mRNA_L-elsbetiae_contig6594.15301.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6594.15301.1 vs. uniprot
Match: D8LSW6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW6_ECTSI) HSP 1 Score: 121 bits (303), Expect = 9.200e-30 Identity = 73/107 (68.22%), Postives = 80/107 (74.77%), Query Frame = 1 Query: 1 APVEDDGDTQ--TGGLTLDAIDLRIEPGQLVGVVGPVGSSKSSLLMAVLREIAPENLVGMAAATAAAVDDAGAASADESSGEREAERNVSVQGSLAYASQEPWIQSG 315 A VE+D + + GGLTLDAIDLRIEPGQLVGVVGPVGSSKSSLLMAVLREIAPE+ G+ A+AA A GER +E VSV GSLAYASQEPWIQSG Sbjct: 563 AQVEEDNEAEDNAGGLTLDAIDLRIEPGQLVGVVGPVGSSKSSLLMAVLREIAPESAAGVGGASAAE------GGASHGHGERTSELGVSVLGSLAYASQEPWIQSG 663
BLAST of mRNA_L-elsbetiae_contig6594.15301.1 vs. uniprot
Match: A0A6H5JDN6_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDN6_9PHAE) HSP 1 Score: 121 bits (303), Expect = 9.230e-30 Identity = 73/107 (68.22%), Postives = 80/107 (74.77%), Query Frame = 1 Query: 1 APVEDDGDTQT--GGLTLDAIDLRIEPGQLVGVVGPVGSSKSSLLMAVLREIAPENLVGMAAATAAAVDDAGAASADESSGEREAERNVSVQGSLAYASQEPWIQSG 315 A VE+D + + GGLTLDAIDLRIEPGQLVGVVGPVGSSKSSLLMAVLREIAPE+ G+ A+AA A GER +E VSV GSLAYASQEPWIQSG Sbjct: 378 AQVEEDNEAEANAGGLTLDAIDLRIEPGQLVGVVGPVGSSKSSLLMAVLREIAPESAAGVGGASAAE------GGAGHGRGERNSELGVSVLGSLAYASQEPWIQSG 478
BLAST of mRNA_L-elsbetiae_contig6594.15301.1 vs. uniprot
Match: D8LSW3_ECTSI (Multidrug resistance-associated protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW3_ECTSI) HSP 1 Score: 110 bits (276), Expect = 4.060e-26 Identity = 71/106 (66.98%), Postives = 74/106 (69.81%), Query Frame = 1 Query: 1 APVEDDG--DTQTGGLTLDAIDLRIEPGQLVGVVGPVGSSKSSLLMAVLREIAPENLVGMAAATAAAVDDAGAASADESSGEREAERNVSVQGSLAYASQEPWIQS 312 AP E D +T GGLTLDAIDLRIEPGQLVGVVGPVGSSKSSLLMA+LREI PE G A AAVD A GER + VSV GSLAY SQEPWIQS Sbjct: 394 APGEGDNGAETNAGGLTLDAIDLRIEPGQLVGVVGPVGSSKSSLLMAMLREITPERTSG--GAGTAAVD----GGAGHGHGERNCQPLVSVSGSLAYTSQEPWIQS 493
BLAST of mRNA_L-elsbetiae_contig6594.15301.1 vs. uniprot
Match: D8LSW4_ECTSI (Multidrug resistance-associated protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW4_ECTSI) HSP 1 Score: 89.7 bits (221), Expect = 1.080e-18 Identity = 59/108 (54.63%), Postives = 66/108 (61.11%), Query Frame = 1 Query: 1 APVEDDGDTQT--GGLTLDAIDLRIEPGQLVGVVGPVGSSKSSLLMAVLREIAPENLVGMAAATAAAVDDAGAASADESSGEREAERNVSVQGSLAYA-SQEPWIQSG 315 APVE+D + +T GGLTLDAIDLRIEPGQLVGV+GPVGSSKSSLLMA+LREI PE G A TAA V G + +EPWIQSG Sbjct: 444 APVEEDNEAETNAGGLTLDAIDLRIEPGQLVGVIGPVGSSKSSLLMAMLREITPERTSG-GAGTAA------------------------VHGGAGHGHGEEPWIQSG 526
BLAST of mRNA_L-elsbetiae_contig6594.15301.1 vs. uniprot
Match: A0A6H5JDL0_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL0_9PHAE) HSP 1 Score: 81.3 bits (199), Expect = 1.010e-15 Identity = 52/99 (52.53%), Postives = 59/99 (59.60%), Query Frame = 1 Query: 16 DGDTQTGGLTLDAIDLRIEPGQLVGVVGPVGSSKSSLLMAVLREIAPENLVGMAAATAAAVDDAGAASADESSGEREAERNVSVQGSLAYASQEPWIQS 312 + +T+ GLTLDAIDLRIEPGQLVGV+GPVGSSKSSLLMA+LREI PE G AG A+ D +G E EPWIQS Sbjct: 372 EAETKAEGLTLDAIDLRIEPGQLVGVIGPVGSSKSSLLMAILREITPERTSG----------GAGTAAIDGGAGHGHGE--------------EPWIQS 446
BLAST of mRNA_L-elsbetiae_contig6594.15301.1 vs. uniprot
Match: W5JPP8_ANODA (Canalicular multispecific organic anion transporter 1 n=6 Tax=Nyssorhynchus TaxID=44543 RepID=W5JPP8_ANODA) HSP 1 Score: 64.7 bits (156), Expect = 6.570e-10 Identity = 37/92 (40.22%), Postives = 49/92 (53.26%), Query Frame = 1 Query: 40 LTLDAIDLRIEPGQLVGVVGPVGSSKSSLLMAVLREIAPENLVGMAAATAAAVDDAGAASADESSGEREAERNVSVQGSLAYASQEPWIQSG 315 LTLD +DLR++PG LV V+GPVG+ KSSL+ A+L E+ E N+SV G ++YASQEPW+ SG Sbjct: 481 LTLDGVDLRVQPGTLVAVIGPVGAGKSSLIHAILGELPLET------------------------------GNISVNGRVSYASQEPWLFSG 542
BLAST of mRNA_L-elsbetiae_contig6594.15301.1 vs. uniprot
Match: T1DRB9_ANOAQ (Putative wound healing (Fragment) n=1 Tax=Anopheles aquasalis TaxID=42839 RepID=T1DRB9_ANOAQ) HSP 1 Score: 61.2 bits (147), Expect = 7.730e-9 Identity = 35/92 (38.04%), Postives = 48/92 (52.17%), Query Frame = 1 Query: 40 LTLDAIDLRIEPGQLVGVVGPVGSSKSSLLMAVLREIAPENLVGMAAATAAAVDDAGAASADESSGEREAERNVSVQGSLAYASQEPWIQSG 315 LTLD +DL ++PG LV V+GPVG+ KSSL+ A+L E+ E+ N+ V G ++YASQEPW+ SG Sbjct: 180 LTLDGVDLHVQPGTLVAVIGPVGAGKSSLIHAILGELPLES------------------------------GNIRVNGRVSYASQEPWLFSG 241
BLAST of mRNA_L-elsbetiae_contig6594.15301.1 vs. uniprot
Match: UPI0018CE441A (probable multidrug resistance-associated protein lethal(2)03659 n=2 Tax=Teleopsis dalmanni TaxID=139649 RepID=UPI0018CE441A) HSP 1 Score: 61.2 bits (147), Expect = 1.080e-8 Identity = 32/91 (35.16%), Postives = 49/91 (53.85%), Query Frame = 1 Query: 43 TLDAIDLRIEPGQLVGVVGPVGSSKSSLLMAVLREIAPENLVGMAAATAAAVDDAGAASADESSGEREAERNVSVQGSLAYASQEPWIQSG 315 TLD +DLR++PG LV ++GPVG+ KSSL+ ++L E+ PE+ ++ V G+ +YASQEPW+ +G Sbjct: 461 TLDNVDLRVQPGTLVAIIGPVGAGKSSLIQSILGELRPES------------------------------GSIKVNGTFSYASQEPWLFTG 521
BLAST of mRNA_L-elsbetiae_contig6594.15301.1 vs. uniprot
Match: A0A2H4TES8_BACDO (ATP-binding cassette transporter C subfamily member 6 (Fragment) n=1 Tax=Bactrocera dorsalis TaxID=27457 RepID=A0A2H4TES8_BACDO) HSP 1 Score: 60.8 bits (146), Expect = 1.460e-8 Identity = 32/98 (32.65%), Postives = 51/98 (52.04%), Query Frame = 1 Query: 22 DTQTGGLTLDAIDLRIEPGQLVGVVGPVGSSKSSLLMAVLREIAPENLVGMAAATAAAVDDAGAASADESSGEREAERNVSVQGSLAYASQEPWIQSG 315 D+ + TLD ++LR++PG L+ ++GPVGS KSSL+ ++L E+ PE+ + V G+ +YASQEPW+ +G Sbjct: 170 DSNSSEYTLDDVNLRVQPGTLIAIIGPVGSGKSSLVQSILGELRPES------------------------------GTIKVNGTFSYASQEPWLFTG 237
BLAST of mRNA_L-elsbetiae_contig6594.15301.1 vs. uniprot
Match: A0A182TNF1_9DIPT (Uncharacterized protein n=2 Tax=gambiae species complex TaxID=44542 RepID=A0A182TNF1_9DIPT) HSP 1 Score: 60.8 bits (146), Expect = 1.460e-8 Identity = 35/98 (35.71%), Postives = 51/98 (52.04%), Query Frame = 1 Query: 22 DTQTGGLTLDAIDLRIEPGQLVGVVGPVGSSKSSLLMAVLREIAPENLVGMAAATAAAVDDAGAASADESSGEREAERNVSVQGSLAYASQEPWIQSG 315 D + LTLD +DL ++PG LV V+GPVG+ KSSL+ A+L E+ E+ ++ V G+++YASQEPW+ SG Sbjct: 153 DAKATELTLDGVDLHVQPGTLVAVIGPVGAGKSSLIHAILGELPLES------------------------------GSIKVNGNVSYASQEPWLFSG 220 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6594.15301.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6594.15301.1 >prot_L-elsbetiae_contig6594.15301.1 ID=prot_L-elsbetiae_contig6594.15301.1|Name=mRNA_L-elsbetiae_contig6594.15301.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=105bp APVEDDGDTQTGGLTLDAIDLRIEPGQLVGVVGPVGSSKSSLLMAVLREIback to top mRNA from alignment at L-elsbetiae_contig6594:3006..4227- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6594.15301.1 ID=mRNA_L-elsbetiae_contig6594.15301.1|Name=mRNA_L-elsbetiae_contig6594.15301.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1222bp|location=Sequence derived from alignment at L-elsbetiae_contig6594:3006..4227- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6594:3006..4227- >mRNA_L-elsbetiae_contig6594.15301.1 ID=mRNA_L-elsbetiae_contig6594.15301.1|Name=mRNA_L-elsbetiae_contig6594.15301.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=630bp|location=Sequence derived from alignment at L-elsbetiae_contig6594:3006..4227- (Laminarionema elsbetiae ELsaHSoW15)back to top |