mRNA_L-elsbetiae_contig666.15387.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig666.15387.1
Unique NamemRNA_L-elsbetiae_contig666.15387.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig666.15387.1 vs. uniprot
Match: D8LLJ7_ECTSI (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLJ7_ECTSI)

HSP 1 Score: 377 bits (968), Expect = 2.160e-132
Identity = 182/187 (97.33%), Postives = 184/187 (98.40%), Query Frame = 1 
Query:    1 MASPDPAIAEASAVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKVENVSTGANNKPRLTIVIQECGEL 561
            MASPDPAIAEA  VARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRK+ENVSTG NNKPRLT+VIQECGEL
Sbjct:    1 MASPDPAIAEA--VARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKIENVSTGVNNKPRLTVVIQECGEL 185
[Close]
BLAST of mRNA_L-elsbetiae_contig666.15387.1 vs. uniprot
Match: A0A835Z972_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z972_9STRA)

HSP 1 Score: 306 bits (783), Expect = 3.450e-104
Identity = 144/187 (77.01%), Postives = 159/187 (85.03%), Query Frame = 1 
Query:    1 MASPDPAIAEASAVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKVENVSTGANNKPRLTIVIQECGEL 561
            MASPDPA+AEA  V RG+PVVF D+ IGG   GRIK+ELF D CPKTAENFR+FCTGE + Q +P GYKGAPFHRVIK FM+QGGDFVKGDGTGRMSIYGEKF DENFDLRHTGPGLLS ANSGPNTNGCQFF T AKA WLDG H VFGKVLDPASM  +RKVENV+ G +N+PRL +V+ +CGEL
Sbjct:    1 MASPDPAVAEA--VDRGSPVVFMDIAIGGTEMGRIKIELFADVCPKTAENFRQFCTGEFKRQNLPVGYKGAPFHRVIKGFMIQGGDFVKGDGTGRMSIYGEKFDDENFDLRHTGPGLLSSANSGPNTNGCQFFFTLAKAEWLDGKHTVFGKVLDPASMNVLRKVENVTVGTHNRPRLPVVVSQCGEL 185
[Close]
BLAST of mRNA_L-elsbetiae_contig666.15387.1 vs. uniprot
Match: A0A7S2BCB3_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BCB3_9STRA)

HSP 1 Score: 286 bits (733), Expect = 2.390e-96
Identity = 134/186 (72.04%), Postives = 156/186 (83.87%), Query Frame = 1 
Query:    7 SPDPAIAEASAVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKVENVSTGA-NNKPRLTIVIQECGEL 561
            S DPA+AEA  V RGNPVVFFD+TIGG PAGRIKMELF D CP+TAENFR+FCTGE R    P GYK +PFHR+IK+FM+QGGDF+K DGTGRMSIYGE+F DENF+LRH+ PGLLSMANSGPNTNGCQFF+T AK  WLDG HVVFGKVLDPAS++ +RK ENV     +NKP+L +++ +CGEL
Sbjct:   17 SADPAVAEA--VERGNPVVFFDMTIGGVPAGRIKMELFADECPRTAENFRKFCTGEFRRSNHPVGYKDSPFHRIIKEFMIQGGDFLKQDGTGRMSIYGERFDDENFNLRHSAPGLLSMANSGPNTNGCQFFLTCAKCEWLDGKHVVFGKVLDPASLMVLRKCENVQVEPKSNKPKLPVIVAQCGEL 200
[Close]
BLAST of mRNA_L-elsbetiae_contig666.15387.1 vs. uniprot
Match: A0A067CUM4_SAPPC (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CUM4_SAPPC)

HSP 1 Score: 281 bits (720), Expect = 1.230e-94
Identity = 132/183 (72.13%), Postives = 153/183 (83.61%), Query Frame = 1 
Query:   13 DPAIAEASAVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKVENVSTGANNKPRLTIVIQECGEL 561
            DPA++EA  V RGNPVVFFDV +G AP GRIKMELFK  CPKT ENFR+FCTGE+R   +PTGYKG+ FHRVI DFM+QGGDF+KGDGTGRMSIYG+KFADE+F  +HT PGLLSMANSG +TNGCQFF+T A   WLDG HVVFGK+LDPAS+L +RK+E+V TGA NKP+  + I ECGEL
Sbjct:    2 DPALSEA--VRRGNPVVFFDVALGNAPLGRIKMELFKRECPKTVENFRQFCTGEYRRGDMPTGYKGSHFHRVIPDFMIQGGDFLKGDGTGRMSIYGDKFADESFAYKHTEPGLLSMANSGVDTNGCQFFITCAPCDWLDGKHVVFGKLLDPASLLVMRKIESVQTGAANKPKTPVTITECGEL 182
[Close]
BLAST of mRNA_L-elsbetiae_contig666.15387.1 vs. uniprot
Match: K8YRK9_NANGC (Peptidyl-prolyl cis-trans isomerase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YRK9_NANGC)

HSP 1 Score: 281 bits (719), Expect = 1.520e-94
Identity = 136/183 (74.32%), Postives = 149/183 (81.42%), Query Frame = 1 
Query:   13 DPAIAEASAVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKVENVSTGANNKPRLTIVIQECGEL 561
            D A+ EA  V RGNPVVF DV+I   PAGRIKMELFKD  PKT ENFR+FCTGE+R  G+P GYKG+PFHRVIKDFM+QGGDF+KGDG+G  SIYG+KFADENFDLRHTGPGLLSMANSGPNTNGCQFF+T  K  WLDG HVVFGKVLDPASMLTVRKVEN         RL + + ECGEL
Sbjct:    3 DSAVLEA--VNRGNPVVFLDVSIANRPAGRIKMELFKDVVPKTVENFRQFCTGEYRESGLPLGYKGSPFHRVIKDFMIQGGDFMKGDGSGLKSIYGDKFADENFDLRHTGPGLLSMANSGPNTNGCQFFITCDKCEWLDGKHVVFGKVLDPASMLTVRKVENTDV-----KRLKVEVTECGEL 178
[Close]
BLAST of mRNA_L-elsbetiae_contig666.15387.1 vs. uniprot
Match: A0A485LRW0_9STRA (Peptidyl-prolyl cis-trans isomerase n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A485LRW0_9STRA)

HSP 1 Score: 280 bits (716), Expect = 5.000e-94
Identity = 131/183 (71.58%), Postives = 151/183 (82.51%), Query Frame = 1 
Query:   13 DPAIAEASAVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKVENVSTGANNKPRLTIVIQECGEL 561
            DP +AEA  + +GN VVFFDV +GGAP GRI+MELFK+ CPKT ENFR+FCTGE+R   +P GYK + FHRVIKDFM+QGGDF+KGDGTGRMSIYG+KFADEN  LRHT  GLLSMANSGP TNGCQFF+T     WLDG HVVFGK+LD AS+L +RK+E+V TGANNKPR  +VI ECGEL
Sbjct:    2 DPLLAEA--LRKGNVVVFFDVALGGAPLGRIRMELFKNECPKTVENFRQFCTGEYRRNELPVGYKASTFHRVIKDFMVQGGDFLKGDGTGRMSIYGDKFADENLTLRHTEAGLLSMANSGPGTNGCQFFITCGPCDWLDGKHVVFGKLLDSASLLVMRKIESVPTGANNKPRTPVVITECGEL 182
[Close]
BLAST of mRNA_L-elsbetiae_contig666.15387.1 vs. uniprot
Match: A0A7S2DPX7_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DPX7_9STRA)

HSP 1 Score: 280 bits (715), Expect = 8.720e-94
Identity = 131/186 (70.43%), Postives = 153/186 (82.26%), Query Frame = 1 
Query:    7 SPDPAIAEASAVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKVENVSTGAN-NKPRLTIVIQECGEL 561
            S DPA+ EA  V RGNPVVFFD+TIGG PAGRIKMELF D CPKTAENFR+FCTGE R    P GYKG+PFHR+I++FM+Q GDF+K DGTGR+SIYGEKF DE+F LRH  PGLLSMANSGPNTNGCQFF+T A+  WLDG HVVFGKVLDPAS++ +RK+ENV      +KP+L ++I +CGEL
Sbjct:    5 SADPAVLEA--VERGNPVVFFDITIGGVPAGRIKMELFADECPKTAENFRQFCTGEFRRANHPVGYKGSPFHRIIREFMIQAGDFLKQDGTGRISIYGEKFEDESFSLRHNEPGLLSMANSGPNTNGCQFFLTCARCEWLDGKHVVFGKVLDPASLMVLRKIENVQVDPKTSKPKLPVLIAQCGEL 188
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BLAST of mRNA_L-elsbetiae_contig666.15387.1 vs. uniprot
Match: A0A7S3RA41_DUNTE (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3RA41_DUNTE)

HSP 1 Score: 278 bits (712), Expect = 2.030e-93
Identity = 126/169 (74.56%), Postives = 143/169 (84.62%), Query Frame = 1 
Query:   52 NPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKVENVSTGANNKPRLTIVIQECGE 558
            NPVVFFDVTIGG PAGRIKMELF D CPKT ENFR+FCTGEHR QG+P GYKG+ FHRVIK+FM+QGGDF+KGDGTG  SIYG +FADENF  +HTGPGLLSMANSGPN+NGCQFF+T AK  W+D  HVVFG+V++   ML VRK+ENV+TG NNKP L  +I ECGE
Sbjct:   14 NPVVFFDVTIGGMPAGRIKMELFADVCPKTCENFRQFCTGEHRRQGLPVGYKGSSFHRVIKEFMIQGGDFLKGDGTGSTSIYGSRFADENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKTDWIDNKHVVFGRVIEDG-MLVVRKIENVATGKNNKPNLPCIITECGE 181
[Close]
BLAST of mRNA_L-elsbetiae_contig666.15387.1 vs. uniprot
Match: A0A482RTU9_9ARCH (Peptidylprolyl isomerase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RTU9_9ARCH)

HSP 1 Score: 278 bits (710), Expect = 4.100e-93
Identity = 125/176 (71.02%), Postives = 146/176 (82.95%), Query Frame = 1 
Query:   34 SAVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKVENVSTGANNKPRLTIVIQECGEL 561
            +A+ RGNPVVFFDV+IGG  AGRI++ELF D CPKTAENFR+FC GE+R   +P GYK  PFHRVIK FM+QGGDF +GDGTG++SIYG  F DENF LRHTG GLLSMANSGPNTNGCQFF+T  K  WLDG HVVFGKVLD AS+L VRK+ENV +G N+KP+L + I++CGEL
Sbjct:    7 AAIERGNPVVFFDVSIGGVAAGRIRIELFADVCPKTAENFRQFCCGEYRRNTLPVGYKACPFHRVIKGFMIQGGDFERGDGTGKLSIYGSSFPDENFVLRHTGAGLLSMANSGPNTNGCQFFITCGKCDWLDGKHVVFGKVLDDASLLVVRKIENVPSGPNDKPKLPVTIEQCGEL 182
[Close]
BLAST of mRNA_L-elsbetiae_contig666.15387.1 vs. uniprot
Match: A0A2D4C495_PYTIN (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C495_PYTIN)

HSP 1 Score: 273 bits (699), Expect = 1.940e-91
Identity = 128/183 (69.95%), Postives = 150/183 (81.97%), Query Frame = 1 
Query:   13 DPAIAEASAVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAENFRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYGEKFADENFDLRHTGPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFGKVLDPASMLTVRKVENVSTGANNKPRLTIVIQECGEL 561
            DP + EA  + RGNPVVF D  IGGAPAGR+K+ELFK  CPKT ENFR+FCTGE+R   +P GYK   FHRVIKDFM+QGGDF+KGDGTGRMSIYG+KF DENF  +HT  GLLSMANSGPN+NGCQFF+T A   WLDG HVVFGK+LDPAS+L +RK+E+V  G+N+KP+L+I I ECGEL
Sbjct:    2 DPLLNEA--LKRGNPVVFLDXAIGGAPAGRLKLELFKKDCPKTVENFRQFCTGEYRKSDLPVGYKACTFHRVIKDFMVQGGDFLKGDGTGRMSIYGDKFPDENFLHKHTEAGLLSMANSGPNSNGCQFFITCAPCEWLDGKHVVFGKLLDPASLLLLRKMESVPVGSNSKPKLSISITECGEL 182
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig666.15387.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLJ7_ECTSI2.160e-13297.33Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectoca... [more]
A0A835Z972_9STRA3.450e-10477.01Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribon... [more]
A0A7S2BCB3_9STRA2.390e-9672.04Peptidyl-prolyl cis-trans isomerase n=1 Tax=Floren... [more]
A0A067CUM4_SAPPC1.230e-9472.13Peptidyl-prolyl cis-trans isomerase n=2 Tax=Saprol... [more]
K8YRK9_NANGC1.520e-9474.32Peptidyl-prolyl cis-trans isomerase n=3 Tax=Monodo... [more]
A0A485LRW0_9STRA5.000e-9471.58Peptidyl-prolyl cis-trans isomerase n=5 Tax=Aphano... [more]
A0A7S2DPX7_9STRA8.720e-9470.43Peptidyl-prolyl cis-trans isomerase n=1 Tax=Dictyo... [more]
A0A7S3RA41_DUNTE2.030e-9374.56Peptidyl-prolyl cis-trans isomerase n=1 Tax=Dunali... [more]
A0A482RTU9_9ARCH4.100e-9371.02Peptidylprolyl isomerase n=1 Tax=archaeon TaxID=19... [more]
A0A2D4C495_PYTIN1.940e-9169.95Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pythiu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig666contigL-elsbetiae_contig666:8180..12219 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score379.0
Seed ortholog evalue1.3e-102
Seed eggNOG ortholog2880.D8LLJ7
Preferred namePPIH
KEGG koko:K09567
KEGG Pathwayko03040,map03040
KEGG ModuleM00354
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000398,GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005737,GO:0006139,GO:0006396,GO:0006397,GO:0006457,GO:0006464,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016018,GO:0016043,GO:0016070,GO:0016071,GO:0016604,GO:0016607,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0022607,GO:0030532,GO:0031974,GO:0031981,GO:0032991,GO:0033218,GO:0034641,GO:0036211,GO:0042277,GO:0043021,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043900,GO:0043902,GO:0043903,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044877,GO:0045069,GO:0045070,GO:0045292,GO:0046483,GO:0046540,GO:0048518,GO:0048524,GO:0050789,GO:0050792,GO:0065003,GO:0065007,GO:0070013,GO:0071001,GO:0071704,GO:0071840,GO:0090304,GO:0097525,GO:0097526,GO:0120114,GO:0140096,GO:1901360,GO:1901564,GO:1903900,GO:1903902,GO:1990904
EggNOG free text desc.peptidyl-prolyl cis-trans isomerase activity
EggNOG OGsCOG0652@1,KOG0879@2759
EC5.2.1.8
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03041,ko03110
Ec32 ortholog descriptionCyclophilin-type peptidyl-prolyl cis-trans isomerase
Ec32 orthologEc-04_005600.1
Exons5
Model size564
Cds size564
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig666.15387.1prot_L-elsbetiae_contig666.15387.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig666 8180..12219 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816736.9543707-CDS-L-elsbetiae_contig666:8179..82901622816736.9543707-CDS-L-elsbetiae_contig666:8179..8290Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig666 8180..8290 -
1691683775.9232483-CDS-L-elsbetiae_contig666:8179..82901691683775.9232483-CDS-L-elsbetiae_contig666:8179..8290Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig666 8180..8290 -
1622816736.9681025-CDS-L-elsbetiae_contig666:8912..90251622816736.9681025-CDS-L-elsbetiae_contig666:8912..9025Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig666 8913..9025 -
1691683775.9368374-CDS-L-elsbetiae_contig666:8912..90251691683775.9368374-CDS-L-elsbetiae_contig666:8912..9025Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig666 8913..9025 -
1622816736.9863164-CDS-L-elsbetiae_contig666:9995..101491622816736.9863164-CDS-L-elsbetiae_contig666:9995..10149Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig666 9996..10149 -
1691683775.9452925-CDS-L-elsbetiae_contig666:9995..101491691683775.9452925-CDS-L-elsbetiae_contig666:9995..10149Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig666 9996..10149 -
1622816737.0009499-CDS-L-elsbetiae_contig666:10751..109011622816737.0009499-CDS-L-elsbetiae_contig666:10751..10901Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig666 10752..10901 -
1691683775.9536066-CDS-L-elsbetiae_contig666:10751..109011691683775.9536066-CDS-L-elsbetiae_contig666:10751..10901Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig666 10752..10901 -
1622816737.0171828-CDS-L-elsbetiae_contig666:12183..122191622816737.0171828-CDS-L-elsbetiae_contig666:12183..12219Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig666 12184..12219 -
1691683775.9616997-CDS-L-elsbetiae_contig666:12183..122191691683775.9616997-CDS-L-elsbetiae_contig666:12183..12219Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig666 12184..12219 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig666.15387.1

>prot_L-elsbetiae_contig666.15387.1 ID=prot_L-elsbetiae_contig666.15387.1|Name=mRNA_L-elsbetiae_contig666.15387.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=188bp
MASPDPAIAEASAVARGNPVVFFDVTIGGAPAGRIKMELFKDTCPKTAEN
FRRFCTGEHRHQGIPTGYKGAPFHRVIKDFMLQGGDFVKGDGTGRMSIYG
EKFADENFDLRHTGPGLLSMANSGPNTNGCQFFVTTAKAAWLDGLHVVFG
KVLDPASMLTVRKVENVSTGANNKPRLTIVIQECGEL*
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mRNA from alignment at L-elsbetiae_contig666:8180..12219-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig666.15387.1 ID=mRNA_L-elsbetiae_contig666.15387.1|Name=mRNA_L-elsbetiae_contig666.15387.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4040bp|location=Sequence derived from alignment at L-elsbetiae_contig666:8180..12219- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCCTCCCCTGACCCGGCCATCGCAGAGGCGAGTGTTTTTAAACGATG
ATCTTGCAGCATGTTGTAAGCTTTGCACCGAAGTCAGTCTGTGGGTGCGA
GCACACACCCCCGAAACGCAGCAGCTTGTAGGTACATTGCATAGCGTACA
TGTTGTATCTAATGTATGTAGTGAACCCTGAAAACCCAACAATGCAGGTA
GGTAGATCGCAGGTGAGGCCGCTCCGTGTCAGCCGTGGGCCAACAGCGAG
TTTAACTAGCACGAGCGCTCCTTTCCTGCACGAGCGCTCCTTTCCTGCAT
TGGAACGTTGCTCTGTTTGATTGCTCTGAAAACCCCTCTAGATGTTGCTC
TCGACTTGTAGACTTTGTAGGTGCCATTGTTGCGGAGACGGGCAACGTCA
ACAGGCGTAGCGCGCTCTTTGCAGCAGTGTAGATCTACACGTGTGTACAT
ATGTATCTGGACAATCTATCGGGACTCTTTGTATATTGCCTGACCAGCTT
AGGTGGACTTTTGATCGCCGATTGGTCGTACTATGTATGTATGTAAGTTG
CTGTATTTTGCATTGCTTCTCAGTCGCCAAATAGTAACATAGCTCTCATG
GGTTCGACCAGAGTGCTATTTCAAGCGCAGCTGCAAGCGTTCTTCGACAA
AATAGCAGTGTACTGCTGCTGTAAAGGCTGTGTCTTGTAGTCTATCTGGC
CTGTGGCTACTGCTGTCTTACCCTCTTGGAAGACAGCTCTTGAAGCTCTA
GACAGTTGATACAAAATTGCACTCTACCATACTGTTTTTTTTGTGTATCT
AGATAGTCTAGGTCCAGCCTTTTCATTTTTTAGTGTAGACTACTTGTACC
AGGTAAGTTAGTTAGCCTGTGACACCAGGAATCGACCGCGTCGACTGTTT
GATTAGTACGGACGTACGGAGGTACTTCCGGAGGTACTGGATGGAGCGAC
CGGAAAGGTTTTTACTGTGAAGAAAACAACAACAATCTTATCTTCCCTAT
GTTTCATAATTGGGGGCAAGATTTTCATATTTACGAACACAGAGCGTCAT
CGCCCTTTCTCTAGATATAGTCTAGACTGTATAGACGAAGTCTTAGACTG
TATACGAAGTAGACTATAACCCCAGAGCAACAACATCGGTACCATATAAC
AGACGGACAGCGGAAGGCAGTGTTACAGCAGCCATGTAGCACGCCTGCTT
TCTCTGTCGGCACAGATCGGCACCAGACCTCATCCTGTTGACCATCAGAC
AAAAGGCACGTTGACTTTCCCGTTTCTCTCTTCACACAACTATGATACCT
GTCCATCTTCGAAAACAGGCGGTTGCACGAGGAAACCCGGTCGTGTTTTT
CGACGTGACCATCGGAGGGGCACCGGCGGGCCGCATCAAGATGGAGCTTT
TCAAGGACACCTGTCCCAAAACCGCAGAAAATTTCAGGCGTTTCTGCACG
GGGGAACACCGACATCAGGTGAGGCCTCTGCACTCTGGCGTTTCGAAACC
TTCGGGTATGGGACACACACACCTCTGCAGCCTTGCTGGTTCGTTCGTGT
GTACACATGGCCTATTTTGGATCTTGAATCAGTCTTTGTAATACAGCAGT
ATGTACTCCTATCTCCGAATACTTGGCGAACGTGAGATACTATACGAAGT
ACATACATAGTGGTGTGTACGGGTGTGTGCAGGTAGGCAGTTGTGCTCGC
AGATGGCATCCCGGGCCGGTTATCGGCAAACCGAAGAAATTGGTTCCCTC
CTCCGCCATCGAAATGTGGCATTTCATGAGTGCCGCATGTCTATGCATAC
CGTTGTTCTCTTCTCTTCTCTATCTTGTTCGTGCTCTTCTTTTCCAGCCA
CTTCCTTGTTGCTCTTGTAGCCCCCTCCCTGCGTCTGTGTTGATGCTTTT
AAGCTATTTATCGTGTTGTTTTTGTATGTAGATGTGCGCCACTGCCTTTT
CGCCCCCTCCCACTACCACGCCCGATATACTTTGGTCATGGAAGACGATG
AAGGCGGTGTTGGTTTTCTTGCGTGGGTGCTTGTTTTGTGGGCTGCTTTG
GGTTTGTTTCGTCGCCACAGGGCATACCGACGGGGTACAAGGGCGCGCCG
TTCCACCGCGTGATCAAGGACTTCATGCTCCAGGGGGGGGACTTCGTGAA
GGGAGACGGCACGGGCAGGATGAGCATCTACGGGGAGAAGTTCGCGGACG
AAAACTTCGACCTTCGCCACACAGGTGACCGAAACATTAATAACTCTGCG
CCTTGTGATGACCTATTAACGGTACATGTATTTATCGTCGATTTTTTTAA
GCCTACATAGCAGAAGATTCTCGGTGGGCTAAAAAAAAAACGACATCACG
CCCGGCGGGCTAAACTTCAAGAGGAACGAGATGGGAAACATTTCCACGCC
ACGCCCCTATGGCATCTACCCGCTACACGCCCGCTGCCCTTCGTGTTAAA
AGTTGTGAAAAAATACTATTGGAAGGAATGTCTTTGCGTGCAACCACCGA
CCCGGTTTCGGTGAAGCCCGAACATTGATCTTGGTCTAGTTGGTATCTCC
GAAGACCGTCCAGCAGGCAGGTCATGGGTTCGAAGCCCGGCGGGAGCGAC
TTTTTCTTGCGAAGTGAGCCTTTTCGCTCGCTTTCCGTCCCTGTCAGTGA
ATAACGCTTGGCGTGTGTACACAAACTTCGACCCCACCGTCGACGAGGGA
AAGGGACGGCTGAATCCTTCTCGCGACAAAAATGTTAGGCGAGCAACCGC
AGAAGGGGGGAATGGGGACTGTCAACGGGACTGTCAACGGGACTGTCAAC
GGGACTGTCTACATCCATTAAAAAACTTACGCAAGCACCGCAGAAGGGGG
GGAGTGGTGGCCTCGGGGAAAGGAACCCTTCTGCGTGACCACGGTTCAGT
ACTCTGGCAAGATGCCCGCGTGACAAAGGAGCCCATCGAGCACTGGAAAT
AAGCGTGAAAAAAGAAGAAAAAAGAAAGGAGATTCTCGCCCCCAAAGAAC
ATCCCAAGACGCGCTGCAAAAACTTGCCAGAATTTGAACGGCTTTGGGAC
TATTTTTTGTAGCCGACCGACCCTGTGTGAGCTGGTTGTCCTCTGCGCGT
CGATTAATCTCTCTTTTCGGCCCTGCTACATACTGTGTCTTTTCTTCGTT
TCTTCTCTGTTTTGATTGCTGCGGTGATTGTTGGGCGTTTCCAGGTCCAG
GGCTTCTGTCTATGGCAAATAGCGGGCCGAACACGAACGGCTGCCAGTTC
TTCGTGACGACGGCAAAGGCCGCATGGCTGGACGGTCTTCACGTCGTATT
CGGAAAGGTGAGATCTCCGTAGATAGCGGCGGCGGAGTGCAGTTGAGGCA
AGAGGCAGACAGACAGCCTGTGTTGCGGCGGCTTTTAGGGAACCTGAAAC
TCGGGTATTTTCGCCTGGAAAAAGCTGCAAAAAAGCTGCACGTCTGCCGG
GCAGAGCACCGGAATTCCCCACGTGCACAAACAAACCGGTGTGCCATCGC
TTTTTCTCGCGATCTGAAAGCACGGAGCGATGTGACGATACTTTTCGCGA
TACTCGGATGTCGTCGTGTGTGTTGCCTCGGAAGAAATCGTCCCGAGCTC
TTCCTTGATGCATCAGTGCCGAAATATGAAGGTGATACCTGAAAAGAAGT
TCGGAATGACCTACCATTAATTACAGAAGGCGCCCGCAAAGCAAGAAAAG
TCTCAAGAAAAAAAAAAGTATGGTAGGTACTGTGCGGCTCAAATTTCAAC
GAAAAATAGGCAAATCGGGCTAATAAACACCTCAATCGTGGGTCCTACAC
TAAACCCTGTACAAAAACCTACGCCCAATAGTGGCGACGAAATAATAAAT
CGAGCCTCAGCCCATGTTTAGCGTTTCTTACTTGGTGACGCCCTCCGTAT
ACGACTGGGGGACCGCTGCTACTGTGCAGGTGTTGGACCCAGCGTCCATG
CTGACGGTGAGGAAGGTCGAGAACGTTTCCACGGGGGCGAACAACAAGCC
CCGGCTTACCATCGTCATACAGGAGTGCGGAGAGCTCTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig666:8180..12219-

>mRNA_L-elsbetiae_contig666.15387.1 ID=mRNA_L-elsbetiae_contig666.15387.1|Name=mRNA_L-elsbetiae_contig666.15387.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1128bp|location=Sequence derived from alignment at L-elsbetiae_contig666:8180..12219- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCCTCCCCTGACCCGGCCATCGCAGAGGCGAGTATGGCCTCCCCTGA
CCCGGCCATCGCAGAGGCGAGTGCGGTTGCACGAGGAAACCCGGTCGTGT
TTTTCGACGTGACCATCGGAGGGGCACCGGCGGGCCGCATCAAGATGGAG
CTTTTCAAGGACACCTGTCCCAAAACCGCAGAAAATTTCAGGCGTTTCTG
CACGGGGGAACACCGACATCAGGCGGTTGCACGAGGAAACCCGGTCGTGT
TTTTCGACGTGACCATCGGAGGGGCACCGGCGGGCCGCATCAAGATGGAG
CTTTTCAAGGACACCTGTCCCAAAACCGCAGAAAATTTCAGGCGTTTCTG
CACGGGGGAACACCGACATCAGGGCATACCGACGGGGTACAAGGGCGCGC
CGTTCCACCGCGTGATCAAGGACTTCATGCTCCAGGGGGGGGACTTCGTG
AAGGGAGACGGCACGGGCAGGATGAGCATCTACGGGGAGAAGTTCGCGGA
CGAAAACTTCGACCTTCGCCACACAGGGCATACCGACGGGGTACAAGGGC
GCGCCGTTCCACCGCGTGATCAAGGACTTCATGCTCCAGGGGGGGGACTT
CGTGAAGGGAGACGGCACGGGCAGGATGAGCATCTACGGGGAGAAGTTCG
CGGACGAAAACTTCGACCTTCGCCACACAGGTCCAGGGCTTCTGTCTATG
GCAAATAGCGGGCCGAACACGAACGGCTGCCAGTTCTTCGTGACGACGGC
AAAGGCCGCATGGCTGGACGGTCTTCACGTCGTATTCGGAAAGGTCCAGG
GCTTCTGTCTATGGCAAATAGCGGGCCGAACACGAACGGCTGCCAGTTCT
TCGTGACGACGGCAAAGGCCGCATGGCTGGACGGTCTTCACGTCGTATTC
GGAAAGGTGTTGGACCCAGCGTCCATGCTGACGGTGAGGAAGGTCGAGAA
CGTTTCCACGGGGGCGAACAACAAGCCCCGGCTTACCATCGTCATACAGG
AGTGCGGAGAGCTCTGAGTGTTGGACCCAGCGTCCATGCTGACGGTGAGG
AAGGTCGAGAACGTTTCCACGGGGGCGAACAACAAGCCCCGGCTTACCAT
CGTCATACAGGAGTGCGGAGAGCTCTGA
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