mRNA_L-elsbetiae_contig6667.15395.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6667.15395.1 vs. uniprot
Match: A0A836CMU5_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMU5_9STRA) HSP 1 Score: 154 bits (388), Expect = 4.130e-41 Identity = 73/104 (70.19%), Postives = 86/104 (82.69%), Query Frame = 1 Query: 25 LPTVVSQAVDAIIEHQGAAEQTEVNQWVADNELAVSKYADSLEHVDSGRKISSDPKTWVCEDSGKTENLWLNLSTGYIGSGRQNWDGSGGTGAALRHYQETGSK 336 LPT+V QA DA+I HQGAAEQ EV W A+ EL VSKYA++L D+G +IS+DP +W C DSG TENLWLNLSTGYIGSGR+NWDGSGG+GAAL+HY+ETG K Sbjct: 161 LPTLVCQAADAVITHQGAAEQAEVASWEAEQELPVSKYAENLPVEDNGVRISNDPSSWKCADSGVTENLWLNLSTGYIGSGRRNWDGSGGSGAALKHYEETGRK 264
BLAST of mRNA_L-elsbetiae_contig6667.15395.1 vs. uniprot
Match: A0A7S2V2B3_9STRA (Ubiquitinyl hydrolase 1 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2B3_9STRA) HSP 1 Score: 142 bits (359), Expect = 5.030e-40 Identity = 66/102 (64.71%), Postives = 82/102 (80.39%), Query Frame = 1 Query: 25 LPTVVSQAVDAIIEHQGAAEQTEVNQWVADNELAVSKYADSLEHVDSGRKISSDPKTWVCEDSGKTENLWLNLSTGYIGSGRQNWDGSGGTGAALRHYQETG 330 LP +V QAV+AII HQGAA +V+QW D ++ VSKYA++L +D+G+KIS DP TW CE+SG ENLWLNLSTG+IGSGR WDG+GGTGAAL+H+ ETG Sbjct: 37 LPELVLQAVEAIIAHQGAATMDQVDQWTMDEDVPVSKYAENLVQLDNGKKISPDPATWACEESGMKENLWLNLSTGHIGSGRPMWDGTGGTGAALKHFNETG 138
BLAST of mRNA_L-elsbetiae_contig6667.15395.1 vs. uniprot
Match: A0A7R9Y9N6_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y9N6_9STRA) HSP 1 Score: 146 bits (369), Expect = 1.450e-38 Identity = 69/112 (61.61%), Postives = 88/112 (78.57%), Query Frame = 1 Query: 1 MAVENEQGLPTVVSQAVDAIIEHQGAAEQTEVNQWVADNELAVSKYADSLEHVDSGRKISSDPKTWVCEDSGKTENLWLNLSTGYIGSGRQNWDGSGGTGAALRHYQETGSK 336 +A+EN++ +P +V +IEHQG ++Q ++ QWV D EL SKYA++LE +D+G KISSDP TW CEDSG TENLWLNLSTGYIGSGR+NWDGSGGT AL+H++ TG K Sbjct: 138 LALENQE-IPEMVVVVARQVIEHQGYSDQQDLAQWVDDEELKESKYAEALEQLDNGVKISSDPSTWKCEDSGMTENLWLNLSTGYIGSGRRNWDGSGGTNGALKHFEATGQK 248
BLAST of mRNA_L-elsbetiae_contig6667.15395.1 vs. uniprot
Match: D8LDI4_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDI4_ECTSI) HSP 1 Score: 137 bits (344), Expect = 3.670e-35 Identity = 77/138 (55.80%), Postives = 88/138 (63.77%), Query Frame = 1 Query: 16 EQGLPTVVSQAVDAIIEHQGAAEQTEVNQWVADNELAVSKYADSLEHVDSGRKISSDPKTWVCEDSGKTEN-------------------------------LWLNLSTGYIGSGRQNWDGSGGTGAALRHYQETGSK 336 ++ LPT+VSQAVDAIIEHQGAAEQTE +QWVADNEL VSKYAD+LEHVDSGR+ISS+P+ K L+ + GYIGSGRQNWDGSGGTGAALRHY+ETG K Sbjct: 159 DEALPTIVSQAVDAIIEHQGAAEQTEGSQWVADNELIVSKYADTLEHVDSGRRISSEPQDVGVRKQRKDGEPLAQPVHRQAPCGVSSRDRCLEVTKPVPYVLLFPRVFPGYIGSGRQNWDGSGGTGAALRHYEETGRK 296
BLAST of mRNA_L-elsbetiae_contig6667.15395.1 vs. uniprot
Match: A0A7R9TGP0_9VIRI (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TGP0_9VIRI) HSP 1 Score: 134 bits (338), Expect = 2.330e-34 Identity = 66/104 (63.46%), Postives = 79/104 (75.96%), Query Frame = 1 Query: 25 LPTVVSQAVDAIIEHQGAAEQTEVNQWVADNELAVSKYADSLEHVDSGRKISSDPKTWVCEDSGKTENLWLNLSTGYIGSGRQNWDGSGGTGAALRHYQETGSK 336 LP V +A + ++ GA V+ +VAD E VSKYA+SLE +D+G KIS DP TW CE+SG TENLWLNLSTG+IGSGR+NWDGSGGTGAAL HY+ TGSK Sbjct: 151 LPERVIEAANGVLAAAGAERTAAVDAFVADEERKVSKYAESLEQLDNGVKISPDPTTWKCEESGMTENLWLNLSTGHIGSGRRNWDGSGGTGAALTHYEATGSK 254
BLAST of mRNA_L-elsbetiae_contig6667.15395.1 vs. uniprot
Match: A0A7R9VT46_9CHLO (Ubiquitinyl hydrolase 1 (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VT46_9CHLO) HSP 1 Score: 131 bits (330), Expect = 2.750e-34 Identity = 62/104 (59.62%), Postives = 80/104 (76.92%), Query Frame = 1 Query: 25 LPTVVSQAVDAIIEHQGAAEQTEVNQWVADNELAVSKYADSLEHVDSGRKISSDPKTWVCEDSGKTENLWLNLSTGYIGSGRQNWDGSGGTGAALRHYQETGSK 336 LP +V Q VDAI +H A++Q EV W + E VS+YA+ L +D+GR+IS DPK W CE++G+T NLWLNLSTG+IGSGR+NWDGSGG G+ALRH++ TG K Sbjct: 138 LPELVLQVVDAITKHDAASDQAEVAVW--EEEAKVSRYAEGLPQLDTGRRISPDPKDWRCEETGETGNLWLNLSTGFIGSGRRNWDGSGGNGSALRHFEATGRK 239
BLAST of mRNA_L-elsbetiae_contig6667.15395.1 vs. uniprot
Match: A0A2R5GGB5_9STRA (Ubiquitinyl hydrolase 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GGB5_9STRA) HSP 1 Score: 133 bits (334), Expect = 8.130e-34 Identity = 66/105 (62.86%), Postives = 80/105 (76.19%), Query Frame = 1 Query: 25 LPTVVSQAVDAIIEHQGAAEQTEVNQWVADNELA-VSKYADSLEHVDSGRKISSDPKTWVCEDSGKTENLWLNLSTGYIGSGRQNWDGSGGTGAALRHYQETGSK 336 LP + +A DAII + A+ Q E W A E VSK+A++LE +D+G +IS DPKTW CEDSG TENLWLNLSTGYIGSGR+NWDGSGGTGAAL+H++ TG K Sbjct: 151 LPASLLEAADAIIAMEDASSQREFEAWDASEEKRPVSKFAENLEQLDNGVRISPDPKTWRCEDSGLTENLWLNLSTGYIGSGRRNWDGSGGTGAALKHFEATGRK 255
BLAST of mRNA_L-elsbetiae_contig6667.15395.1 vs. uniprot
Match: A0A7S3F788_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3F788_9VIRI) HSP 1 Score: 129 bits (323), Expect = 1.070e-33 Identity = 63/104 (60.58%), Postives = 76/104 (73.08%), Query Frame = 1 Query: 25 LPTVVSQAVDAIIEHQGAAEQTEVNQWVADNELAVSKYADSLEHVDSGRKISSDPKTWVCEDSGKTENLWLNLSTGYIGSGRQNWDGSGGTGAALRHYQETGSK 336 LP V QA + ++ GA + V+ +VAD VSKYAD LE +D+G KIS DP TW C +SG ENLWLNLSTG+IGSGR+NWDGSGGTGAAL H++ TGSK Sbjct: 159 LPEKVIQACNGVLAASGAEREAAVDAFVADEVRKVSKYADGLEQLDNGIKISPDPSTWECAESGMKENLWLNLSTGHIGSGRRNWDGSGGTGAALTHFEATGSK 262
BLAST of mRNA_L-elsbetiae_contig6667.15395.1 vs. uniprot
Match: A0A7S1SZS2_9CHLO (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SZS2_9CHLO) HSP 1 Score: 132 bits (333), Expect = 1.100e-33 Identity = 64/105 (60.95%), Postives = 82/105 (78.10%), Query Frame = 1 Query: 25 LPTVVSQAVDAIIEHQGAAEQTEVNQWVADNELAVSKYADSLEHVDS-GRKISSDPKTWVCEDSGKTENLWLNLSTGYIGSGRQNWDGSGGTGAALRHYQETGSK 336 LP VV QA++A++ H+ A +Q EV+ W + E AVSKYA+SLE + + G+ I SDP W C++SG TENLWLNLSTG+IGSGRQNWDGSGG GAA+RH+ +TG K Sbjct: 135 LPEVVLQAINAVVAHEAAGKQEEVSVW--EEERAVSKYAESLEQLPANGKVIPSDPSQWKCDESGATENLWLNLSTGFIGSGRQNWDGSGGNGAAIRHFDQTGKK 237
BLAST of mRNA_L-elsbetiae_contig6667.15395.1 vs. uniprot
Match: A0A250XHT0_9CHLO (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XHT0_9CHLO) HSP 1 Score: 130 bits (328), Expect = 5.250e-33 Identity = 59/104 (56.73%), Postives = 81/104 (77.88%), Query Frame = 1 Query: 25 LPTVVSQAVDAIIEHQGAAEQTEVNQWVADNELAVSKYADSLEHVDSGRKISSDPKTWVCEDSGKTENLWLNLSTGYIGSGRQNWDGSGGTGAALRHYQETGSK 336 LP +V Q +DAI+ H A+ Q +++ W + E S+YA+ L +D+GRKIS +PK W C+++G TENLWLNLSTG+IGSGR+NWDGSGG G+ALRH+Q+TG+K Sbjct: 137 LPELVIQVIDAIVSHDSASAQEDLSVW--EEERRTSRYAEGLTQLDNGRKISPNPKDWRCDETGATENLWLNLSTGFIGSGRRNWDGSGGNGSALRHFQDTGNK 238 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6667.15395.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6667.15395.1 >prot_L-elsbetiae_contig6667.15395.1 ID=prot_L-elsbetiae_contig6667.15395.1|Name=mRNA_L-elsbetiae_contig6667.15395.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=113bp MAVENEQGLPTVVSQAVDAIIEHQGAAEQTEVNQWVADNELAVSKYADSLback to top mRNA from alignment at L-elsbetiae_contig6667:8718..10364- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6667.15395.1 ID=mRNA_L-elsbetiae_contig6667.15395.1|Name=mRNA_L-elsbetiae_contig6667.15395.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1647bp|location=Sequence derived from alignment at L-elsbetiae_contig6667:8718..10364- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6667:8718..10364- >mRNA_L-elsbetiae_contig6667.15395.1 ID=mRNA_L-elsbetiae_contig6667.15395.1|Name=mRNA_L-elsbetiae_contig6667.15395.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=678bp|location=Sequence derived from alignment at L-elsbetiae_contig6667:8718..10364- (Laminarionema elsbetiae ELsaHSoW15)back to top |