mRNA_L-elsbetiae_contig6650.15380.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6650.15380.1 vs. uniprot
Match: D8LNK8_ECTSI (Acyl-CoA oxidase (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNK8_ECTSI) HSP 1 Score: 380 bits (977), Expect = 2.750e-127 Identity = 199/259 (76.83%), Postives = 221/259 (85.33%), Query Frame = 1 Query: 1 VRAVIAKNAGKSLAKAATIATRYSILRRQGFREGGKGPGEHQILDYTIQMHRLLPLVAAAFGFHFAGQSLMGRLRILEREHVHGLPPLPGGSXXXXXXXDTLKQFHAASSSLKSMCTGVTAAGIEDCRKACGGHGFLQSSGLPEFLGSYLQSCTVEGENHMLTQQVVRVLLQELSAARKGRAVGADCLYMTRLLNGEG-GKRRCPVTSPKGFRDSVVLEAALEHRAFRLLRRVESRLRRDAEEGGRTSSEAWNRALVEV 774 VR VIAK+AG+SLAKAATIATRYSI+RRQGFREG K EHQ+LDYTIQMHRLLPL+A+A+GFHFAG L RLR LEREHVHGLPPL GG DTLKQFHA SS LK +C+G+TAAGIEDCRKACGGHG+LQSSGLPE LG+YLQSCTVEGENHMLTQQVVRVLLQEL+AAR+ AVG DC YM+RL+ GEG G+RRCPV SPKGFRDSVVLEAALEHRAFRLL RVE+RLR + E G + +EAWN AL+EV Sbjct: 270 VRVVIAKDAGRSLAKAATIATRYSIVRRQGFREGSK---EHQVLDYTIQMHRLLPLIASAYGFHFAGVDLNLRLRRLEREHVHGLPPLAGGKGAG----DTLKQFHATSSCLKGLCSGLTAAGIEDCRKACGGHGYLQSSGLPELLGNYLQSCTVEGENHMLTQQVVRVLLQELAAARQSGAVGNDCAYMSRLVRGEGKGRRRCPVRSPKGFRDSVVLEAALEHRAFRLLVRVEARLRSEREAGS-SPAEAWNLALIEV 520
BLAST of mRNA_L-elsbetiae_contig6650.15380.1 vs. uniprot
Match: A0A6H5K710_9PHAE (ACOX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K710_9PHAE) HSP 1 Score: 321 bits (822), Expect = 9.270e-106 Identity = 163/220 (74.09%), Postives = 184/220 (83.64%), Query Frame = 1 Query: 118 EHQILDYTIQMHRLLPLVAAAFGFHFAGQSLMGRLRILEREHVHGLPPLPGGSXXXXXXXDTLKQFHAASSSLKSMCTGVTAAGIEDCRKACGGHGFLQSSGLPEFLGSYLQSCTVEGENHMLTQQVVRVLLQELSAARKGRAVGADCLYMTRLLNGEG-GKRRCPVTSPKGFRDSVVLEAALEHRAFRLLRRVESRLRRDAEEGGRTSSEAWNRALVEV 774 + +LDYTIQMHRLLPL+A+A+GFHFAG L RLR LEREHVHGLPPL G DTLKQFHA SS LK +C+G+TAAGIEDCRKACGGHG+LQSSGLPE LG+YLQSCTVEGENHMLTQQVVRVLLQEL+AAR+ AVG DC+YM+RL+ GEG G+RRCPV SPKGFRDSVVLEAALEHRAFRLL RVE RLR + E G + +EAWN AL+E+ Sbjct: 5 DRSVLDYTIQMHRLLPLIASAYGFHFAGVDLKLRLRRLEREHVHGLPPLAGEKGAG----DTLKQFHATSSCLKGLCSGLTAAGIEDCRKACGGHGYLQSSGLPELLGTYLQSCTVEGENHMLTQQVVRVLLQELAAARQSGAVGNDCVYMSRLVRGEGKGRRRCPVRSPKGFRDSVVLEAALEHRAFRLLVRVEGRLRMEREAGS-SPAEAWNLALIEI 219
BLAST of mRNA_L-elsbetiae_contig6650.15380.1 vs. uniprot
Match: A0A835YNL1_9STRA (Acyl-coenzyme A oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNL1_9STRA) HSP 1 Score: 213 bits (542), Expect = 3.970e-61 Identity = 134/270 (49.63%), Postives = 166/270 (61.48%), Query Frame = 1 Query: 1 VRAVIAKNAGKSLAKAATIATRYSILRRQGFR-EGGKGP----------GEHQILDYTIQMHRLLPLVAAAFGFHFAGQSLMGRLRILEREHVHGLPPLPGGSXXXXXXXDTLKQFHAASSSLKSMCTGVTAAGIEDCRKACGGHGFLQSSGLPEFLGSYLQSCTVEGENHMLTQQVVRVLLQELSAARKGRAVGADCLYMTRLLNGEGGKRRCPVTSPKGFRDSVVLEAALEHRAFRLLRRVESRLR-RDAEEGGRTSSEAWNRALVEV 774 VRA I + AG LAKA TIA RYS LRRQGF + G GE Q+LDYT+QMHRLLPLVA A+ FH AG+++ RL LE + PG L +FHA+SS LKS+C+ VTA GIEDCRK CGGHG+L +SGLPE LG+YLQ+CTVEGENHMLTQQ V+ LL+ ++A G G DC +++R E RC + + VL AA EHRA RL+ V + +R R A + R + AWN ALVE+ Sbjct: 281 VRAYIVEQAGYCLAKATTIAVRYSALRRQGFAPQAGXXXXXXXXXXXXSGELQVLDYTVQMHRLLPLVATAYAFHSAGRAMQQRLARLE-----AMLDTPGVGA-------ALAEFHASSSGLKSLCSAVTADGIEDCRKCCGGHGYLAASGLPELLGTYLQNCTVEGENHMLTQQTVKHLLKAMAAGGGG---GEDCGHLSRWRPDE----RCCAATQEAMATMPVLMAAFEHRAARLVAGVGALMRARMAADAARDA--AWNGALVEM 529
BLAST of mRNA_L-elsbetiae_contig6650.15380.1 vs. uniprot
Match: A0A7S4IAK9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IAK9_9STRA) HSP 1 Score: 190 bits (483), Expect = 1.700e-53 Identity = 120/266 (45.11%), Postives = 157/266 (59.02%), Query Frame = 1 Query: 1 VRAVIAKNAGKSLAKAATIATRYSILRRQGFREGGKGPGEHQILDYTIQMHRLLPLVAAAFGFHFAGQSLMGRLRILEREHVHGLPPLPGGSXXXXXXXDTLKQFHAASSSLKSMCTGVTAAGIEDCRKACGGHGFLQSSGLPEFLGSYLQSCTVEGENHMLTQQVVRVLL-------QELSAARKGRAVGADCLYMTRLLNGEGGKRR-CPVTSPKGFRDSVVLEAALEHRAFRLLRRVESRLRRDAEEGGRTSSEAWNRALVEV 774 VRA I +AGK LAKA T++ RYS +R+QGF E G+ E QILDY Q HRLLPL+A +F F + G++L+ RLR +E V G G+ D HA+SS+LKS+ T + A GIEDCRKACGGHGFL SGL E + +YLQ+ TVEG+NHML QQV++VLL Q+ ARK A + + GK++ CP + R VL +A HR+ RLL V S ++ D G++ EAWN A V + Sbjct: 118 VRAFIVNDAGKQLAKACTVSIRYSAVRKQGFDESGQR--ETQILDYRQQQHRLLPLLATSFCFFYTGRTLLQRLRDIEERLVTGK-----GAVTKIDVSD----LHASSSALKSLTTMIAADGIEDCRKACGGHGFLHCSGLTELVTTYLQNPTVEGDNHMLPQQVIKVLLKLVMAVQQDAGKARKVYASSTSSYLIPEIAAIAAGKKKTCPASDEGAMRHIDVLLSAYRHRSARLLFDVASAIQ-DGVASGKSMQEAWNDAQVRM 371
BLAST of mRNA_L-elsbetiae_contig6650.15380.1 vs. uniprot
Match: A0A7S2UKD5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UKD5_9STRA) HSP 1 Score: 184 bits (468), Expect = 2.870e-51 Identity = 117/270 (43.33%), Postives = 152/270 (56.30%), Query Frame = 1 Query: 1 VRAVIAKNAGKSLAKAATIATRYSILRRQGFREGGKGPGEHQILDYTIQMHRLLPLVAAAFGFHFAGQSLMGRLRILEREHVHGLPPLPGGSXXXXXXXDTLKQFHAASSSLKSMCTGVTAAGIEDCRKACGGHGFLQSSGLPEFLGSYLQSCTVEGENHMLTQQVVRVLLQELSAARKGRAVG------ADCLYMTRLLNGEGGKRR------CPVTSPKGFRDSVVLEAALEHRAFRLLRRVESRLRRDAEEGGRTSSEAWNRALVEV 774 VRA I AGK+LA A T++ RYS +RRQGFR E QI+DY Q HRL PL+AA++ F F G+ ++ +L+ LE + G G+ D HA+SS+LKS T VTA GIEDCRKACGGHGFLQSSGLPE +YLQS TVEG+NHML QQVV+VLL+ + + D Y+ L R+ C TS R +L L+HR+ RLL V +L G ++ +AWN AL+++ Sbjct: 134 VRAHIVNEAGKNLALACTMSIRYSAVRRQGFRNDSDKQ-EIQIIDYRQQQHRLFPLLAASYCFFFTGRKILAQLKALEERMLSG-----SGTVTKAQVAD----IHASSSALKSFTTTVTADGIEDCRKACGGHGFLQSSGLPELSLTYLQSPTVEGDNHMLPQQVVKVLLKLVQMVQSNNEAALAEYDMCDSKYLIEPLRAMLSHRKHQNKPSCSATSRVEMRQLPILLKTLQHRSARLLLEVAQQLESSVRAGA-SAEQAWNDALIQM 392
BLAST of mRNA_L-elsbetiae_contig6650.15380.1 vs. uniprot
Match: A0A448YU70_9STRA (Acyl-coenzyme A oxidase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YU70_9STRA) HSP 1 Score: 187 bits (475), Expect = 3.620e-51 Identity = 114/263 (43.35%), Postives = 150/263 (57.03%), Query Frame = 1 Query: 1 VRAVIAKNAGKSLAKAATIATRYSILRRQGFREGGKGPGEHQILDYTIQMHRLLPLVAAAFGFHFAGQSLMGRLRILEREHVHGLPPLPGGSXXXXXXXDTLKQFHAASSSLKSMCTGVTAAGIEDCRKACGGHGFLQSSGLPEFLGSYLQSCTVEGENHMLTQQVVRVLLQELSAARKGRAV-------GADCLYMTRLLNGEGGKRRCPVTSPKGFRDSVVLEAALEHRAFRLLRRVESRLRRDAEEGGRTSSEAWNRALV 768 VR++I A K L A I RYS +R+QGF GK E+Q+LDYT Q HR+ PL+A ++ F+G+ L L+ +E + + P + + HA+SS+LKS T +TA GIE+CRKACGGHGFLQSSGLPE +YLQS TVEG+NHML QQVVRVLL+ + A + + V D + R + G K +C + K D L A HRA RLL V S++ +D E G +AWN ALV Sbjct: 331 VRSIIVVGAAKCLGMACVINIRYSAVRKQGFAADGKT--ENQVLDYTQQQHRIFPLLAFSYCTFFSGRRLAKELKAMEDKLIASKP----------VRKEDVSDVHASSSALKSFTTMITADGIEECRKACGGHGFLQSSGLPELFTTYLQSPTVEGDNHMLPQQVVRVLLKVVQAVKTNKGVENFKNCNSYDLVPSLRAIL-SGRKEQCSAINAKDLCDLPKLLVAFRHRAARLLVVVASQMNKDIAENGTEPQQAWNNALV 580
BLAST of mRNA_L-elsbetiae_contig6650.15380.1 vs. uniprot
Match: A0A7S3LH98_9STRA (Acyl-coenzyme A oxidase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LH98_9STRA) HSP 1 Score: 186 bits (472), Expect = 6.890e-51 Identity = 115/264 (43.56%), Postives = 157/264 (59.47%), Query Frame = 1 Query: 1 VRAVIAKNAGKSLAKAATIATRYSILRRQGFREGGKGPGEHQILDYTIQMHRLLPLVAAAFGFHFAGQSLMGRLRILEREHVHGLPPLPGGSXXXXXXXDTLKQFHAASSSLKSMCTGVTAAGIEDCRKACGGHGFLQSSGLPEFLGSYLQSCTVEGENHMLTQQVVRVLLQELSAARKGRAVGA--DC----LYMTRLLNGEGGKRRCPVTSPKGFRDSVVLEAALEHRAFRLLRRVESRLRRDAEEGGRTSSEAWNRALVEV 774 VRA I +NAG SL KA T+A RYS +RRQGF+E G+ E Q+LDY Q HRL PL+A+++ F F G+ ++ RL+ +E + P + HA+SSSLKS T V A GIEDCRKACGGHG+LQSSGLPE + +YL + TVEG+NHML QQVV+VLL+ + A G + + C L + + G K P + K ++ VL A HRA RLL ++++ +G ++ EAWN LV++ Sbjct: 302 VRAYICENAGHSLGKACTVAIRYSAVRRQGFKEDGET--EVQVLDYKQQQHRLFPLLASSYCFFFTGKKILERLKDIELRFLTEKPVTKA----------EVTDIHASSSSLKSFTTTVAADGIEDCRKACGGHGYLQSSGLPELVTTYLMNPTVEGDNHMLPQQVVKVLLKLVQAVASGDDLTSYEKCDSFDLIASLMTIFSGKKEVFPARTSKEILNTDVLLRAFRHRAARLLAECAEQMQQYTMDG-KSPQEAWNDGLVQM 552
BLAST of mRNA_L-elsbetiae_contig6650.15380.1 vs. uniprot
Match: A0A7S2E652_9STRA (Acyl-coenzyme A oxidase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E652_9STRA) HSP 1 Score: 182 bits (461), Expect = 3.540e-49 Identity = 118/272 (43.38%), Postives = 154/272 (56.62%), Query Frame = 1 Query: 1 VRAVIAKNAGKSLAKAATIATRYSILRRQGFR-----EGGKGPGEHQILDYTIQMHRLLPLVAAAFGFHFAGQSLMGRLRILEREHVHGLPPLPGGSXXXXXXXDTLKQFHAASSSLKSMCTGVTAAGIEDCRKACGGHGFLQSSGLPEFLGSYLQSCTVEGENHMLTQQVVRVLLQELSAARKG------RAVGADCLYM----TRLLNGEG-GKRRCPVTSPKGFRDSVVLEAALEHRAFRLLRRVESRLRRDAEEGGRTSSEAWNRALV 768 VRA I AG SLA A TI RYS +RRQG+ E G+ E Q++DY Q HRL PL+AA++ F F G+ L+ +L ++E+ V G G D HA+SSSLKS T V A GIEDCRKACGGHGFLQSSGLPE SYLQ+ TVEG+N+ML QQV +VLL+ + ++G + D Y+ T ++ G + P S K +D VL A HR+ R+L +++ +D G+T AWN ALV Sbjct: 324 VRAYIVDRAGLSLAMACTITIRYSAVRRQGYDGDHTPEDGEKQKELQVIDYRQQQHRLFPLLAASYCFFFTGKLLLHKLEMMEQALVSGK-----GDITKTEVADV----HASSSSLKSFTTTVAADGIEDCRKACGGHGFLQSSGLPELFTSYLQNPTVEGDNYMLPQQVTKVLLKIVQTVQEGDEDEIAKYNKCDSAYLIAPLTAMIKARGKSTEQFPAKSEKDIQDFDVLLHAFRHRSARMLLEAAAQINKDVS-SGKTFQTAWNDALV 585
BLAST of mRNA_L-elsbetiae_contig6650.15380.1 vs. uniprot
Match: B7FXZ0_PHATC (Acyl-coenzyme A oxidase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FXZ0_PHATC) HSP 1 Score: 181 bits (459), Expect = 4.900e-49 Identity = 119/264 (45.08%), Postives = 153/264 (57.95%), Query Frame = 1 Query: 1 VRAVIAKNAGKSLAKAATIATRYSILRRQGFREGGKGPGEHQILDYTIQMHRLLPLVAAAFGFHFAGQSLMGRLRILEREHVHGLPPLPGGSXXXXXXXDTLKQFHAASSSLKSMCTGVTAAGIEDCRKACGGHGFLQSSGLPEFLGSYLQSCTVEGENHMLTQQVVRVLLQELSAARK----GRAVGADCLYMTRLL--NGEGGKRRCPVTSPKGFRDSVVLEAALEHRAFRLLRRVESRLRRDAEEGGRTSSEAWNRALVEV 774 VRA I AGK+LA A TI TRYS LRRQG+ G+ E QILDY Q HR+ PL+AA++ F F G+ +M +L+ +E + V + HA+SS+LKS T V A GIEDCRKACGGHGFLQ SGLPE + +YLQS TVEG+N ML QQVV+VLL+ + + V D + L N +G K C + S + L AAL HR+ RLL V S+++ G++ EAWN ALVE+ Sbjct: 302 VRAHICNEAGKNLAVACTIVTRYSALRRQGYASDGES--ELQILDYKQQQHRVFPLIAASYCFFFTGKRVMEQLKDIEDKLVSN----------KSISKAAVTDIHASSSALKSFTTTVAADGIEDCRKACGGHGFLQCSGLPELITTYLQSPTVEGDNQMLPQQVVKVLLKLVQTVQDDGDLSDYVSCDSYGLISSLQSNLKGVKEDCRIVSEIDVMNLDALLAALCHRSARLLVGVASQIQGSIS-SGKSYQEAWNDALVEM 552
BLAST of mRNA_L-elsbetiae_contig6650.15380.1 vs. uniprot
Match: A0A6U0E7H6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A6U0E7H6_9STRA) HSP 1 Score: 176 bits (445), Expect = 3.800e-48 Identity = 116/273 (42.49%), Postives = 157/273 (57.51%), Query Frame = 1 Query: 1 VRAVIAKNAGKSLAKAATIATRYSILRRQGF------REGGKGPGEHQILDYTIQMHRLLPLVAAAFGFHFAGQSLMGRLRILEREHVHGLPPLPGGSXXXXXXXDTLKQFHAASSSLKSMCTGVTAAGIEDCRKACGGHGFLQSSGLPEFLGSYLQSCTVEGENHMLTQQVVRVLLQELSAARKG------RAVGADCLYMTR----LLNGEGGKR-RCPVTSPKGFRDSVVLEAALEHRAFRLLRRVESRLRRDAEEGGRTSSEAWNRALV 768 VR+ I AG +LA A T++ RYS +R+QGF + GK E QI+DY Q HRL PL+AA++ F F G+ L+ +L+I+E+ V G + + + HA+SSSLKS T +TA GIE+CRKACGGHGFLQSSGLPE +YLQ+ TVEG+N+ML QQV++VLL+ + A + G + D Y+ + GE K + + K D VL A HR+ R+L V +L +D GRT AWN ALV Sbjct: 99 VRSFIVDAAGMNLAMACTVSIRYSAVRKQGFDADDNTNKDGK-QREVQIIDYRQQQHRLFPLLAASYCFFFTGKRLLHQLQIMEQSLVSGQGDIT---------KEEVADVHASSSSLKSFTTMITADGIEECRKACGGHGFLQSSGLPELATTYLQNPTVEGDNYMLPQQVIKVLLKLVQAVQSGDEEEISKYQKCDSSYLISPLQTIFTGENTKPDQFLAKTEKDVEDLNVLLHAFSHRSARMLVEVAKQLNKDLT-SGRTMQTAWNDALV 360 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6650.15380.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6650.15380.1 >prot_L-elsbetiae_contig6650.15380.1 ID=prot_L-elsbetiae_contig6650.15380.1|Name=mRNA_L-elsbetiae_contig6650.15380.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=258bp VRAVIAKNAGKSLAKAATIATRYSILRRQGFREGGKGPGEHQILDYTIQMback to top mRNA from alignment at L-elsbetiae_contig6650:1352..5287- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6650.15380.1 ID=mRNA_L-elsbetiae_contig6650.15380.1|Name=mRNA_L-elsbetiae_contig6650.15380.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3936bp|location=Sequence derived from alignment at L-elsbetiae_contig6650:1352..5287- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6650:1352..5287- >mRNA_L-elsbetiae_contig6650.15380.1 ID=mRNA_L-elsbetiae_contig6650.15380.1|Name=mRNA_L-elsbetiae_contig6650.15380.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1548bp|location=Sequence derived from alignment at L-elsbetiae_contig6650:1352..5287- (Laminarionema elsbetiae ELsaHSoW15)back to top |