mRNA_L-elsbetiae_contig65.15182.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig65.15182.1 vs. uniprot
Match: D7FKL7_ECTSI (HU-CCDC81_euk_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKL7_ECTSI) HSP 1 Score: 463 bits (1192), Expect = 2.620e-154 Identity = 308/568 (54.23%), Postives = 345/568 (60.74%), Query Frame = 1 Query: 235 MRLRPVFILSEGFCRAHGLPHKRILRPPLFKKTAEVVNYSKLAIRYTTSMTKDMVYGALREVFRGIGEAIASGAEVSVSFSFGVLEAKERKFRFVFDCTALCGNETTTSRADXXXXXXXXXXXXGEIGAGEEWDRRSTSRSRSSSGPTCRRRPPSTAPSDCGNRRDDHGXXXXXXXXTIEFRNNQSPPDSPSLESPEADDRRQPTTSEEGAREPR--GRGLLGKEFDEEVERQRATEMAAEWGRIRGSGRRTKTREKVWEYAFRDHVTALEGQAEDDMTLATRRKNVQLAEDRRKAKEARDKQREMHDLLTFVQGQIHEIEDRRSTEVESKRKGDSQLTFSARRDKACNAAEGYRGTAWRAPDWGPRRARANNLSREELLGSLQRQIREREEERARGNRRRLAEEKDALDKLDREYNSKEERKKXXXXEAQQELKRSWERHGHLKRLRALAKAGPAAVRNYAVTQNIINQEGEINAPGGGSGGRAGWMEPGPRALTGPSKLYMKGLCRYRPCADDGGETCLSNGDGGRRGCGRADDRAGPECGKPRRPSTAHSEA-SSVGFDSRLSAR 1929 MRLRPVFIL+EGFCRAH LPHKRILRPPLF+K AE VNYSKLAIRYTT MTKDMVYGALREVFRGIG+A++SG +VSV FSFG LE KERKF+F FDC ALC N +TT+R D GE G EEWD ST RSRSSSG + RR P+ + N DD XXXX RN + PP +P E D QP T R G G+LGKEFDEEVERQRA E+AAE GR RGSG+R KTREKVWE AFRDHVTALEG AEDDM IEDRR+ EVESKR GD LTFSARRD+A E YRGTAWRAPDWGPRRARA+NL+R+ELLG LQ LDR+Y++KE RKK AQ ELKRSWE ++Q+II+Q+G+ +AP G + R GW E GPRA+TGPSKLYMKG+CRYRP D G NG+ R G G +DR E G RRPST SEA SSVGFDSRLSAR Sbjct: 1 MRLRPVFILNEGFCRAHDLPHKRILRPPLFRKAAEAVNYSKLAIRYTTFMTKDMVYGALREVFRGIGDAMSSGGQVSVVFSFGTLEVKERKFQFTFDCAALCRNGSTTTRTDTSSSCG------GERGEREEWDGLSTGRSRSSSGLSPRR--PAGSGLGARNCSDD----GHXXXXXXXXRNAEPPPGTPCTGISERDGWNQPPTXXXXXXXGRCPGEGVLGKEFDEEVERQRAQEVAAERGRKRGSGKRCKTREKVWESAFRDHVTALEGLAEDDM-----------------------------------------IEDRRALEVESKRNGDKPLTFSARRDRASTVNEKYRGTAWRAPDWGPRRARASNLTRDELLGCLQ---------------------------LDRDYDAKEARKKAEREVAQMELKRSWE-----------------------LSQSIIDQDGKNDAPEGRA--RTGWTEAGPRAITGPSKLYMKGVCRYRPWVDAGERGRRVNGNDSRGG-GGGNDRPEAEDGDCRRPSTTLSEAPSSVGFDSRLSAR 462
BLAST of mRNA_L-elsbetiae_contig65.15182.1 vs. uniprot
Match: F0YCP0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCP0_AURAN) HSP 1 Score: 110 bits (275), Expect = 1.640e-21 Identity = 65/155 (41.94%), Postives = 87/155 (56.13%), Query Frame = 1 Query: 115 RKAWGILNKWALETLAERGTVDVPNFLRVGWQ---RFRSLDGEMRL-----------RPVFILSEGFCRAHGLPHKRILRPPLFKKTAEVVNYSKLAIRYTTSMTKDMVYGALREVFRGIGEAIASGAEVSVSFSFGVLEAKERKFRFVFDCTAL 537 R+AW LN W L+ + +R VPNF + WQ F D + RL RPVF+ +E FCR+HGLP +R L K ++YS LA+RY++ +TKDMV+ ALR+V R +GE IASG + V S G L + K RF FD +L Sbjct: 32 REAWDALNAWILDRVIQRRGAAVPNFGKFTWQVLGGFTPADLDPRLAGKKAASKIPLRPVFMFAENFCRSHGLPWRRQNEADLVK--CGDLDYSNLALRYSSHLTKDMVFAALRDVTRRVGEKIASGFALRVKMSVGSLVCEHGKCRFEFDAASL 184
BLAST of mRNA_L-elsbetiae_contig65.15182.1 vs. uniprot
Match: A0A8J2SU03_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SU03_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 1.020e-16 Identity = 58/150 (38.67%), Postives = 83/150 (55.33%), Query Frame = 1 Query: 115 RKAWGILNKWALETLAERGTVDVPNFLRVGWQ---RFRSLDGEMR------LRPVFILSEGFCRAHGLPHKRILRPPLFKKTAEVVNYSKLAIRYTTSMTKDMVYGALREVFRGIGEAIASGAEVSVSFSFGVLEAKERKFRFVFDCTAL 537 R++W L W L + +P F R WQ ++ D + R LRPVF SE FC+AH LP + I L + +NYS LA+R+T+ +TKDMV+ ALR++ R IG+ IASG +++ F G L + K RF+FD + L Sbjct: 43 RESWEALRVWLRAKLLAKRGASIPGFGRFTWQVLGDYKPSDLQDRPDELIPLRPVFQFSEDFCKAHLLPWRPIAEDKLVE--CADLNYSILALRHTSRLTKDMVWSALRDLQRKIGDRIASGYSLTLDFGVGQLVSDRGKPRFLFDASKL 190
BLAST of mRNA_L-elsbetiae_contig65.15182.1 vs. uniprot
Match: A0A8K1FKM3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKM3_PYTOL) HSP 1 Score: 94.7 bits (234), Expect = 1.030e-16 Identity = 44/134 (32.84%), Postives = 78/134 (58.21%), Query Frame = 1 Query: 124 WGILNKWALETLAERGTVDVPNFLRVGWQRFRSLDGEMRLRPVFILSEGFCRAHGLPHKRILRPPLFKKTAEVVNYSKLAIRYTTSMTKDMVYGALREVFRGIGEAIASGAEVSVSFSFGVLEAKERKFRFVFD 525 W LN W V + F + W+ + + +LRP+F+LS+ F +++GL K+ L PP + E +N++K+AI+++ ++TKD+V+ +R++ + IGE +G +S++F+ G L AK R VFD Sbjct: 35 WRALNDWIDSRFEVGKGVHIATFATISWETCTNSRNQPKLRPLFLLSDTFIKSYGLQQKKPLTPPCLA-SLEDINFTKIAIKFSKNLTKDLVFSGIRDLLQKIGEVAGAGTPMSITFNIGRLIAKNRCISLVFD 167
BLAST of mRNA_L-elsbetiae_contig65.15182.1 vs. uniprot
Match: A0A7S3MHC2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MHC2_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 1.150e-16 Identity = 56/151 (37.09%), Postives = 89/151 (58.94%), Query Frame = 1 Query: 91 LGRLHSLPRKAWGILNKWALETLAERGTVDVPNFLRVGWQRFRSLDGEM-RLRPVFILSEGFCRAHGLPHKRILRPPLFKKTA-EVVNYSKLAIRYTTSMTKDMVYGALREVFRGIGEAIASGAEVSVSFSFGVLEAKERKFRFVFDCTAL 537 +G + + +W LN W LA++ V F W+ + GE+ + RP+FI+S+ F + + + +RI R P + TA E VNYS LAI+++ S+TKDMV+ LR+ + IGE I G E+ + F+FG L AK+R+ +F F+ + L Sbjct: 30 MGAKSEIYQGSWTALNAWIETKLAKQKGAGVSGFGCFCWELKKK--GEVTQARPIFIISDTFVKTYRVKRERIHRLP--ETTAIEEVNYSLLAIKFSNSLTKDMVFSGLRDTMKKIGEFIDRGYEIEIPFTFGTLTAKDRRVKFEFNQSRL 176
BLAST of mRNA_L-elsbetiae_contig65.15182.1 vs. uniprot
Match: H3GLA0_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GLA0_PHYRM) HSP 1 Score: 92.8 bits (229), Expect = 4.310e-16 Identity = 45/147 (30.61%), Postives = 79/147 (53.74%), Query Frame = 1 Query: 85 CQLGRLHSLPRKAWGILNKWALETLAERGTVDVPNFLRVGWQRFRSLDGEMRLRPVFILSEGFCRAHGLPHKRILRPPLFKKTAEVVNYSKLAIRYTTSMTKDMVYGALREVFRGIGEAIASGAEVSVSFSFGVLEAKERKFRFVFD 525 C R W N W ++ V + F + W+ F + + +LRP F LS+ F + +G+ KR P + E +N++K+AIR++ ++TKD+V+ A+R++ + IG ++G +S++F+FG L AK R +FD Sbjct: 22 CASERKRETLEDVWRAFNDWIESRFSQGKGVHIATFATITWETFTNARNQPKLRPTFFLSDTFIKTYGVSQKRPPLPNANLASLEDINFTKIAIRFSHNLTKDLVFCAIRDMVQQIGMVASTGVPMSIAFNFGRLIAKNRCVSVLFD 168
BLAST of mRNA_L-elsbetiae_contig65.15182.1 vs. uniprot
Match: G4YXB9_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4YXB9_PHYSP) HSP 1 Score: 92.4 bits (228), Expect = 6.180e-16 Identity = 44/147 (29.93%), Postives = 79/147 (53.74%), Query Frame = 1 Query: 85 CQLGRLHSLPRKAWGILNKWALETLAERGTVDVPNFLRVGWQRFRSLDGEMRLRPVFILSEGFCRAHGLPHKRILRPPLFKKTAEVVNYSKLAIRYTTSMTKDMVYGALREVFRGIGEAIASGAEVSVSFSFGVLEAKERKFRFVFD 525 C R W N W + V + F + W+ F + + +LRP+F LS+ F + +GL +R P + E +N++K+AI+++ ++TKD+V+ A+R++ + IG ++G +S++F+FG L AK R +FD Sbjct: 22 CAADRKRETLEDVWRAFNDWIESRFNQGKGVHIATFATITWETFTNSRNQPKLRPIFFLSDTFIKTYGLSQRRPPLPSANLASLEDINFTKIAIKFSHNLTKDLVFCAIRDMVQKIGMVASTGVPMSIAFNFGRLIAKNRCVSVLFD 168
BLAST of mRNA_L-elsbetiae_contig65.15182.1 vs. uniprot
Match: A0A5D6XS35_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XS35_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 7.000e-16 Identity = 44/134 (32.84%), Postives = 76/134 (56.72%), Query Frame = 1 Query: 124 WGILNKWALETLAERGTVDVPNFLRVGWQRFRSLDGEMRLRPVFILSEGFCRAHGLPHKRILRPPLFKKTAEVVNYSKLAIRYTTSMTKDMVYGALREVFRGIGEAIASGAEVSVSFSFGVLEAKERKFRFVFD 525 W N W V + F + W+ + + +LRPVF+LS+ F R +GL H++ P E+ N++K+AI+++ ++TKD+V+ +R++ + +GE +GA++S++FS G L AK R VFD Sbjct: 163 WRAFNDWISSRFDVGKGVHIATFASISWETCTNSRNQPKLRPVFVLSDTFARTYGLQHRKPPSPGGLGALEEI-NFTKIAIKFSRTLTKDLVFSGVRDLLQRLGELAGAGAQLSIAFSVGRLVAKNRVVSMVFD 295
BLAST of mRNA_L-elsbetiae_contig65.15182.1 vs. uniprot
Match: A0A7S1WT69_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WT69_ALECA) HSP 1 Score: 92.0 bits (227), Expect = 8.520e-16 Identity = 47/134 (35.07%), Postives = 76/134 (56.72%), Query Frame = 1 Query: 124 WGILNKWALETLAERGTVDVPNFLRVGWQRFRSLDGEMRLRPVFILSEGFCRAHGLPHKRILRPPLFKKTA-EVVNYSKLAIRYTTSMTKDMVYGALREVFRGIGEAIASGAEVSVSFSFGVLEAKERKFRFVF 522 W + + + +R T+ V NF ++GW+ + G +LRP F +++ F RAH L + + P TA E N+SK AIRY+ S+TKD ++ +R + + +GE +ASG ++S+ G L +R RFVF Sbjct: 29 WDAFSHYLTAVMQQRQTLSVMNFCKIGWRVEELVQGRAKLRPHFQVADSFARAHHLDLRAQVGIPDKHFTAIEEFNFSKAAIRYSQSLTKDNIFMGMRAIVQHLGEVVASGQQMSIDLEVGKLVCSDRDVRFVF 162
BLAST of mRNA_L-elsbetiae_contig65.15182.1 vs. uniprot
Match: A0A1W0A7S2_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A7S2_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 2.020e-15 Identity = 41/148 (27.70%), Postives = 82/148 (55.41%), Query Frame = 1 Query: 82 SCQLGRLHSLPRKAWGILNKWALETLAERGTVDVPNFLRVGWQRFRSLDGEMRLRPVFILSEGFCRAHGLPHKRILRPPLFKKTAEVVNYSKLAIRYTTSMTKDMVYGALREVFRGIGEAIASGAEVSVSFSFGVLEAKERKFRFVFD 525 SC + + + W LN W + V V F ++ W+ ++RP+F+L++ + + +GL +K+ + P+ E +N++KLAI+Y+ ++TKD+V+ +R++ IGE ++GA++S+ + G + AK + +FD Sbjct: 19 SCAADKKKEILEEVWMALNAWIEARYNDGKGVHVAPFCKISWETITVGRNTRKIRPIFLLNDTYGKTYGLHYKKRVTVPIVA-AIEDINFTKLAIKYSKNLTKDIVFSGVRDLLHKIGEIASTGAQMSIELTIGKIVAKNKAIHMIFD 165 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig65.15182.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig65.15182.1 >prot_L-elsbetiae_contig65.15182.1 ID=prot_L-elsbetiae_contig65.15182.1|Name=mRNA_L-elsbetiae_contig65.15182.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=647bp MACSNGKVTIETILDNARCDKIRPAVASCQLGRLHSLPRKAWGILNKWALback to top mRNA from alignment at L-elsbetiae_contig65:9308..18326- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig65.15182.1 ID=mRNA_L-elsbetiae_contig65.15182.1|Name=mRNA_L-elsbetiae_contig65.15182.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9019bp|location=Sequence derived from alignment at L-elsbetiae_contig65:9308..18326- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig65:9308..18326- >mRNA_L-elsbetiae_contig65.15182.1 ID=mRNA_L-elsbetiae_contig65.15182.1|Name=mRNA_L-elsbetiae_contig65.15182.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3882bp|location=Sequence derived from alignment at L-elsbetiae_contig65:9308..18326- (Laminarionema elsbetiae ELsaHSoW15)back to top |