mRNA_L-elsbetiae_contig658.15284.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig658.15284.1 vs. uniprot
Match: D8LC52_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC52_ECTSI) HSP 1 Score: 449 bits (1156), Expect = 9.860e-148 Identity = 306/569 (53.78%), Postives = 359/569 (63.09%), Query Frame = 1 Query: 145 GLPLGISTVTST----ISKPDTVMKFSTMAAASGGVCLVVAVFSGPALVFIAVFALGVCGICYSVRQRGALEYLPSGVVDLLTRTTLLEFLTDTSVFDAVKTYLVFMMGLSADETQGVLGSLPDDMRHTLTRPGMMHTLPRPLQDLLLPPGAAV-----AANGQEAVGPRRRRRLAGTEGFAGGSGGSSRE--------------QNDGEEIDAPPLGQLVWNPLRAG---PVPDRAMARGEATGRVDEDDPALSDEGSD-----DSEEEXXXXXXXXXXXXXXXXXXXRSAHWAGGAIGSADNDTRRRPWEEETHR-HATRSLSPVDGRSRTRSRAATDVAEADGGGVQSARRVSSALPEQARRREAAAGWFGRVNGNTAGGGHLEAARAAADEGVPSAERLVASILQASTHYCAGCRQNTGRRVDSAVKAAWSAVDERGVRRAAVGSGVALAAHMAFSERARRQAGAMLRGSFLAALAATATVCAGLVYLKPGESVRGQSASDATDSSDREQPAETEEETGVD----ASTEASGPEEGEERLSRMRRYRNGMRRWLTTVTPSTRNLV 1743 GL LGI+ S ++ P VM+FS++A ASGG+CLVV+VFSG ALVF+AV A+GVCG+CYSVRQRGALEYLPSGV +LLTRTTLLEFLTDTSVFDA+KTYLVFMMGLS DETQGVL SLP+DM++TLTRPG+MHTLPRP QDLLLPP A A +G+E +GPRRR R T+G A G DGEE AP LGQLVWNPL A + GE V + L G D DSEEE R+ G DN TRRRPWE E + HA+RSLSP R+RAATDVAEADG +S+RRVSSALP ARR AGWFGR + N +G AA A VPSAERLVASILQ RRVD AV+ AW+AVDE+GVRRAA+GSG+ALAAH+AFSERARRQAG+MLRGS LAALA TATVCA L YLKPGE R ++AS E G D + T+ E G++ LSR+R +R+G++RW+T V+P+TRN+V Sbjct: 76 GLSLGIANAYSNGVRFMTAPAIVMQFSSLAVASGGMCLVVSVFSGSALVFLAVIAIGVCGMCYSVRQRGALEYLPSGVTELLTRTTLLEFLTDTSVFDAIKTYLVFMMGLSEDETQGVLASLPEDMQYTLTRPGIMHTLPRPFQDLLLPPNARAGVLIGAPDGREVIGPRRRHRGVETQGLAEAGGAXXXXXXXXXXXXXXXXXXHRDGEEGGAPVLGQLVWNPLPASLGQETTNGEEQEGEGEEHVFPQEEELDRAGGDASSSVDSEEERGRSASRHADDGG------RARRNGVDDDGRDDNATRRRPWEAEAYPPHASRSLSPAA----VRNRAATDVAEADG--ARSSRRVSSALPIPARRL-GTAGWFGRTHANGSGNPPGPAATTAGGM-VPSAERLVASILQ--------------RRVDGAVRTAWNAVDEQGVRRAALGSGIALAAHVAFSERARRQAGSMLRGSLLAALAGTATVCASLAYLKPGEGGRERTASXXXXXXXXXXXXXXXXEPGADVVDPSPTQGPRRERGQDTLSRIRGFRDGLQRWMTGVSPTTRNMV 616
BLAST of mRNA_L-elsbetiae_contig658.15284.1 vs. uniprot
Match: A0A1V9YKG7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YKG7_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 5.000e-15 Identity = 49/119 (41.18%), Postives = 74/119 (62.18%), Query Frame = 1 Query: 259 FSGPALVFIAVFALGVCGICYS------------VRQRGALEYLPSGVVDLLTRTTLLEFLTDTSVFDAVKTYLVFMMGLSADETQGVLGSLPDDMRHTLTRPGMMHTLPRPLQDLLLP 579 F+ L+ + +F G G+CY+ + +RG + +LP G+ LL RTTLLE+LTDTS F++++ YL F+M LSA E Q V+ SLP + + L +PG+++ LP +QD LLP Sbjct: 133 FTRRILIALVLFGYGAWGLCYAWTVPLWRWYMYDMCERGLIAHLPEGLQTLLLRTTLLEWLTDTSFFESMQKYLPFLMPLSAPEQQRVVRSLPSESQAMLVKPGLINLLPDVVQDALLP 251
BLAST of mRNA_L-elsbetiae_contig658.15284.1 vs. uniprot
Match: A0A7S1XZ18_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZ18_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 1.620e-13 Identity = 41/94 (43.62%), Postives = 65/94 (69.15%), Query Frame = 1 Query: 298 LGVCGICYSVRQRGALEYLPSGVVDLLTRTTLLEFLTDTSVFDAVKTYLVFMMGLSADETQGVLGSLPDDMRHTLTRPGMMHTLPRPLQDLLLP 579 +G G+ VRQRG LE +P V ++ ++LLE+LTD S F+A++ Y +F++GL+ +ET+ L +LP +++ TL RPG++H LP +Q LLP Sbjct: 87 VGAAGMVLHVRQRGLLELIPERVRTVMLTSSLLEWLTDFSFFNALRPYAIFLLGLNEEETEYALNALPVEVQTTLMRPGVVHLLPDSMQRALLP 180
BLAST of mRNA_L-elsbetiae_contig658.15284.1 vs. uniprot
Match: A0A2D4BM40_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BM40_PYTIN) HSP 1 Score: 68.9 bits (167), Expect = 1.640e-8 Identity = 64/205 (31.22%), Postives = 92/205 (44.88%), Query Frame = 1 Query: 277 VFIAVFAL--GVCGICYS------------VRQRGALEYLPSGVVDLLTRTTLLEFLTDTSVFDAVKTYLVFMMGLSADETQGVLGSLPDDMRHTLTRPGMMHTLPRPLQDLLLPPGAAVAANGQEAVGPRRRRRLAGTEGFAGGSGGSSREQNDGEEIDAPPLGQLVWNPLRAGPVPDRAMARGEATGRVDEDDPALSDEGSDD 849 V IA+ +L G G+ YS +G + LP V LL RTTLLE+LTDT+ D ++ +L F++ LS E VL LP + + LTRPGM+ LP +Q +LLP +G R A T E DG+ + +L + L++ P + G V DP+ + EGS+D Sbjct: 372 VMIAIISLAYGTLGLLYSWSVPAWXWYMEEASAKGLVTLLPESVQHLLLRTTLLEWLTDTTFMDKLRPFLPFLLPLSKAEQNRVLEQLPVETQLMLTRPGMVTLLPDGVQRVLLPASTTGDDDGSAVQDLVARELTART------------EDEDGDAGKEAKVSELTMSALQSAPN----ASAGFDFHHVSSTDPSTAREGSED 560
BLAST of mRNA_L-elsbetiae_contig658.15284.1 vs. uniprot
Match: A0A5D6XP04_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XP04_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 2.020e-8 Identity = 44/118 (37.29%), Postives = 69/118 (58.47%), Query Frame = 1 Query: 277 VFIAVFAL--GVCGICYS------------VRQRGALEYLPSGVVDLLTRTTLLEFLTDTSVFDAVKTYLVFMMGLSADETQGVLGSLPDDMRHTLTRPGMMHTLPRPLQDLLLPPGA 588 V IA+ AL G G+ YS ++G + +LP+ + LL RT+LLE+LTD+S+ + V+ +L F++ LS E +L +P + + TLTRPG++ LP +Q +LLP A Sbjct: 147 VMIALLALAYGALGLAYSWSVPLWRWYLDEASRKGLVAFLPAPLQQLLLRTSLLEWLTDSSMSERVQPFLPFLLPLSRAEQTRLLERMPVESQLTLTRPGLLPLLPESVQRVLLPTAA 264
BLAST of mRNA_L-elsbetiae_contig658.15284.1 vs. uniprot
Match: K3WUF6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUF6_GLOUD) HSP 1 Score: 68.2 bits (165), Expect = 2.090e-8 Identity = 40/121 (33.06%), Postives = 66/121 (54.55%), Query Frame = 1 Query: 292 FALGVCGICYS------------VRQRGALEYLPSGVVDLLTRTTLLEFLTDTSVFDAVKTYLVFMMGLSADETQGVLGSLPDDMRHTLTRPGMMHTLPRPLQDLLLPPGAAVAANGQEAV 618 F+ G G+ YS +G + +LP V +LL RT+LLE++TDT++ D ++ +L F++ LS E +L +P + + LTRPG++ LP +Q LLP + +G + V Sbjct: 178 FSYGALGLVYSWSVPVWRWYLDEATTKGLIAFLPESVQELLLRTSLLEWMTDTTMSDKIQPFLPFLLPLSRAEQTRLLERMPVENQLVLTRPGLLPLLPESVQKALLPSEPSSDDSGDQLV 298
BLAST of mRNA_L-elsbetiae_contig658.15284.1 vs. uniprot
Match: A0A2D4CHS9_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CHS9_PYTIN) HSP 1 Score: 68.2 bits (165), Expect = 2.800e-8 Identity = 46/115 (40.00%), Postives = 63/115 (54.78%), Query Frame = 1 Query: 277 VFIAVFAL--GVCGICYS------------VRQRGALEYLPSGVVDLLTRTTLLEFLTDTSVFDAVKTYLVFMMGLSADETQGVLGSLPDDMRHTLTRPGMMHTLPRPLQDLLLP 579 V IA+ +L G G+ YS +G + LP V LL RTTLLE+LTDT+ D ++ +L F++ LS E VL LP + + LTRPGM+ LP +Q +LLP Sbjct: 383 VMIAIISLAYGTLGLLYSWSVPAWSWYMEEASAKGLVTLLPESVQHLLLRTTLLEWLTDTTFMDKLRPFLPFLLPLSKAEQNRVLEQLPVETQLMLTRPGMVTLLPDGVQRVLLP 497
BLAST of mRNA_L-elsbetiae_contig658.15284.1 vs. uniprot
Match: D0MXH0_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MXH0_PHYIT) HSP 1 Score: 65.1 bits (157), Expect = 1.840e-7 Identity = 32/85 (37.65%), Postives = 55/85 (64.71%), Query Frame = 1 Query: 325 VRQRGALEYLPSGVVDLLTRTTLLEFLTDTSVFDAVKTYLVFMMGLSADETQGVLGSLPDDMRHTLTRPGMMHTLPRPLQDLLLP 579 + RG + +LP + +LL RT+LLE+LTDTS D V +L F++ L+ E ++ +P + + +T+PG++ LP +Q++LLP Sbjct: 161 MHTRGLVGFLPDSMQELLLRTSLLEWLTDTSFSDKVAPFLPFLLPLTRAEQMKLMEQMPPESQVMMTKPGLLPLLPDSVQNVLLP 245
BLAST of mRNA_L-elsbetiae_contig658.15284.1 vs. uniprot
Match: F0WGE4_9STRA (Uncharacterized protein AlNc14C91G5676 n=2 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WGE4_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 8.990e-7 Identity = 36/109 (33.03%), Postives = 59/109 (54.13%), Query Frame = 1 Query: 289 VFALGVCGICYS------------VRQRGALEYLPSGVVDLLTRTTLLEFLTDTSVFDAVKTYLVFMMGLSADETQGVLGSLPDDMRHTLTRPGMMHTLPRPLQDLLLP 579 VF G G+ YS ++G + YLP + LL R +L+E+L+D ++F+++K + F++ L+ E + VL LP + + RPGM++ P LQ LLP Sbjct: 3 VFMYGTTGMLYSWSFLHWKWYIQTFSKKGLIGYLPDSLQHLLLRCSLIEWLSDRTLFESMKALVPFVLPLTESEQKIVLRQLPKSTQRIMCRPGMINFFPTQLQKALLP 111 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig658.15284.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig658.15284.1 >prot_L-elsbetiae_contig658.15284.1 ID=prot_L-elsbetiae_contig658.15284.1|Name=mRNA_L-elsbetiae_contig658.15284.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=581bp AVKASTLPSTPEQPSPGSARRRGAVVRRMRRVCAPKRARREAHAQTRWGLback to top mRNA from alignment at L-elsbetiae_contig658:26970..31980+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig658.15284.1 ID=mRNA_L-elsbetiae_contig658.15284.1|Name=mRNA_L-elsbetiae_contig658.15284.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5011bp|location=Sequence derived from alignment at L-elsbetiae_contig658:26970..31980+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig658:26970..31980+ >mRNA_L-elsbetiae_contig658.15284.1 ID=mRNA_L-elsbetiae_contig658.15284.1|Name=mRNA_L-elsbetiae_contig658.15284.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3486bp|location=Sequence derived from alignment at L-elsbetiae_contig658:26970..31980+ (Laminarionema elsbetiae ELsaHSoW15)back to top |