mRNA_L-elsbetiae_contig6637.15363.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6637.15363.1 vs. uniprot
Match: A0A6H5KGB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGB1_9PHAE) HSP 1 Score: 395 bits (1016), Expect = 3.800e-130 Identity = 258/431 (59.86%), Postives = 307/431 (71.23%), Query Frame = 1 Query: 1 QAQLDRFMEYPKAAERMAEELERQECQKSARREKNLMILERKEFRRQLHMFQKWQTENKVLRERDKLREIQALTLRRQLAVTEAGLAGSASTRKAVMGGTVDRLQRAETTARHQQASKYRELAGARGVQVAQLETEVSSLKATIKNLRSKLEPLAHDSYETEIARLARASPEVLEIQQKSGLNREDMEASLVQLKLLREKEEQKDSLIALARERDEFELSVKELRARNSWLEKKVLGTPGPSRPVAQQEEWVSAVARARETDLSRWAGTGA-------VDGGWTGVQGSSSRCR-GDPVSRLEHRLEMQRGRGGAEAGEEGRLVGAPTARIRRNIQFLQDCDRSIERQREREAASSCTQSARREG--------GAPVGVGGISAVRKQRPQSAQGLSRRPSSSSRTYEGG-----------LFRRGGRPVS 1212 QAQLDRFMEYPKAAERMAEELER C+K+ARREKNLM+LERKEFRRQLHMFQKWQTEN LRE+ + +E+Q + LRRQLAVTE+GLAGSASTRKAV+GGTVDRLQRAET A+HQ A KYRELAGARGVQ AQL+ E+SSLKATIK LR KLEP AHDSYETEIARLAR +PEVL+IQQKSGL++EDMEAS+VQLKLLREKEEQKD+LIALARERDEF L +K+LRARNSWLEK++L TP R VA EE V+A A + D S+ + T + +GG G++ +S R + RL ++ + G G A G TAR+RR I+ L++CD SIE+QRERE ++ S G V + ++RPQSAQGL R P+SS + G LF RGGR +S Sbjct: 53 QAQLDRFMEYPKAAERMAEELER--CKKTARREKNLMVLERKEFRRQLHMFQKWQTENSNLREKARAQEMQVVALRRQLAVTESGLAGSASTRKAVIGGTVDRLQRAETAAKHQ-AHKYRELAGARGVQAAQLKAEISSLKATIKTLRLKLEPPAHDSYETEIARLARVNPEVLDIQQKSGLSKEDMEASMVQLKLLREKEEQKDALIALARERDEFALCIKDLRARNSWLEKQMLKTPDALRSVA--EERVAAAAPTKRPDNSKRSETSSNHGWISSQNGGSRGIKNHASPDRENEAAPRLANQSWARHGSGEARVGS--------TARVRRTIKMLENCDWSIEKQRERETNANNNVSVLHXXXXXXXASRGPVAAVLAVRQTSRKRPQSAQGLCRPPASSPGGSDIGSGETGVLPLRCLFPRGGRGLS 470
BLAST of mRNA_L-elsbetiae_contig6637.15363.1 vs. uniprot
Match: D8LEA2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEA2_ECTSI) HSP 1 Score: 370 bits (949), Expect = 7.390e-121 Identity = 228/344 (66.28%), Postives = 260/344 (75.58%), Query Frame = 1 Query: 1 QAQLDRFMEYPKAAERMAEELERQECQKSARREKNLMILERKEFRRQLHMFQKWQTENKVLRERDKLREIQALTLRRQLAVTEAGLAGSASTRKAVMGGTVDRLQRAETTARHQQASKYRELAGARGVQVAQLETEVSSLKATIKNLRSKLEPLAHDSYETEIARLARASPEVLEIQQKSGLNREDMEASLVQLKLLREKEEQKDSLIALARERDEFELSVKELRARNSWLEKKVLGTPGPSRPVAQQEEWVSAVARARETDLSRWAGTGAVDGGWTGVQGSSSRCRGDPVSRLE----------HRLEMQRGRGGAEAGEEGRLVGAPTARIRRNIQFLQDCD 1002 QAQLDRFMEYPKAAERMAEELER C+K+ARREKNLM+LERKEFRRQLHMFQKWQTEN LRE+ + +E+Q + LRRQLAVTE+GLAGSASTRKAV+GGTVDRLQRAET A+HQ KYRELAGARGVQ AQ++TE+SSLKATIK LR KLEP AHDSYETEIARLAR +PEVL+IQQKSGL++EDMEAS+ QLKLLREKEEQKD+LIALARERDEF L +K+LRARNSWLEK+VL TP R VA EE V+ A + D S+ A T + + GW Q R H Q G EAG VG+ TAR+RR I+ L+DCD Sbjct: 88 QAQLDRFMEYPKAAERMAEELER--CKKTARREKNLMVLERKEFRRQLHMFQKWQTENSNLREKARAQEMQVVALRRQLAVTESGLAGSASTRKAVIGGTVDRLQRAETAAKHQ-VHKYRELAGARGVQAAQMKTEISSLKATIKTLRLKLEPPAHDSYETEIARLARVNPEVLDIQQKSGLSKEDMEASMAQLKLLREKEEQKDALIALARERDEFALCIKDLRARNSWLEKQVLKTPDALRSVA--EERVAGAAPTKRPDNSKRAETSS-NHGWMTTQNGGGRXXXXXXXXXXXXXXXXXXXXHSWAQQ---GSGEAG-----VGS-TARVRRTIKMLEDCD 416 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6637.15363.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6637.15363.1 >prot_L-elsbetiae_contig6637.15363.1 ID=prot_L-elsbetiae_contig6637.15363.1|Name=mRNA_L-elsbetiae_contig6637.15363.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=402bp MEYPKAAERMAEELERQECQKSARREKNLMILERKEFRRQLHMFQKWQTEback to top mRNA from alignment at L-elsbetiae_contig6637:192..5210+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6637.15363.1 ID=mRNA_L-elsbetiae_contig6637.15363.1|Name=mRNA_L-elsbetiae_contig6637.15363.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5019bp|location=Sequence derived from alignment at L-elsbetiae_contig6637:192..5210+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6637:192..5210+ >mRNA_L-elsbetiae_contig6637.15363.1 ID=mRNA_L-elsbetiae_contig6637.15363.1|Name=mRNA_L-elsbetiae_contig6637.15363.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2412bp|location=Sequence derived from alignment at L-elsbetiae_contig6637:192..5210+ (Laminarionema elsbetiae ELsaHSoW15)back to top |