mRNA_L-elsbetiae_contig669.15423.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig669.15423.1
Unique NamemRNA_L-elsbetiae_contig669.15423.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig669.15423.1 vs. uniprot
Match: D8LGN4_ECTSI (Uncharacterized protein n=5 Tax=Eukaryota TaxID=2759 RepID=D8LGN4_ECTSI)

HSP 1 Score: 284 bits (727), Expect = 6.550e-93
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 3 
Query:   48 MSKRGRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSIV 467
            MSKRGRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSIV
Sbjct:    1 MSKRGRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSIV 140
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BLAST of mRNA_L-elsbetiae_contig669.15423.1 vs. uniprot
Match: F0WHX9_9STRA (60S ribosomal protein L23 putative n=3 Tax=Oomycota TaxID=4762 RepID=F0WHX9_9STRA)

HSP 1 Score: 248 bits (634), Expect = 7.630e-79
Identity = 118/141 (83.69%), Postives = 130/141 (92.20%), Query Frame = 3 
Query:   45 IMSKRGRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSIV 467
            + SKRGR GA GNK RM LGLPVAAV NC DNSGA+NLYII+VCGIKGRLNRLP+AGVGDMV+ATV+KGKP+LRKKVMPAV++RQRK+WRR+DGVF+YFEDN GVIVN KGEMKGSAI GPV KECADLWPRIASNAGSIV
Sbjct:    1 MSSKRGRGGASGNKLRMALGLPVAAVANCADNSGARNLYIIAVCGIKGRLNRLPAAGVGDMVLATVKKGKPDLRKKVMPAVIIRQRKSWRRRDGVFLYFEDNAGVIVNPKGEMKGSAITGPVGKECADLWPRIASNAGSIV 141
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BLAST of mRNA_L-elsbetiae_contig669.15423.1 vs. uniprot
Match: A0A1Y1Y5E8_9FUNG (Ribosomal protein L14b/L23e n=8 Tax=Zoopagomycota TaxID=1913638 RepID=A0A1Y1Y5E8_9FUNG)

HSP 1 Score: 246 bits (628), Expect = 5.930e-78
Identity = 117/140 (83.57%), Postives = 131/140 (93.57%), Query Frame = 3 
Query:   48 MSKRGRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSIV 467
            MSKRGR GA GNK+RM+LGLPV AV+NC DNSGAKNLYII+V GIKGRLNRLP+AGVGDMVMATV+KGKP+LRKKVMPAVV+RQRKAWRR+DGVF+YFEDN GVIVN KGEMKGSAI GPV KECADLWPRIAS++G++V
Sbjct:    1 MSKRGRGGAAGNKFRMSLGLPVGAVINCADNSGAKNLYIIAVTGIKGRLNRLPAAGVGDMVMATVKKGKPDLRKKVMPAVVIRQRKAWRRRDGVFLYFEDNAGVIVNPKGEMKGSAITGPVGKECADLWPRIASSSGTVV 140
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BLAST of mRNA_L-elsbetiae_contig669.15423.1 vs. uniprot
Match: M4TPD7_9METZ (60S ribosomal protein L23 n=10 Tax=Eumetazoa TaxID=6072 RepID=M4TPD7_9METZ)

HSP 1 Score: 246 bits (628), Expect = 5.930e-78
Identity = 119/139 (85.61%), Postives = 131/139 (94.24%), Query Frame = 3 
Query:   48 MSKRGRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSI 464
            MSKRGR G+ G+K+R++LGLPV AVMNC DN+GAKNLYIISV GIKGRLNR+PSAG+GD+V+ATV+KGKPELRKKVMPAVVVRQRK +RRKDGVFIYFEDN GVIVNNKGEMKGSAI GPVAKECADLWPRIASNAGSI
Sbjct:    1 MSKRGRGGSSGSKFRISLGLPVGAVMNCADNTGAKNLYIISVKGIKGRLNRMPSAGIGDLVLATVKKGKPELRKKVMPAVVVRQRKPYRRKDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
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BLAST of mRNA_L-elsbetiae_contig669.15423.1 vs. uniprot
Match: A0A0N8BNL5_9CRUS (60S ribosomal protein L23 n=27 Tax=Eukaryota TaxID=2759 RepID=A0A0N8BNL5_9CRUS)

HSP 1 Score: 246 bits (627), Expect = 8.680e-78
Identity = 116/136 (85.29%), Postives = 127/136 (93.38%), Query Frame = 3 
Query:   60 GRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSIV 467
            GR G  GNKYR+TLGLPV AVMNC DNSGAKNLYII+VCGIKGRLNRLP+AG+GDMV+ATV+KGKP+LRKKVMPA+V+RQR+AWRRKDGVFIYFEDN GVIVN KGEMKGSAI GPV KECAD+WPRIASNAGSIV
Sbjct:    6 GRGGLTGNKYRITLGLPVGAVMNCADNSGAKNLYIIAVCGIKGRLNRLPAAGLGDMVLATVKKGKPDLRKKVMPAIVIRQRRAWRRKDGVFIYFEDNAGVIVNPKGEMKGSAITGPVGKECADIWPRIASNAGSIV 141
[Close]
BLAST of mRNA_L-elsbetiae_contig669.15423.1 vs. uniprot
Match: A0A1D1YVF2_9ARAE (60S ribosomal protein L23 n=7 Tax=Eukaryota TaxID=2759 RepID=A0A1D1YVF2_9ARAE)

HSP 1 Score: 245 bits (626), Expect = 1.190e-77
Identity = 117/140 (83.57%), Postives = 129/140 (92.14%), Query Frame = 3 
Query:   48 MSKRGRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSIV 467
            MSKRGR GA GNK+RMTLGLPV A+MNC DNSGAKNLYIISV GI GRLNRLP+AGVGDMVMATV+KG+P+LRKKVMPAVV+RQRK WRRKDGVF+YFEDN GVIVN KGEMKGSAI GPV KECADLWPRIAS++G++V
Sbjct:    1 MSKRGRGGASGNKFRMTLGLPVGAIMNCADNSGAKNLYIISVKGIHGRLNRLPAAGVGDMVMATVKKGRPDLRKKVMPAVVIRQRKPWRRKDGVFLYFEDNAGVIVNPKGEMKGSAITGPVGKECADLWPRIASSSGTVV 140
[Close]
BLAST of mRNA_L-elsbetiae_contig669.15423.1 vs. uniprot
Match: A0A0L0HBL9_SPIPD (60S ribosomal protein L23 n=5 Tax=Fungi incertae sedis TaxID=112252 RepID=A0A0L0HBL9_SPIPD)

HSP 1 Score: 244 bits (624), Expect = 2.380e-77
Identity = 115/140 (82.14%), Postives = 131/140 (93.57%), Query Frame = 3 
Query:   48 MSKRGRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSIV 467
            MSKRGR+GA GNK+RMTLGLPV AVMNC DNSGAKNLYIISV GIKGRLNRLP+AGVGDMV+ATV+KGKP+LRKKVMPAVV+RQRK WRR+DG+++YFEDN GVIVN KGEMKGSAI GPV KECADLWP+IAS++G++V
Sbjct:    1 MSKRGRSGASGNKFRMTLGLPVGAVMNCADNSGAKNLYIISVKGIKGRLNRLPAAGVGDMVLATVKKGKPDLRKKVMPAVVIRQRKPWRRRDGIYLYFEDNAGVIVNPKGEMKGSAITGPVGKECADLWPKIASSSGTVV 140
[Close]
BLAST of mRNA_L-elsbetiae_contig669.15423.1 vs. uniprot
Match: A0A8C4AJW6_9TELE (60S ribosomal protein L23 n=2 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C4AJW6_9TELE)

HSP 1 Score: 246 bits (628), Expect = 4.310e-77
Identity = 122/155 (78.71%), Postives = 137/155 (88.39%), Query Frame = 3 
Query:   15 VSDYPSLPYPI-----MSKRGRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSI 464
            +S  PSL  P+     MSKRGR G+ G K+R++LGLPV AV+NC DN+GAKNLYIISV GIKGRLNRLP+AGVGDMVMATV+KGKPELRKKV PAVV+RQRK++RRKDG+F+YFEDN GVIVNNKGEMKGSAI GPVAKECADLWPRIASNAGSI
Sbjct:   44 ISQRPSLLLPLSPSAAMSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGIFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 198
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BLAST of mRNA_L-elsbetiae_contig669.15423.1 vs. uniprot
Match: RL23_DANRE (60S ribosomal protein L23 n=15 Tax=Bilateria TaxID=33213 RepID=RL23_DANRE)

HSP 1 Score: 244 bits (622), Expect = 4.760e-77
Identity = 119/139 (85.61%), Postives = 130/139 (93.53%), Query Frame = 3 
Query:   48 MSKRGRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSI 464
            MSKRGR G+ G K+R++LGLPV AV+NC DN+GAKNLYIISV GIKGRLNRLPSAGVGDMVMATV+KGKPELRKKV PAVV+RQRK++RRKDGVF+YFEDN GVIVNNKGEMKGSAI GPVAKECADLWPRIASNAGSI
Sbjct:    1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPSAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
[Close]
BLAST of mRNA_L-elsbetiae_contig669.15423.1 vs. uniprot
Match: A0A7J6BDH5_AMEME (60S ribosomal protein L23 n=1 Tax=Ameiurus melas TaxID=219545 RepID=A0A7J6BDH5_AMEME)

HSP 1 Score: 245 bits (626), Expect = 8.610e-77
Identity = 121/155 (78.06%), Postives = 137/155 (88.39%), Query Frame = 3 
Query:   24 YPSLPYPI--------MSKRGRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLNRLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFEDNGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSI 464
            +PS+P+ +        MSKRGR G+ G K+R++LGLPV AV+NC DN+GAKNLYIISV GIKGRLNRLP+AGVGDMVMATV+KGKPELRKKV PAVV+RQRK++RRKDGVF+YFEDN GVIVNNKGEMKGSAI GPVAKECADLWPRIASNAGSI
Sbjct:   44 FPSVPFSLLPLTLPAAMSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 198
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig669.15423.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGN4_ECTSI6.550e-93100.00Uncharacterized protein n=5 Tax=Eukaryota TaxID=27... [more]
F0WHX9_9STRA7.630e-7983.6960S ribosomal protein L23 putative n=3 Tax=Oomycot... [more]
A0A1Y1Y5E8_9FUNG5.930e-7883.57Ribosomal protein L14b/L23e n=8 Tax=Zoopagomycota ... [more]
M4TPD7_9METZ5.930e-7885.6160S ribosomal protein L23 n=10 Tax=Eumetazoa TaxID... [more]
A0A0N8BNL5_9CRUS8.680e-7885.2960S ribosomal protein L23 n=27 Tax=Eukaryota TaxID... [more]
A0A1D1YVF2_9ARAE1.190e-7783.5760S ribosomal protein L23 n=7 Tax=Eukaryota TaxID=... [more]
A0A0L0HBL9_SPIPD2.380e-7782.1460S ribosomal protein L23 n=5 Tax=Fungi incertae s... [more]
A0A8C4AJW6_9TELE4.310e-7778.7160S ribosomal protein L23 n=2 Tax=Denticeps clupeo... [more]
RL23_DANRE4.760e-7785.6160S ribosomal protein L23 n=15 Tax=Bilateria TaxID... [more]
A0A7J6BDH5_AMEME8.610e-7778.0660S ribosomal protein L23 n=1 Tax=Ameiurus melas T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig669contigL-elsbetiae_contig669:21062..25778 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score283.1
Seed ortholog evalue7.1e-74
Seed eggNOG ortholog2880.D8LGN4
Preferred nameRPL23
KEGG koko:K02894
KEGG Pathwayko03010,map03010
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
GOsGO:0000122,GO:0000184,GO:0000956,GO:0001221,GO:0001223,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005783,GO:0005789,GO:0005791,GO:0005829,GO:0005840,GO:0006139,GO:0006355,GO:0006357,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006606,GO:0006610,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0008092,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008284,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009719,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010243,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010948,GO:0012505,GO:0015031,GO:0015833,GO:0015934,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0017022,GO:0017038,GO:0019219,GO:0019222,GO:0019439,GO:0019538,GO:0019843,GO:0019899,GO:0022411,GO:0022625,GO:0022626,GO:0023051,GO:0023056,GO:0030162,GO:0030234,GO:0030867,GO:0031090,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031330,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031625,GO:0031647,GO:0031974,GO:0031981,GO:0031984,GO:0032268,GO:0032269,GO:0032984,GO:0032986,GO:0032991,GO:0033036,GO:0033365,GO:0034504,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0042127,GO:0042175,GO:0042176,GO:0042177,GO:0042221,GO:0042886,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0043933,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044389,GO:0044391,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0045786,GO:0045787,GO:0045861,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0046677,GO:0046700,GO:0046907,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050789,GO:0050790,GO:0050794,GO:0050821,GO:0050896,GO:0051169,GO:0051170,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051338,GO:0051348,GO:0051438,GO:0051444,GO:0051641,GO:0051649,GO:0051716,GO:0051726,GO:0055105,GO:0055106,GO:0060255,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070180,GO:0070727,GO:0070887,GO:0070972,GO:0071156,GO:0071157,GO:0071158,GO:0071236,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071824,GO:0071840,GO:0072594,GO:0072599,GO:0072657,GO:0072716,GO:0072717,GO:0080090,GO:0090068,GO:0090150,GO:0090304,GO:0097159,GO:0098552,GO:0098554,GO:0098556,GO:0098562,GO:0098588,GO:0098772,GO:0098827,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901796,GO:1901798,GO:1902531,GO:1902533,GO:1902679,GO:1902680,GO:1903050,GO:1903051,GO:1903320,GO:1903321,GO:1903362,GO:1903363,GO:1903506,GO:1903507,GO:1903508,GO:1904666,GO:1904667,GO:1990904,GO:1990948,GO:2000058,GO:2000059,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.large ribosomal subunit rRNA binding
EggNOG OGsCOG0093@1,KOG0901@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Ec32 ortholog descriptionRibosomal protein L14b/L23e
Ec32 orthologEc-10_002900.1
Exons5
Model size1221
Cds size423
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816740.4096832-UTR-L-elsbetiae_contig669:21061..211081622816740.4096832-UTR-L-elsbetiae_contig669:21061..21108Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig669 21062..21108 +
1691683778.3277912-UTR-L-elsbetiae_contig669:21061..211081691683778.3277912-UTR-L-elsbetiae_contig669:21061..21108Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig669 21062..21108 +
1622816740.4983203-UTR-L-elsbetiae_contig669:25027..257781622816740.4983203-UTR-L-elsbetiae_contig669:25027..25778Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig669 25028..25778 +
1691683778.402479-UTR-L-elsbetiae_contig669:25027..257781691683778.402479-UTR-L-elsbetiae_contig669:25027..25778Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig669 25028..25778 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816740.4229453-CDS-L-elsbetiae_contig669:21108..211211622816740.4229453-CDS-L-elsbetiae_contig669:21108..21121Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig669 21109..21121 +
1691683778.3467872-CDS-L-elsbetiae_contig669:21108..211211691683778.3467872-CDS-L-elsbetiae_contig669:21108..21121Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig669 21109..21121 +
1622816740.4416542-CDS-L-elsbetiae_contig669:22711..228641622816740.4416542-CDS-L-elsbetiae_contig669:22711..22864Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig669 22712..22864 +
1691683778.356989-CDS-L-elsbetiae_contig669:22711..228641691683778.356989-CDS-L-elsbetiae_contig669:22711..22864Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig669 22712..22864 +
1622816740.457649-CDS-L-elsbetiae_contig669:23381..234411622816740.457649-CDS-L-elsbetiae_contig669:23381..23441Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig669 23382..23441 +
1691683778.3669164-CDS-L-elsbetiae_contig669:23381..234411691683778.3669164-CDS-L-elsbetiae_contig669:23381..23441Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig669 23382..23441 +
1622816740.469419-CDS-L-elsbetiae_contig669:24248..243621622816740.469419-CDS-L-elsbetiae_contig669:24248..24362Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig669 24249..24362 +
1691683778.3772483-CDS-L-elsbetiae_contig669:24248..243621691683778.3772483-CDS-L-elsbetiae_contig669:24248..24362Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig669 24249..24362 +
1622816740.484887-CDS-L-elsbetiae_contig669:24944..250271622816740.484887-CDS-L-elsbetiae_contig669:24944..25027Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig669 24945..25027 +
1691683778.39126-CDS-L-elsbetiae_contig669:24944..250271691683778.39126-CDS-L-elsbetiae_contig669:24944..25027Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig669 24945..25027 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig669.15423.1prot_L-elsbetiae_contig669.15423.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig669 21109..25027 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig669.15423.1

>prot_L-elsbetiae_contig669.15423.1 ID=prot_L-elsbetiae_contig669.15423.1|Name=mRNA_L-elsbetiae_contig669.15423.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=141bp
MSKRGRAGAQGNKYRMTLGLPVAAVMNCCDNSGAKNLYIISVCGIKGRLN
RLPSAGVGDMVMATVRKGKPELRKKVMPAVVVRQRKAWRRKDGVFIYFED
NGGVIVNNKGEMKGSAINGPVAKECADLWPRIASNAGSIV*
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mRNA from alignment at L-elsbetiae_contig669:21062..25778+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig669.15423.1 ID=mRNA_L-elsbetiae_contig669.15423.1|Name=mRNA_L-elsbetiae_contig669.15423.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4717bp|location=Sequence derived from alignment at L-elsbetiae_contig669:21062..25778+ (Laminarionema elsbetiae ELsaHSoW15)
CCCCCTCTTCTTAGGTCTCGGACTACCCCAGCCTACCCTATCCCATCATG
TCCAAGCGTGGTGAGTGGCCTTCGATGTCGTAACCGTGCTTCCTGATGCC
CCCCGATGCGTGTGCGGTTTTTGTGTGGTGTTTTCTCTCGCTCTCCGGGC
TTTGTGTGGTGTGCGGCGGATATCAAGGCCTCGCCTCTCACAGACAAGAA
CTGCGATGTCTGCATAAAGCACAGGCAGTGGGATGGCACCGGGCATTTCT
TCCTCTCTGATTTTTGGAAGCGCCTTGGTGTAGCTAGTAAAGGAGCCAAG
TGTCGCCGTAGGCCTTCCCCTCTGGTTGTGCACACCTATCCTCATCTCTT
CCACTCCAGGTCGCCCGACCCTTTTTTACGTGGCTCGGCTTTGTCCCGGT
AGACAAACGCTCCCCGCTTACACATAGCAGCAGCGACCGTAGGGATGCAT
TAGCTTGGACACGGTGGAAGTAGAGTATATTTTCTGCTGCCAGGAGCGAA
ATAAGCCACACACGCCATCAATACGCGATTGTGTAGCCCCGCTCTGTCTC
CTACGTCGCAAAAAAAGACAGCTACAAGTACAAGTAGTCTGCTGATAGGT
ACATAATAGGATACCAGGGTTGAGTTGCAGCAGTTGCGCGTGCAGTAATG
AAAAAGGAATTTCACTCGTGACTCTCCGAGCACGTAGCGACGTGCTGACC
GGCTTGCTGGTGCTACCGTTGCTGTCGGTAGCGCCCCCAGCAGCTCCTTC
GTGGCTAATTATCGTGAAAAAAATGCGATATGCCACCAACACTTTCAACA
TCTTGTGTGTGTGGAGTCGAGAGTCGAGAGAACCACTTGCACGACGAAGA
GACGCACTTAGTACGGCAGAAGTCGAGTGCCTGGGACTGCTGCGGGTTGG
GTGGGGAAAGAGTCGGCAGGTCATAACACTGCCGTGTACAGACTTGGTCT
GTAGTTACTCTCTTTAATCCAAAAGCTTCAAAGCTCGCGGGACCCGAGAC
GAGGGGCGAACGTCGCGGCATAGGCGCCCCCCCCCCCCCATGTCTCGCAG
CAACCCTTCGGCCGTCTCTGCCTAAGCACGCTGGTTCTGGATCATGACAC
GGATATATCAAGAGATTATTCGTTTGTGAAAGGCTCTCAGTTTTGTGGCG
GAATAGACGCTTCTTCCTTGTGGCGCTGCTCGATCTTTTTTTTGGCTTGT
GTGCCGCCGCCCCCTGCACACCCCCTATATGAGTGTGGGCTCACGGTGCT
CCATCATTGTACTATAGTCAAATCAAGCCACACACCCCCAACACACACCA
ACAGCATCTCGCCTCATCTTTCCTGTCCCATTTCATCCCCCTCTCCGTAA
CGCCTCCACCACTGGCTGGTGTTTGTCCTCGCCTCCGTCGTCCTACCCCT
GCTGCTGGTGTTGCCACGCGCCCGTACCCTCCCGTCTTGAAAAGGGCAAC
AAAGACTGCGAGTATCTACATAGCACTAGCCTGAGTTGAGTGCCCCTCCC
CTCCCCTTGCTGTTTTTCGCGGCTTTCTCCCTACGACGAGGACTCAGACG
CATGCGGTCTCCTCACGATTCCTTGTCTCACTCCTGCCCCTCGTTGACAC
CACCATCACCCCCGTTCTATTTCTACCGCGTCGCCGTCTTGTCTCCGCAG
GGCGCGCCGGTGCCCAGGGCAACAAGTACCGCATGACCCTCGGTCTGCCC
GTGGCCGCGGTGATGAACTGCTGCGACAACAGCGGGGCCAAGAACCTGTA
CATCATCTCGGTGTGCGGGATCAAGGGTCGCCTGAACCGCCTGCCGTCTG
CCGGTAGGAGACCGCCGTCGTTTTTAGTGCTTCTGCTGCTGAGGCTCTTG
TTGCTGTTGACGTTGTGTCCTTCTAATGAGGCGAGATGGGGTGCGGTCGG
CCCGATCGATTTTTATCGGACCCTTCGGTCACAAAAATATGGAAATACAT
TATCCCCCGTTGCTGACGAGTCGCGCTCACGGCCGGCCCTGCTGCCCTTC
TCGGGCGGTTGCACCATGTCGACGACCCCGATCAGAAGATCGCCTTCTCC
GCGCTCTCCCGTCGGTCTCTGGTTGTTGGAACGACCCCCAAAGCCTTTTA
AATGTCTTTACTTGTGAGGTGTAGGCAATTGGGAACTGTTGTTAATCGTG
CACCGCCCCCCACATACGGTACGAGGGTCCTGCCGCCGATAAATGACGCA
TGTACGAACTGTCGGCGACGGAGATCAGGGAACAGCGGGATGTGCGCGCA
AGCGCAAACCTTTTACATTTGTTTTCCGTCGGTCTTGTTTTTCGCCTCTT
GCCCGTCTTGGAAAACGCAGGTGTCGGTGACATGGTCATGGCCACCGTCC
GCAAGGGAAAGCCGGAGCTCAGGAAGAAGGGTAAGCGAGATTTAAAAAAC
TTTTTTTTTATTTTCCTATGTACACGCACCCGCCGCTCTTTGACAGAAAA
GTGTCCTCCCGACCACACCGAGCGGTGACGCGAGCAAGGCATCACCTTCA
GTTGTCGACCCATCTGACTACATACAATCGCACCACAAGGCCGTCCATGT
TTCGATTGAAAAAACGGCGATACATCAGAGACGAAACGCCCGCCGAAAAA
AACCCTTCTCATATGAGGCGAAAAAAACTGAAGTTTGTACCTACACATGA
CGGTAAGAGGTATGTCAACATTTCCCCACTAGACCCCTCACCGTTCGACA
CGCCGACCAAAGGTTGTTGTCGTCTGGCGCCTTTTTTTTTCTCACGGATA
CCCACACGTTTACCAGCGCTCGGGCGAAGGTCCGAACAATTTTTGAGGCA
GCGCACCGTAGTAGCCGCAGTGGTATGTTTTTTCGTTTTACCAGTGTGCT
GCTTTGTCTTATCCTGGACACTGGTACAGTGATGGCTCCCCTGCTATTGT
CAGCAGGCTCAACAAAAATTTAGCTAAAGATGATAGCATCGGTGTTTAGT
GGACGTACACCTTTTTCTAGGGGGGTAAAGACTTGGCCTTGGAACAGACC
GTGCCGTGTCGTGAGTGGCCCCCAAGTTCTCGTTTGGTCGTTTGTGTGTA
GCCCCCGCCCCCGCCAGATGCGGTCTGTGCAGGTGGCGATGAAGTGTGGT
GGGTTTGCACCCCCTCCCTCCCTCCCTCCTGGCCACCCGCACTCCACTCT
CATCTCCCCACCCAATCTATCGCCCCCCCCTCTGCAGTGATGCCTGCCGT
GGTGGTGAGGCAGCGCAAGGCCTGGAGGCGGAAGGACGGTGTCTTCATCT
ACTTCGAGGACAACGGCGGCGTCATTGTGAACAACAAGGGCGAGATGAAG
GGTGAGTTGCCGTTGGTTGCCTCGAACACGTGAAGTGGCAACGCTGCCCT
GCGCACTCAATCCCTCGGCACTTGCCACCTAAATAACTCCATCTATGTAC
GTACGTACTCCGAAGTTTGATGTATGTATTTATGTTGTGCGGGCATATTT
TGGTGTCAACGAGAGGGCGGGATGGGCTCTGCCTCCATCTGTAGGTGTTA
TTCTGGTTTTTCGCCGCGTTTCCCGCCTGTTTACCGGCTTGCGTGGGAGA
GCTCTCGGAGGAAGTCTTGCAGCGGTAGGTAGTGTTCACCGTGTACGTAC
GCCGTACATCTCTTTCCGGCCTTTCCGATTTGTGCGCGTGTGTCGGTATC
CTCTGTTGTGGTGCGGCGGATGATTGCACCCCCCCGGCCTTAAGCTGCCG
TGTTCCATTTCAAACCATTTTTATAGATCAAAACCGCTGGCTTGCAAATG
GCATTTGACCGGAACTTGAGCCATCTTCCAAACAGATATTCGCATATATT
TGTGTATACATACAACAAACACGCCACACGTCTCTCTAAACCCGCTTCGC
TTCGCTTCGAACCTGTGTCTTCTGTTGTTTCAGGTTCGGCCATCAACGGC
CCCGTCGCCAAGGAGTGCGCTGACCTGTGGCCCCGTATTGCCAGCAACGC
CGGCTCCATCGTTTAAGAAGCATAAACAGCACAGGGGGCACGGGACCGAA
GAGGCGTTTTTGCTCCCCCCCAATAAATTGTGTCAAACCCTTCCTTTTCG
TTTTGAGAAGCGAGATGGGGAGAGGGGGGGGCGGCGGCGTATCCAAAACT
CTCGAGGGCTTTCCTCTGTTTTCACGCCGGCCGCGCTCCTCGTAGAGCTG
TAGCGCAGGCGTGTGGATAGAGATCAGCGTTCTTGGTTGTGCAGAGAGCT
TGTTTCGCCTGCTCCCTGCGCGCTGTTTCGGCAGAGAGAGGGGATGGTCA
CGTGGTGGTTTATTGGCGGGGTTTCGTTCTTGCGCTTAAGAATACGCTTT
TGGTCTCTTTTGGTGTCGGAACAAGAGTTTTTTTTTTTTGTTGAGAAGCA
AAAACGAAAAATGGCGAAAACAAATAGAAAGGCGCTGTCAATGTGGATCC
ACCGAAGTTCGGTATGTTTTGCCGATTCGGGGTGAATTTTGCGTCCTACG
GGGGCCTTTTGCCGGCGACGGTGGCGGCCTTTCTAGGCACCGAGACACAG
GACCACCTTGGTGCCGGCGTGTTCACTCTTTACCACGAACGCTGCTGACC
AGTGCCACACGTGAGCACGCATAGAATAAATACCACCAGAACTGCGGGTG
GTGTGGCGTGAAAACGTCCGTGCTTGCGCATGCGTGCATGCCACCAGGCT
CAACCGCGACCGCTCCTCCTCTCGCTTGAAAAAAGAGCGTGTAATCGCAT
ATGTACACACAGTCGGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig669:21062..25778+

>mRNA_L-elsbetiae_contig669.15423.1 ID=mRNA_L-elsbetiae_contig669.15423.1|Name=mRNA_L-elsbetiae_contig669.15423.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=846bp|location=Sequence derived from alignment at L-elsbetiae_contig669:21062..25778+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCCAAGCGTGATGTCCAAGCGTGGGCGCGCCGGTGCCCAGGGCAACA
AGTACCGCATGACCCTCGGTCTGCCCGTGGCCGCGGTGATGAACTGCTGC
GACAACAGCGGGGCCAAGAACCTGTACATCATCTCGGTGTGCGGGATCAA
GGGTCGCCTGAACCGCCTGCCGTCTGCCGGGCGCGCCGGTGCCCAGGGCA
ACAAGTACCGCATGACCCTCGGTCTGCCCGTGGCCGCGGTGATGAACTGC
TGCGACAACAGCGGGGCCAAGAACCTGTACATCATCTCGGTGTGCGGGAT
CAAGGGTCGCCTGAACCGCCTGCCGTCTGCCGGTGTCGGTGACATGGTCA
TGGCCACCGTCCGCAAGGGAAAGCCGGAGCTCAGGAAGAAGGGTGTCGGT
GACATGGTCATGGCCACCGTCCGCAAGGGAAAGCCGGAGCTCAGGAAGAA
GGTGATGCCTGCCGTGGTGGTGAGGCAGCGCAAGGCCTGGAGGCGGAAGG
ACGGTGTCTTCATCTACTTCGAGGACAACGGCGGCGTCATTGTGAACAAC
AAGGGCGAGATGAAGGTGATGCCTGCCGTGGTGGTGAGGCAGCGCAAGGC
CTGGAGGCGGAAGGACGGTGTCTTCATCTACTTCGAGGACAACGGCGGCG
TCATTGTGAACAACAAGGGCGAGATGAAGGGTTCGGCCATCAACGGCCCC
GTCGCCAAGGAGTGCGCTGACCTGTGGCCCCGTATTGCCAGCAACGCCGG
CTCCATCGTTTAAGTTCGGCCATCAACGGCCCCGTCGCCAAGGAGTGCGC
TGACCTGTGGCCCCGTATTGCCAGCAACGCCGGCTCCATCGTTTAA
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