae_contig6697:812..7846+ (Laminarionema elsbetiae ELsaHSoW15) GGCGTGATGATCTACTATCCCGTGTTCGGGGCGTTTCCCTCCTTCTACGG
CGGCAGCATGGACGACTACCTCCGGGACAGCGTCTCCATTCGCAAGGACG
TGGAGGGGCTGTCCAACACCTACCGCCGAAACCTGTACCACAACGTCAGG
TACGTACATACATACCGTGTACGACACAAGAAATTTAGCGCACCCCCCTT
GGGACCGATTTCTCAAAACTCGGTCAATTGCTCCGCAAAGAGCATGCTTT
TATATTACCGAACGAACCGTTTTCCACGTTTTCGGACAGCTGCTGTGTAG
CCTCTTGATCAGGCCTTTCCAACGCCGGCCGCCCTTTTCGGTGCTGAGCG
CTCTTCTCGCTGTGGAGGTAGTATGTACATACTTGAGCTTTGAAAATCGG
TCCTGGGGGTGTGTTATCTTGCGTCACGTACGGTTATGTGTGTGTGTGTG
TGTGTACCTTGTGCTTTCGAAGCGTTTTTGGGTGCTCTTGCTTGCGGTTA
CACCTTTTTCGCACGCACAAACAAAAACAACGCCAGGCAGGCAGGCAGGC
AGGCACCGCGCGCGCGCTGTCACGAGTCTTGTCTCTTTGTACTCGTTGAG
GGTAGCCGCCCCTAAATACCCTCCGGCATTACCGCCGTTGCCATCGTGTG
TACCAGCAGCAGGCATTTAGAGGTAAATGTCAAATAAGCACAGCACACGC
GGAAAGGATCTACACTCGTTTAAAAAATAAACAATGAATCTTTTGGTGCA
GTGGTTACCGGAGAAACAATAGTTATTCGTGCTGGAACACCGCCCTGCCG
CTTCGGTACTTGTATATAATCCATAATACACAGGAAGCCGCGCACCGAAG
CTCAGGTTTAATCGGCCACCCCCTCAAGAACAAACTACACAGATGGCCCT
TAACCTCCAGCCCTTGTTTTAACCCGGAACATGATCTCAACGCGTGAGTG
CGATGGTGGCGGTCTGGCTGGTCCTCCTTGTGCTTTCGTGTTGTTGTTGT
TGTTGTTGTTGTTGTTTCTTCACATTAGCTCGCTCGTATAATCGAGATTG
CTAATTCCAAAAATCTAGCAACTCACGGCCCGTGGTCACAGAAGTGCTAG
AGCCATCAGTGGTTTTGGCTTGCAGGCCGAATCCAAACGTTTCCTGTTCT
TTTGTGATTAGACGACGAGACAAAAATATAAATAAAGCGAAAATCGCTTT
CCTTATAAAAAGACGCGTCTGGGGCGTTTGCCGGTCGGTGTCTTTTTGAA
ATTCGGAACAACCTCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCGCCTGCCCTGCATCGAAAGGCACGAG
CTCTGCNNNNNNNNNNAAAAAAAAAAAAATGCTTGTCTATAAAAAAAACC
CCTGTCCAGCGTTTTTCCGGGTGTTTTTTTTTTTGTCTTATTCCTCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCTCCTCCCCCTCCCCCCCCGAGAAAAG
TGCACCTGAGTGCCGCTAGAAAAGGTGGAAACATTCGCCGGCACGAGCCC
ATATAACCCTTAAACTCCCGCGGAACATGGCCTCACTCGTAAGGGCGATG
ATGGTTGTTTGGTCCTCTTGTGCCTTCGTGTTGTACTGGCTTTGGTGGCC
TCGTGCATTTGCCTGCAATGCCCGCCGCTGTGATGTAGAACACATGTGCA
TATAAAATCTGCGTCAACAGAGTTTTTGTCAAACGAGAGCACACGGTTGT
ATAGGGGTCTCTCCCTAGTTTCGGTCGGAAGTCGCGACGCCAGGTTTTGA
TGCCACACCGACTCGATGTCCATGCCTTCCGTGGGACGCCGTGTGGCGGG
TTTCCGCCGTGTATGTTTTTGAAGAGGGGGTGCTTGCTTCTCGCCGTTGC
TTGCTGACCCGATCCATTCATGGTCGATCCCGTCATCTACGGCCCATCCC
GTCATCCAATCCATTGTCCATCCCGTCATCCAATCCATGGTCCGTCCCGT
CCCGTCCCCTCCCGGTTCAGGTACGTGGATGAGGCCAAGACGAAGAAGTG
CATCCTGCCGTGCACGCCCCTGGCCGTCGTCAAGATCATGGAGCACGTCG
GGGTCTACGACGAGAGCCTGCCGGTGGGCGACCGCCTGCAAGGTGAGAGC
AGAAAGTATCTATGTACGAGTAGTACATGGATAGATAGATACGTAGATAG
ATGCCATACTCATGTAGCACTCCTGGAAACCTCGGCAGAAACATGTCAAG
ATTATGTCGCTTTTGATAAAAAAAAGTAGCTTTTGATCCACCAATCCATT
GTACATACGTACATACAAAAAAGTCCTTGTACACCCTTTGAGAGATAGAA
CTCAGGCGAGGTTTTGAGTGTTGCCGAACCTGTTTTTTTTTTTGCAAGTG
CGCACGCTAAATAGATTAGCCTAACGTGCCATGAGCACACTACTGCTGGT
GTGTGTCTTCTTCTCTCTCTCTCTCTTGTTCTTGTGGGTAAAGTTTTTTT
TTGTCAGCCGGGCTTGAATGTGAGCTTTGCCTGGACTGGATAGCAGCAGG
AGCAACAGCAACGACAACAACAACAATCGCCCGCACCCCCCAAACGCTGC
AACACAGAGGCACGAACGACCACAAGAGCAAGACGCGCTCAACCAAACGC
CTTGCCTTGCCTTGCCTTGTCTTGCCTTGCCTTGCCTTGCCTTGCCTTGC
CTTGTCTTGCCTTGTCTTGCCTTGTCTTGCCTTATCTGGTCTTGTCTTGT
CTTGTCTTATCTTGTCTTGCCTTATCTTGTCTTATCTTATCTTATCTTAT
CTTGCCTTATCTTGTCTTGTCTTACCTTGTCTTATCTTATCTTGCCTTAT
CTTGTCTTACCTTGTCTTGTCTTATCTTGTCTTATCGTATCTTGCCTCAT
CTTGTCTTATCTTGTCTTGTCTTGCCTTGCCTGGTCCCCTGTCGGCTCAG
GTAAGACCGTGACGATCATCAACCGGTCGGAGATCGTGGGGAGGCCACTC
GCGGCGATGCTGGCGAACGACGGCGCCACCATCTACTCCATCGACGTGGA
CTCCATCTTCGTCTTCCAGAGGGGGGCCCTCAGAAAGACGGAGGCGACCC
CGGAGGAGGCCGTGGGGCAGAGCGACGTCGTGGTCACGGTGAGAGCGACG
TTGTTTGTGGTTAAGGCGAGCGCGACGTTGTGGTCACAGTGAGAGCGACG
CTGTTTGTGGTTACGGTGAGGGCGTGTTATCTTGCGTGCCGGTCGTCGTG
TGCGCGCTCGGGGGTGCGTGTGGTTGTCATATTTATTTCCTTTTTTTTTA
TGTTTGTGTGTGTTGTGTGGCGTGCGAGCGGGTGTGTTTGATGGCTTCGC
CCCCCGCCCCCCCCCCCCCCTTGTGCTGGCGGCGGGGGTGTACCGGGAGG
CGGTAGAAAAGCCGCCTGGCTGGCAGTAGGTACTAGGCCGGGCCTTAGTA
TTGTAGGCGGGGAATAATTTTTGTTTTTTGGCTTTTCGTCCAACCGCGCC
ATGTGTGGAGGGTTGCACACACGGCGCCCCTCCCCCTCGTCTCGTCCCTT
GATCGCTGCAAGGGCCGAGCGGTTGCGGTTAGGAAGGATCAGGGGGAGTG
GTTGTGTGTATTTTCGTGGTGGTGGCGGCGGTGGTTGCTTCTACTCTGCT
GCCGTTGTGGGTAGCGTCGCTCTGCTGCTGTTGCTGCTGCTGCTGCTGCT
CTTGCTGCTGCTGCTGCTGCTGCTGCTGCTCTTGCTGCTGCTGCTGCTGC
TGCTGCTGCTGCTGCTGCTGCTACCGTTGGTGTTTACGTCTTGCTGCTGC
TGCTGCTGCTACCGTTGGTGTTTACGTCTTGCTGCTGTTCTTGCTTGTCG
CAAGGTTGCCGCAAAAGTTGCCGTGTGTCGCGCTTTTTTTTGTACGCCGC
CGATGGCGGTGGGGGGTTGTTTGCAACCACCCACCGTCTCCCGATTTCTC
TCGCCCCTCCTCCTTGCAAGTGGCATATCGCCTTAACGTGCACGTTGGGC
GTTACTCCCTCGCTCGGTTACTCACTCACTCTACGTATCTAACCGTACGT
ATGTCTCTGAACATGTCGGTTGAAAAAAAATCTCCCCCCCAACGACACCT
CCGACGCAGGGAGTGCCATCCAAGTCCTACAAGCTCTCCGCGTCGTGGCT
GAAGGAAGGGGCGGCGGTGATCAACGTCAGCACCTTCAAGAACGTCGACG
AGGAGGAGGTCCTGAAGGTGTGCGTGCGACTGACTGACTGACTGACTGGC
TGATTCCGGCGATGTTTTATGCTTTAGCCCGCATGCGCATGTATGGATGT
ATGGATGTTGCGGCCCTGTCGTAATGTTTTTTTTCTTTTTTTTCCTCCTA
TTCTTGGGGTGTTCGTCGTCTGCCCCACTGGCCTCCATACTCCGCTACGA
CTAGCTAGACGCAACTAACGACTTGCATGCATGCACACCAAGCCAAACCC
CGAGCAAAATTGCCTCGCGTTCCGAAAAGGAGAGGCAGCAAGCAGGTTTT
GTTCAGCAACACCACCGATCACCGACGAAAACGATTTCCCCGCTGAGCTG
TAGTCTTCGCTTGTCCTTGGCACCCTTTCCTTCGCCCCATCCATCGCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCTTCCCCCCCTTTTTCTCTCTTTTCTTTTTCTTTTT
TTTCTTCTTTGCTCTTTCCCGTCGCTCTCTCTTATCCTCTCTCTCTCTCC
CACGAACGCTTTTGTGTTAACTTTGCTTTCTTTGGCGAAAGATTCCGGGC
GTACGGTACGTACCCATGGTCGGCAAAGTGACGGTGGCGGTGCTGGAGAG
GAACCTGTTGCGCTTGCACGAGAACTTCGGAGAAGGTACGTGTGTGTGTG
TATGTATGTATGTTCATATATTTTTTATCTTTTCTTACCGATACCCACAC
GTCTACCAGCGCTCCGATATTTACCTCTTTCATTTGTGAGGCATGCGTGC
TCCGAAGATCTCCGAAGATGCGTTGCTGCTGGTCTTTGTGTGTGTGTGCG
TGTGTGTGTGTGTGTTTGTTGCTATCGTCGTGCGTCGTGTCGTTTGGTAG
TATAATCATACTCGTTGCGGAGTGAGCACCCGAGCTTTGAAAATCGGTCC
AGGGGGTGCGTTATCTTGTGTCGTATACGGCAGCCTCCAAGATGTGGTCG
GGGTGCTCCGTGACTGCAGGAGTTACCGCCACGCTCCACCCAACGCCACA
CCACGCATTTAGAGCTTCGTGGCAGACAGCAACACGCGTTACAACAACAA
GCGGTCTACCCCTCGCGATGTTCAAAAATGTTTGAACGTCGCAAAACGAC
ATCCTGTGTGACCCCGGTTGGGTCTTCTAGCTAAATAGTCGTAGTGGAGG
AAGGGGGCCAGTGGGGCAGACGACGAATAAGGCAGTAATGGGAGGGAAGA
CTGCAAAATAAAACAGTTCTCGTGTCGCCCGCCGCGGTGCTCACCACAAC
CACCACCACAATCAACCACCTGGGAGGAAAAAAACAAACAAAAAAAACAA
TGCAAACAAAACAGCACTCATGTCGCCCGCCGCAGTGCTCACCACAACCA
CCACCACCATCAACCACCTCCCAACAGATATGGCGGCAGAGACTCTGGTG
AAGCGAGCCAGCATCGACGCGGGCGCCCCGGCGGCGACCTCGGTGCAAGA
AAAGGCGTCCGCATAGCACAGCATCTTTGTAGCAAATCCGGCTCTCTTTT
TCTCCGATCGGGATGCCCGAGAACGAGGCGCCGAAAGATTAGAGGGTTCG
CTGGGATAGGTAGGGGGGGGGGTTATCCAGCAGTTTTTTTTCTGGCCGGG
ATGCGGTGATTTTGAAGGTGTTGCTCCGCCTCGGCTTAGCTTTTAAAGCA
GGCGGGCCCCTTTATTTTTAAAGCAGGCGGGCCCCTTTTTATTTTTAAAG
CAGGCGGGCCCCTTTATTTTTTCTCATTGTTGGCTTTAAAAGTTAAGCCA
AGGCGGAGTGGGGTATGCATATTTCTTGGGACATATTTACATACCGCACT
TTTCGCTTTGAAGCGGGGCGTGCAGGACGCGCGTTGTTTCTTGCTCGTTG
CGTCTCGGCGACAAAAGACGGGGGAAAATTGGACGAGGGATCTTGATTTG
GACCGCGGTTGTTCTTGCTGCGTGTTGTCTCGCAGCTCCACCGGCGGGAA
AGTTGGAGAGCTCTTGATTTTCTTGGCCTTGCTGGTGGCCTTCCCCCCTC
TCCGTCAATGCTGATGGGATGCGCGGGCGCGAAGTGTGTCTGCCGGTTGT
GGAAGAAGAGGAGGGGAACAAGCGAGACAAAAACAGACGGTTTTTTTTTG
TGGCGTTTTTTTTTTCTGCGGCGGTGGCACTACGGACGGGGTGTTCCAAT
CCTCTGGGGATTAATTTTGACTGGTGGAAGGAATCGCGTCAAGAGGAACA
AGCGAGATAAAAAAAGACTATTATGTTTTCTGCGGTGGTGGCACTACGGA
CGGGGTGTTCCAATCCTCTGGGGATTAAATTTTGACTGGTGGAAGGAAAC
GTGTCAAGAGGAACAAGCGAGACAAAAAAAAAACATTTTTTTTTCTGCGG
TGGTGGCACTACGGACGGGGTGTTTCAATTCTCTGGGGATTAATTTTTGA
CTCGTGGACTCGTGTCAAGAGGAACAAGCGAGAAAAAAAAACGGCTATTT
TGTTTTTCTGCGGCGGTGGCACTACGGACGGGGTGAGGTGTCCCGACCAT
CTGGGAATTAATTTTTGACTGGTGGAATCGTGTGGTAGGATACTATACCA
GTGTACACCAGTTTACGCTACTCGTCCCAACTTGTGTTTGACGGCGCTGC
CGCGAGTGGCCCGTGTGCGCAACCCTACACGTTTGTACTAAATAGGGTGC
TTCGCAGGGTGCACGTTGGGCCCGCGCATTGACCCCTTCGGTGCCTTCAC
CAGTCCGTCGAATTTTCCGCGTTATGTACAAAAGTCAGAGTCCAATTTCC
TAAACATATCTATACGAAGCAGTTGAGAGCATGAC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig6697:812..7846+ >mRNA_L-elsbetiae_contig6697.15432.1 ID=mRNA_L-elsbetiae_contig6697.15432.1|Name=mRNA_L-elsbetiae_contig6697.15432.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1488bp|location=Sequence derived from alignment at L-elsbetiae_contig6697:812..7846+ (Laminarionema elsbetiae ELsaHSoW15) ATGATCTACTATCCCGTGTTCGGGGCGTTTCCCTCCTTCTACGGCGGCAG CATGGACGACTACCTCCGGGACAGCGTCTCCATTCGCAAGGACGTGGAGG GGCTGTCCAACACCTACCGCCGAAACCTGTACCACAACGTCAGATGATCT ACTATCCCGTGTTCGGGGCGTTTCCCTCCTTCTACGGCGGCAGCATGGAC GACTACCTCCGGGACAGCGTCTCCATTCGCAAGGACGTGGAGGGGCTGTC CAACACCTACCGCCGAAACCTGTACCACAACGTCAGGTACGTGGATGAGG CCAAGACGAAGAAGTGCATCCTGCCGTGCACGCCCCTGGCCGTCGTCAAG ATCATGGAGCACGTCGGGGTCTACGACGAGAGCCTGCCGGTGGGCGACCG CCTGCAAGGTACGTGGATGAGGCCAAGACGAAGAAGTGCATCCTGCCGTG CACGCCCCTGGCCGTCGTCAAGATCATGGAGCACGTCGGGGTCTACGACG AGAGCCTGCCGGTGGGCGACCGCCTGCAAGGTAAGACCGTGACGATCATC AACCGGTCGGAGATCGTGGGGAGGCCACTCGCGGCGATGCTGGCGAACGA CGGCGCCACCATCTACTCCATCGACGTGGACTCCATCTTCGTCTTCCAGA GGGGGGCCCTCAGAAAGACGGAGGCGACCCCGGAGGAGGCCGTGGGGCAG AGCGACGTCGTGGTCACGGTAAGACCGTGACGATCATCAACCGGTCGGAG ATCGTGGGGAGGCCACTCGCGGCGATGCTGGCGAACGACGGCGCCACCAT CTACTCCATCGACGTGGACTCCATCTTCGTCTTCCAGAGGGGGGCCCTCA GAAAGACGGAGGCGACCCCGGAGGAGGCCGTGGGGCAGAGCGACGTCGTG GTCACGGGAGTGCCATCCAAGTCCTACAAGCTCTCCGCGTCGTGGCTGAA GGAAGGGGCGGCGGTGATCAACGTCAGCACCTTCAAGAACGTCGACGAGG AGGAGGTCCTGAAGGGAGTGCCATCCAAGTCCTACAAGCTCTCCGCGTCG TGGCTGAAGGAAGGGGCGGCGGTGATCAACGTCAGCACCTTCAAGAACGT CGACGAGGAGGAGGTCCTGAAGATTCCGGGCGTACGGTACGTACCCATGG TCGGCAAAGTGACGGTGGCGGTGCTGGAGAGGAACCTGTTGCGCTTGCAC GAGAACTTCGGAGAAGATTCCGGGCGTACGGTACGTACCCATGGTCGGCA AAGTGACGGTGGCGGTGCTGGAGAGGAACCTGTTGCGCTTGCACGAGAAC TTCGGAGAAGATATGGCGGCAGAGACTCTGGTGAAGCGAGCCAGCATCGA CGCGGGCGCCCCGGCGGCGACCTCGGTGCAAGAAAAGGCGTCCGCATAGA TATGGCGGCAGAGACTCTGGTGAAGCGAGCCAGCATCGACGCGGGCGCCC CGGCGGCGACCTCGGTGCAAGAAAAGGCGTCCGCATAG back to top
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