mRNA_L-elsbetiae_contig6640.15370.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6640.15370.1
Unique NamemRNA_L-elsbetiae_contig6640.15370.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6640.15370.1 vs. uniprot
Match: D7FQE5_ECTSI (AP complex subunit sigma n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQE5_ECTSI)

HSP 1 Score: 363 bits (933), Expect = 5.040e-127
Identity = 182/187 (97.33%), Postives = 183/187 (97.86%), Query Frame = 1
Query:    1 MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQNRLHAASNKVGLPPSGGISVHGRPSGGVGGGVPSGIPGMRTR 561
            MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVD+QESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQIL AINDQNRLHAASNKVGLPPSGGIS HGRPSGGVGGG  SGIPGMRTR
Sbjct:    1 MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDSQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILLAINDQNRLHAASNKVGLPPSGGISAHGRPSGGVGGGGSSGIPGMRTR 187          
BLAST of mRNA_L-elsbetiae_contig6640.15370.1 vs. uniprot
Match: A0A835ZDS3_9STRA (AP complex subunit sigma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDS3_9STRA)

HSP 1 Score: 281 bits (720), Expect = 1.110e-94
Identity = 133/157 (84.71%), Postives = 150/157 (95.54%), Query Frame = 1
Query:    1 MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQNRLHAASNKVGL 471
            MI+ V+IVNNHGKPRLVKFY+TV  E+AQ+SVI+RIFQQVAQRPD+FCNYLEG IPEWGEGTKLIYRHYATLYF+FAVD+QESDLGILDL+QVFVEALDKCFENVCELDLIFHSD+VHYVLDE+IMGGMVLETNIN +L+A+NDQ++LHAAS KV L
Sbjct:    1 MIKAVVIVNNHGKPRLVKFYKTVTDEDAQQSVIRRIFQQVAQRPDNFCNYLEGSIPEWGEGTKLIYRHYATLYFIFAVDSQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDRVHYVLDEMIMGGMVLETNINAVLSAVNDQSKLHAASMKVQL 157          
BLAST of mRNA_L-elsbetiae_contig6640.15370.1 vs. uniprot
Match: W7T2Y9_9STRA (AP complex subunit sigma n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T2Y9_9STRA)

HSP 1 Score: 278 bits (711), Expect = 2.520e-93
Identity = 134/154 (87.01%), Postives = 143/154 (92.86%), Query Frame = 1
Query:    1 MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQNRLHAASNK 462
            MIRGVIIVNNHG+PRLVK YQ+V+GEEAQ+SVI+++FQQVAQRPDSFCNYL+G IPEWGEG KLIYRHYATLYFVFAVD QESDLGILDL+QVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIM GMVLETNI  IL  INDQNRLHA S K
Sbjct:    1 MIRGVIIVNNHGRPRLVKLYQSVIGEEAQQSVIRKVFQQVAQRPDSFCNYLDGSIPEWGEGVKLIYRHYATLYFVFAVDQQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMAGMVLETNIIHILQVINDQNRLHAQSQK 154          
BLAST of mRNA_L-elsbetiae_contig6640.15370.1 vs. uniprot
Match: A0A6S8ZKR8_9STRA (AP complex subunit sigma n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZKR8_9STRA)

HSP 1 Score: 271 bits (693), Expect = 1.340e-90
Identity = 126/152 (82.89%), Postives = 141/152 (92.76%), Query Frame = 1
Query:    1 MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQNRLHAAS 456
            MI+G++IVNNHGKPRLVKFYQ+V  EE Q+SVI+R+FQQVAQRPDSFCNYLEGIIPEWG   KLIYRHYATLYFVFAVD+QESDLGILDL+QVFVEALDKCFENVCELDLIFHSD+VHYVLDEI+MGGMVLETNIN +L AI DQ ++H +S
Sbjct:    1 MIKGILIVNNHGKPRLVKFYQSVTSEETQQSVIRRVFQQVAQRPDSFCNYLEGIIPEWGSNIKLIYRHYATLYFVFAVDSQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDRVHYVLDEIVMGGMVLETNINSVLQAIGDQTKMHKSS 152          
BLAST of mRNA_L-elsbetiae_contig6640.15370.1 vs. uniprot
Match: A0A7R9U773_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U773_9STRA)

HSP 1 Score: 266 bits (680), Expect = 2.210e-88
Identity = 132/170 (77.65%), Postives = 145/170 (85.29%), Query Frame = 1
Query:    1 MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQNRLHAASNKVGLPPSGGISVHGRPS 510
            MI+ VI+VNNHGK RLVKFYQ V    AQ+SVI+R+FQQV QRPDSFCNYLEG +PEWG+  KLIYRHYATLYFVFAVD+QESDLGILDL+QVFVEALDKCFENVCELDLIFHSD+VHYVLDEIIM GMVLETNI  IL AINDQ+R+H ASNK   P +G     GRPS
Sbjct:   14 MIKAVIVVNNHGKARLVKFYQNVDSVSAQQSVIRRVFQQVGQRPDSFCNYLEGSVPEWGDDVKLIYRHYATLYFVFAVDSQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDRVHYVLDEIIMAGMVLETNIVNILQAINDQHRMHMASNKA-QPGTGNAVGRGRPS 182          
BLAST of mRNA_L-elsbetiae_contig6640.15370.1 vs. uniprot
Match: A0A7S2P852_9STRA (AP complex subunit sigma n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P852_9STRA)

HSP 1 Score: 265 bits (678), Expect = 2.580e-88
Identity = 127/164 (77.44%), Postives = 143/164 (87.20%), Query Frame = 1
Query:    1 MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQNRLHAASNKVGLPPSGGIS 492
            MI+GVIIVNN GKPRL KFYQ+V  EE Q+ VI+R+F+Q++ RPD+FCNYLEGI+PEWG   KLIYRHYATLYFVFAVDAQESDLGILDL+QVFVEALDKCFENVCELDLIFHSDKVHYVLDEI+MGGMVLETNI  IL AI DQ +LHAAS K  +  + G+S
Sbjct:    1 MIKGVIIVNNQGKPRLAKFYQSVTSEEIQQRVIRRVFEQISSRPDNFCNYLEGIVPEWGSNIKLIYRHYATLYFVFAVDAQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIVMGGMVLETNIASILQAIQDQGKLHAASLKAKVDKTDGLS 164          
BLAST of mRNA_L-elsbetiae_contig6640.15370.1 vs. uniprot
Match: B5YNE9_THAPS (AP complex subunit sigma n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YNE9_THAPS)

HSP 1 Score: 263 bits (671), Expect = 2.810e-87
Identity = 125/154 (81.17%), Postives = 139/154 (90.26%), Query Frame = 1
Query:    1 MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQNRLHAASNK 462
            MI+G+IIVNN GKPRLVKFYQ V GE+ Q+SVI+R+FQQV+ RPDSFCNYLEG +PEWGE  KLIYRHYATLYFVFAVD+QESDLGILDL+QVFVEALDK FENVCELDLIFHSD+VHY+LDEI+MGGMVLETNIN IL AINDQ R+H  S K
Sbjct:    1 MIKGIIIVNNSGKPRLVKFYQNVFGEQRQQSVIRRVFQQVSTRPDSFCNYLEGSVPEWGENIKLIYRHYATLYFVFAVDSQESDLGILDLIQVFVEALDKRFENVCELDLIFHSDRVHYILDEIVMGGMVLETNINSILQAINDQERMHNESMK 154          
BLAST of mRNA_L-elsbetiae_contig6640.15370.1 vs. uniprot
Match: A0A8J9T0F8_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9T0F8_PHATR)

HSP 1 Score: 258 bits (660), Expect = 5.690e-86
Identity = 120/149 (80.54%), Postives = 135/149 (90.60%), Query Frame = 1
Query:    1 MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQNRLH 447
            MI+G+IIVNNHGKPRLVKFYQ V  E  Q+SVI+R+FQQVA RPDSFCNYLEGI+PEWG+  KLIYRHYATLYFVFAVD QESDLGILDL+QVFVEALDKCFENVCELDLIFHSD+VHY+LDEI+MGGMVLETNI  +L +I DQ ++H
Sbjct:    1 MIKGIIIVNNHGKPRLVKFYQNVESEALQQSVIRRVFQQVAARPDSFCNYLEGIVPEWGDHIKLIYRHYATLYFVFAVDQQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDRVHYILDEIVMGGMVLETNIQGVLQSIKDQGKIH 149          
BLAST of mRNA_L-elsbetiae_contig6640.15370.1 vs. uniprot
Match: A0A1Z5JTJ4_FISSO (AP complex subunit sigma n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JTJ4_FISSO)

HSP 1 Score: 258 bits (660), Expect = 1.570e-85
Identity = 120/152 (78.95%), Postives = 139/152 (91.45%), Query Frame = 1
Query:    1 MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQNRLHAAS 456
            MI+G+IIVNNHGKPRLVKFYQ+V  E  Q+SVI+R+FQQVA RPDSFCNYLEG IPEWG+  KLIYRHYATL+FVFAVD+QESDLGILDL+QVFVE+LD+CFE+VCELDLIFHSD+VHYVLDEI+MGGMVLETNI+ +L A+ DQ+RLH  S
Sbjct:    1 MIKGIIIVNNHGKPRLVKFYQSVESESLQQSVIRRVFQQVAARPDSFCNYLEGAIPEWGDNIKLIYRHYATLFFVFAVDSQESDLGILDLIQVFVESLDRCFESVCELDLIFHSDRVHYVLDEIVMGGMVLETNIHSVLQAVKDQDRLHKDS 152          
BLAST of mRNA_L-elsbetiae_contig6640.15370.1 vs. uniprot
Match: K0SBT8_THAOC (Clat_adaptor_s domain-containing protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SBT8_THAOC)

HSP 1 Score: 261 bits (668), Expect = 2.270e-84
Identity = 127/158 (80.38%), Postives = 140/158 (88.61%), Query Frame = 1
Query:    1 MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQNRLHAASNKVGLP 474
            MI+G+IIVNN GKPRLVKFYQ V GEE Q+SVI+R+FQQV+ RPDSFCNYLEG +PEWGE  KLIYRHYATLYFVFAVDAQESDLGILDL+QVFVEALDK FENVCELDLIFHSDKVH++LDEI+MGGMVLETNIN IL AI+DQ R+H  S K   P
Sbjct:  174 MIKGIIIVNNSGKPRLVKFYQNVFGEEKQQSVIRRVFQQVSTRPDSFCNYLEGSVPEWGEKCKLIYRHYATLYFVFAVDAQESDLGILDLIQVFVEALDKRFENVCELDLIFHSDKVHHILDEIVMGGMVLETNINAILQAISDQERMHKDSMKTKGP 331          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6640.15370.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQE5_ECTSI5.040e-12797.33AP complex subunit sigma n=2 Tax=Ectocarpus TaxID=... [more]
A0A835ZDS3_9STRA1.110e-9484.71AP complex subunit sigma n=1 Tax=Tribonema minus T... [more]
W7T2Y9_9STRA2.520e-9387.01AP complex subunit sigma n=2 Tax=Monodopsidaceae T... [more]
A0A6S8ZKR8_9STRA1.340e-9082.89AP complex subunit sigma n=1 Tax=Ditylum brightwel... [more]
A0A7R9U773_9STRA2.210e-8877.65Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2P852_9STRA2.580e-8877.44AP complex subunit sigma n=1 Tax=Leptocylindrus da... [more]
B5YNE9_THAPS2.810e-8781.17AP complex subunit sigma n=1 Tax=Thalassiosira pse... [more]
A0A8J9T0F8_PHATR5.690e-8680.54Hypothetical protein (Fragment) n=2 Tax=Phaeodacty... [more]
A0A1Z5JTJ4_FISSO1.570e-8578.95AP complex subunit sigma n=2 Tax=Fistulifera solar... [more]
K0SBT8_THAOC2.270e-8480.38Clat_adaptor_s domain-containing protein n=2 Tax=T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6640contigL-elsbetiae_contig6640:757..3449 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score365.2
Seed ortholog evalue1.9e-98
Seed eggNOG ortholog2880.D7FQE5
Preferred nameAP3S1
KEGG koko:K10436,ko:K12399
KEGG Pathwayko04142,map04142
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005802,GO:0006605,GO:0006623,GO:0006725,GO:0006726,GO:0006727,GO:0006810,GO:0006886,GO:0006892,GO:0006896,GO:0006928,GO:0006996,GO:0007017,GO:0007018,GO:0007033,GO:0007034,GO:0007040,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0008055,GO:0008088,GO:0008089,GO:0008104,GO:0008150,GO:0008152,GO:0008286,GO:0008565,GO:0009058,GO:0009405,GO:0009719,GO:0009725,GO:0009987,GO:0010033,GO:0010243,GO:0010970,GO:0012505,GO:0012506,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016192,GO:0018130,GO:0019438,GO:0019748,GO:0023052,GO:0030117,GO:0030119,GO:0030123,GO:0030133,GO:0030659,GO:0030705,GO:0031090,GO:0031410,GO:0031982,GO:0031984,GO:0032868,GO:0032869,GO:0032870,GO:0032991,GO:0033036,GO:0033060,GO:0033365,GO:0034613,GO:0042221,GO:0042440,GO:0042441,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043324,GO:0043434,GO:0043473,GO:0043474,GO:0044237,GO:0044249,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0044550,GO:0045184,GO:0046148,GO:0046152,GO:0046158,GO:0046483,GO:0046907,GO:0047496,GO:0048066,GO:0048069,GO:0048072,GO:0048193,GO:0048475,GO:0048489,GO:0048490,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051704,GO:0051716,GO:0065007,GO:0070727,GO:0070887,GO:0071310,GO:0071375,GO:0071417,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072384,GO:0072594,GO:0072665,GO:0072666,GO:0080171,GO:0097479,GO:0097480,GO:0097708,GO:0098791,GO:0098796,GO:0098930,GO:0099003,GO:0099111,GO:0099514,GO:0099517,GO:0099518,GO:1901360,GO:1901362,GO:1901576,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701
EggNOG free text desc.protein transport
EggNOG OGsCOG5030@1,KOG0936@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036,ko04131,ko04812
Ec32 ortholog descriptionClathrin assembly complex, small subunit
Ec32 orthologEc-01_006410.1
Exons4
Model size564
Cds size564
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6640.15370.1prot_L-elsbetiae_contig6640.15370.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6640 757..3449 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816735.6277084-CDS-L-elsbetiae_contig6640:756..8251622816735.6277084-CDS-L-elsbetiae_contig6640:756..825Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6640 757..825 +
1691683775.0141008-CDS-L-elsbetiae_contig6640:756..8251691683775.0141008-CDS-L-elsbetiae_contig6640:756..825Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6640 757..825 +
1622816735.6436086-CDS-L-elsbetiae_contig6640:1802..20101622816735.6436086-CDS-L-elsbetiae_contig6640:1802..2010Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6640 1803..2010 +
1691683775.0258882-CDS-L-elsbetiae_contig6640:1802..20101691683775.0258882-CDS-L-elsbetiae_contig6640:1802..2010Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6640 1803..2010 +
1622816735.6553006-CDS-L-elsbetiae_contig6640:2719..27901622816735.6553006-CDS-L-elsbetiae_contig6640:2719..2790Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6640 2720..2790 +
1691683775.0350592-CDS-L-elsbetiae_contig6640:2719..27901691683775.0350592-CDS-L-elsbetiae_contig6640:2719..2790Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6640 2720..2790 +
1622816735.670098-CDS-L-elsbetiae_contig6640:3233..34491622816735.670098-CDS-L-elsbetiae_contig6640:3233..3449Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6640 3234..3449 +
1691683775.0439823-CDS-L-elsbetiae_contig6640:3233..34491691683775.0439823-CDS-L-elsbetiae_contig6640:3233..3449Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6640 3234..3449 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6640.15370.1

>prot_L-elsbetiae_contig6640.15370.1 ID=prot_L-elsbetiae_contig6640.15370.1|Name=mRNA_L-elsbetiae_contig6640.15370.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=188bp
MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKSVIQRIFQQVAQRPDSFCNY
LEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDK
CFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQNRLHA
ASNKVGLPPSGGISVHGRPSGGVGGGVPSGIPGMRTR*
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mRNA from alignment at L-elsbetiae_contig6640:757..3449+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6640.15370.1 ID=mRNA_L-elsbetiae_contig6640.15370.1|Name=mRNA_L-elsbetiae_contig6640.15370.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2693bp|location=Sequence derived from alignment at L-elsbetiae_contig6640:757..3449+ (Laminarionema elsbetiae ELsaHSoW15)
ATGATTCGAGGAGTAATCATCGTCAACAACCATGGAAAGCCTCGTCTGGT GAAATTTTATCAAACAGTGGTGAGCGGAGTATGTATCTAGTTATCTACTT TATTTTTTATTTTTTTGAAACATCATCGATCGATAAATATGCGGAACAAA AGCGCCACACATCGTGCTAGCCCTAGTCCCAGTTGTGCACGCACGGCATT CTTCACCTCTCTCTCCTCTTGTTGCCGGCGGAGAGAGGGTTGCACTCGAA AATGGCCGGTGCCTTGGAGAGTCGACTGCCTCGTTTAACATACTCTCTTG TCTACTTCAAAGGTATAAGCTGCGAGACTGGAGAACATGTAGGTTCTACT CCGTACCTAGATGGATATTATGTAGATGATCACCTGCACCCCTGTAGTCT AGTAGTGACATGATCCTGGCTGTGCACGCCCCCCCCCCCCCCCCCCCCCC CCCCACCCGCGCCCCCCCCCCCCCCCCCCCCCCCCTTTCTCCTTTTTTTG GGGTGGGGTGGGGGGGTGGAGGATACCACAACNNNNNNNNNNTTACCCCG TACCAAAATGGTAATTTTGTAATGTGTCCCCGGCCCCCCCTTAGTCTGGT AGGGCCATTTCCCGGGCGGGGCCCCCCCCCCCCCCCCCCAACCGAACGCT GGTGCCGCCTTGGGCCCTGCTTCAGCGAATTTCCATGGGTTGGTCTGCTC GTGGCGGAACTATGATCCCAAATCTCATTGGTACGGCCTTTTTGACCAAA AGTCGTTCATCGTCACCGGACTCCTACGTTGTGTCTACTTACACATCTAG TCCAGGTGTCGATATACTACGTACAGCTGTAGATAACGGCACAGCAGTCT ATTTACATACGTAGATATCTAGATATATCAATGCGTTACGGAGCAATTCT GACTGTTGATAGGCGGGTGTGTCTGCTGTCCTCATCTACTCCCAGTGTGT ACCAACGCCCAAGCTACCTACGCACACGCACACGTTTGCGGCGAAACGCC CTGTTTCCCCCCACAAACCCGAGCCCGAATTATTTCGACCGAGCAGGTCG GCGAAGAGGCGCAGAAAAGCGTGATACAGCGCATCTTTCAGCAGGTGGCG CAGCGGCCGGACTCGTTCTGCAACTACTTGGAAGGGATCATTCCGGAGTG GGGAGAGGGGACGAAACTCATCTACCGGCACTACGCCACGCTCTACTTCG TTTTCGCCGTGGATGCACAAGAGAGCGATCTCGGCATCCTCGACCTCGTT CAGGGTAAGATTCAGAGTTGATACGCTTCGGTGGTAGTTGTTCTGTTGTG CTTACAACTGTTTTTGTCTGTCGCATCGTCAGCGTAGCCAAGGCAGCATA GCCAGGGTTTACGCTGTAAGGTCGCTTGCTTTTGCGCGTAATCGATGTGT CGTTTGAGTACGTGCATTCGGGCTTTGGTTTGCTTAAATACGAGTCTCCG TATAGCTCTTGATGCGCTCTTACCCCACGAGGCATGCGGGCTTCTGAAAG AGCCACCCGATTGCAGTGAGCACGTCAGCACATTTGAAGCCCGCACGAAA GGGACATTTTCTTGTGCTGAACGTGGTTGCTGCAATCCTCGCGCACAGAG TTTGAAGAGTGCACAGCACGGTTTGTGTCTGAAACATGTGGACTTGATCG GTTAGTACTCCGCGGAACGTTGTTGGATGTTATGTTGTCTGTTTCGTTTG AAACGCTCGTCTTTTCTCACTCGCTGTGATCTAGACGTCTACCCCCACCT CTATTGCAGTTCTTACTTAATCGGTCCACACAGTAGTATGTGCTCTTGTA TGGTTCGCTGCTCCGCTTGCTGGCGATCTTGGCGCACAAGACGAGACAAC GTGCTTTTCTGGACCATGCTTTCTTTCTCATGCCTTATCCTTTCCACGCG CTGTATCATCACACATCACTTCGCTCGGCAACTTTCCATCGTATGTTATC ATCCTGCCTGCAGTCTTTGTGGAGGCGCTAGACAAGTGCTTCGAGAACGT GTGCGAGTTAGACCTCATCTTTCACTCCGACAAGGTACTACTGAGCCGCG GAAACGGGTCTCGCTTATTGTTGCTGGCGAGCTGCCGTGTGCTTTTGTTC TTGGTGTGGTGGTGCTTACCATCGTGTACATACATCTCGTTCTAGAACCC AGAAAATCACAATCGCGGAGGCGTCTTTCTTTGGATATGATCGAGATGCA GCCTGCACGAACCTTGTCCTATGCCCTCGTTGCACCGAAGCGTTGCCGCT CGGTTCCGCCCCACCTTTGGAAATATCGCGTAGTCCTTTCGCTCCTGTCG TCCCGCTCGTCCAACTCGAGGCGAATCTAGAGCCTCTCTTCCACCCGCAC TTGAAGAACCTTCACGGACGGTGACTCGTCGTGTAAATCAGCAGCCTGTT GTGAGTTCCATCATTGACTGCCCAGACTATCAGCCTTACAGCACCTTCCC ACCCGCTTCCTGCTCTACCTGCGCAAGGTTCATTACGTCCTCGACGAGAT CATCATGGGCGGCATGGTTCTCGAGACCAACATCAACCAAATCCTGACCG CGATCAACGACCAAAACCGCCTCCACGCCGCCTCGAACAAGGTCGGCCTT CCCCCTTCGGGCGGCATCAGTGTCCACGGCAGGCCTTCCGGTGGGGTCGG GGGCGGCGTACCCTCGGGGATTCCTGGCATGCGAACAAGATGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6640:757..3449+

>mRNA_L-elsbetiae_contig6640.15370.1 ID=mRNA_L-elsbetiae_contig6640.15370.1|Name=mRNA_L-elsbetiae_contig6640.15370.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1128bp|location=Sequence derived from alignment at L-elsbetiae_contig6640:757..3449+ (Laminarionema elsbetiae ELsaHSoW15)
ATGATTCGAGGAGTAATCATCGTCAACAACCATGGAAAGCCTCGTCTGGT
GAAATTTTATCAAACAGTGATGATTCGAGGAGTAATCATCGTCAACAACC
ATGGAAAGCCTCGTCTGGTGAAATTTTATCAAACAGTGGTCGGCGAAGAG
GCGCAGAAAAGCGTGATACAGCGCATCTTTCAGCAGGTGGCGCAGCGGCC
GGACTCGTTCTGCAACTACTTGGAAGGGATCATTCCGGAGTGGGGAGAGG
GGACGAAACTCATCTACCGGCACTACGCCACGCTCTACTTCGTTTTCGCC
GTGGATGCACAAGAGAGCGATCTCGGCATCCTCGACCTCGTTCAGGGTCG
GCGAAGAGGCGCAGAAAAGCGTGATACAGCGCATCTTTCAGCAGGTGGCG
CAGCGGCCGGACTCGTTCTGCAACTACTTGGAAGGGATCATTCCGGAGTG
GGGAGAGGGGACGAAACTCATCTACCGGCACTACGCCACGCTCTACTTCG
TTTTCGCCGTGGATGCACAAGAGAGCGATCTCGGCATCCTCGACCTCGTT
CAGGTCTTTGTGGAGGCGCTAGACAAGTGCTTCGAGAACGTGTGCGAGTT
AGACCTCATCTTTCACTCCGACAAGTCTTTGTGGAGGCGCTAGACAAGTG
CTTCGAGAACGTGTGCGAGTTAGACCTCATCTTTCACTCCGACAAGGTTC
ATTACGTCCTCGACGAGATCATCATGGGCGGCATGGTTCTCGAGACCAAC
ATCAACCAAATCCTGACCGCGATCAACGACCAAAACCGCCTCCACGCCGC
CTCGAACAAGGTCGGCCTTCCCCCTTCGGGCGGCATCAGTGTCCACGGCA
GGCCTTCCGGTGGGGTCGGGGGCGGCGTACCCTCGGGGATTCCTGGCATG
CGAACAAGATGAGTTCATTACGTCCTCGACGAGATCATCATGGGCGGCAT
GGTTCTCGAGACCAACATCAACCAAATCCTGACCGCGATCAACGACCAAA
ACCGCCTCCACGCCGCCTCGAACAAGGTCGGCCTTCCCCCTTCGGGCGGC
ATCAGTGTCCACGGCAGGCCTTCCGGTGGGGTCGGGGGCGGCGTACCCTC
GGGGATTCCTGGCATGCGAACAAGATGA
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