mRNA_L-elsbetiae_contig6675.15406.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6675.15406.1 vs. uniprot
Match: A0A6H5JYX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX7_9PHAE) HSP 1 Score: 348 bits (893), Expect = 6.380e-116 Identity = 168/194 (86.60%), Postives = 183/194 (94.33%), Query Frame = 1 Query: 4 MSRNAAAARYGMSPTSLTRRLSGECAMGARVGPGTVMSEAEEDAVEDILMYAGRNYIPLTTADLKERVRQLCNDGRPIPWSPEKGPGRRWLEGFLGRHERISLRLARIYESNRVTSAEDQRLHQFYDFWGKFIDEHQPAPDHIWNTDESGGTVQGTQGLRVLAERGQPVVPQMRSTSRENVTIVTTINAAGAVL 585 MS NAAAA YG+S TSL+RRLSGECA+ ARVGPGTVM+ AEEDA+ED+L+YAGRN+IPLTTADL ERVRQLCNDGRPIPW+P+KGPGR WLEGFLGRHERISLRLARIYESNRVTSAED+RLH+FYDFWG+FIDEHQPA DH+WNTDESGGTVQGTQG RV+AERGQPVV QMRSTSREN TIVTTINAAGAVL Sbjct: 37 MSGNAAAAAYGISKTSLSRRLSGECAIDARVGPGTVMTAAEEDALEDVLLYAGRNFIPLTTADLTERVRQLCNDGRPIPWTPDKGPGRSWLEGFLGRHERISLRLARIYESNRVTSAEDERLHKFYDFWGQFIDEHQPAADHVWNTDESGGTVQGTQGQRVMAERGQPVVAQMRSTSRENCTIVTTINAAGAVL 230
BLAST of mRNA_L-elsbetiae_contig6675.15406.1 vs. uniprot
Match: A0A6H5JKT2_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKT2_9PHAE) HSP 1 Score: 274 bits (701), Expect = 1.890e-89 Identity = 127/158 (80.38%), Postives = 145/158 (91.77%), Query Frame = 1 Query: 112 MSEAEEDAVEDILMYAGRNYIPLTTADLKERVRQLCNDGRPIPWSPEKGPGRRWLEGFLGRHERISLRLARIYESNRVTSAEDQRLHQFYDFWGKFIDEHQPAPDHIWNTDESGGTVQGTQGLRVLAERGQPVVPQMRSTSRENVTIVTTINAAGAVL 585 M++AEED VED+L+YAGRN+IPLTTADL ERVR+LCNDGRPIPW+ +KGPG+ WL+GFLGRHE IS RLARIYESNRVTS+ED+RLH+FYDFW +F+ EH+PA DHIWNTDESGGT+QG QG +V AERGQPVVPQMRSTSREN TIVTTINAAGAVL Sbjct: 1 MTKAEEDVVEDLLLYAGRNFIPLTTADLTERVRRLCNDGRPIPWNSDKGPGKDWLKGFLGRHEGISHRLARIYESNRVTSSEDERLHKFYDFWAEFLGEHRPAADHIWNTDESGGTIQGAQGQQVYAERGQPVVPQMRSTSRENCTIVTTINAAGAVL 158
BLAST of mRNA_L-elsbetiae_contig6675.15406.1 vs. uniprot
Match: A0A6H5JR26_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR26_9PHAE) HSP 1 Score: 260 bits (665), Expect = 5.090e-84 Identity = 134/194 (69.07%), Postives = 145/194 (74.74%), Query Frame = 1 Query: 4 MSRNAAAARYGMSPTSLTRRLSGECAMGARVGPGTVMSEAEEDAVEDILMYAGRNYIPLTTADLKERVRQLCNDGRPIPWSPEKGPGRRWLEGFLGRHERISLRLARIYESNRVTSAEDQRLHQFYDFWGKFIDEHQPAPDHIWNTDESGGTVQGTQGLRVLAERGQPVVPQMRSTSRENVTIVTTINAAGAVL 585 MSRNAAAA YG+S TSL+RRLS DL ERVRQLCNDGRPIPW+P+KGPGR WLEGFLGRH+RISLRLARIYESNRVT ED+RLH+FYDFWG+F+DEHQPA DH+WNTDESGGTVQGTQG RV+AERGQPVV QMRSTSRENVTIVTTINAAGAVL Sbjct: 1 MSRNAAAAAYGVSKTSLSRRLS----------------------------------------DLTERVRQLCNDGRPIPWTPDKGPGRSWLEGFLGRHKRISLRLARIYESNRVTCVEDERLHKFYDFWGQFLDEHQPAADHVWNTDESGGTVQGTQGQRVVAERGQPVVAQMRSTSRENVTIVTTINAAGAVL 154
BLAST of mRNA_L-elsbetiae_contig6675.15406.1 vs. uniprot
Match: A0A6H5K6W6_9PHAE (HTH psq-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6W6_9PHAE) HSP 1 Score: 268 bits (684), Expect = 6.450e-84 Identity = 124/150 (82.67%), Postives = 138/150 (92.00%), Query Frame = 1 Query: 4 MSRNAAAARYGMSPTSLTRRLSGECAMGARVGPGTVMSEAEEDAVEDILMYAGRNYIPLTTADLKERVRQLCNDGRPIPWSPEKGPGRRWLEGFLGRHERISLRLARIYESNRVTSAEDQRLHQFYDFWGKFIDEHQPAPDHIWNTDESG 453 MSRNAAAA YG+S SL+RRLSGECAM ARVGPGTVM+ AEEDA+ED+L+YAGRNYIPLT ADL ERVRQLCNDGRPIPW+P+KGPGR WLEGFLGRHERISLRLARIYESNRVT D+RLH+F+DFWG+F+DEHQPA DH+WNTDESG Sbjct: 380 MSRNAAAAAYGVSKMSLSRRLSGECAMDARVGPGTVMTAAEEDALEDVLLYAGRNYIPLTPADLTERVRQLCNDGRPIPWTPDKGPGRSWLEGFLGRHERISLRLARIYESNRVTCVGDERLHKFFDFWGQFLDEHQPAADHVWNTDESG 529
BLAST of mRNA_L-elsbetiae_contig6675.15406.1 vs. uniprot
Match: A0A6H5JR11_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR11_9PHAE) HSP 1 Score: 257 bits (657), Expect = 4.240e-83 Identity = 116/150 (77.33%), Postives = 135/150 (90.00%), Query Frame = 1 Query: 139 EDILMYAGRNYIPLTTADLKERVRQLCNDGRPIPWSPEKGPGRRWLEGFLGRHERISLRLARIYESNRVTSAEDQRLHQFYDFWGKFIDEHQPAPDHIWNTDESGGTVQGTQGLRVLAERGQPVVPQMRSTSRENVTIVTTINAAGAVLE 588 +D+L+YAGRNYIPLT DLKERVRQLCNDGRPIPW P+KGPG+ WL+GFL RH+RISLRLARIYE+NR+TS E+ RLH FY FW +F++EH+PAPDH+WNTDESGGT+QGTQ RV AE+GQPVVPQMR+ SREN TIVTTINAAGAVL+ Sbjct: 4 KDVLLYAGRNYIPLTRNDLKERVRQLCNDGRPIPWDPDKGPGKSWLQGFLRRHDRISLRLARIYEANRMTSPENDRLHNFYKFWQEFVNEHKPAPDHVWNTDESGGTIQGTQTQRVFAEQGQPVVPQMRANSRENCTIVTTINAAGAVLD 153
BLAST of mRNA_L-elsbetiae_contig6675.15406.1 vs. uniprot
Match: A0A6H5JS97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS97_9PHAE) HSP 1 Score: 258 bits (658), Expect = 6.610e-79 Identity = 132/195 (67.69%), Postives = 154/195 (78.97%), Query Frame = 1 Query: 1 RMSRNAAAARYGMSPTSLTRRLSGECAMGARVGPGTVMSEAEEDAVEDILMYAGRNYIPLTTADLKERVRQLCNDGRPIPWSPEKGPGRRWLEGFLGRHERISLRLARIYESNRVTSAEDQRLHQFYDFWGKFIDEHQPAPDHIWNTDESGGTVQGTQGLRVLAERGQPVVPQMRSTSRENVTIVTTINAAGAVL 585 RMS+NAAAA +G+ +SL RRL G CAM ARVGPGTVM++AEEDAV+ +L+YAGRN+IPLTTADL ERV +LCNDGRPIPW+ +KGPG+ WL+GFLGRHE IS RLARIYESNRVTS+ED+RLH+FY FW +F+ EH+PA DHIWNTDESG T GL G P + EN TIVTTINAAGAVL Sbjct: 36 RMSQNAAAAAFGLGRSSLQRRLDGNCAMDARVGPGTVMTKAEEDAVKYLLLYAGRNFIPLTTADLTERVSRLCNDGRPIPWNSDKGPGKDWLKGFLGRHEGISHRLARIYESNRVTSSEDERLHKFYGFWAEFLGEHRPAADHIWNTDESG-----TAGLCGTGAAGGPADAFHFA---ENCTIVTTINAAGAVL 222
BLAST of mRNA_L-elsbetiae_contig6675.15406.1 vs. uniprot
Match: A0A6H5JLA4_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLA4_9PHAE) HSP 1 Score: 242 bits (618), Expect = 4.800e-78 Identity = 110/153 (71.90%), Postives = 134/153 (87.58%), Query Frame = 1 Query: 4 MSRNAAAARYGMSPTSLTRRLSGECAMGARVGPGTVMSEAEEDAVEDILMYAGRNYIPLTTADLKERVRQLCNDGRPIPWSPEKGPGRRWLEGFLGRHERISLRLARIYESNRVTSAEDQRLHQFYDFWGKFIDEHQPAPDHIWNTDESGGTV 462 MSR AAAA +G++ TSL RRLSGEC + ARVG GTV+ + EE+A+ED+L+YAGRNYIPLT DLKERVRQLCNDGRPIPW P+KGPG+ WL+GFL R++RISLRLARIYE+NR+TS ED RLH FY+FW +F++EH+PAPDH+WNTDESGG + Sbjct: 23 MSRYAAAAAFGLTKTSLLRRLSGECDIDARVGHGTVLMKEEENALEDVLLYAGRNYIPLTRNDLKERVRQLCNDGRPIPWDPDKGPGKSWLQGFLRRYDRISLRLARIYEANRMTSPEDDRLHNFYNFWQEFVNEHKPAPDHVWNTDESGGAM 175
BLAST of mRNA_L-elsbetiae_contig6675.15406.1 vs. uniprot
Match: A0A6H5JTL4_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTL4_9PHAE) HSP 1 Score: 239 bits (609), Expect = 4.880e-77 Identity = 110/149 (73.83%), Postives = 130/149 (87.25%), Query Frame = 1 Query: 4 MSRNAAAARYGMSPTSLTRRLSGECAMGARVGPGTVMSEAEEDAVEDILMYAGRNYIPLTTADLKERVRQLCNDGRPIPWSPEKGPGRRWLEGFLGRHERISLRLARIYESNRVTSAEDQRLHQFYDFWGKFIDEHQPAPDHIWNTDES 450 MSR AAAA +G+S TSL RRLSGEC M ARVG GTV+++ EE+A+ED+L+YA RNYIPLT DLKERVRQLCNDGRPIPW P+KGPG+ WL+GFL RH+RISLRLARIYE+NR+TS ED RLH FY FW +F++EH+PAPDH+WNTDES Sbjct: 23 MSRYAAAAAFGLSKTSLLRRLSGECDMDARVGHGTVLTKEEENALEDVLLYACRNYIPLTRNDLKERVRQLCNDGRPIPWDPDKGPGKSWLQGFLRRHDRISLRLARIYEANRMTSPEDDRLHNFYKFWQEFVNEHKPAPDHVWNTDES 171
BLAST of mRNA_L-elsbetiae_contig6675.15406.1 vs. uniprot
Match: A0A6H5JNM8_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNM8_9PHAE) HSP 1 Score: 234 bits (596), Expect = 6.030e-76 Identity = 103/124 (83.06%), Postives = 115/124 (92.74%), Query Frame = 1 Query: 82 MGARVGPGTVMSEAEEDAVEDILMYAGRNYIPLTTADLKERVRQLCNDGRPIPWSPEKGPGRRWLEGFLGRHERISLRLARIYESNRVTSAEDQRLHQFYDFWGKFIDEHQPAPDHIWNTDESG 453 MGARVGPGTVM+ EEDA+E +L+YA RNYIPLTTADL ERVRQLCNDGRPIPW+P+KGPGR WLEGFLGRHERISLRLARIYESNR+T ED+RLH+FYDFWG+F+DEHQPA DH+WNTDESG Sbjct: 1 MGARVGPGTVMTAGEEDALEGVLLYAARNYIPLTTADLTERVRQLCNDGRPIPWTPDKGPGRSWLEGFLGRHERISLRLARIYESNRMTCVEDERLHKFYDFWGQFLDEHQPAADHVWNTDESG 124
BLAST of mRNA_L-elsbetiae_contig6675.15406.1 vs. uniprot
Match: A0A6H5JDZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDZ5_9PHAE) HSP 1 Score: 236 bits (601), Expect = 2.620e-75 Identity = 109/150 (72.67%), Postives = 130/150 (86.67%), Query Frame = 1 Query: 4 MSRNAAAARYGMSPTSLTRRLSGECAMGARVGPGTVMSEAEEDAVEDILMYAGRNYIPLTTADLKERVRQLCNDGRPIPWSPEKGPGRRWLEGFLGRHERISLRLARIYESNRVTSAEDQRLHQFYDFWGKFIDEHQPAPDHIWNTDESG 453 MSR AAAA +G+S TSL RRLSGEC M ARVG GTV+++ EE+A+ED+L+YAGRNYIPLT DLKERVRQLCND RPIPW P+KG G+ WL+GFL H+RISLRLARIYE+NR+TS ED RLH+FY FW +F++EH+PAPDH+WNTDESG Sbjct: 23 MSRYAAAAAFGLSKTSLLRRLSGECDMDARVGHGTVLTKEEENALEDVLLYAGRNYIPLTRNDLKERVRQLCNDDRPIPWDPDKGLGKSWLQGFLRGHDRISLRLARIYEANRMTSPEDDRLHKFYKFWQEFVNEHKPAPDHVWNTDESG 172 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6675.15406.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6675.15406.1 >prot_L-elsbetiae_contig6675.15406.1 ID=prot_L-elsbetiae_contig6675.15406.1|Name=mRNA_L-elsbetiae_contig6675.15406.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=218bp MSRNAAAARYGMSPTSLTRRLSGECAMGARVGPGTVMSEAEEDAVEDILMback to top mRNA from alignment at L-elsbetiae_contig6675:7506..8854- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6675.15406.1 ID=mRNA_L-elsbetiae_contig6675.15406.1|Name=mRNA_L-elsbetiae_contig6675.15406.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1349bp|location=Sequence derived from alignment at L-elsbetiae_contig6675:7506..8854- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6675:7506..8854- >mRNA_L-elsbetiae_contig6675.15406.1 ID=mRNA_L-elsbetiae_contig6675.15406.1|Name=mRNA_L-elsbetiae_contig6675.15406.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1308bp|location=Sequence derived from alignment at L-elsbetiae_contig6675:7506..8854- (Laminarionema elsbetiae ELsaHSoW15)back to top |