mRNA_L-elsbetiae_contig6635.15361.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6635.15361.1
Unique NamemRNA_L-elsbetiae_contig6635.15361.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6635.15361.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 1.470e-25
Identity = 82/209 (39.23%), Postives = 111/209 (53.11%), Query Frame = 1
Query:   13 YYAHERAVEKGHDGVVRVMMELGVDVTTEFNGYTALHFARAN---IMIDMLIKAGADIEARDLQGKTPL----NNGAHDGVGIKTICAFVDHGANVNTQDDGGDTPLHAAAYCNPE-----LVEILLRAGADETMVNGNGLAAAGVVA---EFG----NNSDKDRVILNMLASAPADRAWRRRGLLLLC-----VDRHTREALPSTDGV 567
            Y   + A +KG   V+R +++ GVDV    +GYT+LH A  N     ID+L++AGA +E  D    TP     +N  H+        A   HGAN+  +D  G+TPL  AA          +V++LLR GADET +N +G  AA VV    E+     N  D +RV  ++L +APADRAWRRRGLL+LC       R  R A  S  G+
Sbjct:  157 YSVLDFAAQKGDACVLRAILQHGVDVNRRTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACSNHCHE-----AALALFKHGANIEARDMRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERV-RDLLENAPADRAWRRRGLLVLCRAFWIKSRRLRAASSSARGI 359          
BLAST of mRNA_L-elsbetiae_contig6635.15361.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 3.810e-24
Identity = 83/217 (38.25%), Postives = 118/217 (54.38%), Query Frame = 1
Query:   40 KGHDGVVRVMMELGVDV-TTEFNGYTALHFARANIMI---DMLIKAGADIEARDLQGKTPLNNGA--HDGVGIKTICAFVDHGANVNTQDDGGDTPLH-----AAAYCNPELVEILLRAGADETMVNGNGLAAAGVVAEFGNNSDKDRV------ILNMLASAPADRAWRRRGLLLLCVDRHTREALPSTDGVA---AWVLALGGQQGAFRTIVGYL 630
            +GH   +R ++E G DV  T + G  ALH A AN  +   D+L++AGA+  +    G T L+  A         T+   + HGA+VN Q  GG + L      A      E+V++LLR GADET V GNG+ AA  +       ++DR+      +  +LA+APADRAWRRR  L+LC  R  +  L S+D +A   A VL L  ++G FRTIV ++
Sbjct:  170 EGHVDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGM--KVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQL-SSDRIARLEARVLGLV-EEGIFRTIVRFI 382          
BLAST of mRNA_L-elsbetiae_contig6635.15361.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 5.160e-23
Identity = 74/189 (39.15%), Postives = 102/189 (53.97%), Query Frame = 1
Query:   13 YYAHERAVEKGHDGVVRVMMELGVDVTTEFNGYTALHFARAN---IMIDMLIKAGADIEARDLQGKTPLN----NGAHDGVGIKTICAFVDHGANVNTQDDGGDTPLHAAAYCNPE-----LVEILLRAGADETMVNGNGLAAAGVVA---EFG----NNSDKDRVILNMLASAPADRAWRRRGLLLLC 522
            Y   + A +KG   V+R +++ GVDV    +GYT+LH A  N     ID+L++AGA +E  D    TP      N  H+        A   HG+N+  +D  G+TPL  AA          +V++LLR GADET +N +G  AA VV    E+     N  D +RV  ++L +AP DRAWRRRG L+LC
Sbjct:  108 YSVLDLAAQKGDACVLRAILQHGVDVNRRTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACINHCHE-----AALALYKHGSNIEARDIRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERV-RDLLENAPVDRAWRRRGFLVLC 290          
BLAST of mRNA_L-elsbetiae_contig6635.15361.1 vs. uniprot
Match: Q8QNC5_ESV1K (EsV-1-157 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNC5_ESV1K)

HSP 1 Score: 100 bits (250), Expect = 5.360e-22
Identity = 67/201 (33.33%), Postives = 103/201 (51.24%), Query Frame = 1
Query:   43 GHDGVVRVMMELGVDVT-TEFNGYTALHFARANIMIDMLIKAGADIEARDLQGKTPLNNGA-HDGVGIKTICAFVDHGANVNTQDDGGDTPLHAAAYCN--PELVEILLRAGADETMVNGNGLAAAGVVAEFGNNSDKDRVILNMLASAPADRAWRRRGLLLLCVDRHTREALPSTDGVAAWVL-ALGGQQGAFRTIVGYL 630
            G    VR ++ LG D   ++  GYTAL FA+   ++DML+KAGAD++AR   G TPL +   H  +                         +  + +C+    ++++LLR+GADE + +  G      ++E     +      ++L SAP DRAWRRRG +L+CV R+      S  G+A W++ A  GQ G FR++V YL
Sbjct:  114 GCPDAVRALVRLGADANRSDCCGYTALFFAKDREVVDMLLKAGADVDARAEDGITPLMHACFHTDIXXXXXXXXXXXXXXXXXXXXXXVLYVICSEFCDFVVAMLDLLLRSGADERIADSRGRLPVDCLSERIYAKEVVGQARHLLLSAPQDRAWRRRGFVLMCVSRNA--GADSRGGLAQWLMRARAGQAGVFRSVVRYL 312          
BLAST of mRNA_L-elsbetiae_contig6635.15361.1 vs. uniprot
Match: D7FSI6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI6_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 2.590e-19
Identity = 69/191 (36.13%), Postives = 107/191 (56.02%), Query Frame = 1
Query:   31 AVEKGHDGVVRVMMELGVDVTTEF---NGYTALHFARANIM---IDMLIKAGADIEARDLQGK----TPLNNGAHDGVGIKTICAFVDHGANVNTQDDGGDTPLHAAAYCNP----ELVEILLRAGADETMVNGNGLAAAGV---VAEFGNNSDKDRV-ILNMLASAPADRAWRRRGLLLLCVDRHTREAL 549
            A + GH GV++  +E GVD +++    +G+TALH A  +     +++L++AGAD +   L G     TPL   A + +  + +   + +GA+ N  DD G  PLH AA+       E+V++LLR GA ET VN +G   A V   +A    ++ ++R   L +LA APADRAWRRRG +++   R   E +
Sbjct:  174 ATQLGHVGVIKAFLEHGVDASSQACPASGWTALHQAALDNQAEAVEVLLEAGADADVESLPGSPCYDTPLLAAA-ESMSNEALRVLLRNGADPNKPDDNGSMPLHLAAHEQTPGVMEVVDLLLRWGASETAVNKHGNTPAEVFQRLAIHRPDATEERAGALVLLARAPADRAWRRRGWVVMLRARSETERI 363          
BLAST of mRNA_L-elsbetiae_contig6635.15361.1 vs. uniprot
Match: D8LCR2_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCR2_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 1.730e-18
Identity = 78/232 (33.62%), Postives = 119/232 (51.29%), Query Frame = 1
Query:   10 LYYAHERAVEKGHDGVVRVMMELGVDVTTEFN-GYTALHFA----RANIMIDMLIKAGADIEARD-------------LQGKTPLNNGAHDGVGIKTICAFVDHGANVNTQDDGGDTPLHAAAYCNPELV------EILLRAGADETMVNGNGLAAAGVVAEFGNNSDKDRVILNMLASAPADRAWRRRG-LLLLCVDRHTREALPSTDGVAAWVLALGGQQGAFRTIVGYL 630
            LY A   A       +   ++ +G DVT+  N GY+ALH+A    R+++ +D LI+ GAD+EAR              ++G TPL+  A+ G     +       AN N QD+ G +PLH     NP++       +ILLR+GADET  + +    A ++A   ++   +  +  +LA+APADRAWRRRG L++L       E   +TD V   ++ L  +   FR IV +L
Sbjct:  167 LYLARRNAA------MTSALVGMGADVTSVDNIGYSALHWAVRDGRSDV-VDALIEVGADVEARTSRMISYYSDGGHCMKGMTPLHEAAYQGNYPGMLVLLQKGRANANAQDEHGHSPLHILCM-NPQVCSAAACSDILLRSGADETATDEDRHTPADIMA---SSEGHNGWLQQLLANAPADRAWRRRGTLVMLRAQGVQAENEATTDAVLPRLVDLQNE-ALFRHIVRFL 386          
BLAST of mRNA_L-elsbetiae_contig6635.15361.1 vs. uniprot
Match: D8LPH8_ECTSI (EsV-1-157 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPH8_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 2.620e-18
Identity = 65/202 (32.18%), Postives = 101/202 (50.00%), Query Frame = 1
Query:   43 GHDGVVRVMMELGVDVT-TEFNGYTALHFARANIMIDMLIKAGADIEARDLQGKTPLNNGA-HDGVGIKTICAFVDHGANVNTQDDGGDTPLHAAAYCN--PELVEILLRAGADETMVNGN-GLAAAGVVAEFGNNSDKDRVILNMLASAPADRAWRRRGLLLLCVDRHTREALPSTDGVAAWVL-ALGGQQGAFRTIVGYL 630
            G    VR ++ LG D T ++  GYTAL FA+   ++DML+ AGAD++AR   G TPL +   H                            +  +  C+    ++++LLR+GADE + + + G      ++E     +      ++L SAP DRAWRRRG +L+C+ R        +D +A W++ A  GQ+G FR +V YL
Sbjct:  106 GCPDAVRALVRLGADATRSDCCGYTALFFAKDREVVDMLVDAGADVDARAEDGITPLMHACFHTDXXXXXXXXXXXXXXXXXXXXXXXVLSVICSELCDFVVAMLDLLLRSGADERIADSDHGRLPVDCLSERVYPKEVVGQARHLLLSAPRDRAWRRRGFVLMCMSRSAGAESSGSD-LARWLVSARAGQEGVFREVVRYL 306          
BLAST of mRNA_L-elsbetiae_contig6635.15361.1 vs. uniprot
Match: A0A6H5JU40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU40_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 3.180e-18
Identity = 58/163 (35.58%), Postives = 88/163 (53.99%), Query Frame = 1
Query:   49 DGVVRVMMELGVDVTTEFNGYTALHFA-RANIMIDMLIKAGADIEAR-DLQGKT--PLNNGAHDGVGIKTICAFVDHGANVNTQDDGGDTPLHAAAY-CNPELVEILLRAGADETMVNGNGLAAAGVVAEFGNNSDKDRVILNMLASAPADRAWRRRGLLLLC 522
            + + R +++ G DV    +   A++ A R   ++ +L+KAGA ++   D  G    PL+   +  +    +   + HGANVN QD  G + LH  A   +  LV++LLR GADET+ NG+    A        + +  R +L +L  APADRAWRRRG +LLC
Sbjct:  193 EDMTRALLQHGADVNELDDYEIAINEAVRCGNVVKLLLKAGALVDGHNDFHGLVLAPLHAACNFSLSCDVVKVLLGHGANVNLQDSEGTSALHLTAVRFSSRLVDLLLRHGADETINNGDSSTPADCARLKAGHQEASRPVLRLLGGAPADRAWRRRGRVLLC 355          
BLAST of mRNA_L-elsbetiae_contig6635.15361.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 6.020e-18
Identity = 71/222 (31.98%), Postives = 108/222 (48.65%), Query Frame = 1
Query:   25 ERAVEKGHDGVVRVMMELG---VDVTTEFNGYTALHFARA--------NIMIDMLIKAGADIEARDLQGK--TPLNNGAHDGV-GIKTICAFVDHGANVNTQDDGGDTPLH-AAAYCNPELVEILLRAGADETMVNGNGLAAAGVVAEFGNNS--DKDRVILN-----MLASAPADRAWRRRGLLLLCVDRHTREALPSTDGVAAWVLALGGQQGAFRTIVG 624
            E A  +GH  V++ +++     VD   +  G+ ALH+  +           + +L+ AGAD+  +       TPL+   +  +    TICA ++ GAN+N +  G DTPLH A       +VE+LLR GADE + N +G   A VV     N   D++R   N     MLA APADR+WRRRG L+L     TR  + +    ++ +  + G       + G
Sbjct:  250 EIAAGRGHADVLKALLDKRSSEVDTANDL-GWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTNDSCATPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDDEEREADNQRIHRMLARAPADRSWRRRGWLVLSRSCPTRVHIANGSSSSSSISRINGNSAKVARVSG 470          
BLAST of mRNA_L-elsbetiae_contig6635.15361.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 7.340e-18
Identity = 72/161 (44.72%), Postives = 93/161 (57.76%), Query Frame = 1
Query:   79 GVDVTTEFN-GYTALHFARA---NIMIDMLIKAGADIEARDLQGKTPLNNGAHDGVGIKTICAFVDHGANVNTQDDGGDTPLH--AAAYCNP---ELVEILLRAGADETMVNGNGLAAAGVVAEFGNNSDK-----DRVILNMLASAPADRAWRRRGLLLL 519
            G DV  + N G TAL  A A      ID+L +AGA+IEA+   G TPL+  + +G  +    A + HGA+V  ++    TPLH  AA   +P   E+V++LLR GADET V+ NG  AA +V      SD      DRV   +LA APADRAWRRRG L+L
Sbjct:  547 GGDVNAKVNNGITALRVASAFDKAPAIDVLTEAGANIEAQ-ANGSTPLHVASQEGR-LAAGIALLRHGASVGKKNAAAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRV-RKLLARAPADRAWRRRGFLIL 704          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6635.15361.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNU3_9PHAE1.470e-2539.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKL4_ECTSI3.810e-2438.25Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
D7G6X8_ECTSI5.160e-2339.15Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
Q8QNC5_ESV1K5.360e-2233.33EsV-1-157 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
D7FSI6_ECTSI2.590e-1936.13Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
D8LCR2_ECTSI1.730e-1833.62Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D8LPH8_ECTSI2.620e-1832.18EsV-1-157 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JU40_9PHAE3.180e-1835.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQN0_ECTSI6.020e-1831.98Ankyrin repeat protein n=2 Tax=Ectocarpus siliculo... [more]
A0A6H5JHY9_9PHAE7.340e-1844.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6635contigL-elsbetiae_contig6635:306..938 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score110.2
Seed ortholog evalue1.2e-21
Seed eggNOG ortholog2880.D7FKL4
KEGG koko:K21440
Hectar predicted targeting categoryother localisation
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Ec32 ortholog descriptionEsV-1-157 ankyrin-repeat protein
Ec32 orthologEc-06_005330.1
Exons1
Model size633
Cds size633
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816734.764732-CDS-L-elsbetiae_contig6635:305..9381622816734.764732-CDS-L-elsbetiae_contig6635:305..938Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6635 306..938 +
1691683774.342311-CDS-L-elsbetiae_contig6635:305..9381691683774.342311-CDS-L-elsbetiae_contig6635:305..938Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6635 306..938 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6635.15361.1prot_L-elsbetiae_contig6635.15361.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6635 306..938 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6635.15361.1

>prot_L-elsbetiae_contig6635.15361.1 ID=prot_L-elsbetiae_contig6635.15361.1|Name=mRNA_L-elsbetiae_contig6635.15361.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=211bp
MEVLYYAHERAVEKGHDGVVRVMMELGVDVTTEFNGYTALHFARANIMID
MLIKAGADIEARDLQGKTPLNNGAHDGVGIKTICAFVDHGANVNTQDDGG
DTPLHAAAYCNPELVEILLRAGADETMVNGNGLAAAGVVAEFGNNSDKDR
VILNMLASAPADRAWRRRGLLLLCVDRHTREALPSTDGVAAWVLALGGQQ
GAFRTIVGYL*
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mRNA from alignment at L-elsbetiae_contig6635:306..938+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6635.15361.1 ID=mRNA_L-elsbetiae_contig6635.15361.1|Name=mRNA_L-elsbetiae_contig6635.15361.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=633bp|location=Sequence derived from alignment at L-elsbetiae_contig6635:306..938+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGAGGTACTCTATTATGCACACGAGAGAGCCGTTGAAAAAGGGCACGA TGGTGTTGTGAGGGTTATGATGGAGCTGGGAGTGGATGTGACCACAGAGT TCAATGGCTACACTGCTCTTCATTTTGCAAGGGCAAATATCATGATCGAC ATGCTCATCAAGGCCGGGGCAGACATCGAGGCACGGGACCTCCAGGGGAA GACACCTCTCAACAACGGAGCACACGATGGAGTAGGCATCAAAACTATAT GCGCCTTCGTGGACCACGGTGCCAATGTCAACACCCAGGATGACGGAGGC GATACACCGTTGCACGCAGCCGCATATTGCAATCCCGAGTTGGTGGAGAT CCTGTTGAGAGCCGGCGCGGACGAGACGATGGTCAACGGCAACGGCCTTG CAGCGGCGGGCGTGGTTGCCGAGTTCGGCAATAACAGTGACAAGGATCGC GTCATACTCAATATGTTAGCGAGCGCTCCGGCCGACAGAGCATGGCGTCG CCGGGGCCTGTTGCTTCTGTGCGTTGATCGGCACACGAGGGAGGCTCTGC CGAGTACAGACGGTGTGGCCGCCTGGGTTTTGGCGCTAGGGGGCCAACAA GGTGCCTTCCGAACGATTGTGGGCTATCTCTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6635:306..938+

>mRNA_L-elsbetiae_contig6635.15361.1 ID=mRNA_L-elsbetiae_contig6635.15361.1|Name=mRNA_L-elsbetiae_contig6635.15361.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1266bp|location=Sequence derived from alignment at L-elsbetiae_contig6635:306..938+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGAGGTACTCTATTATGCACACGAGAGAGCCGTTGAAAAAGGGCACGA
TGGTGTTGTGAGGGTTATGATGGAGCTGGGAGTGGATGTGACCACAGAGT
TCAATGGCTACACTGCTCTTCATTTTGCAAGGGCAAATATCATGATCGAC
ATGCTCATCAAGGCCGGGGCAGACATCGAGGCACGGGACCTCCAGGGGAA
GACACCTCTCAACAACGGAGCACACGATGGAGTAGGCATCAAAACTATAT
GCGCCTTCGTGGACCACGGTGCCAATGTCAACACCCAGGATGACGGAGGC
GATACACCGTTGCACGCAGCCGCATATTGCAATCCCGAGTTGGTGGAGAT
CCTGTTGAGAGCCGGCGCGGACGAGACGATGGTCAACGGCAACGGCCTTG
CAGCGGCGGGCGTGGTTGCCGAGTTCGGCAATAACAGTGACAAGGATCGC
GTCATACTCAATATGTTAGCGAGCGCTCCGGCCGACAGAGCATGGCGTCG
CCGGGGCCTGTTGCTTCTGTGCGTTGATCGGCACACGAGGGAGGCTCTGC
CGAGTACAGACGGTGTGGCCGCCTGGGTTTTGGCGCTAGGGGGCCAACAA
GGTGCCTTCCGAACGATTGTGGGCTATCTCTGAATGGAGGTACTCTATTA
TGCACACGAGAGAGCCGTTGAAAAAGGGCACGATGGTGTTGTGAGGGTTA
TGATGGAGCTGGGAGTGGATGTGACCACAGAGTTCAATGGCTACACTGCT
CTTCATTTTGCAAGGGCAAATATCATGATCGACATGCTCATCAAGGCCGG
GGCAGACATCGAGGCACGGGACCTCCAGGGGAAGACACCTCTCAACAACG
GAGCACACGATGGAGTAGGCATCAAAACTATATGCGCCTTCGTGGACCAC
GGTGCCAATGTCAACACCCAGGATGACGGAGGCGATACACCGTTGCACGC
AGCCGCATATTGCAATCCCGAGTTGGTGGAGATCCTGTTGAGAGCCGGCG
CGGACGAGACGATGGTCAACGGCAACGGCCTTGCAGCGGCGGGCGTGGTT
GCCGAGTTCGGCAATAACAGTGACAAGGATCGCGTCATACTCAATATGTT
AGCGAGCGCTCCGGCCGACAGAGCATGGCGTCGCCGGGGCCTGTTGCTTC
TGTGCGTTGATCGGCACACGAGGGAGGCTCTGCCGAGTACAGACGGTGTG
GCCGCCTGGGTTTTGGCGCTAGGGGGCCAACAAGGTGCCTTCCGAACGAT
TGTGGGCTATCTCTGA
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