mRNA_L-elsbetiae_contig6635.15361.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6635.15361.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 112 bits (281), Expect = 1.470e-25 Identity = 82/209 (39.23%), Postives = 111/209 (53.11%), Query Frame = 1 Query: 13 YYAHERAVEKGHDGVVRVMMELGVDVTTEFNGYTALHFARAN---IMIDMLIKAGADIEARDLQGKTPL----NNGAHDGVGIKTICAFVDHGANVNTQDDGGDTPLHAAAYCNPE-----LVEILLRAGADETMVNGNGLAAAGVVA---EFG----NNSDKDRVILNMLASAPADRAWRRRGLLLLC-----VDRHTREALPSTDGV 567 Y + A +KG V+R +++ GVDV +GYT+LH A N ID+L++AGA +E D TP +N H+ A HGAN+ +D G+TPL AA +V++LLR GADET +N +G AA VV E+ N D +RV ++L +APADRAWRRRGLL+LC R R A S G+ Sbjct: 157 YSVLDFAAQKGDACVLRAILQHGVDVNRRTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACSNHCHE-----AALALFKHGANIEARDMRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERV-RDLLENAPADRAWRRRGLLVLCRAFWIKSRRLRAASSSARGI 359
BLAST of mRNA_L-elsbetiae_contig6635.15361.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI) HSP 1 Score: 107 bits (268), Expect = 3.810e-24 Identity = 83/217 (38.25%), Postives = 118/217 (54.38%), Query Frame = 1 Query: 40 KGHDGVVRVMMELGVDV-TTEFNGYTALHFARANIMI---DMLIKAGADIEARDLQGKTPLNNGA--HDGVGIKTICAFVDHGANVNTQDDGGDTPLH-----AAAYCNPELVEILLRAGADETMVNGNGLAAAGVVAEFGNNSDKDRV------ILNMLASAPADRAWRRRGLLLLCVDRHTREALPSTDGVA---AWVLALGGQQGAFRTIVGYL 630 +GH +R ++E G DV T + G ALH A AN + D+L++AGA+ + G T L+ A T+ + HGA+VN Q GG + L A E+V++LLR GADET V GNG+ AA + ++DR+ + +LA+APADRAWRRR L+LC R + L S+D +A A VL L ++G FRTIV ++ Sbjct: 170 EGHVDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGM--KVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQL-SSDRIARLEARVLGLV-EEGIFRTIVRFI 382
BLAST of mRNA_L-elsbetiae_contig6635.15361.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 105 bits (262), Expect = 5.160e-23 Identity = 74/189 (39.15%), Postives = 102/189 (53.97%), Query Frame = 1 Query: 13 YYAHERAVEKGHDGVVRVMMELGVDVTTEFNGYTALHFARAN---IMIDMLIKAGADIEARDLQGKTPLN----NGAHDGVGIKTICAFVDHGANVNTQDDGGDTPLHAAAYCNPE-----LVEILLRAGADETMVNGNGLAAAGVVA---EFG----NNSDKDRVILNMLASAPADRAWRRRGLLLLC 522 Y + A +KG V+R +++ GVDV +GYT+LH A N ID+L++AGA +E D TP N H+ A HG+N+ +D G+TPL AA +V++LLR GADET +N +G AA VV E+ N D +RV ++L +AP DRAWRRRG L+LC Sbjct: 108 YSVLDLAAQKGDACVLRAILQHGVDVNRRTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACINHCHE-----AALALYKHGSNIEARDIRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERV-RDLLENAPVDRAWRRRGFLVLC 290
BLAST of mRNA_L-elsbetiae_contig6635.15361.1 vs. uniprot
Match: Q8QNC5_ESV1K (EsV-1-157 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNC5_ESV1K) HSP 1 Score: 100 bits (250), Expect = 5.360e-22 Identity = 67/201 (33.33%), Postives = 103/201 (51.24%), Query Frame = 1 Query: 43 GHDGVVRVMMELGVDVT-TEFNGYTALHFARANIMIDMLIKAGADIEARDLQGKTPLNNGA-HDGVGIKTICAFVDHGANVNTQDDGGDTPLHAAAYCN--PELVEILLRAGADETMVNGNGLAAAGVVAEFGNNSDKDRVILNMLASAPADRAWRRRGLLLLCVDRHTREALPSTDGVAAWVL-ALGGQQGAFRTIVGYL 630 G VR ++ LG D ++ GYTAL FA+ ++DML+KAGAD++AR G TPL + H + + + +C+ ++++LLR+GADE + + G ++E + ++L SAP DRAWRRRG +L+CV R+ S G+A W++ A GQ G FR++V YL Sbjct: 114 GCPDAVRALVRLGADANRSDCCGYTALFFAKDREVVDMLLKAGADVDARAEDGITPLMHACFHTDIXXXXXXXXXXXXXXXXXXXXXXVLYVICSEFCDFVVAMLDLLLRSGADERIADSRGRLPVDCLSERIYAKEVVGQARHLLLSAPQDRAWRRRGFVLMCVSRNA--GADSRGGLAQWLMRARAGQAGVFRSVVRYL 312
BLAST of mRNA_L-elsbetiae_contig6635.15361.1 vs. uniprot
Match: D7FSI6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI6_ECTSI) HSP 1 Score: 94.7 bits (234), Expect = 2.590e-19 Identity = 69/191 (36.13%), Postives = 107/191 (56.02%), Query Frame = 1 Query: 31 AVEKGHDGVVRVMMELGVDVTTEF---NGYTALHFARANIM---IDMLIKAGADIEARDLQGK----TPLNNGAHDGVGIKTICAFVDHGANVNTQDDGGDTPLHAAAYCNP----ELVEILLRAGADETMVNGNGLAAAGV---VAEFGNNSDKDRV-ILNMLASAPADRAWRRRGLLLLCVDRHTREAL 549 A + GH GV++ +E GVD +++ +G+TALH A + +++L++AGAD + L G TPL A + + + + + +GA+ N DD G PLH AA+ E+V++LLR GA ET VN +G A V +A ++ ++R L +LA APADRAWRRRG +++ R E + Sbjct: 174 ATQLGHVGVIKAFLEHGVDASSQACPASGWTALHQAALDNQAEAVEVLLEAGADADVESLPGSPCYDTPLLAAA-ESMSNEALRVLLRNGADPNKPDDNGSMPLHLAAHEQTPGVMEVVDLLLRWGASETAVNKHGNTPAEVFQRLAIHRPDATEERAGALVLLARAPADRAWRRRGWVVMLRARSETERI 363
BLAST of mRNA_L-elsbetiae_contig6635.15361.1 vs. uniprot
Match: D8LCR2_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCR2_ECTSI) HSP 1 Score: 92.4 bits (228), Expect = 1.730e-18 Identity = 78/232 (33.62%), Postives = 119/232 (51.29%), Query Frame = 1 Query: 10 LYYAHERAVEKGHDGVVRVMMELGVDVTTEFN-GYTALHFA----RANIMIDMLIKAGADIEARD-------------LQGKTPLNNGAHDGVGIKTICAFVDHGANVNTQDDGGDTPLHAAAYCNPELV------EILLRAGADETMVNGNGLAAAGVVAEFGNNSDKDRVILNMLASAPADRAWRRRG-LLLLCVDRHTREALPSTDGVAAWVLALGGQQGAFRTIVGYL 630 LY A A + ++ +G DVT+ N GY+ALH+A R+++ +D LI+ GAD+EAR ++G TPL+ A+ G + AN N QD+ G +PLH NP++ +ILLR+GADET + + A ++A ++ + + +LA+APADRAWRRRG L++L E +TD V ++ L + FR IV +L Sbjct: 167 LYLARRNAA------MTSALVGMGADVTSVDNIGYSALHWAVRDGRSDV-VDALIEVGADVEARTSRMISYYSDGGHCMKGMTPLHEAAYQGNYPGMLVLLQKGRANANAQDEHGHSPLHILCM-NPQVCSAAACSDILLRSGADETATDEDRHTPADIMA---SSEGHNGWLQQLLANAPADRAWRRRGTLVMLRAQGVQAENEATTDAVLPRLVDLQNE-ALFRHIVRFL 386
BLAST of mRNA_L-elsbetiae_contig6635.15361.1 vs. uniprot
Match: D8LPH8_ECTSI (EsV-1-157 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPH8_ECTSI) HSP 1 Score: 90.9 bits (224), Expect = 2.620e-18 Identity = 65/202 (32.18%), Postives = 101/202 (50.00%), Query Frame = 1 Query: 43 GHDGVVRVMMELGVDVT-TEFNGYTALHFARANIMIDMLIKAGADIEARDLQGKTPLNNGA-HDGVGIKTICAFVDHGANVNTQDDGGDTPLHAAAYCN--PELVEILLRAGADETMVNGN-GLAAAGVVAEFGNNSDKDRVILNMLASAPADRAWRRRGLLLLCVDRHTREALPSTDGVAAWVL-ALGGQQGAFRTIVGYL 630 G VR ++ LG D T ++ GYTAL FA+ ++DML+ AGAD++AR G TPL + H + + C+ ++++LLR+GADE + + + G ++E + ++L SAP DRAWRRRG +L+C+ R +D +A W++ A GQ+G FR +V YL Sbjct: 106 GCPDAVRALVRLGADATRSDCCGYTALFFAKDREVVDMLVDAGADVDARAEDGITPLMHACFHTDXXXXXXXXXXXXXXXXXXXXXXXVLSVICSELCDFVVAMLDLLLRSGADERIADSDHGRLPVDCLSERVYPKEVVGQARHLLLSAPRDRAWRRRGFVLMCMSRSAGAESSGSD-LARWLVSARAGQEGVFREVVRYL 306
BLAST of mRNA_L-elsbetiae_contig6635.15361.1 vs. uniprot
Match: A0A6H5JU40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU40_9PHAE) HSP 1 Score: 92.0 bits (227), Expect = 3.180e-18 Identity = 58/163 (35.58%), Postives = 88/163 (53.99%), Query Frame = 1 Query: 49 DGVVRVMMELGVDVTTEFNGYTALHFA-RANIMIDMLIKAGADIEAR-DLQGKT--PLNNGAHDGVGIKTICAFVDHGANVNTQDDGGDTPLHAAAY-CNPELVEILLRAGADETMVNGNGLAAAGVVAEFGNNSDKDRVILNMLASAPADRAWRRRGLLLLC 522 + + R +++ G DV + A++ A R ++ +L+KAGA ++ D G PL+ + + + + HGANVN QD G + LH A + LV++LLR GADET+ NG+ A + + R +L +L APADRAWRRRG +LLC Sbjct: 193 EDMTRALLQHGADVNELDDYEIAINEAVRCGNVVKLLLKAGALVDGHNDFHGLVLAPLHAACNFSLSCDVVKVLLGHGANVNLQDSEGTSALHLTAVRFSSRLVDLLLRHGADETINNGDSSTPADCARLKAGHQEASRPVLRLLGGAPADRAWRRRGRVLLC 355
BLAST of mRNA_L-elsbetiae_contig6635.15361.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 91.7 bits (226), Expect = 6.020e-18 Identity = 71/222 (31.98%), Postives = 108/222 (48.65%), Query Frame = 1 Query: 25 ERAVEKGHDGVVRVMMELG---VDVTTEFNGYTALHFARA--------NIMIDMLIKAGADIEARDLQGK--TPLNNGAHDGV-GIKTICAFVDHGANVNTQDDGGDTPLH-AAAYCNPELVEILLRAGADETMVNGNGLAAAGVVAEFGNNS--DKDRVILN-----MLASAPADRAWRRRGLLLLCVDRHTREALPSTDGVAAWVLALGGQQGAFRTIVG 624 E A +GH V++ +++ VD + G+ ALH+ + + +L+ AGAD+ + TPL+ + + TICA ++ GAN+N + G DTPLH A +VE+LLR GADE + N +G A VV N D++R N MLA APADR+WRRRG L+L TR + + ++ + + G + G Sbjct: 250 EIAAGRGHADVLKALLDKRSSEVDTANDL-GWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTNDSCATPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDDEEREADNQRIHRMLARAPADRSWRRRGWLVLSRSCPTRVHIANGSSSSSSISRINGNSAKVARVSG 470
BLAST of mRNA_L-elsbetiae_contig6635.15361.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 91.7 bits (226), Expect = 7.340e-18 Identity = 72/161 (44.72%), Postives = 93/161 (57.76%), Query Frame = 1 Query: 79 GVDVTTEFN-GYTALHFARA---NIMIDMLIKAGADIEARDLQGKTPLNNGAHDGVGIKTICAFVDHGANVNTQDDGGDTPLH--AAAYCNP---ELVEILLRAGADETMVNGNGLAAAGVVAEFGNNSDK-----DRVILNMLASAPADRAWRRRGLLLL 519 G DV + N G TAL A A ID+L +AGA+IEA+ G TPL+ + +G + A + HGA+V ++ TPLH AA +P E+V++LLR GADET V+ NG AA +V SD DRV +LA APADRAWRRRG L+L Sbjct: 547 GGDVNAKVNNGITALRVASAFDKAPAIDVLTEAGANIEAQ-ANGSTPLHVASQEGR-LAAGIALLRHGASVGKKNAAAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRV-RKLLARAPADRAWRRRGFLIL 704 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6635.15361.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6635.15361.1 >prot_L-elsbetiae_contig6635.15361.1 ID=prot_L-elsbetiae_contig6635.15361.1|Name=mRNA_L-elsbetiae_contig6635.15361.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=211bp MEVLYYAHERAVEKGHDGVVRVMMELGVDVTTEFNGYTALHFARANIMIDback to top mRNA from alignment at L-elsbetiae_contig6635:306..938+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6635.15361.1 ID=mRNA_L-elsbetiae_contig6635.15361.1|Name=mRNA_L-elsbetiae_contig6635.15361.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=633bp|location=Sequence derived from alignment at L-elsbetiae_contig6635:306..938+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6635:306..938+ >mRNA_L-elsbetiae_contig6635.15361.1 ID=mRNA_L-elsbetiae_contig6635.15361.1|Name=mRNA_L-elsbetiae_contig6635.15361.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1266bp|location=Sequence derived from alignment at L-elsbetiae_contig6635:306..938+ (Laminarionema elsbetiae ELsaHSoW15)back to top |