mRNA_L-elsbetiae_contig6690.15426.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6690.15426.1
Unique NamemRNA_L-elsbetiae_contig6690.15426.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6690.15426.1 vs. uniprot
Match: A0A6H5JUF7_9PHAE (GCFC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUF7_9PHAE)

HSP 1 Score: 380 bits (975), Expect = 2.950e-122
Identity = 206/249 (82.73%), Postives = 218/249 (87.55%), Query Frame = 1
Query:    1 ETDEGEDDLEGVLERFEWYRRLFDFSGDIPPPESAGYGPDEDPDQNLVPQLVEKVALPLVAERLSTAYDAMSRRQTACLVSAVSEILVYDPAEESLKTLLGAAREALQTAVRNLCIPVIGACATPSGRAAAIRLVRLQASRGLKLLRNCLAWRDLLSPESLVPLALGDLVAKRLFPALRDLAARGK-DGAAEG--GAAXXXXXXXXGAGASEALALCERAVELLPLDWMERPDASAPLASVRITVRLFG 738
            ETDEGEDDLEG LERFEWYRRLFDFS DIPPP+SAGYG DEDPDQNLVPQLVEKVALPLVAERLSTAYDAMSRRQTACLVSAVSEIL+YDP EESLKTLLG+A  ALQ AV+ +CIP+IGA +TP GRAAA+RLVR+QASRGLKLLRNCLAWRDLLSPESLVPLALGDLVAKRL PALR+L ARG   G A G   +A        GAG SEALALCERAVELLPLDWMER +ASAPLASVRIT RLFG
Sbjct:  691 ETDEGEDDLEGALERFEWYRRLFDFSEDIPPPDSAGYGADEDPDQNLVPQLVEKVALPLVAERLSTAYDAMSRRQTACLVSAVSEILIYDPTEESLKTLLGSAMRALQAAVQGVCIPLIGASSTPGGRAAAVRLVRIQASRGLKLLRNCLAWRDLLSPESLVPLALGDLVAKRLVPALRELGARGNASGTAAGISNSAGHKGAAAMGAGWSEALALCERAVELLPLDWMERTNASAPLASVRITARLFG 939          
BLAST of mRNA_L-elsbetiae_contig6690.15426.1 vs. uniprot
Match: A0A4D9D9I3_9STRA (GCFC domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9I3_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.080e-21
Identity = 66/181 (36.46%), Postives = 95/181 (52.49%), Query Frame = 1
Query:   13 GEDDLEGVLERFEWYRRLFDFS-----GDIPPPESAGYGPDEDPDQNLVPQLVEKVALPLVAERLSTAYDAMSRRQTACLVSAVSEILVYDPAEESLKTLLGAAREALQTAVRNLCIPVIGACATPSGRAAAIRLVRLQASRGLKLLRNCLAWRDLLSPESLVPLALGDLVAKRLFPALRD 540
            G+D     +E F W+ RLF++      G +P  E       EDPD  LVPQLVEKVA+  +   LS  YD  S R+T   +SA+  +L+Y+P + +L++LL A    L+ A+  LC+P++G    P    +     R Q    LKL RN   W  +L+P  L  L LG L+  +L  AL +
Sbjct:  559 GKDFGAAAIEAFPWFERLFEYGQSQEEGSVPEQEG------EDPDDRLVPQLVEKVAVSRLEGLLSECYDPFSERETQRAISAIQGLLIYEPGKHALESLLRAPFSRLEKAITKLCLPLLG----PEAGISLWEFQRRQIFVALKLFRNACFWHQVLAPRPLASLVLGVLLDGKLASALEN 729          
BLAST of mRNA_L-elsbetiae_contig6690.15426.1 vs. uniprot
Match: W7TSY7_9STRA (Gc-rich sequence dna-binding factor 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSY7_9STRA)

HSP 1 Score: 103 bits (256), Expect = 1.830e-21
Identity = 65/176 (36.93%), Postives = 94/176 (53.41%), Query Frame = 1
Query:   13 GEDDLEGVLERFEWYRRLFDFSGDIPPPESAGYGPDEDPDQNLVPQLVEKVALPLVAERLSTAYDAMSRRQTACLVSAVSEILVYDPAEESLKTLLGAAREALQTAVRNLCIPVIGACATPSGRAAAIRLVRLQASRGLKLLRNCLAWRDLLSPESLVPLALGDLVAKRLFPALRD 540
            G+D     +E F W+ RLF++ G      SA     EDPD  LVPQLVEKVA+  +   L+  YD  S R+T   +SA+  +L+Y+P + +L++LL A    L+ A+  LC+P++G    P    +     R Q    LKL RN   W  +L+P  L  L LG L+  +L  AL +
Sbjct:  397 GKDVGGAAIEAFPWFERLFEY-GQFQEEGSAPKQEGEDPDDRLVPQLVEKVAVSRLEGLLNECYDPFSERETQRAISAIQGLLIYEPGKHALESLLRAPFSRLEKAITKLCLPLLG----PEAGISLWEFQRRQIFVALKLFRNVCFWHQVLAPRPLASLVLGVLLDGKLASALEN 567          
BLAST of mRNA_L-elsbetiae_contig6690.15426.1 vs. uniprot
Match: A0A7S2S690_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S690_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 4.780e-20
Identity = 68/165 (41.21%), Postives = 88/165 (53.33%), Query Frame = 1
Query:   52 WYRRLFDFSGDIPPPESAGYGPDEDPDQNLVPQLVEKVALPLVAERLSTAYDAMSRRQTACLVSAVSEILVYDPAEESLKTLLGAAREALQTAVRNLCIPVIGACATPSGRAAAIRLVRLQASRGLKLLRNCLAWRDLLSPESLVPLALGDLVAKRLFPALRDLA 546
            W   L D+ G     E +G   D+DPD  LVP +VE   +P V   L  AYD MS RQT  LV+AV E+L +D ++  L  LL A    L+ AV  LC+P+    +T  GR    R ++ Q   G+KLL N  AW  ++    L  LAL  L A +L PALR LA
Sbjct:   14 WVGELADYGG--VGEEDSGEQKDDDPDDRLVPAMVEAAVVPQVQRLLEEAYDPMSSRQTHTLVAAVDELLDFDLSQAILPGLLRAPLNRLRAAVDALCVPLASPEST-EGR----RFMQRQLFAGVKLLGNLAAWSHIVDAHVLADLALRRLAAGQLVPALRRLA 171          
BLAST of mRNA_L-elsbetiae_contig6690.15426.1 vs. uniprot
Match: A0A1Y1HYJ4_KLENI (Transcriptional regulators binding to the GC-rich sequences n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HYJ4_KLENI)

HSP 1 Score: 97.8 bits (242), Expect = 1.460e-19
Identity = 69/182 (37.91%), Postives = 100/182 (54.95%), Query Frame = 1
Query:   13 GEDDLEGVLERFEWYRRLFDFSGDIPPPESAGYGPD-EDPDQNLVPQLVEKVALPLVAERLSTAYDAMSRRQTACLVSAVSEILVYDPAE-ESLKTLLGAAREALQTAVRNLCIPVIGACATPSGRAAAIRLVRLQASR---GLKLLRNCLAWRDLLSPESLVPLALGDLVAKRLFPALRDL 543
            GE   +GV     WY+ LF++        S G  PD +D D N+VP L+EKVALP++   ++  +D  S ++T  + +AVSE+ +Y P E E ++ LL A R  +   V  L +P      TP+  AAA + V + A      +++LRN + WRD+L P  L  LAL  LVA +L P LR L
Sbjct:  620 GEAGFDGVR----WYQELFEYGMG----NSNGAEPDPDDADANMVPTLIEKVALPILLHLITYCWDPQSTKRTVQIAAAVSEVQIYVPPESEPVRDLLSAVRSRIADVVEKLVVPAW----TPALLAAAPQAVAVSAEHFGAAVRVLRNIVLWRDILPPGDLETLALDQLVAAKLLPHLRTL 789          
BLAST of mRNA_L-elsbetiae_contig6690.15426.1 vs. uniprot
Match: A0A835YVY7_9STRA (GCFC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVY7_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 2.040e-19
Identity = 74/233 (31.76%), Postives = 107/233 (45.92%), Query Frame = 1
Query:   16 EDDLEGVLERFEWYRRLFDFSGDIPPPESAGYGPDEDPDQNLVPQLVEKVALPLVAERLSTAYDAMSRRQTACLVSAVSEILVYDPAEESLKTLLGAAREALQTAVRNLCIPVIGACATPSGRAAAIRLVRLQASRGLKLLRNCLAWRDLLSPESLVPLALGDLVAKRLFPALRDLAARGKDGAAEGGAAXXXXXXXXGAGASEALALCERAVELLPLDWMERP---DASAPL 705
            +++++ V ERF W+R LFDF+  I  P +A Y  DEDPD +LVP+L+E  A+P +A  + +AYDA S   TA LV+                         L      LC+PV+G  A   G    + L   +     +L  N  AW  + +  +LVP+A+G++ A+R  PAL  L  RG+   A              A     + + ER   L P+ W   P   DA  PL
Sbjct:  773 DEEVDTVFERFAWFRCLFDFAEGIATPAAAEYATDEDPDADLVPKLLEAAAVPQLAAAIESAYDAGSAAATAHLVAXXXXXXXXXXXXXXXXXXXXXPLPPLXXXXXALCVPVVGPLAARGG---GVALAARRLWHAARLYHNAAAWDGVAAAAALVPIAIGEVAARRAAPALERLL-RGRAPPA--------------AAVRAVVPVIERFAALTPVAWRSCPGYADAVRPL 987          
BLAST of mRNA_L-elsbetiae_contig6690.15426.1 vs. uniprot
Match: UPI0018AF1B56 (transcriptional repressor ILP1 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018AF1B56)

HSP 1 Score: 92.4 bits (228), Expect = 1.050e-17
Identity = 62/166 (37.35%), Postives = 92/166 (55.42%), Query Frame = 1
Query:   49 EWYRRLFDFSGDIPPPESAGYGPDEDPDQNLVPQLVEKVALPLVAERLSTAYDAMSRRQTACLVSAVSEILVYDPAE-ESLKTLLGAAREALQTAVRNLCIPVIGACATPSGRAAAIRLVRLQASRGLKLLRNCLAWRDLLSPESLVPLALGDLVAKRLFPALRDL 543
            +W+  LFD+     P +++ YGPD D D NL+P LVEKVALP++   ++  +D +S R+T   V A S ++ Y PA  E L+ LL   R  L  A+  L +P   A        AA +L   +    ++LLRN   W+D+L+   L  LAL DL+ K+L P +R +
Sbjct:  678 DWHELLFDYGL---PGKNSDYGPD-DADANLIPVLVEKVALPILHHEIAHCWDMLSTRRTENAVFATSLVINYIPASSEGLRELLSVVRSRLDEAIAGLSVPTWSALVMKVVPGAA-QLAAYRFGVSVRLLRNICLWKDILALPILEKLALDDLLGKKLLPHVRSI 838          
BLAST of mRNA_L-elsbetiae_contig6690.15426.1 vs. uniprot
Match: A0A7C9AF43_OPUST (GCFC domain-containing protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9AF43_OPUST)

HSP 1 Score: 90.5 bits (223), Expect = 4.790e-17
Identity = 61/167 (36.53%), Postives = 97/167 (58.08%), Query Frame = 1
Query:   52 WYRRLFDFSGDIPPPESAGYGPDEDPDQNLVPQLVEKVALPLVAERLSTAYDAMSRRQTACLVSAVSEILVYDPAE-ESLKTLLGAAREALQTAVRNLCIPVIGACATPSGRAAAIRLVRLQASRGLKLLRNCLAWRDLLSPESLVPLALGDLVAKRLFPALRDLAA 549
            W+  LFDF     P + + +GPD D D +LVP LVEKVALP++   ++  +D +S R+T   V+A S I+ Y PA  E+LK L+   R+ L  AV +L +P   A    +   AA R+   +    ++L+RN   W+D+L+   L  LAL +L+ +++ P +++L A
Sbjct:  684 WHSLLFDFGV---PEDGSEFGPD-DADADLVPSLVEKVALPILHHDIAHCWDMLSTRETKNAVAATSLIINYVPASSEALKELIATIRDRLAEAVSDLVVPTWSAVVMKAVPNAA-RMAAYRFGVAVRLMRNICMWKDVLAMPVLEKLALDELLGRKVLPHVQNLTA 845          
BLAST of mRNA_L-elsbetiae_contig6690.15426.1 vs. uniprot
Match: A0A2G5DIY3_AQUCA (GCFC domain-containing protein n=1 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5DIY3_AQUCA)

HSP 1 Score: 87.8 bits (216), Expect = 4.030e-16
Identity = 64/171 (37.43%), Postives = 94/171 (54.97%), Query Frame = 1
Query:   49 EWYRRLFDFSGDIPPPESAGYGPDEDPDQNLVPQLVEKVALPLVAERLSTAYDAMSRRQTACLVSAVSEILVYDPAE-ESLKTLLGAAREALQTAVRNLCIPVIGACATPSGRAAAIRLVRLQASR---GLKLLRNCLAWRDLLSPESLVPLALGDLVAKRLFPALRDLAA 549
            +W+  LFD+      PE+      ED D NLVP LVEK+ALP++  +++  +D +S R+T   VSA + ++ Y PA  E+L+ LL    + L  AV NL +P      TP    A     RL A R    ++LLRN   W+D+L+   L  LAL +L+A ++ P LR + A
Sbjct:  704 QWHSLLFDYGL----PENTTDLNPEDADANLVPGLVEKIALPILHHQIAQCWDMLSTRETRNAVSATNLVINYVPASSEALQELLTVINDRLADAVENLMVPAW----TPLVIKAVPNAARLAAYRFGMSIRLLRNICLWKDILALPVLEKLALDELLAGKILPHLRSVIA 866          
BLAST of mRNA_L-elsbetiae_contig6690.15426.1 vs. uniprot
Match: A0A803NDK2_CHEQI (GCFC domain-containing protein n=2 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803NDK2_CHEQI)

HSP 1 Score: 87.4 bits (215), Expect = 5.390e-16
Identity = 59/165 (35.76%), Postives = 94/165 (56.97%), Query Frame = 1
Query:   52 WYRRLFDFSGDIPPPESAGYGPDEDPDQNLVPQLVEKVALPLVAERLSTAYDAMSRRQTACLVSAVSEILVYDPAE-ESLKTLLGAAREALQTAVRNLCIPVIGACATPSGRAAAIRLVRLQASRGLKLLRNCLAWRDLLSPESLVPLALGDLVAKRLFPALRDL 543
            W+  LFD+     P + +G+ PD D D +LVP LVEKVALP++   ++  +D +S R++  +VSA + I+ Y PA  E+LK L+ A R  L  AV NL +P     A  +   AA R+   +    ++L+RN   W+D+L+   L  L L +L+  ++ P ++ L
Sbjct:  648 WHSLLFDYGV---PEDGSGFSPD-DADADLVPGLVEKVALPILHHDIAHCWDLLSSRESKNVVSATNLIIHYIPASSEALKELIAAVRTRLTEAVANLVVPTWSTVAMKAVPNAA-RVAAYRFGVAIRLMRNICMWKDILALPVLEKLVLDELLGGKILPHVQSL 807          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6690.15426.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUF7_9PHAE2.950e-12282.73GCFC domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A4D9D9I3_9STRA1.080e-2136.46GCFC domain-containing protein n=2 Tax=Monodopsida... [more]
W7TSY7_9STRA1.830e-2136.93Gc-rich sequence dna-binding factor 1 n=1 Tax=Nann... [more]
A0A7S2S690_9STRA4.780e-2041.21Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1Y1HYJ4_KLENI1.460e-1937.91Transcriptional regulators binding to the GC-rich ... [more]
A0A835YVY7_9STRA2.040e-1931.76GCFC domain-containing protein n=1 Tax=Tribonema m... [more]
UPI0018AF1B561.050e-1737.35transcriptional repressor ILP1 n=1 Tax=Dioscorea c... [more]
A0A7C9AF43_OPUST4.790e-1736.53GCFC domain-containing protein n=1 Tax=Opuntia str... [more]
A0A2G5DIY3_AQUCA4.030e-1637.43GCFC domain-containing protein n=1 Tax=Aquilegia c... [more]
A0A803NDK2_CHEQI5.390e-1635.76GCFC domain-containing protein n=2 Tax=Chenopodium... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6690contigL-elsbetiae_contig6690:7266..9072 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score389.0
Seed ortholog evalue1.6e-105
Seed eggNOG ortholog2880.D8LAU3
Preferred namePAXBP1
KEGG koko:K09061,ko:K13211,ko:K17536,ko:K20476
KEGG Pathwayko04013,map04013
Hectar predicted targeting categoryother localisation
GOsGO:0000122,GO:0000245,GO:0000375,GO:0000377,GO:0000398,GO:0000976,GO:0000977,GO:0000978,GO:0000981,GO:0000982,GO:0000987,GO:0001012,GO:0001067,GO:0001078,GO:0001227,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006355,GO:0006357,GO:0006396,GO:0006397,GO:0006417,GO:0006725,GO:0006807,GO:0007049,GO:0008134,GO:0008150,GO:0008152,GO:0008284,GO:0008380,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010638,GO:0014842,GO:0014857,GO:0016043,GO:0016070,GO:0016071,GO:0017148,GO:0019219,GO:0019222,GO:0022402,GO:0022607,GO:0022613,GO:0022618,GO:0030371,GO:0031056,GO:0031058,GO:0031060,GO:0031062,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031401,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032270,GO:0032991,GO:0033043,GO:0033044,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0042023,GO:0042127,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0043933,GO:0044085,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044786,GO:0045182,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065003,GO:0065007,GO:0070013,GO:0071008,GO:0071014,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0140110,GO:1901360,GO:1901363,GO:1901576,GO:1902275,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1905269,GO:1990837,GO:1990904,GO:2000112,GO:2000113,GO:2000288,GO:2000291,GO:2001141,GO:2001252
EggNOG free text desc.RNA polymerase II proximal promoter sequence-specific DNA binding
EggNOG OGsKOG2136@1,KOG2136@2759
COG Functional cat.EGP
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01001,ko03000,ko03041,ko04131
Exons3
Model size739
Cds size738
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6690.15426.1prot_L-elsbetiae_contig6690.15426.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6690 7266..9071 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816740.633703-CDS-L-elsbetiae_contig6690:7265..74151622816740.633703-CDS-L-elsbetiae_contig6690:7265..7415Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6690 7266..7415 +
1691683778.4626105-CDS-L-elsbetiae_contig6690:7265..74151691683778.4626105-CDS-L-elsbetiae_contig6690:7265..7415Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6690 7266..7415 +
1622816740.6461709-CDS-L-elsbetiae_contig6690:8279..84531622816740.6461709-CDS-L-elsbetiae_contig6690:8279..8453Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6690 8280..8453 +
1691683778.4766512-CDS-L-elsbetiae_contig6690:8279..84531691683778.4766512-CDS-L-elsbetiae_contig6690:8279..8453Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6690 8280..8453 +
1622816740.6571977-CDS-L-elsbetiae_contig6690:8657..90711622816740.6571977-CDS-L-elsbetiae_contig6690:8657..9071Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6690 8658..9071 +
1691683778.4864376-CDS-L-elsbetiae_contig6690:8657..90711691683778.4864376-CDS-L-elsbetiae_contig6690:8657..9071Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6690 8658..9071 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6690.15426.1

>prot_L-elsbetiae_contig6690.15426.1 ID=prot_L-elsbetiae_contig6690.15426.1|Name=mRNA_L-elsbetiae_contig6690.15426.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=246bp
ETDEGEDDLEGVLERFEWYRRLFDFSGDIPPPESAGYGPDEDPDQNLVPQ
LVEKVALPLVAERLSTAYDAMSRRQTACLVSAVSEILVYDPAEESLKTLL
GAAREALQTAVRNLCIPVIGACATPSGRAAAIRLVRLQASRGLKLLRNCL
AWRDLLSPESLVPLALGDLVAKRLFPALRDLAARGKDGAAEGGAAGGAAK
KGAGAGASEALALCERAVELLPLDWMERPDASAPLASVRITVRLFG
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mRNA from alignment at L-elsbetiae_contig6690:7266..9072+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6690.15426.1 ID=mRNA_L-elsbetiae_contig6690.15426.1|Name=mRNA_L-elsbetiae_contig6690.15426.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1807bp|location=Sequence derived from alignment at L-elsbetiae_contig6690:7266..9072+ (Laminarionema elsbetiae ELsaHSoW15)
GAGACCGACGAGGGGGAGGACGACTTGGAAGGCGTTCTGGAACGGTTTGA GTGGTACCGTCGGCTGTTCGATTTCTCTGGGGACATTCCCCCGCCGGAGA GTGCGGGCTACGGCCCCGATGAAGACCCAGATCAAAACCTCGTGCCCCAG GTGCGCCATATGTCGTGATCACGATGTTGTCGAGCCTCTTTTTGTGCTGA ACGGCAGACGGAGAACCTGATGCTTCGGTATGTTCATCAGTGCTGTCCCT GTTTTGGTCGTGAAACCACTCAACCAAACGCTTTGATTTCGGAGGGGACC CCGGCTCCGCCGTTTCTCTACTCAGTGCCTGTGACACGTCTCTGACGGTA TTCAACTGACATACTGATGTGCGGGTTGGATTATGAGCTGTGGTGACACC AGCCACGTGTGGATCATCGCCTTTGCCATCCTCTTTTTGTCGCACGCCAT AGTCTTCTTACCGTTTGTCTCTTCGCTGGAATCGCCGGAGTGCAACCGCT GTGAGAGCCGTATTTCCCTTTTTTCGAAATTCGAGCACACTCGCAGCAAT CCCGCTTCCCGTGTGTTCAGATAGCAGCAGCACGCAGCTACACCCATTGT TGCAATCGCTTCCAATGAAGCGGGGGCGCGAAGCGCCCACAGCCTTGTTG TTTGCTGAGGCGACTACACTACATAAGTGACATATCCCCCGCCTGCTGTT CGGCCCCGTGGCGCCGTGTACTTTTCATTGTGGAAACAAGCTCGCTCTTA ATGTTGGCTGCTGCGTGCTTAAGACAGATCCATACATATACCTTTGCGCA CAACCGTTTCTAAACACCATGAAAATAATGTACGCACGGGCATTTTGGTT CTCCTGGATCATGCGTGTACGGGTTTTTGCCGCTACCCCAGGTTTAAGTC AACCCTGTTTCGGCCAACGCATGCCTCCCCCAACTCATTTTCGCTGGGTC ACCTTCATCGTCGTTTTGTTGAACCCGCACGTCGTGCCTTTCTCCTGCTT CGCATGCTTCGCAGCTGGTGGAAAAGGTTGCTCTTCCCCTCGTGGCAGAG CGGCTCTCCACAGCGTACGATGCGATGTCCCGGCGACAAACGGCCTGCCT AGTTTCGGCCGTCTCAGAGATCCTGGTGTACGATCCCGCCGAGGAGTCGC TCAAGACCCTGCTGGGAGCGGCGCGCGAGGCCCTGCAGGTGTGTTTGTTG TTGTTTTCGCCGAAGCTGATATGTAGGAACTCTGGCTCGACAACGAAGGC ACAAAGTGTGTGCGAAGAGCGAGAGCAGCGTCGTGAGAAGCAGATTCACT GGGTGAAAGTCGTCGGGAAGCAGCAGATGCGATGTACTGCCCCTTTCTAA AAACGGATCGCCGTGCTCCCCCCCCCCCCCCCCATCGAACAGACCGCTGT ACGAAATCTCTGCATCCCGGTGATTGGCGCGTGCGCCACCCCGAGCGGCC GAGCGGCTGCCATCCGACTCGTCCGCCTCCAGGCCTCGAGGGGCCTAAAG CTGCTCCGGAACTGCCTGGCCTGGAGGGACCTCCTCTCGCCCGAGTCCCT CGTGCCCCTCGCCCTGGGTGACCTTGTCGCCAAGAGGCTGTTCCCAGCGC TGAGGGACCTAGCCGCGCGCGGGAAGGACGGCGCGGCCGAAGGCGGCGCC GCGGGCGGCGCAGCGAAAAAGGGGGCGGGGGCGGGGGCGAGCGAGGCCCT TGCCCTGTGTGAGAGGGCGGTGGAGCTGCTGCCGCTTGATTGGATGGAAC GGCCGGATGCATCGGCGCCGTTGGCGTCCGTGAGAATAACCGTGCGGCTG TTTGGGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6690:7266..9072+

>mRNA_L-elsbetiae_contig6690.15426.1 ID=mRNA_L-elsbetiae_contig6690.15426.1|Name=mRNA_L-elsbetiae_contig6690.15426.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1476bp|location=Sequence derived from alignment at L-elsbetiae_contig6690:7266..9072+ (Laminarionema elsbetiae ELsaHSoW15)
GAGACCGACGAGGGGGAGGACGACTTGGAAGGCGTTCTGGAACGGTTTGA
GTGGTACCGTCGGCTGTTCGATTTCTCTGGGGACATTCCCCCGCCGGAGA
GTGCGGGCTACGGCCCCGATGAAGACCCAGATCAAAACCTCGTGCCCCAG
GAGACCGACGAGGGGGAGGACGACTTGGAAGGCGTTCTGGAACGGTTTGA
GTGGTACCGTCGGCTGTTCGATTTCTCTGGGGACATTCCCCCGCCGGAGA
GTGCGGGCTACGGCCCCGATGAAGACCCAGATCAAAACCTCGTGCCCCAG
CTGGTGGAAAAGGTTGCTCTTCCCCTCGTGGCAGAGCGGCTCTCCACAGC
GTACGATGCGATGTCCCGGCGACAAACGGCCTGCCTAGTTTCGGCCGTCT
CAGAGATCCTGGTGTACGATCCCGCCGAGGAGTCGCTCAAGACCCTGCTG
GGAGCGGCGCGCGAGGCCCTGCAGCTGGTGGAAAAGGTTGCTCTTCCCCT
CGTGGCAGAGCGGCTCTCCACAGCGTACGATGCGATGTCCCGGCGACAAA
CGGCCTGCCTAGTTTCGGCCGTCTCAGAGATCCTGGTGTACGATCCCGCC
GAGGAGTCGCTCAAGACCCTGCTGGGAGCGGCGCGCGAGGCCCTGCAGAC
CGCTGTACGAAATCTCTGCATCCCGGTGATTGGCGCGTGCGCCACCCCGA
GCGGCCGAGCGGCTGCCATCCGACTCGTCCGCCTCCAGGCCTCGAGGGGC
CTAAAGCTGCTCCGGAACTGCCTGGCCTGGAGGGACCTCCTCTCGCCCGA
GTCCCTCGTGCCCCTCGCCCTGGGTGACCTTGTCGCCAAGAGGCTGTTCC
CAGCGCTGAGGGACCTAGCCGCGCGCGGGAAGGACGGCGCGGCCGAAGGC
GGCGCCGCGGGCGGCGCAGCGAAAAAGGGGGCGGGGGCGGGGGCGAGCGA
GGCCCTTGCCCTGTGTGAGAGGGCGGTGGAGCTGCTGCCGCTTGATTGGA
TGGAACGGCCGGATGCATCGGCGCCGTTGGCGTCCGTGAGAATAACCGTG
CGGCTGTTTGGGACCGCTGTACGAAATCTCTGCATCCCGGTGATTGGCGC
GTGCGCCACCCCGAGCGGCCGAGCGGCTGCCATCCGACTCGTCCGCCTCC
AGGCCTCGAGGGGCCTAAAGCTGCTCCGGAACTGCCTGGCCTGGAGGGAC
CTCCTCTCGCCCGAGTCCCTCGTGCCCCTCGCCCTGGGTGACCTTGTCGC
CAAGAGGCTGTTCCCAGCGCTGAGGGACCTAGCCGCGCGCGGGAAGGACG
GCGCGGCCGAAGGCGGCGCCGCGGGCGGCGCAGCGAAAAAGGGGGCGGGG
GCGGGGGCGAGCGAGGCCCTTGCCCTGTGTGAGAGGGCGGTGGAGCTGCT
GCCGCTTGATTGGATGGAACGGCCGGATGCATCGGCGCCGTTGGCGTCCG
TGAGAATAACCGTGCGGCTGTTTGGG
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