mRNA_L-elsbetiae_contig6538.15238.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6538.15238.1
Unique NamemRNA_L-elsbetiae_contig6538.15238.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig6538.15238.1 vs. uniprot
Match: D8LC27_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC27_ECTSI)

HSP 1 Score: 325 bits (833), Expect = 5.460e-101
Identity = 193/251 (76.89%), Postives = 207/251 (82.47%), Query Frame = 1 
Query:    1 QATLQERKRDSIKAAEKHKVKEELKQEAKAAAKQIKHGRD-AAGVDKDGGXXXXXXXXXXEEA-AKAKRSRWTTK----GEDDEEPDAEELEAMLEAAGEDSDDDEQMGFLHKQPLAKTGMAATLALLRPSGVLAEKFHRSGRAKDARKHHGEAEETREDRESGAKLEYRDQWGREITRKEAFRNLCYQFHGYGSGKKKQEKRLKVVEXXXXKERAMDLQRLRTLQQTQEITKQAFLVVQGGSHVGAALPP 735
            +ATL+ERKRDSIKAAE+ +VKEEL  EAK A +  +HG+D A  VD   G          E A  KAKRSRWTTK          PDA+E+EAMLE A EDSDDDEQMGFLHKQPLAK GMAATLALLRPSGVL EKFHRSGRAKDARKHHGEAEETREDRESGAKLEYRD+WGREITRKEAFRNLCY+FHGYGSGKKKQEKRLK+VE    KERAMDLQRL+TLQQTQEITKQAF+VVQGGSHVGAALPP
Sbjct:  678 EATLEERKRDSIKAAERTRVKEEL--EAKKAKQGKQHGKDDAMDVDTVKGEGDVKKEAEDEAAKTKAKRSRWTTKKXXXXXXXXXPDADEIEAMLERAEEDSDDDEQMGFLHKQPLAKNGMAATLALLRPSGVLNEKFHRSGRAKDARKHHGEAEETREDRESGAKLEYRDEWGREITRKEAFRNLCYKFHGYGSGKKKQEKRLKLVEEEKKKERAMDLQRLKTLQQTQEITKQAFVVVQGGSHVGAALPP 926
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BLAST of mRNA_L-elsbetiae_contig6538.15238.1 vs. uniprot
Match: A0A836C9M6_9STRA (SART-1 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9M6_9STRA)

HSP 1 Score: 131 bits (330), Expect = 3.750e-31
Identity = 73/143 (51.05%), Postives = 98/143 (68.53%), Query Frame = 1 
Query:  277 GEDSDDDEQMGFLHKQPLAKTGMAATLALLRPSGVLAEKFHRSGRAKDARKHHGEAEETREDRESGAKLEYRDQWGREITRKEAFRNLCYQFHGYGSGKKKQEKRLKVVEXXXXKERAMDLQRLRTLQQTQEITKQAFLVVQG 705
            G D++ D+Q GF+ +QPL ++ MAA L+LL+ SG L  K   +GRAKD R+  GEA +         KLEYRD++GR++TR EAFR L YQFHGYG GKKKQEKRLK ++    +ERA D+  +  L++ QE+T + FLVV G
Sbjct:  656 GSDAEGDDQAGFMLRQPLVRSSMAAALSLLQQSGDLKHKTELAGRAKDKREFAGEAPDDDGSGAGAVKLEYRDEFGRQLTRAEAFRQLNYQFHGYGPGKKKQEKRLKALQEQRMRERAADVSTISALRKVQEVTARPFLVVSG 798
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BLAST of mRNA_L-elsbetiae_contig6538.15238.1 vs. uniprot
Match: A0A7S2XZB3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZB3_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.310e-21
Identity = 65/145 (44.83%), Postives = 93/145 (64.14%), Query Frame = 1 
Query:  328 LAKTGMAATLALLRPSGVLA--EKFHRSGRAKDARKHHGEA---EETREDRESGAK---LEYRDQWGREITRKEAFRNLCYQFHGYGSGKKKQEKRLKVVEXXXXKERAM--DLQRLRTLQQTQEITKQAFLVVQGGSHVGAALP 732
            L + GMAATL++L+ +G L   E   RSGRA+DAR    E    ++ ++D  +G K   +EYRD++GRE+TRKEAFR L Y+FHG+G GKKK++KRLK++      E +   DL  L  L++TQE TKQ ++ + G      A+P
Sbjct:    1 LVRQGMAATLSILKNTGDLKMREVEKRSGRARDARNFPWEKVLDDQEKKDIAAGKKEIKIEYRDEFGRELTRKEAFRQLSYRFHGHGPGKKKEDKRLKILAEERLMESSQRHDLASLDALKKTQEATKQHYVTLSGSGIASVAIP 145
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BLAST of mRNA_L-elsbetiae_contig6538.15238.1 vs. uniprot
Match: A0A6A5ABK5_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ABK5_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.280e-20
Identity = 61/132 (46.21%), Postives = 90/132 (68.18%), Query Frame = 1 
Query:  322 QPLAKTGMAATLALLRPSGVLAE--KFHRSGRAKDARKHHGEAEETREDRESGAKLEYRDQWGREITRKEAFRNLCYQFHGYGSGKKKQEKRLKVVEXXXXKERAMD--LQRLRTLQQTQEITKQAFLVVQG 705
            +PL +TGMAATLALLR  G L +  +  ++GRA D R+ H E E   +D   G KL+YRD++GR +T+KEAFR + Y+FHG+  GKKKQEKRLK ++    +++ +   + R+ TL + Q++ KQA +V+ G
Sbjct:  166 EPLVQTGMAATLALLRNRGDLRDAIQIRQAGRANDHRERHVEEELQIKD---GVKLDYRDEFGRLLTKKEAFRRISYRFHGHTPGKKKQEKRLKQIKEELAQQKNLGNVVGRMETLDKRQKVAKQAHVVLSG 294
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BLAST of mRNA_L-elsbetiae_contig6538.15238.1 vs. uniprot
Match: A0A024TXF0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TXF0_9STRA)

HSP 1 Score: 100 bits (250), Expect = 1.540e-20
Identity = 64/151 (42.38%), Postives = 101/151 (66.89%), Query Frame = 1 
Query:  265 LEAAGEDSDDDEQMGFLHKQPLAKTGMAATLALLRPSGVLAE--KFHRSGRAKDARKHHGEAEETREDRESGAKLEYRDQWGREITRKEAFRNLCYQFHGYGSGKKKQEKRLKVVEXXXXKERAMD--LQRLRTLQQTQEITKQAFLVVQG 705
            +E   ++S+ +++  +  ++PL +TGMAATLALLR  G L E  +  ++GRA D R  H E E   +D   G KL+YRD++GR +T+KEAFR + Y+FHG+  GKKKQEKRLK ++    +++ +   + R++TL + Q++ KQA +V+ G
Sbjct:  615 MEETKDESESEDENSWGVEEPLVQTGMAATLALLRNRGDLKETVQVRQAGRANDHRDKHIEDELQVKD---GVKLDYRDEFGRLLTKKEAFRRISYRFHGHTPGKKKQEKRLKQIKEELMQQKNLGNVVARMQTLDKRQKVAKQAHVVLSG 762
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BLAST of mRNA_L-elsbetiae_contig6538.15238.1 vs. uniprot
Match: A0A2D4C883_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C883_PYTIN)

HSP 1 Score: 99.8 bits (247), Expect = 3.700e-20
Identity = 69/156 (44.23%), Postives = 97/156 (62.18%), Query Frame = 1 
Query:  268 EAAGEDSDDDE--QMGFLHKQPLAKTGMAATLALLRPSGVLAEKF--HRSGRAKDARKHHGEAEETREDRESGAKLEYRDQWGREITRKEAFRNLCYQFHGYGSGKKKQEKRLKVVEXXXXKERAMD----LQRLRTLQQTQEITKQAFLVVQGGS 711
            E   +D DDDE  + G+   QPL   GM ATLALLR +G L E     ++GR  DAR  + E E   +D   G KL+YRD++GR +T+KEAFR + Y+FHG+  GKKKQEKRL+ V      ++A+      + ++ L++ Q+  KQAF+V+ GGS
Sbjct:  539 EVNAKDDDDDEASEQGWGADQPLVGVGMGATLALLRRTGELRETRAERQAGRVNDARDRNVEEELLIKD---GVKLDYRDEFGRLLTKKEAFRLMSYKFHGHKPGKKKQEKRLRQVREELAAQKALSGEGSTKMMKALEKKQQQAKQAFVVLSGGS 691
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BLAST of mRNA_L-elsbetiae_contig6538.15238.1 vs. uniprot
Match: A0A1V9YTX2_9STRA (U4/U6.U5 tri-snRNP-associated protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YTX2_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 4.990e-20
Identity = 61/133 (45.86%), Postives = 89/133 (66.92%), Query Frame = 1 
Query:  319 KQPLAKTGMAATLALLRPSGVLAEKFHRS--GRAKDARKHHGEAEETREDRESGAKLEYRDQWGREITRKEAFRNLCYQFHGYGSGKKKQEKRLKVVEXXXXKERAMDLQRLRTLQQTQEITKQAFLVVQGGS 711
            ++PL ++GMAATLALLR  G L E+   S  GRA D R  +   E   +D   G KL+YRD++GR +T+KEAFR L Y+FHG+  GKKKQEKRLK ++    ++++    ++++L + Q+ TKQA LV+  G+
Sbjct:   13 EEPLVQSGMAATLALLRNRGDLREELQLSQAGRANDQRDRNINDELQIKD---GVKLDYRDEFGRLLTKKEAFRQLSYRFHGHQPGKKKQEKRLKQLKEELSQKKSSVSIKMQSLDRRQKQTKQAHLVLSEGT 142
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BLAST of mRNA_L-elsbetiae_contig6538.15238.1 vs. uniprot
Match: A0A6G0XHW3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHW3_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 5.780e-19
Identity = 61/137 (44.53%), Postives = 95/137 (69.34%), Query Frame = 1 
Query:  307 GFLHKQPLAKTGMAATLALLRPSGVLAE--KFHRSGRAKDARKHHGEAEETREDRESGAKLEYRDQWGREITRKEAFRNLCYQFHGYGSGKKKQEKRLKVVEXXXXKERAMDL--QRLRTLQQTQEITKQAFLVVQG 705
            G+  ++PL ++GMAAT+ALLR  G L +  +  ++GRA D R+   E E T +D   G KL+YRD++GR +T+KEAFR + Y+FHG+  GKKKQEKRLK ++    +++ +    QR++TL++ Q++ KQA +V+ G
Sbjct:  573 GWGVEEPLVQSGMAATIALLRNRGDLKDHIQVRQAGRANDYREKDVEDELTIKD---GVKLDYRDEFGRLLTKKEAFRRISYRFHGHTPGKKKQEKRLKQLKEELAQQKNLGSVEQRMQTLEKRQKVAKQAHVVLSG 706
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BLAST of mRNA_L-elsbetiae_contig6538.15238.1 vs. uniprot
Match: K3X7K3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7K3_GLOUD)

HSP 1 Score: 91.3 bits (225), Expect = 7.790e-19
Identity = 59/137 (43.07%), Postives = 92/137 (67.15%), Query Frame = 1 
Query:  319 KQPLAKTGMAATLALLRPSGVLAEKF--HRSGRAKDARKHHGEAEETREDRESGAKLEYRDQWGREITRKEAFRNLCYQFHGYGSGKKKQEKRLKVVEXXXXKERAMD----LQRLRTLQQTQEITKQAFLVVQGGS 711
            +QPL  +GMAATLALLR +G L E     ++GRA DAR  + + E   +D   G KL+YRD++GR +T+KEAFR L Y+FHG+  GKKK+EKRLK ++     ++ +      + ++ L++ Q++++QA +V+ GG+
Sbjct:   66 EQPLVGSGMAATLALLRKTGDLRETRVERQAGRANDARDRNVDEELRIKD---GVKLDYRDEFGRLLTKKEAFRMLSYKFHGHEPGKKKKEKRLKQLKEELEAQKMLSGEGSTKMMKVLEKKQKVSQQAHVVLSGGT 199
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BLAST of mRNA_L-elsbetiae_contig6538.15238.1 vs. uniprot
Match: A0A485L1Q9_9STRA (Aste57867_14843 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L1Q9_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.050e-18
Identity = 61/133 (45.86%), Postives = 91/133 (68.42%), Query Frame = 1 
Query:  319 KQPLAKTGMAATLALLRPSGVLAEKFH--RSGRAKDARKHHGEAEETREDRESGAKLEYRDQWGREITRKEAFRNLCYQFHGYGSGKKKQEKRLKVVEXXXXKERAMD--LQRLRTLQQTQEITKQAFLVVQG 705
            ++PL ++GMAATLALLR  G L +K    +SGRA D R+   E E   +D   G KL+YRD++GR +T+KEAFR + Y+FHG+  GKK+QEKRLK ++    +++ +    QR++TL++ Q+  KQA +V+ G
Sbjct:  558 EEPLVQSGMAATLALLRNRGDLNDKIQVRQSGRANDHRERDIEDELQVKD---GVKLDYRDEFGRLLTKKEAFRRISYRFHGHTPGKKRQEKRLKQIKEEIAQQKNLGNVAQRMQTLEKRQKAAKQAHVVLSG 687
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6538.15238.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC27_ECTSI5.460e-10176.89Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C9M6_9STRA3.750e-3151.05SART-1 family-domain-containing protein n=1 Tax=Tr... [more]
A0A7S2XZB3_9STRA1.310e-2144.83Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A6A5ABK5_9STRA1.280e-2046.21Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A024TXF0_9STRA1.540e-2042.38Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A2D4C883_PYTIN3.700e-2044.23Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A1V9YTX2_9STRA4.990e-2045.86U4/U6.U5 tri-snRNP-associated protein (Fragment) n... [more]
A0A6G0XHW3_9STRA5.780e-1944.53Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
K3X7K3_GLOUD7.790e-1943.07Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A485L1Q9_9STRA1.050e-1845.86Aste57867_14843 protein n=1 Tax=Aphanomyces stella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6538contigL-elsbetiae_contig6538:3817..10856 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score333.2
Seed ortholog evalue1.1e-88
Seed eggNOG ortholog2880.D8LC27
Preferred nameSART1
KEGG koko:K01301,ko:K11984,ko:K12811,ko:K12836,ko:K12858
KEGG Pathwayko03040,ko05131,map03040,map05131
KEGG ModuleM00354
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000387,GO:0000398,GO:0000481,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005737,GO:0005794,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0012505,GO:0015030,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016604,GO:0016607,GO:0019222,GO:0022407,GO:0022409,GO:0022607,GO:0022613,GO:0022618,GO:0030155,GO:0030532,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045292,GO:0045580,GO:0045582,GO:0045583,GO:0045585,GO:0045595,GO:0045597,GO:0045619,GO:0045621,GO:0045785,GO:0046483,GO:0046540,GO:0048518,GO:0048522,GO:0050789,GO:0050793,GO:0050794,GO:0050863,GO:0050865,GO:0050867,GO:0050870,GO:0051094,GO:0051239,GO:0051240,GO:0051249,GO:0051251,GO:0060255,GO:0065003,GO:0065007,GO:0070013,GO:0071005,GO:0071011,GO:0071013,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0097525,GO:0097526,GO:0120114,GO:1901360,GO:1901363,GO:1902105,GO:1902107,GO:1902494,GO:1903037,GO:1903039,GO:1903706,GO:1903708,GO:1990904,GO:2000026
EggNOG free text desc.maturation of 5S rRNA
EggNOG OGsKOG2217@1,KOG2217@2759
EC3.4.17.21,3.6.4.13
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03041,ko04121
Ec32 ortholog descriptionSART-1 protein
Ec32 orthologEc-20_004200.1
Exons6
Model size765
Cds size765
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6538.15238.1prot_L-elsbetiae_contig6538.15238.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6538 3817..10856 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816722.049572-CDS-L-elsbetiae_contig6538:3816..39311622816722.049572-CDS-L-elsbetiae_contig6538:3816..3931Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6538 3817..3931 -
1691683765.113598-CDS-L-elsbetiae_contig6538:3816..39311691683765.113598-CDS-L-elsbetiae_contig6538:3816..3931Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6538 3817..3931 -
1622816722.0634143-CDS-L-elsbetiae_contig6538:6007..61081622816722.0634143-CDS-L-elsbetiae_contig6538:6007..6108Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6538 6008..6108 -
1691683765.128107-CDS-L-elsbetiae_contig6538:6007..61081691683765.128107-CDS-L-elsbetiae_contig6538:6007..6108Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6538 6008..6108 -
1622816722.0811574-CDS-L-elsbetiae_contig6538:7509..76651622816722.0811574-CDS-L-elsbetiae_contig6538:7509..7665Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6538 7510..7665 -
1691683765.1363695-CDS-L-elsbetiae_contig6538:7509..76651691683765.1363695-CDS-L-elsbetiae_contig6538:7509..7665Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6538 7510..7665 -
1622816722.0929117-CDS-L-elsbetiae_contig6538:8115..82051622816722.0929117-CDS-L-elsbetiae_contig6538:8115..8205Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6538 8116..8205 -
1691683765.1447473-CDS-L-elsbetiae_contig6538:8115..82051691683765.1447473-CDS-L-elsbetiae_contig6538:8115..8205Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6538 8116..8205 -
1622816722.106937-CDS-L-elsbetiae_contig6538:9406..95031622816722.106937-CDS-L-elsbetiae_contig6538:9406..9503Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6538 9407..9503 -
1691683765.1526132-CDS-L-elsbetiae_contig6538:9406..95031691683765.1526132-CDS-L-elsbetiae_contig6538:9406..9503Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6538 9407..9503 -
1622816722.119892-CDS-L-elsbetiae_contig6538:10650..108561622816722.119892-CDS-L-elsbetiae_contig6538:10650..10856Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6538 10651..10856 -
1691683765.1607091-CDS-L-elsbetiae_contig6538:10650..108561691683765.1607091-CDS-L-elsbetiae_contig6538:10650..10856Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6538 10651..10856 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6538.15238.1

>prot_L-elsbetiae_contig6538.15238.1 ID=prot_L-elsbetiae_contig6538.15238.1|Name=mRNA_L-elsbetiae_contig6538.15238.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=255bp
QATLQERKRDSIKAAEKHKVKEELKQEAKAAAKQIKHGRDAAGVDKDGGG
KDGGEAEDGEEAAKAKRSRWTTKGEDDEEPDAEELEAMLEAAGEDSDDDE
QMGFLHKQPLAKTGMAATLALLRPSGVLAEKFHRSGRAKDARKHHGEAEE
TREDRESGAKLEYRDQWGREITRKEAFRNLCYQFHGYGSGKKKQEKRLKV
VEEEKKKERAMDLQRLRTLQQTQEITKQAFLVVQGGSHVGAALPPPPPSL
ELKKK
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mRNA from alignment at L-elsbetiae_contig6538:3817..10856-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6538.15238.1 ID=mRNA_L-elsbetiae_contig6538.15238.1|Name=mRNA_L-elsbetiae_contig6538.15238.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7040bp|location=Sequence derived from alignment at L-elsbetiae_contig6538:3817..10856- (Laminarionema elsbetiae ELsaHSoW15)
CAGGCCACCCTCCAGGAGCGCAAGCGCGACAGCATCAAGGCCGCCGAGAA
GCACAAGGTCAAGGAAGAGCTCAAGCAGGAGGCGAAGGCAGCAGCAAAGC
AGATCAAGCACGGACGGGACGCCGCAGGGGTAGACAAAGACGGCGGCGGC
AAGGATGGGGGCGAGGCAGAGGACGGGGAAGAGGCGGCGAAGGCCAAACG
TTCGAGGTTGGTCTTGTACTTTTAACGCCGTTTTTTTGCAATTTTTTTGC
AATTTTTTTTTTAATCTATTTAAGGTAGTGTTATATGTCGGTGTGTCTTC
GTCTGTATCTGTGTCTGTGTCTGCGTCTTGTGTGTTTTGTTTCCAAATGT
TTGTACTCCCAGGCACCTGTGCGCGAGCGTAATCGTCAGCAGGGTTTTGA
TGCAAGGACACACACAGCAGTAGGTCACAAGAGGAACGAGTTGACAACCC
AGCATCTGGTAGACACGACTCAGCGAAGGAGGAGGACGTCCGTACTCCAT
CTTGATGCTGTTATGACGCAGCCGGTTGTTACAAAAATAAAATAAAAAAC
TCGGTCCTGACTGGTCGGTCTGTTGGTGAGACCAGGAAGGTTGAAAAGCT
TGTGGAGTTTTGACACCCAGTTCCTTGTGGTGCAATCGATCTTTAAATGT
TCTCGGCGTGAAAAGTCCGCGCTGATCGACCGGCGGGATGTGGGTAAAAA
AAGTGCCCAGGATATTATTTCCCCAGCAGCACAGTTGTATTTGTACATGT
GAATTTGTACCATTGTAGCCGGGGGTGTGGAGGATAAGGGTTAAATAGCA
TGTCTACAACCGGCCCCCCGGAAACATGTGTGTTTTTCATGGGTTGGACG
TGCATAGATTCCTGACGTTTATTATTCAATGCTAGAATACAGATGGTATT
GGACTGGATGTGGCGTTTGTGGCGGATGGTTTTTGGGTTGAGCTATCGGG
CGAGTATTTTTTGTTCTCTCGTCTGTCTGTTCGCTTCTCTCCCATGGCTG
TCTTCGGTGCTTTGGGTGTGTTTTGGTGTTTGACACGGGCTTGTCTGATA
CCCACACAATAAGTAGATTTGTCCGGTGTTATATAGAAGTATTAAGTATG
TACCTACATTTTATTTTATTGTTTCCCTCCCATTATTGGCAGACTGGTCG
TCTGCCCCACTGGCCCCCATACTCCACTACGACTAGCTAGACGACCCAAC
CGGGGTCACACAGGAGTGTGGGTGCTTGCATTTTTTGTGGTTGGTTCAGC
GCACAGCACTCACCGACTGTTTTTTTATTTTTTCAATTTTTCATTTTTTT
TTCGTTTGTGTGTGCTTGTATCTATGTCTCCTCCGTATGTAATTGCGAAC
CAGGTGGACGACGAAGGGAGAAGACGACGAAGAGCCCGACGCCGAAGAAC
TGGAAGCCATGCTGGAAGCGGCGGGGGAGGACAGCGATGACGACGAACAG
GTAAATAAAGGGTGTAAGGGCGTGTAATCTCCTAGACACCGTTGGAGGGT
CCGATCCCTCAGCTCCTGTGATACAGAAGCTCTCCTGGAGCAATAGCCGT
GTGGGGGAAGCACCGGACGGGTGCTGGACAGTGACAGTTGGGCACCGGAC
AGGTGCAAGACAGTGACAGGACAGAAGGGAAGAGGTGGTTCTTGTGGTCT
CCGGACGGAAGGGAGGAGAGGGCAAGAGGAGTGAGCGTGTGGGGCGCGAG
GCGAGGGCGGAGCCCGCTGCCAGCGCAGACGCAGGACTGAATCACTCTGC
CTCTGGGCTGGCACGCTGACGACGTGGCAGAGAGGACAGAAACGCCCCGC
TAGGCGGGGTAACACGCGCGTGCGTCGATGATGGGAGACGAACGCGAAAG
GGCGCGCATACAAGGGCGCGTAAAAGTTGTCCCGCTGGTTGTTGTAGGTT
ACAGCACAGAGGTGACTCACAGGTGGACGGGGTTAAAATAGGCGAAGAAA
AAAAAACAGATGAGAGGAGAGAGAGATTTGTTCTCGTGCCATTTGGGCTA
TCGTCTGTCTGTCTTGTTCTATTCGTCGTTCTTTTTCCACCTCGGAATGG
TTGCTGTAAGATCTACATAGCTCTTGCGTATGGTAGCTTCATGCAGATCC
AAGGCTTTAGTAGTGAGCGATGGCACCATAAATACTAGTTGCATCTTTAT
GGGGTGCTCTTATATGTACCATGGCGATGGATAAGAGTCAATACTGATGA
GTCCCACGTGTTTTTAACCACGTCGTGGTGGAGTAAGACCGCTAAATACA
TGTTGAAGTTTTTTTTCTCTACCCTGGTACTTCACCTGCGCGGTCTACCT
CGTACACCCTGTGAATAAGTCGTTACATGGGGGGCTGCTTGGTTATGAAT
CACGCACAACCCAGGGCCGGCTAAGCATATACTACGAAGTATGAAACTGA
TATGTTTGTTTTCATCACGCGCAAGTACTATCTATCTATAATGCACGCAC
GAAACCCGCTCCCGGTGCTCTGAATGAAGACTACGGGCCAGGCAGGTCAC
GGTTAAGCCCCGCCCCGCCCCGCCCCGCCCCCTCCGGGCATTGTCTATGC
GTTGGTCAATTGAGTTGATCCCTCCCTTACCGCACCCCGATGGGAACGAA
CCCTTATGTGCATGTGTGTGTGTGTGTACCATTTTCCTTCCTCTTGATCA
GATGGGGTTCTTGCACAAGCAGCCCCTGGCGAAGACCGGCATGGCGGCGA
CCTTGGCTCTGCTCCGGCCGTCGGGAGTGCTCGCTGAAAAGGTGCGGTCC
GCCGCCGCCGCCTTCCGGAAGATAGATACATAACCCTATGCACATGTACT
TCTACCTACATACAGCCGTTGACATTTTTTTTTTTTTTCACCGGATGAAC
CGTCTGCATCAGAGTAGTTTCACGTGCTTCAGGAGTGGGCGTGGTCCGAT
TTCGAATACAATTGTATTAATTGTACATAATACGCGAAAATCGGCGGCGC
TCTCTCTCGCCGAGGCTGTTTTGCTACCTGCCCTGCGCTGATTCCATTCC
CGGAAGACCAACCGATCTCATCTGTCCCCCCCCACCCACCCACCCACCCA
CCTGCCTGACTTAGGATGCTTGTTGCGTCGCCCCCCCTCCCCCCCCTGCC
TGTGCTGCTGCTTGTGTTTTGGATGGAATGGAATGGAATGGAATGGAATG
GAATGGAATGGAATGGAACGGAACGTGGCTGTCGTGTCCAGTTCCACCGA
TCGGGTCGGGCGAAGGACGCGAGAAAGCACCACGGAGAAGCGGAGGAGAC
CCGCGAAGACCGAGAGTCGGGGGCCAAGCTGGAGTACCGCGACCAGTGGG
GGAGGGAGATCACCAGGAAGGAGGCCTTCCGAAACCTGTGCTACCAGGTG
CGTGTGTTTTTGGCCGTGTATGTAGACCACGGTTCAGTACTCTGGCAAGA
CGTCCTCGTGACAAGCAGGAGTCCATCGAGCACTGGAAATAAATGTGAAA
AAGAAGAAGAAAAAAAAATGTACACATGTATTGTAGGGTGTCGTGCTTTT
TGGGCGACGCCATGGTTTTACGAGCTTGCCGCACGAAAAAGACAAAACGT
GGGTCATGCTGTTATGATGCTGCGTGCTGGAGCCGCGCAAGTGCCCGTTC
GTGTTGGCAGCGCGAGCTGCACGTCTTGTACGAGCTGCGATTGATTGAAT
GTCGCTGTTTTGTGACCGCGAGTGCGTGTCCACACATGCTGCCCGCTGTT
GTTGTACCGGGGGTATGTACACATAGCTGTCATAGTTTGTGTTCCTGCGG
GGTGACCGTGTCAGCGGTCAGAGGCGGTGGGTAGGTGAATGCGTAAATAG
ATTAATCGCCCCCCCGCCCGAGTATTGTCGTGGCACGTCACTTTCTGTCG
GTCGGCAAGTATGTAGGAGAAAATAGCGATGTTTGGTCACTTTGTACTGT
TAAACTGGAGATGTCTCTCATCTCGATAAGTATTTCGTCGCGGTGTAGTG
TGTGTTTGTTGGCAAGGCTTTTGACGATGATGAAAACGGTTTGCACCGCC
GCCGCCGTCGTGGGTTGTGGGGTCACGCAGATATCGCCCTGTCCGCCACG
AGAGAGTGAGAGAGTGGCCTTGCCGACTGGCAACACGGGCGTGTTTTCAA
CGCTTCCTTTCGTTCCACGCTCTCCTCTCGCGAGTGTTGTCCCGCCTTTC
ACAAGCTGGCTGTGTCGGTACACATGTACATACCGACGGCACTATGCATA
CATACATCGTCTATGTAGCTGTTGGGTTTTTTTTCGTCAAAGCGTTCTTC
ATTTGTTTCCGACCATTGATTGGCCGATGGCCATCTTCTAGGCAAACCTG
CATTAGATAAATAAATAGTTGTGTCTGCCTTGCCTCCCCCCCCCGCGACA
GATGAACGACCCGTGAATCAACCTCACCTCTCTCGTGCGCATGGCGTCTT
CATGTCTCAAATTATTACCCTCGGATGCATGCATACATGTACATACATAA
ATTATGTACACACGAAGTTCGTAACCACGTGCGCGCCGTGATCCGCTGTG
CCGCTTTTTTTCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGG
TCCCGGGGGCGGGTGCGGGCAAGAAGAAAAGAGAGAAGGGGGGCGAGGGG
GTGGGGGGGGAGAGGAAAAAANNNNNNNNNNAAACATTAAAAAAATAAAT
TTATAAACACAGGGTGTGGGGCCCCTGTGGGGGGGGGTGGGGGGGGGGGG
GGGTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGTCGGACGGAGAGCAGTT
CCACGGTTACGGTTCCGGCAAGAAGAAGCAAGAGAAGCGGCTCAAGGTTG
TCGAGGAGGAGAAGAAAAAAGAGAGGGCCATGGACCTCCAGCGGCTCAGG
TAAATAAATACTTCGAAGTATGTTTTTCTGCTCGCTTCGCCAAACATTAC
GTCACTGTTGTATGGAATACCGCTTGAACCACATATCGAGTCTTTGCTCT
AGTGTAGCTTAGGTCCCATCTTTGATTCTTTGTTTATTTTTAAATATACA
TGCAATCAATCCTACATAATATGTACAAGGTTGTGCCGCTTACGCGGCCC
CGCTTGATTGCAAGCGAGTCCAAGGCAGCGCTAAATATCTACTTCCTTCC
TATGGAGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTCGAACAG
AGTGTAGGTGTGTGTGTGTGGAATGTAAACACTAACCAACAGCAGCATCA
GTTGCTTTTTATACTTCCGAAAAACACGCGTCAGCAGGGAGGCCAATGCA
CACTTCCCTCCCCAGCGACCTCATGTAGAGTGCACGTGGAAAGGAGGCGC
AAGCAAACCTGCTGTCCTCTTTGTATTTGACGGCGCTGCCGCGAGTGTAT
CCGCGTGTGTGCACACAACAAATACACATCATATGGGAACACGCCGGAAG
TTAGTGACGCCAATAATAGTGCGGCTCCAGTGACACAAACAACGGCCCGC
GCGTCCCTTGGGCGAGAAGTAAAAAAAAAAAATGCAACTGCTCTGCATAC
ATATCTAAACGCGAGAAGAGAGAAAGAGACAGAGAGATAGAAAGAGGAGA
GGACTAACACTGGAAGGGTGTGTAGCAGTAGGGGTGTGTGTGTGTGAGAG
AGAGAGAAAGCGAGAGATGGAAAGCGGTGCAGCCCTTTTGGCGAGCAAGT
TCGGGTTTTCAAAAATCGAACTGCTCCCAAAGGCCAGGAAATCCAGCTCT
TTGACGCCATGCACAGCGGTTCGAAAGAGGCAAAGAGAGACAGAGAGAGG
AGGATTAACTGCGGGTGTGTAGCAGTAGGTAGCAGTAGGGGGTGGTCAGA
GAGAGAGAGAAAGAGAGAGGTGGGAAGCGGTGCACAGCCCTTTACAGAGC
GAGCGGAGGAGCGTTCAAGATCCCAGATTCCCGTCCCAACGGGTCACAAA
TGGAGACCGCACAGGGCTCGAAAAGTCCGAAATACTGCTGCGCACACAGG
CGCCGAGAGGCGGTGAAATGCACCGATCTCAGAAAAAAAAATTAAATCTT
AATAGATTTATATTTTTATGTGTACAAATTATAAACATCTGTGTGTGTGT
GTTTTTGACACGTCTTGTTGGCGATCGACCGCTCTGCTCTCTCAAGCCGG
TCGGTGTGTATTTGTCGCGTTGGTTTTGGCCTCGCTTTGGCGTCGGCAAC
GAACACCGATGGCTCTTGCTGCCTGTCGTCGCCGGTCAAGGCGCTCGCTC
TAATCTATGTTGTGCTGTGCGGTGATATGTATGTACAATTAAGGTTGTAT
GTAGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAAATA
ATTTTTTCCCCCCCCCCCCCCCCGGGGGCGGTTTTTTAGAAAAATGCGGC
AAAAAGGGGGGGTCCCAAAAAANNNNNNNNNNGTGGGGGGGGGGGGGGGG
GGGGTGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGTGGGGTGGGGG
GGGGCGCTTGGAGGCCTGGCGTGAAATCATTGTTACACCGCGCGCACCTG
CAGAGGCCGTTTTTACGACAATTGCAGCAAAAGAGGCGTTTGCATGAAAA
AAACAAAAACAAAGGCAAACGCATATGTAAGCGTGCCGAAGCGGGTTCGC
GTCAGTGGCGTCTTTCAAAAGCTACACTACAATATAAGGTTGCCTTGGGT
CCCGTTCTTCCTCCGGACGTGCCTGTGTAACGAAGATGATGACAGCGTTG
ACGGACGGGTCCGTCCGCCAACCTGCACTTCCCGAGCAAAAGCATTCGAT
GCCTGCCCCTTCCTTTTTTTGCCTTGGGCACCGCTGTGCTTTTCGGTGGC
CCTGCATGCCTGCCTACCTGCCTGCCTGCCTGCCAGCCTGCCTGCCTGCC
AGCCTGCCAGCCCTTTTACTATTTTGTTCGTGTATAATTTTCCGCGTCTT
TCTCTCTTTTCCGTAAAATCAACAGGACGCTGCAACAGACCCAGGAGATC
ACGAAGCAGGCGTTTTTGGTGGTTCAGGGAGGCTCCCACGTGGGGGCGGC
GCTTCCCCCGCCCCCGCCCAGCCTGGAGCTGAAGAAGAAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6538:3817..10856-

>mRNA_L-elsbetiae_contig6538.15238.1 ID=mRNA_L-elsbetiae_contig6538.15238.1|Name=mRNA_L-elsbetiae_contig6538.15238.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1530bp|location=Sequence derived from alignment at L-elsbetiae_contig6538:3817..10856- (Laminarionema elsbetiae ELsaHSoW15)
CAGGCCACCCTCCAGGAGCGCAAGCGCGACAGCATCAAGGCCGCCGAGAA
GCACAAGGTCAAGGAAGAGCTCAAGCAGGAGGCGAAGGCAGCAGCAAAGC
AGATCAAGCACGGACGGGACGCCGCAGGGGTAGACAAAGACGGCGGCGGC
AAGGATGGGGGCGAGGCAGAGGACGGGGAAGAGGCGGCGAAGGCCAAACG
TTCGAGCAGGCCACCCTCCAGGAGCGCAAGCGCGACAGCATCAAGGCCGC
CGAGAAGCACAAGGTCAAGGAAGAGCTCAAGCAGGAGGCGAAGGCAGCAG
CAAAGCAGATCAAGCACGGACGGGACGCCGCAGGGGTAGACAAAGACGGC
GGCGGCAAGGATGGGGGCGAGGCAGAGGACGGGGAAGAGGCGGCGAAGGC
CAAACGTTCGAGGTGGACGACGAAGGGAGAAGACGACGAAGAGCCCGACG
CCGAAGAACTGGAAGCCATGCTGGAAGCGGCGGGGGAGGACAGCGATGAC
GACGAACAGGTGGACGACGAAGGGAGAAGACGACGAAGAGCCCGACGCCG
AAGAACTGGAAGCCATGCTGGAAGCGGCGGGGGAGGACAGCGATGACGAC
GAACAGATGGGGTTCTTGCACAAGCAGCCCCTGGCGAAGACCGGCATGGC
GGCGACCTTGGCTCTGCTCCGGCCGTCGGGAGTGCTCGCTGAAAAGATGG
GGTTCTTGCACAAGCAGCCCCTGGCGAAGACCGGCATGGCGGCGACCTTG
GCTCTGCTCCGGCCGTCGGGAGTGCTCGCTGAAAAGTTCCACCGATCGGG
TCGGGCGAAGGACGCGAGAAAGCACCACGGAGAAGCGGAGGAGACCCGCG
AAGACCGAGAGTCGGGGGCCAAGCTGGAGTACCGCGACCAGTGGGGGAGG
GAGATCACCAGGAAGGAGGCCTTCCGAAACCTGTGCTACCAGTTCCACCG
ATCGGGTCGGGCGAAGGACGCGAGAAAGCACCACGGAGAAGCGGAGGAGA
CCCGCGAAGACCGAGAGTCGGGGGCCAAGCTGGAGTACCGCGACCAGTGG
GGGAGGGAGATCACCAGGAAGGAGGCCTTCCGAAACCTGTGCTACCAGTT
CCACGGTTACGGTTCCGGCAAGAAGAAGCAAGAGAAGCGGCTCAAGGTTG
TCGAGGAGGAGAAGAAAAAAGAGAGGGCCATGGACCTCCAGCGGCTCAGT
TCCACGGTTACGGTTCCGGCAAGAAGAAGCAAGAGAAGCGGCTCAAGGTT
GTCGAGGAGGAGAAGAAAAAAGAGAGGGCCATGGACCTCCAGCGGCTCAG
GACGCTGCAACAGACCCAGGAGATCACGAAGCAGGCGTTTTTGGTGGTTC
AGGGAGGCTCCCACGTGGGGGCGGCGCTTCCCCCGCCCCCGCCCAGCCTG
GAGCTGAAGAAGAAGGACGCTGCAACAGACCCAGGAGATCACGAAGCAGG
CGTTTTTGGTGGTTCAGGGAGGCTCCCACGTGGGGGCGGCGCTTCCCCCG
CCCCCGCCCAGCCTGGAGCTGAAGAAGAAG
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