mRNA_L-elsbetiae_contig6671.15404.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6671.15404.1 vs. uniprot
Match: D7FLK7_ECTSI (D-3-phosphoglycerate dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLK7_ECTSI) HSP 1 Score: 164 bits (414), Expect = 2.360e-44 Identity = 83/123 (67.48%), Postives = 92/123 (74.80%), Query Frame = 1 Query: 37 GLRCPTGTGSRTTAKVFTFNDCISAAFAVDIPWNKCDVSTYSWQKARA-------IVLSPRAVERLETFTLDRPLPKVFRMIRKGKVDRSIFDGFTITAPSMLCVEDCTDALQWCYTAVGGLD 384 G++ P G TFNDC SAAFA+DIPWNKCDVSTYSWQK +VLSPRAVERLE+FT DRPLPK+FRM++KGKVDRSIFDG TI PSMLCVED DALQWC T VGGL+ Sbjct: 739 GVKVPNGDWISDNRTGLTFNDCTSAAFAMDIPWNKCDVSTYSWQKVLGGEGAHGVMVLSPRAVERLESFTPDRPLPKIFRMVKKGKVDRSIFDGSTINTPSMLCVEDYIDALQWCDT-VGGLN 860
BLAST of mRNA_L-elsbetiae_contig6671.15404.1 vs. uniprot
Match: A0A835YXH9_9STRA (D-3-phosphoglycerate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXH9_9STRA) HSP 1 Score: 130 bits (328), Expect = 9.490e-33 Identity = 68/121 (56.20%), Postives = 83/121 (68.60%), Query Frame = 1 Query: 37 GLRCPTGTGSRTTAKVFTFNDCISAAFAVDIPWNKCDVSTYSWQKARA-------IVLSPRAVERLETFTLD-RPLPKVFRMIRKGKVDRSIFDGFTITAPSMLCVEDCTDALQWCYTAVG 375 G++ P G + T ND SAAFA+DIPW+K DV+TYSWQK ++LSPRAVERLET+ + RPLPK+FRM +KGKVDRSIF+G TI PSMLCVED DAL W ++ G Sbjct: 726 GVKVPNGDWISSDRTGLTLNDATSAAFAMDIPWDKVDVTTYSWQKVLGGEGAHGVMILSPRAVERLETYVPENRPLPKIFRMTKKGKVDRSIFEGSTINTPSMLCVEDYIDALAWTDSSGG 846
BLAST of mRNA_L-elsbetiae_contig6671.15404.1 vs. uniprot
Match: A0A1Z8KSB8_9PROT (Phosphoserine transaminase n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1Z8KSB8_9PROT) HSP 1 Score: 126 bits (316), Expect = 2.980e-32 Identity = 67/122 (54.92%), Postives = 81/122 (66.39%), Query Frame = 1 Query: 37 GLRCPTGTGSRTTAKVFTFNDCISAAFAVDIPWNKCDVSTYSWQKARA-------IVLSPRAVERLETFTLDRPLPKVFRMIRKGKVDRSIFDGFTITAPSMLCVEDCTDALQWCYTAVGGL 381 G+R P G + TF D SAAFA+D+PW+K DV+TYSWQK ++LSPRAVERLE+FT DRPLPK+FRM + GK++ IF G TI PSML VED DAL W + VGGL Sbjct: 149 GVRVPNGDWIADDREGLTFCDATSAAFAMDLPWSKLDVTTYSWQKVLGGEAQHGMLILSPRAVERLESFTPDRPLPKIFRMTKGGKLNEGIFKGETINTPSMLAVEDQLDALNWAKS-VGGL 269
BLAST of mRNA_L-elsbetiae_contig6671.15404.1 vs. uniprot
Match: A0A352CDT2_9PROT (Phosphoserine aminotransferase (Fragment) n=1 Tax=Hyphomonadaceae bacterium TaxID=2026748 RepID=A0A352CDT2_9PROT) HSP 1 Score: 121 bits (303), Expect = 3.190e-32 Identity = 61/103 (59.22%), Postives = 73/103 (70.87%), Query Frame = 1 Query: 94 NDCISAAFAVDIPWNKCDVSTYSWQKARA-------IVLSPRAVERLETFTLDRPLPKVFRMIRKGKVDRSIFDGFTITAPSMLCVEDCTDALQWCYTAVGGL 381 ND SAAFA I W+KCDV+T+SWQK ++LSPRAVERLE+FT DRPLPK+FRM +KGK+D +F G TI PSML +ED DAL W A+GGL Sbjct: 13 NDATSAAFAQAIAWDKCDVTTFSWQKVLGGEAAHGMLILSPRAVERLESFTPDRPLPKIFRMTKKGKLDEELFQGATINTPSMLALEDYHDALTWAE-AIGGL 114
BLAST of mRNA_L-elsbetiae_contig6671.15404.1 vs. uniprot
Match: A0A2E2QDT6_9PROT (Phosphoserine transaminase n=1 Tax=Micavibrio sp. TaxID=2024841 RepID=A0A2E2QDT6_9PROT) HSP 1 Score: 125 bits (313), Expect = 7.920e-32 Identity = 66/129 (51.16%), Postives = 83/129 (64.34%), Query Frame = 1 Query: 31 PW-----GLRCPTGTGSRTTAKVFTFNDCISAAFAVDIPWNKCDVSTYSWQKARA-------IVLSPRAVERLETFTLDRPLPKVFRMIRKGKVDRSIFDGFTITAPSMLCVEDCTDALQWCYTAVGGL 381 PW G+R P G K T D SA FA D+PW+K DV+T+SWQK +VLSPRAVERLE++T DRPLPK+FRM +KGK++ +IF+G TI PSML VEDC AL W ++GG+ Sbjct: 139 PWNGTTSGVRVPNGDWISPDRKGLTICDATSAVFAYDMPWDKLDVTTWSWQKVLGSEAAHGMLVLSPRAVERLESYTPDRPLPKIFRMTKKGKLNTAIFEGSTINTPSMLAVEDCLVALNW-VRSIGGI 266
BLAST of mRNA_L-elsbetiae_contig6671.15404.1 vs. uniprot
Match: K9UWR4_9CYAN (Phosphoserine transaminase n=1 Tax=Calothrix sp. PCC 6303 TaxID=1170562 RepID=K9UWR4_9CYAN) HSP 1 Score: 124 bits (312), Expect = 1.140e-31 Identity = 66/122 (54.10%), Postives = 79/122 (64.75%), Query Frame = 1 Query: 37 GLRCPTGTGSRTTAKVFTFNDCISAAFAVDIPWNKCDVSTYSWQKARA-------IVLSPRAVERLETFTLDRPLPKVFRMIRKGKVDRSIFDGFTITAPSMLCVEDCTDALQWCYTAVGGL 381 G+R P G + + T D SAAFA+DIPW+K DV TYSWQK +VLSPRAVERLET+ +RPLPK+FRM +KGK+ IF G TI PSMLCVED D L W + +GGL Sbjct: 151 GVRVPNGDWIKDDRQGLTICDATSAAFAMDIPWHKIDVLTYSWQKVLGGEAQHGVVVLSPRAVERLETYQPERPLPKLFRMAQKGKLIEGIFKGDTINTPSMLCVEDALDGLNWAES-IGGL 271
BLAST of mRNA_L-elsbetiae_contig6671.15404.1 vs. uniprot
Match: A0A7C7SZ75_9PROT (Phosphoserine transaminase n=1 Tax=Micavibrio sp. TaxID=2024841 RepID=A0A7C7SZ75_9PROT) HSP 1 Score: 124 bits (312), Expect = 1.140e-31 Identity = 64/122 (52.46%), Postives = 79/122 (64.75%), Query Frame = 1 Query: 37 GLRCPTGTGSRTTAKVFTFNDCISAAFAVDIPWNKCDVSTYSWQKARA-------IVLSPRAVERLETFTLDRPLPKVFRMIRKGKVDRSIFDGFTITAPSMLCVEDCTDALQWCYTAVGGL 381 G+R P G + K TF D SA FA D+PW K DV T+SWQK +VLSPRAV+RLE++T DRPLPK+FRM KGK + IF+G TI PSM+ VEDC DAL W ++GG+ Sbjct: 147 GVRVPDGDWIASDRKGLTFCDATSAVFAYDMPWKKLDVVTWSWQKVLGGEAAHGMLVLSPRAVKRLESYTPDRPLPKIFRMTNKGKFNAGIFEGLTINTPSMMAVEDCIDALNW-VESLGGV 267
BLAST of mRNA_L-elsbetiae_contig6671.15404.1 vs. uniprot
Match: A0A7S2CJL9_9STRA (Phosphoserine transaminase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CJL9_9STRA) HSP 1 Score: 124 bits (311), Expect = 1.150e-31 Identity = 63/106 (59.43%), Postives = 78/106 (73.58%), Query Frame = 1 Query: 88 TFNDCISAAFAVDIPWNKCDVSTYSWQKARA-------IVLSPRAVERLETFTLD-RPLPKVFRMIRKGKVDRSIFDGFTITAPSMLCVEDCTDALQWCYTAVGGL 381 TFND SA FA++I W+K DV+TYSWQK ++LSPRAVERLE+FT + RPLPK+FRM++KGKVD ++F G TI PSM+CVED DAL W +VGGL Sbjct: 161 TFNDATSAVFAMEIDWSKVDVTTYSWQKVMGGEGAHGMLILSPRAVERLESFTPENRPLPKIFRMVKKGKVDAALFKGSTINTPSMICVEDYLDALAWA-DSVGGL 265
BLAST of mRNA_L-elsbetiae_contig6671.15404.1 vs. uniprot
Match: UPI0019E56F54 (Phosphoserine transaminase n=1 Tax=Chlorogloeopsis fritschii C42_A2020_084 TaxID=2774336 RepID=UPI0019E56F54) HSP 1 Score: 122 bits (305), Expect = 2.780e-31 Identity = 66/122 (54.10%), Postives = 77/122 (63.11%), Query Frame = 1 Query: 37 GLRCPTGTGSRTTAKVFTFNDCISAAFAVDIPWNKCDVSTYSWQKARA-------IVLSPRAVERLETFTLDRPLPKVFRMIRKGKVDRSIFDGFTITAPSMLCVEDCTDALQWCYTAVGGL 381 G+R P G + T D SA FA+DIPW+K DV TYSWQK IVLSPRAVERLET+ RPLPK+FRM +KGK+ IF G TI PSMLCVED D L+W + +GGL Sbjct: 66 GVRVPNGDWIASDRAGLTICDATSAVFAMDIPWDKLDVVTYSWQKVLGGEAQHGVIVLSPRAVERLETYKPPRPLPKLFRMAQKGKLIEGIFQGDTINTPSMLCVEDALDGLKWAES-IGGL 186
BLAST of mRNA_L-elsbetiae_contig6671.15404.1 vs. uniprot
Match: A0A2M9PE13_9RHOB (Phosphoserine aminotransferase (Fragment) n=1 Tax=Amaricoccus sp. HAR-UPW-R2A-40 TaxID=1985299 RepID=A0A2M9PE13_9RHOB) HSP 1 Score: 119 bits (299), Expect = 3.120e-31 Identity = 61/105 (58.10%), Postives = 72/105 (68.57%), Query Frame = 1 Query: 88 TFNDCISAAFAVDIPWNKCDVSTYSWQKARA-------IVLSPRAVERLETFTLDRPLPKVFRMIRKGKVDRSIFDGFTITAPSMLCVEDCTDALQWCYTAVGGL 381 TF D SAAFA D+PW+K DV+T+SWQKA ++LSPRAVERLETF DRPLPK+FRM + GK+ IF G TI PSMLC+ D DAL W +GGL Sbjct: 4 TFCDATSAAFAQDLPWDKLDVTTFSWQKAMGGEGGHGVLILSPRAVERLETFAPDRPLPKIFRMTKGGKLIEGIFLGETINTPSMLCIADAVDALDW-MEGLGGL 107 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6671.15404.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6671.15404.1 >prot_L-elsbetiae_contig6671.15404.1 ID=prot_L-elsbetiae_contig6671.15404.1|Name=mRNA_L-elsbetiae_contig6671.15404.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=121bp MAPPWGLRCPTGTGSRTTAKVFTFNDCISAAFAVDIPWNKCDVSTYSWQKback to top mRNA from alignment at L-elsbetiae_contig6671:8151..10158- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6671.15404.1 ID=mRNA_L-elsbetiae_contig6671.15404.1|Name=mRNA_L-elsbetiae_contig6671.15404.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2008bp|location=Sequence derived from alignment at L-elsbetiae_contig6671:8151..10158- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6671:8151..10158- >mRNA_L-elsbetiae_contig6671.15404.1 ID=mRNA_L-elsbetiae_contig6671.15404.1|Name=mRNA_L-elsbetiae_contig6671.15404.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=726bp|location=Sequence derived from alignment at L-elsbetiae_contig6671:8151..10158- (Laminarionema elsbetiae ELsaHSoW15)back to top |