mRNA_L-elsbetiae_contig666.15386.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig666.15386.1 vs. uniprot
Match: D8LLJ6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLJ6_ECTSI) HSP 1 Score: 285 bits (729), Expect = 2.560e-97 Identity = 134/142 (94.37%), Postives = 140/142 (98.59%), Query Frame = 1 Query: 1 QIVTLRPRTNPTDLTNIFRRAAAVILEEGGVVRSVANHGIRVLPYRIHSRHDIKEKDDRWFSSGRWASAYYDASPAVAKKMEQQLWAEDKVIRVSTRRPSTKMDRIASTHERSNPWDMEWRRRNGIEQPIHNRRRTPPKEKW 426 QIVTLRPRTNPTDLTNIFRRAAAVILEEGGVVRSVANHG+RVLPYR HS+HDIKEKDDRWFSSGRWASAYYDASPAVAKKME+QLWAEDKVIRVSTRRP+TKMDRIASTHERSNPWDMEWR RNGIEQP+HNRRRTPPK+KW Sbjct: 6 QIVTLRPRTNPTDLTNIFRRAAAVILEEGGVVRSVANHGVRVLPYRFHSKHDIKEKDDRWFSSGRWASAYYDASPAVAKKMEEQLWAEDKVIRVSTRRPATKMDRIASTHERSNPWDMEWRNRNGIEQPVHNRRRTPPKKKW 147
BLAST of mRNA_L-elsbetiae_contig666.15386.1 vs. uniprot
Match: A0A835Z0N7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0N7_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 1.130e-21 Identity = 44/118 (37.29%), Postives = 73/118 (61.86%), Query Frame = 1 Query: 4 IVTLRPRTNPTDLTNIFRRAAAVILEEGGVVRSVANHGIRVLPYRIHSRHDIKEKDDRWFSSGRWASAYYDASPAVAKKMEQQLWAEDKVIRVSTRRPSTKMDRIASTHERSNPWDME 357 + T + RT P LT ++RR +LE+GG+VR V NHG++ L YR +R + ++R+ + GRW S Y+DA P K++ L +D +R +T +P KM+ I++ H+ +NPW+ + Sbjct: 7 VFTCKWRTPPEQLTRLYRRLCNTVLEDGGMVRCVENHGVKDLAYRFRARTAMSGSENRYHTRGRWVSMYFDARPETLDKIDADLKMQDFYLRSNTIKPVVKMNWISTRHK-TNPWERD 123
BLAST of mRNA_L-elsbetiae_contig666.15386.1 vs. uniprot
Match: A0A6S8YXD6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8YXD6_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 2.180e-17 Identity = 38/115 (33.04%), Postives = 73/115 (63.48%), Query Frame = 1 Query: 4 IVTLRPRTNPTDLTNIFRRAAAVILEEGGVVRSVANHGIRVLPYRIHSRHDIKEKDDRWFSSGRWASAYYDASPAVAKKMEQQLWAEDKVIRVSTRRPSTKMDRIASTHERSNPW 348 ++T + + LTN + +++++E GG+VR+V NHGIR LP+R +R+ KE +R++ GR+ S +YDASP ++E ++ +D+++R + + K+ I + +E+ NP+ Sbjct: 7 VLTAKNTASFASLTNTVKSISSIVVESGGIVRTVQNHGIRNLPHRFKARYPDKE-GNRYYKEGRFISVWYDASPRTLNQVENEIRLDDQILRYTHLKARNKLWYINNPNEKKNPY 120
BLAST of mRNA_L-elsbetiae_contig666.15386.1 vs. uniprot
Match: A0A7S2IGM9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IGM9_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 1.110e-16 Identity = 38/105 (36.19%), Postives = 67/105 (63.81%), Query Frame = 1 Query: 34 TDLTNIFRRAAAVILEEGGVVRSVANHGIRVLPYRIHSRHDIKEKDDRWFSSGRWASAYYDASPAVAKKMEQQLWAEDKVIRVSTRRPSTKMDRIASTHERSNPW 348 T LT + + ++ ++E GG+VR+V NHGIR LP+R +++ KE +R++ GR+ S +YDASP V K+E ++ +D+++R + + K+ I E+ NP+ Sbjct: 17 TSLTKLMKTISSTVVENGGIVRTVQNHGIRNLPHRFKAKYPDKE-GNRYYKKGRFISVWYDASPRVLAKVENEIRLDDQILRHTHLKARNKLWYINIASEKKNPY 120
BLAST of mRNA_L-elsbetiae_contig666.15386.1 vs. uniprot
Match: A0A7S1YM88_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YM88_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 6.310e-16 Identity = 38/103 (36.89%), Postives = 66/103 (64.08%), Query Frame = 1 Query: 40 LTNIFRRAAAVILEEGGVVRSVANHGIRVLPYRIHSRHDIKEKDDRWFSSGRWASAYYDASPAVAKKMEQQLWAEDKVIRVSTRRPSTKMDRIASTHERSNPW 348 LT++ + + ++E GG+VRSV NHGIR L +R +RH ++ R F GR+ S YYD+SPA+ +++ + L ++ V+R + R K+D I + +++ NP+ Sbjct: 19 LTSLMKEISLKVVENGGIVRSVQNHGIRDLAHRFRARHPDRD-GTRLFQKGRFISVYYDSSPAIQEEVGEILVMDENVLRATHLRARNKLDTINNPYQKKNPY 120
BLAST of mRNA_L-elsbetiae_contig666.15386.1 vs. uniprot
Match: A0A1E7FMF6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FMF6_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 1.590e-15 Identity = 37/115 (32.17%), Postives = 70/115 (60.87%), Query Frame = 1 Query: 4 IVTLRPRTNPTDLTNIFRRAAAVILEEGGVVRSVANHGIRVLPYRIHSRHDIKEKDDRWFSSGRWASAYYDASPAVAKKMEQQLWAEDKVIRVSTRRPSTKMDRIASTHERSNPW 348 +++ + T+ LT + ++ + ++E GG+VRS+ NHG+R P+R +++ R++ GR+ S YYD++P K++E L D+V+RV+ + +K+D I HE+ NP+ Sbjct: 7 VLSTKHTTHFKALTALMKQVSLKVVENGGIVRSIQNHGLRTFPHRFKAKYPDYLTQQRYYEQGRFISIYYDSNPTTLKQVETVLTMNDQVLRVTHLKSRSKLDWINYKHEK-NPY 120
BLAST of mRNA_L-elsbetiae_contig666.15386.1 vs. uniprot
Match: A0A448Z259_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z259_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 1.940e-15 Identity = 35/99 (35.35%), Postives = 61/99 (61.62%), Query Frame = 1 Query: 52 FRRAAAVILEEGGVVRSVANHGIRVLPYRIHSRHDIKEKDDRWFSSGRWASAYYDASPAVAKKMEQQLWAEDKVIRVSTRRPSTKMDRIASTHERSNPW 348 + + ++E GG++RS+ NHG+R P+R +++ R++ GR+ S YYDA+PA KK+E L D+V+RV+ + +K+D I H++ NP+ Sbjct: 1 MKEVSLKVVENGGIIRSIQNHGLRTFPHRFKAKYPDYLTQQRYYEQGRFISVYYDANPATLKKVENILNMNDQVLRVTHLKSRSKLDWINYRHDK-NPY 98
BLAST of mRNA_L-elsbetiae_contig666.15386.1 vs. uniprot
Match: A0A6T7JZ88_9STRA (Hypothetical protein n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A6T7JZ88_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 2.890e-15 Identity = 37/104 (35.58%), Postives = 67/104 (64.42%), Query Frame = 1 Query: 37 DLTNIFRRAAAVILEEGGVVRSVANHGIRVLPYRIHSRHDIKEKDDRWFSSGRWASAYYDASPAVAKKMEQQLWAEDKVIRVSTRRPSTKMDRIASTHERSNPW 348 +LTN+ + + ++E GG+VRSV NHGIR LP+R +++ KE +R++ GR+ S +YDASP ++++ L +++V+R + +P K+ +E+ NP+ Sbjct: 18 NLTNLMKTVSLKVVERGGIVRSVQNHGIRDLPHRFKAKYPDKE-GNRYYKKGRFISVFYDASPHAREEVQAILDLDEEVLRNTHLKPRNKVTYANIVNEKKNPY 120
BLAST of mRNA_L-elsbetiae_contig666.15386.1 vs. uniprot
Match: K0TLA5_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TLA5_THAOC) HSP 1 Score: 77.4 bits (189), Expect = 4.530e-15 Identity = 38/115 (33.04%), Postives = 71/115 (61.74%), Query Frame = 1 Query: 4 IVTLRPRTNPTDLTNIFRRAAAVILEEGGVVRSVANHGIRVLPYRIHSRHDIKEKDDRWFSSGRWASAYYDASPAVAKKMEQQLWAEDKVIRVSTRRPSTKMDRIASTHERSNPW 348 ++T + T+ LT++ + + I+E GG+VRS+ NHGIR LP+R S++ +E +R++ GR+ S +YD++P AK++E L ++++R + R S + + + E NP+ Sbjct: 45 LMTAKNTTHYNLLTSLMKEVSHKIVENGGIVRSIQNHGIRQLPHRFKSKYADRE-GNRYYEKGRFISVFYDSNPVTAKQVETILNLNEEILRNTHLRASNRFNEVNDLLESRNPY 158
BLAST of mRNA_L-elsbetiae_contig666.15386.1 vs. uniprot
Match: A0A7S2MAY0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2MAY0_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 2.260e-13 Identity = 34/118 (28.81%), Postives = 70/118 (59.32%), Query Frame = 1 Query: 4 IVTLRPRTNPTDLTNIFRRAAAVILEEGGVVRSVANHGIRVLPYRIHSRHDIKEKDDRWFSSGRWASAYYDASPAVAKKMEQQLWAEDKVIRVSTRRPSTKMDRIASTHERSNPWDME 357 ++T + + +LT + + + I+ GG+VRS+ NHG+R LP+R +++ +E +R++ GR+ S +YDASP + +++E L +++++R + + K + + E NP+ E Sbjct: 7 LMTAKNTAHYNNLTALMKDISLKIVNNGGIVRSIQNHGVRQLPHRFRAKYADRE-GNRYYEKGRFVSVFYDASPGIMRQVEGILNLDEQILRNTHLKGRNKFMDVNNVREAKNPYIQE 123 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig666.15386.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig666.15386.1 >prot_L-elsbetiae_contig666.15386.1 ID=prot_L-elsbetiae_contig666.15386.1|Name=mRNA_L-elsbetiae_contig666.15386.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=143bp QIVTLRPRTNPTDLTNIFRRAAAVILEEGGVVRSVANHGIRVLPYRIHSRback to top mRNA from alignment at L-elsbetiae_contig666:5939..6698+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig666.15386.1 ID=mRNA_L-elsbetiae_contig666.15386.1|Name=mRNA_L-elsbetiae_contig666.15386.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=760bp|location=Sequence derived from alignment at L-elsbetiae_contig666:5939..6698+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig666:5939..6698+ >mRNA_L-elsbetiae_contig666.15386.1 ID=mRNA_L-elsbetiae_contig666.15386.1|Name=mRNA_L-elsbetiae_contig666.15386.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=858bp|location=Sequence derived from alignment at L-elsbetiae_contig666:5939..6698+ (Laminarionema elsbetiae ELsaHSoW15)back to top |