mRNA_L-elsbetiae_contig6636.15362.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6636.15362.1 vs. uniprot
Match: D7G937_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G937_ECTSI) HSP 1 Score: 218 bits (554), Expect = 6.370e-66 Identity = 123/141 (87.23%), Postives = 130/141 (92.20%), Query Frame = 2 Query: 206 RMRRMKQQQEFKKAREALLEKVAARSFAKNYLSNLKSNVFDDLEDEGHFFDPLSKEVREVFLPWLMDDVVQKVDKAVESMAVVDGLLSEAAEHASRIHREAVEAKEAERARIKAEALAIVEEARRKAEEEEAAARAXQEXL 628 +MRRMKQQQE KKAREALLEKVAARSFAKNYLSNLK++VFDDLEDEGHF+DPLSKEV+EVFLPWLM D+V+KVDKAVESMAVVDGLLS A EHASRIHREAVEAKEAERARI AEALA EEARRK EEEEAA RA QE L Sbjct: 227 KMRRMKQQQEVKKAREALLEKVAARSFAKNYLSNLKTDVFDDLEDEGHFYDPLSKEVKEVFLPWLMGDMVRKVDKAVESMAVVDGLLSGATEHASRIHREAVEAKEAERARIVAEALAEAEEARRKVEEEEAAIRAAQEAL 367
BLAST of mRNA_L-elsbetiae_contig6636.15362.1 vs. uniprot
Match: A0A6H5JGL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGL2_9PHAE) HSP 1 Score: 209 bits (531), Expect = 1.920e-65 Identity = 118/140 (84.29%), Postives = 126/140 (90.00%), Query Frame = 2 Query: 209 MRRMKQQQEFKKAREALLEKVAARSFAKNYLSNLKSNVFDDLEDEGHFFDPLSKEVREVFLPWLMDDVVQKVDKAVESMAVVDGLLSEAAEHASRIHREAVEAKEAERARIKAEALAIVEEARRKAEEEEAAARAXQEXL 628 MRRMKQQQE KKAREALLEKVAARSF KNYLS+LK++VFDDLEDEGHF+DPLSKEV+EVFLPWLM D+V+KVDKAVESMAVVDGLLS A HASRIHREAVEAK+AER RI AEALA EEARRK EEEEAA RA QE L Sbjct: 1 MRRMKQQQEVKKAREALLEKVAARSFTKNYLSSLKTDVFDDLEDEGHFYDPLSKEVKEVFLPWLMGDMVRKVDKAVESMAVVDGLLSGATAHASRIHREAVEAKQAERTRIVAEALAEAEEARRKVEEEEAAIRAAQEAL 140
BLAST of mRNA_L-elsbetiae_contig6636.15362.1 vs. uniprot
Match: A0A7S2GZH4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GZH4_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 6.270e-20 Identity = 46/99 (46.46%), Postives = 72/99 (72.73%), Query Frame = 2 Query: 212 RRMKQQQEFKKAREALLEKVAARSFAKNYLSNLKSNVFDDLEDEGHFFDPLSKEVREVFLPWLMDDVVQKVDKAVESMAVVDGLLSEAAEHASRIHREA 508 RR+KQ++E K+ ++ L EK+AARSFAKNY S+L S+VF LE+ GHF+DP+++EV ++FLPWL+D+VV D + + D L+ EA + + + ++A Sbjct: 238 RRLKQEKERKRLQKELKEKIAARSFAKNYTSDLTSSVFATLEEAGHFYDPVNREVEQLFLPWLLDEVVSNADAVQAAQSATDSLIKEALKKTTELQKKA 336
BLAST of mRNA_L-elsbetiae_contig6636.15362.1 vs. uniprot
Match: A0A7S2C2M4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C2M4_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 2.730e-17 Identity = 51/100 (51.00%), Postives = 68/100 (68.00%), Query Frame = 2 Query: 251 EALLEKVAARSFAKNYLSNLKSNVFDDLEDEGHFFDPLSKEVREVFLPWLMDDVVQKVDKAVESMAVVDGLLSEAAEHASRIHREAVEAKEAERARIKAE 550 + L EKVAARSFAK+YL++L S+VF LE+ GHF+DP+ KEV + FLPWLMD VV +VD + A+ D LL+ A + A + EAE+AR+ AE Sbjct: 241 QELKEKVAARSFAKSYLTDLHSDVFMALEETGHFYDPVRKEVSDDFLPWLMDSVVTEVDSVQTAHALADDLLTVALQKAIELQAAETAIFEAEQARVAAE 340
BLAST of mRNA_L-elsbetiae_contig6636.15362.1 vs. uniprot
Match: A0A7S3ZX10_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZX10_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 2.580e-16 Identity = 43/94 (45.74%), Postives = 65/94 (69.15%), Query Frame = 2 Query: 263 EKVAARSFAKNYLSNLKSNVFDDLEDEGHFFDPLSKEVREVFLPWLMDDVVQKVDKAVESMAVVDGLLSEAAEHASRIHREAV-EAKEAERARI 541 +KVAAR+FA++YL+NL FD LED GHF DP+ KE+++ F+PWL D VV+ + + S + VD L+ +A E AS + + + + K+ ERAR+ Sbjct: 269 QKVAARAFARSYLANLSELAFDQLEDSGHFVDPVEKEIQDSFIPWLFDSVVETTNNHISSSSCVDALIVDAIELASNLQSDVIKQIKQKERARV 362
BLAST of mRNA_L-elsbetiae_contig6636.15362.1 vs. uniprot
Match: A0A836CGH7_9STRA (Radial spoke 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGH7_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 7.540e-16 Identity = 43/84 (51.19%), Postives = 57/84 (67.86%), Query Frame = 2 Query: 206 RMRRMKQQQEFKKAREALLEKVAARSFAKNYLSNLKSNVFDDLEDEGHFFDPLSKEVREVFLPWLMDDVVQKVDKAVESMAVVD 457 + RR+KQ QE ++AREA KVAARSFA+ YLS+L ++VF LE EGHF+DPL +EV E F+PWL D +A A+ + Sbjct: 186 KQRRLKQAQESRRAREAAAAKVAARSFARTYLSSLNADVFGGLEAEGHFYDPLRREVAEAFMPWLADAGAADAQRAAALRALAE 269
BLAST of mRNA_L-elsbetiae_contig6636.15362.1 vs. uniprot
Match: A0A7S4M9E3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4M9E3_9EUKA) HSP 1 Score: 77.0 bits (188), Expect = 3.650e-14 Identity = 51/113 (45.13%), Postives = 68/113 (60.18%), Query Frame = 2 Query: 263 EKVAARSFAKNYLSNLKSNVFDDLEDEGHFFDPLSKEVREVFLPWLMDDVVQKVDKAVESMAVVDGLLSEAAEHASRIHREAVEAKEAERARIKAEALAIVEEARRKAEEEEA 601 EKVAAR+F K +LS L+S V +L D G F+DPL EV FLPWLMD + +K+D + A+ D L+++AA+ R+ +AKE E R +VEEAR AE E A Sbjct: 30 EKVAARTFTKGFLSQLQSQVVQNLADAGFFYDPLETEVTTNFLPWLMDSMTEKLDTLAVARALADDLIADAAK------RQTEKAKEFENCRQ------LVEEARLAAEAEAA 130
BLAST of mRNA_L-elsbetiae_contig6636.15362.1 vs. uniprot
Match: F0YLW3_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLW3_AURAN) HSP 1 Score: 79.0 bits (193), Expect = 1.130e-13 Identity = 40/72 (55.56%), Postives = 50/72 (69.44%), Query Frame = 2 Query: 266 KVAARSFAKNYLSNLKSNVFDDLEDEGHFFDPLSKEVREVFLPWLMDDVVQKVDKAVESMAVVDGLLSEAAE 481 KVAARSFA+NYL +L VFD LE GHF+DP+ KEV +VFLPWL+D VV D + A D L+++A E Sbjct: 240 KVAARSFARNYLVDLSDAVFDALETTGHFYDPVLKEVEDVFLPWLLDGVVADADNHGAARACSDALVADAME 311
BLAST of mRNA_L-elsbetiae_contig6636.15362.1 vs. uniprot
Match: A0A0R3W5L7_TAEAS (Uncharacterized protein n=2 Tax=Taenia asiatica TaxID=60517 RepID=A0A0R3W5L7_TAEAS) HSP 1 Score: 77.8 bits (190), Expect = 2.190e-13 Identity = 35/89 (39.33%), Postives = 64/89 (71.91%), Query Frame = 2 Query: 212 RRMKQQQEFKKAREALLEKVAARSFAKNYLSNLKSNVFDDLEDEGHFFDPLSKEVREVFLPWLMDDVVQKVDKAVESMAVVDGLLSEAA 478 RR+ Q E++ R+ ++EK+AAR+FA+ Y+ L NV++DL ++G+F+D + ++V E F+PWL+D V +++D + A++D ++ EAA Sbjct: 136 RRIAQHLEYQAKRKEVMEKIAARTFARVYIEPLVPNVYEDLYNQGYFYDVVQRDVAETFIPWLLDAVCEELDLEAKIRALLDSMICEAA 224
BLAST of mRNA_L-elsbetiae_contig6636.15362.1 vs. uniprot
Match: UPI0014039C17 (radial spoke head protein 3 homolog n=1 Tax=Amblyraja radiata TaxID=386614 RepID=UPI0014039C17) HSP 1 Score: 77.8 bits (190), Expect = 3.830e-13 Identity = 39/97 (40.21%), Postives = 63/97 (64.95%), Query Frame = 2 Query: 215 RMKQQQEFKKAREALLEKVAARSFAKNYLSNLKSNVFDDLEDEGHFFDPLSKEVREVFLPWLMDDVVQKVDKAVESMAVVDGLLSEAAEHASRIHRE 505 RM QQQE + +K+AAR+FA+NYL++L VF L D G+F+DP+ ++V VFLPWLM +V + ++K + ++D LL + + S++ R+ Sbjct: 240 RMIQQQEVLNKEKETADKIAARAFAQNYLADLIPIVFSTLRDNGYFYDPVERDVENVFLPWLMGEVKKSIEKKILGRTMLDILLRDVENNRSQMFRD 336 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6636.15362.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6636.15362.1 >prot_L-elsbetiae_contig6636.15362.1 ID=prot_L-elsbetiae_contig6636.15362.1|Name=mRNA_L-elsbetiae_contig6636.15362.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=185bp MLCLHYGFRVARSFPGFGRMRRMKQQQEFKKAREALLEKVAARSFAKNYLback to top mRNA from alignment at L-elsbetiae_contig6636:5965..9317+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6636.15362.1 ID=mRNA_L-elsbetiae_contig6636.15362.1|Name=mRNA_L-elsbetiae_contig6636.15362.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3353bp|location=Sequence derived from alignment at L-elsbetiae_contig6636:5965..9317+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6636:5965..9317+ >mRNA_L-elsbetiae_contig6636.15362.1 ID=mRNA_L-elsbetiae_contig6636.15362.1|Name=mRNA_L-elsbetiae_contig6636.15362.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1110bp|location=Sequence derived from alignment at L-elsbetiae_contig6636:5965..9317+ (Laminarionema elsbetiae ELsaHSoW15)back to top |