mRNA_L-elsbetiae_contig653.15227.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig653.15227.1 vs. uniprot
Match: D7FRE8_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE8_ECTSI) HSP 1 Score: 476 bits (1226), Expect = 1.110e-140 Identity = 259/411 (63.02%), Postives = 304/411 (73.97%), Query Frame = 3 Query: 1059 SEDVPEGMPGTYEHLGCFKDDKDDRVLKRSKLGSPEMIADVCFQYCSQRGAAYMALQFGYECWCSRNGLLEYERHGEGAVCDYACLGDENEICGGFDAFDLFKLWWPSEPEDPEYVGCYADDKEDRVMSHKVTIPGMTTAVCREHCSDKGAPYYGTQYATECWCGTSDNEADYERHGEGSCFMGCDGDEGVACGGYDSYSLFKYGDG-ETPTTAPTTDMP-------TSTDXXXXXXXXXXXXXXXXXXXXXXXXXX---------ASMCSNSVPGIESPKGACCVAACGQCGGIGCSTVALDLGLGSAECCEGTILLANEPCGEAPCVVGDDVPETEPPVSPTPTTTTPPATETLSPLVATPSGECEGDPVAVYEQCGGSTWKGSTCCEDGLECVVMGKSACYSQCRPVD 2240 SE P G PG YEH+GCF+D + DRVL+RS L S +M A++C++ CS +GAAYMA Q+G ECWCSR+G L+Y+RHG+ VCDY C GDE+E CGG +F+L++L W PED EYVGCY D+K DRV+S ++ MT AVCREHC+DK APYYGTQ+++ECWCGTSD++ADYERHGEG C M C GD VACGGYD+YSLFKY +G E PTTAP TD P T+T XXXXXXXXXXXXXXXXXXXXXXXXXX S CSN VPGIE+ KGACCVAACGQCGG GCSTVA DL LGS ECCE +L AN PCGEAPCV+G D P +P+P T P + P+GEC G+PV +EQCGG W GSTCCE+GLECV MGKS CYSQCRP++ Sbjct: 1134 SESEPGGRPGAYEHVGCFQDSQSDRVLQRSGLISGDMTAELCYETCSTKGAAYMATQWGVECWCSRDGSLDYDRHGDTGVCDYPCRGDESETCGGVHSFNLYRLSWAPAPEDEEYVGCYTDNKGDRVLSDMISSDDMTAAVCREHCADKDAPYYGTQFSSECWCGTSDDDADYERHGEGVCHMACSGDGTVACGGYDAYSLFKYDNGGEAPTTAPVTDSPDTPTMAPTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSMPTTSTCSNGVPGIETSKGACCVAACGQCGGDGCSTVASDLELGSDECCETAVLDANRPCGEAPCVIGGDFPAP----TPSPETAAPVXXXXXXXVSTAPTGECSGEPVEAWEQCGGDGWTGSTCCEEGLECVFMGKSTCYSQCRPME 1540
BLAST of mRNA_L-elsbetiae_contig653.15227.1 vs. uniprot
Match: A0A6H5JJ37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ37_9PHAE) HSP 1 Score: 427 bits (1099), Expect = 1.880e-125 Identity = 301/668 (45.06%), Postives = 346/668 (51.80%), Query Frame = 3 Query: 306 TDMPAMAPTAEEGVCSNGVRGIESK--GACCVFECGQCGGPGCSTVGESLGLGAADCCESTVLANNEPCG---EAPCVIGDGTGXXXXXXXXEMPAEMPVAPXXXXXXXXXPVEMXXXXXXXXXXXXXXADXXVXXXVAXXXXXXXXXXXAPIDSPTPTMXXXXXXXXXXXXXXXXXXXXXXXXXXXADXXXXXXXXXXXXXXXXXXXVTAPTGGXXXXXXXXXXXXXXXXXXXXSETSYLPSSDTDTYDDGTGVDSEDVPEGMPGTY-EHLGCFKD-DKDDRVLKRSKLGSPEMIADVCFQYCSQRGAAYMALQFGYECWCSRNGLLEYERHGEGAVCDYACLGDENEICGGFDAFDLFKLWWPSEPEDPEYVGCYADDKEDRVMSHKVTIPGMTTAVCREHCSDKGAPYYGTQYATECWCGTSDNEADYERHGEGSCFMGCDGDEGVACGGYDSYSLFKYGDG-ETPTTAPTTDMP-TSTDXXXXXXXXXXXXXXXXXXXXXXXXXXA---------------SMCSNSVPGIESPKGACCVAACGQCGGIGCSTVALDLGLGSAECCEGTILLANEPCGEAPCVVGDDVPETEPPVSPTPTTTTPPATETLSPLVATPSGECEGDPVAVYEQCGGSTWKGSTCCEDGLECVVMGKSACYSQCRPV 2237 ++MP MAPT E VCS G+RGIES CC C QCGG GCSTVG GA CC+S VL+ C EAPCV+ E P P A XXXXXXXX XXXXXXXXXXXXXX XX XXX XX I S GG E L S + + + +G Y L C K RS L S +M A++C++ CS +GAAYMA Q+G ECWCSR+G L+Y+RHG+ VCDY C+GDE+E CGG +F+L++L W PED EYVGCYAD K DRV+ ++ MT VCREHC+DK APYYGTQ+++ECWCGTSD+EADYERHGEG C M C GD VACGGYD+YSLFK+ +G +TPT AP TD P TST A S CSN VPGIE+ KGACCVAACGQCGG GCSTVALDLGLGS ECCEG +L AN PCGEAPCV P+GEC GDPV +EQCGG W GSTCCE+GLECVVMGKS CYSQCRP+ Sbjct: 598 SEMPVMAPTDEVVVCSTGIRGIESSDGAVCCPLGCTQCGGEGCSTVGLPE-YGAESCCQSDVLSAGVSCSVSEEAPCVLD------------ETPTPEPNAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDVCSNGIPGIQS----------------------------------------------GITCCLAECGECGGPGCAEFGGGLGQDNCCQGRIEEYGELCS---------VTLAAPCIVDGEGCLYFAGLACLPHLAKQPLHHVRSGLISSDMTAELCYETCSAKGAAYMATQWGVECWCSRDGSLDYDRHGDTGVCDYPCIGDESETCGGVHSFNLYRLSWAPAPEDEEYVGCYADSKGDRVLFDMISSDNMTAGVCREHCADKDAPYYGTQFSSECWCGTSDDEADYERHGEGVCHMACSGDGTVACGGYDAYSLFKHDNGGKTPTMAPVTDSPDTSTMAPVITREAPTTPRVTRSPVRSEEPTAAATSAPRSPGGSMPTTSTCSNGVPGIETSKGACCVAACGQCGGAGCSTVALDLGLGSDECCEGAVLDANRPCGEAPCVXXXXXXXXXXXXXXXXXX----XXXXXXXXXXAPTGECSGDPVEAWEQCGGDGWTGSTCCEEGLECVVMGKSTCYSQCRPI 1193
BLAST of mRNA_L-elsbetiae_contig653.15227.1 vs. uniprot
Match: A0A6H5JMV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMV6_9PHAE) HSP 1 Score: 385 bits (990), Expect = 8.780e-118 Identity = 295/655 (45.04%), Postives = 344/655 (52.52%), Query Frame = 3 Query: 1068 VPEGMPGT--YEHLGCFKDDKDDRVLKRSKLGSPEMIADVCFQYCSQRGAAYMALQFGYECWCSRNGLLEYERHGEGAVCDYACLGDENEICGGFDAFDLFKLWWPSEPEDPEYVGCYADDKEDRVMSHKVTI-PGMTTAVCREHCSDKGAPYYGTQYATECWCGTSDNEADYERHGEGSCFMGCDGDEGVACGGYDSYSLFKYGDGETPTTAPTTDMPTSTDXXXXXXXXXXXXXXXXXXXXXXXXXXASMCSNSVPGIESPKGACCVAACGQCGGIGCSTVALDLGLGSAECCEGTILLANEPCGEAPCVVGDDVPETEPPVSPTPTTTTPPATETLSPLVATPSGECEGDPVAVYEQCGGSTWKGSTCCEDGLECVVMGKSACYSQCRPVDDASPATPSPAGTTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPTRAPVXXXXXXXXXXXXXXXXXXXXDCMVVIIEAEDLALTGAWKVVDDSDASGGRYIVWEGLSEGSNNRDAKDGDIIRTTVRIATPGTYRFKWLMRQPSGVESDKGNDSWLDFPDADRFGPEGGSASYGTFVKVYGRALEGDFEYSGTAEGADHEHSQIAVEFDEAGEYVMEIAGRSHGHEIDQMILFGEGLGV-DDAAAGC 3020 +P MP Y ++GCF D KDDRV + K SP M VC +YC R A +MA QFG ECWCS + +EY+RH +G VCD C G+ +ICGGFDAFDL+K+ P+EP EYVGC+ADD+EDR++ ++ + P MT VCR +C ++ A +Y TQY ECWCG S++E DY+RHG GSC GC GD VACG ++K+ + P A T VPG G L G AE PV+PTP G V S TP P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXX DCMVVIIEAEDL + G W++V D+ ASGG YI WEGLSE NNRD DGDII T+V+I T GTY FKW MRQP GVESDK NDSWL+FPDADRFGP S SYGTFVKVYG A +G F+Y GTAE D H+QIA+EF AGEY MEI GRSHGH+IDQ++LFG +DA AGC Sbjct: 1 MPVSMPAEEGYSYVGCFADSKDDRVFEYMKT-SPTMTTAVCLEYCLDRRATFMATQFGIECWCSVDAEIEYDRHSDG-VCDCECGGEATDICGGFDAFDLYKITEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQTVCRTYCEERDAYFYATQYGDECWCGMSEDEQDYKRHGRGSCLAGCSGDPTVACGRDFQVVIYKH-ESFQPFLAVTL----------------------------------------VPG-------------------GFDAFNLFKFDGVAE-----------------------------PVAPTP-------------------GPXXXXXXXV---------------------------------------SALTPEPVAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------XXXXXTNDCMVVIIEAEDLPVNGDWRIVQDNAASGGAYITWEGLSEAQNNRDPGDGDIISTSVQIPTAGTYSFKWAMRQPDGVESDKANDSWLNFPDADRFGPADTSKSYGTFVKVYGNAADGVFKYQGTAEDEDGAHTQIAIEFAAAGEYEMEIGGRSHGHQIDQIVLFGGSFHTAEDAVAGC 487
BLAST of mRNA_L-elsbetiae_contig653.15227.1 vs. uniprot
Match: D8LED7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED7_ECTSI) HSP 1 Score: 399 bits (1024), Expect = 1.350e-117 Identity = 280/655 (42.75%), Postives = 334/655 (50.99%), Query Frame = 3 Query: 1065 DVPEGMPGT--YEHLGCFKDDKDDRVLKRSKLGSPEMIADVCFQYCSQRGAAYMALQFGYECWCSRNGLLEYERHGEGAVCDYACLGDENEICGGFDAFDLFKLWWPSEPEDPEYVGCYADDKEDRVMSHKVTI-PGMTTAVCREHCSDKGAPYYGTQYATECWCGTSDNEADYERHGEGSCFMGCDGDEGVACGGYDSYSLFKYGDGETPTTAPTTDMPTSTDXXXXXXXXXXXXXXXXXXXXXXXXXXASMCSNSVPGIESPKGACCVAACGQCGGIGCSTVALDLGLGSAECCEGTILLANEPCGEAPCVVGDDVPETEPPVSPTPTTTTPPATETLSPLVATPSGECEGDPVAVYEQCGGSTWKGSTCCEDGLECVVMGKSACYSQCRPVDDASPATPSPAGTTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPTRAPVXXXXXXXXXXXXXXXXXXXXDCMVVIIEAEDLALTGAWKVVDDSDASGGRYIVWEGLSEGSNNRDAKDGDIIRTTVRIATPGTYRFKWLMRQPSGVESDKGNDSWLDFPDADRFGPEGGSASYGTFVKVYGRALEGDFEYSGTAEGADHEHSQIAVEFDEAGEYVMEIAGRSHGHEIDQMILFGEGLGVDDAAAGC 3020 ++P MP Y ++GCF D K+DRV + K S M VC +YC R A YMA Q+GYECWCS + +EY+RH +G VCD+AC GD +ICGGFDAFDL+K+ P+EP EYVGC+ADD+EDR++ ++ + P MT AVCR +C ++ A +Y TQY ECWCG S++E DY+RHG GSC GC GD VACGG+D+++LFK+ G AE P+ TP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PT DCMVVIIEAEDL + G W++V D+ ASGG YI WEGLSE NN D DGDII T+V+I T GTY FKW MRQP GVESDK NDSWL+FPDADRFGP G S SYGTFVKVYG A +G F+Y GTAE + +H+QIA+EF AGEY MEI GRSHGH+IDQ++LFG+ L VDDA AGC Sbjct: 422 EMPVTMPVDEGYSYVGCFADSKEDRVFEYMKTSST-MTTAVCLEYCLDRRATYMATQYGYECWCSVDAEVEYDRHSDG-VCDHACGGDAADICGGFDAFDLYKITEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQAVCRTYCEERDAYFYATQYGDECWCGMSNDEEDYKRHGRGSCLAGCSGDPTVACGGFDAFNLFKFD------------------------------------------------------------------------------------GIAE-----------------------------------------------PIAPTPXXXXXXXXXXXXXX---------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVAPTPTN-----------------------DCMVVIIEAEDLPVNGDWRIVQDNAASGGAYITWEGLSEAQNNSDPADGDIISTSVQIPTAGTYSFKWAMRQPDGVESDKANDSWLNFPDADRFGPAGTSKSYGTFVKVYGNAADGVFKYQGTAEEENGDHTQIAIEFAAAGEYEMEIGGRSHGHQIDQIVLFGDSLKVDDAVAGC 905
BLAST of mRNA_L-elsbetiae_contig653.15227.1 vs. uniprot
Match: D7FU28_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU28_ECTSI) HSP 1 Score: 298 bits (764), Expect = 7.340e-83 Identity = 176/307 (57.33%), Postives = 204/307 (66.45%), Query Frame = 3 Query: 2106 CEGDPVAVYEQCGGSTWKGSTCCEDGLECVVMGKSACYSQCRPVDDASPATPSPAGTTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPTRAPVXXXXXXXXXXXXXXXXXXXXDCMVVIIEAEDLALTGAWKVVDDSDASGGRYIVWEGLSEGSNNRDAKDGDIIRTTVRIATPGTYRFKWLMRQPSGVESDKGNDSWLDFPDADRFGPEGGSASYGTFVKVYGRALEGDFEYSGTAEGADHEHSQIAVEFDEAGEYVMEIAGRSHGHEIDQMILFGEGLGVDDAAA--GC 3020 C G PV YEQCGG W GSTCC DG +C M + CY+QCRP P TPSP TT XXXXXXXXXXXXXXXXXXXXX +PT CMVV +EAEDL + G W+VV+D+DASGG+YI WEGLSEG NN D DGDI+ ++++ T GTY FKWLMRQP GVESDKGND+WL+FPDA R+GP G SYGTF+KVYGRA GDFEYSGT E + H H+QIAVEF+EAGEY MEI+GRSHG +IDQ+++FGE L VD+A A GC Sbjct: 499 CSGTPVEAYEQCGGKDWTGSTCCMDGYDCTQMVEDGCYAQCRPSVTVEPITPSPVSTTRPPVALSTSXXXXXXXXXXXXXXXXXXXXXVS------------EPTSG-----------------------CMVVRMEAEDLPVLGDWRVVNDADASGGKYITWEGLSEGQNNGDPADGDIMSASIQVPTAGTYSFKWLMRQPDGVESDKGNDAWLNFPDAKRYGPAGTQESYGTFIKVYGRATNGDFEYSGTGEDS-HGHTQIAVEFEEAGEYAMEISGRSHGLQIDQILVFGEDLSVDEAVANTGC 769
BLAST of mRNA_L-elsbetiae_contig653.15227.1 vs. uniprot
Match: D8LED9_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED9_ECTSI) HSP 1 Score: 226 bits (577), Expect = 1.470e-59 Identity = 105/206 (50.97%), Postives = 139/206 (67.48%), Query Frame = 3 Query: 1065 DVPEGMP--GTYEHLGCFKDDKDDRVLKRSKLGSPEMIADVCFQYCSQRGAAYMALQFGYECWCSRNGLLEYERHGEGAVCDYACLGDENEICGGFDAFDLFKLWWPSEPEDPEYVGCYADDKEDRVMSHKV-TIPGMTTAVCREHCSDKGAPYYGTQYATECWCGTSDNEADYERHGEGSCFMGCDGDEGVACGGYDSYSLFKYG 1673 ++P +P +Y ++GCF D+K DRV + + S M VC +YC +R A YMA Q+G ECWCS + EY+RH +G VCD+AC GDE + CGGFDAFDL+K+ P EP EYVGC+AD+ ED V+ ++ + P MT AVCR +C D A +Y TQ ECWCG S+ E DY R G GSC GC GD VACGG+++++LFK+G Sbjct: 389 EMPVTLPVEASYSYVGCFADNKHDRVFEYMRT-SFTMTTAVCLEYCLERRATYMATQYGIECWCSVDAETEYDRHSDG-VCDHACGGDEADYCGGFDAFDLYKITEPREPTGDEYVGCFADNPEDWVLGGEIKSQPDMTQAVCRTYCEDLDANFYATQNGEECWCGMSEEEEDYTRSGRGSCLAGCSGDPAVACGGFNAFNLFKFG 592
BLAST of mRNA_L-elsbetiae_contig653.15227.1 vs. uniprot
Match: D7FXK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXK6_ECTSI) HSP 1 Score: 221 bits (563), Expect = 7.210e-58 Identity = 103/208 (49.52%), Postives = 137/208 (65.87%), Query Frame = 3 Query: 1092 YEHLGCFKDDKDDRVLKRSKLGSPEMIADVCFQYCSQRGAAYMALQFGYECWCSRNGLLEYERH-----GEGAVCDYACLGDENEICGGFDAFDLFKLWWPSEPEDPEYVGCYADDKEDRVMSHKVTIP-GMTTAVCREHCSDKGAPYYGTQYATECWCGTSDNEADYERHGEGSCFMGCDGDEGVACGGYDSYSLFKYGDGETPTTA 1697 YEH+GCF D+K DRVL + SP M + +C ++C R A YMALQ+GYECWCSR L+Y RH G+ +CD +C G + E CGG AFDL+KL P + EYVGC+ADD+EDR +++K+ MT VCR +C G+ +Y TQY ECWCG +D+ +Y+RHG+G C GC GD +ACGGY ++SLF+Y D + TA Sbjct: 314 YEHIGCFADNKTDRVLGHL-MKSPLMTSAMCAEHCFGRRATYMALQYGYECWCSRYTELDYSRHSGTDKGDADLCDLSCYGCDAETCGGLYAFDLYKLDGPMPSDSREYVGCFADDQEDRALANKIKFQDNMTQDVCRVYCERFGSSFYATQYGDECWCGATDDVEEYKRHGDGECIAGCFGDPAIACGGYYAFSLFEYLDDDDDETA 520
BLAST of mRNA_L-elsbetiae_contig653.15227.1 vs. uniprot
Match: A0A6H5JN72_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JN72_9PHAE) HSP 1 Score: 199 bits (505), Expect = 1.220e-49 Identity = 96/218 (44.04%), Postives = 133/218 (61.01%), Query Frame = 3 Query: 1092 YEHLGCFKDDKDDRVLKRSKLGSPEMIADVCFQYCSQRGAAYMALQFGYECWCSRNGLLEYERHGEG---------AVCDYACLGDENEI----CGGFDAFD------------LFKLWWPSEPEDPEYVGCYADDKEDRVMSHKVTI-PGMTTAVCREHCSDKGAPYYGTQYATECWCGTSDNEADYERHGEGSCFMGCDGDEGVACGGYDSYSLFK 1667 Y H+GCF D+K+DRVL+ + + S M +C+++C R A YMA Q+G+ECWCS + L+Y RH + +C C GD+ I C +A + L+K+ P+EPE EYVGC+ADD +DR++ +++ P MT AVCR +C GA +Y TQY ECWCGTSD++ DY+RHG GSC C GD ACGG+DS++LFK Sbjct: 451 YTHVGCFSDNKEDRVLE-AMITSSAMTGAMCYEHCVDRRATYMATQYGFECWCSHDSDLDYARHSDDLERVDGRDYGLCGTRCEGDKVRILHGSCRQREALENHAMGEIRNLHYLYKITEPTEPEGEEYVGCFADDGDDRLLKNEIKYQPDMTQAVCRTYCEGFGAHFYATQYGDECWCGTSDDKEDYKRHGHGSCVAQCSGDPTTACGGFDSFNLFK 667
BLAST of mRNA_L-elsbetiae_contig653.15227.1 vs. uniprot
Match: D8LGP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP4_ECTSI) HSP 1 Score: 182 bits (463), Expect = 1.500e-45 Identity = 97/232 (41.81%), Postives = 126/232 (54.31%), Query Frame = 3 Query: 1044 GTGVDSEDVPEGMPGT----YEHLGCFKDDKDDRVLKRSKLGSPEMIADVCFQYCSQRGAAYMALQFGYECWCSRNGLLEYERHGEGAVCDYACLGDENEICGGFDAFDLFKLWWPSEPEDPEYVGCYADDKEDRVMSHKVTIPGMTTAVCREHCSDKGAPYYGTQYATECWCGTSDNEADYERHGEGSCFMGCDGDEGVACGGYDSYSLFKYG-DGETPTTAPTTDMPTST 1724 G V + G+ G+ YEH+GC+ D+ L M ++C+ C + G+ +M Q G EC CSR L Y G VCD C GD +E CGG DL+KL P+ EYVGC++D E RVM + GMTT +CR+HC A YY TQY EC+CG S + DYE HG G+C M C GD G ACGGY ++SL+++G DG P D+P ST Sbjct: 24 GAEVSAGGARRGLSGSSYEAYEHVGCYVDNGMVNARPHLPLVMETMTNEMCYDRCHELGSFFMGTQKGNECRCSREEDLAYSAFDFG-VCDIPCAGDSDETCGGQLTIDLYKLTAAQTPDHEEYVGCWSDANESRVMEDMLVDEGMTTDMCRDHCESSDAVYYATQYGNECFCGYSSDPEDYETHGLGTCHMHCGGDSGSACGGYWAFSLYQFGADG-----MPEPDVPEST 249
BLAST of mRNA_L-elsbetiae_contig653.15227.1 vs. uniprot
Match: D7FQI3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQI3_ECTSI) HSP 1 Score: 189 bits (481), Expect = 3.870e-45 Identity = 99/213 (46.48%), Postives = 131/213 (61.50%), Query Frame = 3 Query: 1053 VDSEDVPEGMPGTYEHLGCFKDDKDDRVLKRSKLGSPEMIADVCFQYCSQRGAA--YMALQFGYECWCSRNGLLEYERHGEGAVCDYACLGDENEICGGFDAFDLFKLWWPS--EPEDPEYVGCYADDKEDRVMSHKVTIPGMTTAVCREHCSDKGAPYYGTQYATECWCG---TSDNEAD-YERHGEGSCF-MGCDGDEGVACGGYDSYSLF 1664 ++SE +P G ++GCF DDK+DRVL SK+ S M +VC YC+ + Y A Q+G ECWC+R+ ++Y RHGEG+ CDY C GD CGG+DAFDLFKL S P + Y+GC+ADDK DRV+ K++ MT C EHC+ P++ Q+ ECWCG D++ D Y+RHG SC C GD CGGYDS+SL+ Sbjct: 168 LESEGLPVAPMGD-NYVGCFADDKEDRVLG-SKMSSGSMTPEVCAAYCADDSPSHTYYATQWGRECWCARD--VDYSRHGEGS-CDYTCTGDSGTTCGGYDAFDLFKLEEDSLSPPSEDYYLGCFADDKGDRVLEDKISASDMTLETCEEHCTALDKPFFALQWGKECWCGGCELQDDDLDRYDRHGIASCTDYPCTGDGSRQCGGYDSFSLY 375 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig653.15227.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig653.15227.1 >prot_L-elsbetiae_contig653.15227.1 ID=prot_L-elsbetiae_contig653.15227.1|Name=mRNA_L-elsbetiae_contig653.15227.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=950bp MPVDMPVDLPVDTPAPSDLSFSFSFDMEDDDDMFPTEPTSAPATDMPAMAback to top mRNA from alignment at L-elsbetiae_contig653:24672..33363- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig653.15227.1 ID=mRNA_L-elsbetiae_contig653.15227.1|Name=mRNA_L-elsbetiae_contig653.15227.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8692bp|location=Sequence derived from alignment at L-elsbetiae_contig653:24672..33363- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig653:24672..33363- >mRNA_L-elsbetiae_contig653.15227.1 ID=mRNA_L-elsbetiae_contig653.15227.1|Name=mRNA_L-elsbetiae_contig653.15227.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=5700bp|location=Sequence derived from alignment at L-elsbetiae_contig653:24672..33363- (Laminarionema elsbetiae ELsaHSoW15)back to top |