mRNA_L-elsbetiae_contig6493.15173.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6493.15173.1
Unique NamemRNA_L-elsbetiae_contig6493.15173.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig6493.15173.1 vs. uniprot
Match: A0A6H5JCZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCZ4_9PHAE)

HSP 1 Score: 328 bits (841), Expect = 7.460e-104
Identity = 205/348 (58.91%), Postives = 236/348 (67.82%), Query Frame = 1 
Query:   28 SNEYHLSRIIMVHQKSEGVSLLAPLKQLEASWGYEQVAYPYACYNDETKKFKADVYKTLEELVPLQVNVQAVASRQEFFQEENYAVLAHVREKLGDFSRQMRSSRGVRARNVDLEDLERAAQQGSRRKPGALFPAAGS----GASNDGNKALRKAVRWAAGALDKIQEIIEPAATRRNSVSLRAWAMCAALLERAILQAQMSADPDRPLTPAEWGALEDEKPPPEPVSEDK--LIALRARERALAHL-EDVEERAKMEDDGGPRKRKGVDRGRGREEERMRWGEKTDTTKSVMHWAGADARKNLSPDDDDDDPFGLDVPPWRGRITPIDLPEEGFEGQEGGVQGGQKR 1050
            SNEYHLSRII VHQ SE VSLLAPLK LEASWGYEQV YPYAC ND+ K+F+ADVYKTLE+LVPLQVNVQAVA+R+EFFQEENY  L HVRE+L +F R+M SSR  RA+  +L D+ + A +G R         + +        +  K LRKA+ WAAGAL KIQEIIEPAATRRNSVSLR WAMCAALLERAILQ QMSADPDRPLTPAEWG LEDEKPP  PV  D+  LI  RAR+   A L ED +   + E        K  +    RE  RMR  E+    +  M WAG D RK+LS  DDDDD    D P W GR+ P   PEE  E +EGG +  ++R
Sbjct:   78 SNEYHLSRIITVHQISETVSLLAPLKLLEASWGYEQVPYPYACSNDDAKEFQADVYKTLEDLVPLQVNVQAVANREEFFQEENYTSLVHVRERLKEFIRKMNSSRRPRAKAANLADVRKGADRGRRGXXXXXXXKSDTLRERNECANNEKTLRKALVWAAGALAKIQEIIEPAATRRNSVSLRGWAMCAALLERAILQVQMSADPDRPLTPAEWGRLEDEKPPTPPVEVDEKDLIGRRARDNVRAFLREDADREPRREAYSYEAALKEEEXXXARE--RMRR-ERQGGAEEGMRWAGEDTRKDLSLQDDDDD----DSPMWSGRLNPKANPEERLE-EEGGREAEEER 417
[Close]
BLAST of mRNA_L-elsbetiae_contig6493.15173.1 vs. uniprot
Match: D7FW21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW21_ECTSI)

HSP 1 Score: 298 bits (762), Expect = 1.220e-89
Identity = 195/343 (56.85%), Postives = 213/343 (62.10%), Query Frame = 1 
Query:   28 SNEYHLSRIIMVHQKSEGVSLLAPLKQLEASWGYEQVAYPYACYNDETKKFKADVYKTLEELVPLQVNVQAVASRQEFFQEENYAVLAHVREKLGDFSRQMRSSRGVRARNVDLEDLERAAQQGSRRKPGALFPAAGSGASNDGNKALRKAVRWAAGALDKIQEIIEPAATRRNSVSLRAWAMCAALLERAILQAQMSADPDRPLTPAEWGALEDEKPPPEP--VSEDKLIALRARERALAHL-EDVE----------ERAKMEDDGGPRKRKGVDRGRGREEERMRWGEKTDTTKSVMHWAGADARKNLS-PDDDDDDPFGLDVPPWRGRITPIDLPEEGFE 1014
            SNEYHLSRII VHQ SE VSLLAPLK LEASWGYEQV YPYAC ND+ K+F+A+VYKTLE+LVPLQVNVQAVA+R+EFFQEENYA L HVRE+L +F R+M  SR         E  ERA                      D +KALR+A+ WAAGAL KIQEIIEPAA RRNSVSLR WAMCAALLERAILQAQMSADPDRPLTPAEWG LEDEKPP  P  V E+ LI  RARE   A L ED +          E A  E              +G  EE MRW             AG D RK+LS  D+          PPW GRI P   PEE  E
Sbjct:  499 SNEYHLSRIITVHQISETVSLLAPLKLLEASWGYEQVPYPYACSNDDAKEFQANVYKTLEDLVPLQVNVQAVANREEFFQEENYASLVHVRERLKEFIRRMNPSR---------ERNERA----------------------DNDKALREALVWAAGALAKIQEIIEPAAARRNSVSLRGWAMCAALLERAILQAQMSADPDRPLTPAEWGRLEDEKPPTPPLEVDEEDLIGRRARENVRAFLREDADQEPRREAYSYEAALKEXXXXXXXXXXXXXRQGGPEEGMRW-------------AGGDTRKDLSLQDNXXXXXXXXXXPPWSGRINPNANPEERLE 797
[Close]
BLAST of mRNA_L-elsbetiae_contig6493.15173.1 vs. uniprot
Match: A0A7S4VBZ0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VBZ0_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 6.570e-14
Identity = 58/199 (29.15%), Postives = 96/199 (48.24%), Query Frame = 1 
Query:  109 LEASWGYEQVAYPYACYNDETKKFKADVYKTLEELVPLQVNVQAVASRQEFFQEENYAVLAHVR-------EKLGDFSRQMRSSRGVRARNVDLEDLERAAQQGSRRKPGALFPAAGSGASNDGNKALRKAVRWAAGALDKIQEIIEPAATRRNSVSLRAWAMCAALLERAILQAQMSADPDRPLTPAEWGALEDEKPP 684
            +E SW ++   YPY    DE   F    +   EEL PL VN++ V  ++EFFQ +NY +LA +R       E+L    R +R+S    + +++ + +E      + R                 ++++   +  A  +L +  ++++PA    NSVS   W      LE ++ + +   DPDRPL+P EWG L +E PP
Sbjct:  362 VETSWSFQYATYPYVYARDEAVSFLGKCFLLGEELYPLLVNMKGVVEKKEFFQRDNYLMLASIRRSFVGHIEELHKPRRTLRNSLRKFSYHMNKQQIESYGVDNNIRD----------------DRSVDIVLESALLSLGRCVDLVKPAGLLVNSVSKADWERALHALEHSMREIREVCDPDRPLSPTEWGKLVEEDPP 544
[Close]
BLAST of mRNA_L-elsbetiae_contig6493.15173.1 vs. uniprot
Match: A0A6V2HMV2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2HMV2_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 6.840e-14
Identity = 58/199 (29.15%), Postives = 96/199 (48.24%), Query Frame = 1 
Query:  109 LEASWGYEQVAYPYACYNDETKKFKADVYKTLEELVPLQVNVQAVASRQEFFQEENYAVLAHVR-------EKLGDFSRQMRSSRGVRARNVDLEDLERAAQQGSRRKPGALFPAAGSGASNDGNKALRKAVRWAAGALDKIQEIIEPAATRRNSVSLRAWAMCAALLERAILQAQMSADPDRPLTPAEWGALEDEKPP 684
            +E SW ++   YPY    DE   F    +   EEL PL VN++ V  ++EFFQ +NY +LA +R       E+L    R +R+S    + +++ + +E      + R                 ++++   +  A  +L +  ++++PA    NSVS   W      LE ++ + +   DPDRPL+P EWG L +E PP
Sbjct:  398 VETSWSFQYATYPYVYARDEAVSFLGKCFLLGEELYPLLVNMKGVVEKKEFFQRDNYLMLASIRRSFVGHIEELHKPRRTLRNSLRKFSYHMNKQQIESYGVDNNIRD----------------DRSVDIVLESALLSLGRCVDLVKPAGLLVNSVSKADWERALHALEHSMREIREVCDPDRPLSPTEWGKLVEEDPP 580
[Close]
BLAST of mRNA_L-elsbetiae_contig6493.15173.1 vs. uniprot
Match: A0A7S4M5J4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4M5J4_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 5.230e-12
Identity = 53/190 (27.89%), Postives = 85/190 (44.74%), Query Frame = 1 
Query:  109 LEASWGYEQVAYPYACYNDETKKFKADVYKTLEELVPLQVNVQAVASRQEFFQEENYAVLAHVREKLGDFSRQMRSSRGVRARNVDLEDLERAAQQGSRRKPGALFPAAGSGASNDGNKALRKAVRWAAGALDKIQEIIEPAATRRNSVSLRAWAMCAALLERAILQAQMSADPDRPLTPAEWGALEDEK 678
            +E SW ++   YP+    DE   F    +   EEL PL  N++ V  ++EFFQ +NY +LA +R  L     ++ S R           L+ A ++ S                  G + +   +  A  +L +  +++ PA    +SVS   W      L  ++ + + S DPDRPL P EWG L D++
Sbjct:  346 VETSWSFQYATYPFLYAKDEAVVFLGKCFLLGEELTPLLANMKGVVDQKEFFQRDNYLMLASIRRSLVSHVERLHSKR---------TSLKTALREYS-----------------SGRRDVTAVLEGALLSLGRCVDVVRPAGLLVSSVSKSEWTRALGQLRHSMEEIRRSCDPDRPLRPTEWGKLVDDE 509
[Close]
BLAST of mRNA_L-elsbetiae_contig6493.15173.1 vs. uniprot
Match: A0A7S0FU45_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FU45_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 4.610e-11
Identity = 54/187 (28.88%), Postives = 82/187 (43.85%), Query Frame = 1 
Query:  127 YEQVAYPYACYNDETKKFKADVYKTLEELVPLQVNVQAVASRQEFFQEENYAVLAHVREKLGDFSRQMRSSRGVRARNVDLEDLERAAQQGSRRKPGALFPAAGSGASNDGNKALRKAVRWAAGAL---DKIQEIIEPAATRRNSVSLRAWAMCAALLERAILQAQMSADPDRPLTPAEWGALEDEK 678
            ++   YP     DE   F    +   EEL+PL VN++ V   +EFFQ +NY +LA +R  L     ++  S G++      +D             G L P+     S     A R  +    GAL    +  +++ PA    + V  + W      LE ++ + +   DPDRPL P EWG L DE+
Sbjct:    1 FQYATYPILYAQDEALVFLGKCFLLAEELMPLLVNMKGVVEEEEFFQRDNYLMLASIRRSLVSKVERLHKSSGIKRALKRYQDTV----------TGRLPPS-----STKATAAARDIIVILEGALLSLGRCVDLVRPAGLLVSVVPSKNWRRALRALEHSLREIRSICDPDRPLRPTEWGKLVDEE 172
[Close]
BLAST of mRNA_L-elsbetiae_contig6493.15173.1 vs. uniprot
Match: A0A7S3V5C3_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V5C3_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 8.080e-10
Identity = 52/189 (27.51%), Postives = 86/189 (45.50%), Query Frame = 1 
Query:  109 LEASWGYEQVAYPYACYNDETKKFKADVYKTLEELVPLQVNVQAVASRQEFFQEENYAVLAHVREKLGDFSRQMRSSRGVRARNVDLEDLERAAQQGSRRKPGALFPAAGSGASNDGNKALRKAVRWAAGAL---DKIQEIIEPAATRRNSVSLRAWAMCAALLERAILQAQMSADPDRPLTPAEWGAL 666
            ++ SW ++   YPY     ++  F    +   EEL+PL VN++ V  ++EFFQ +NY +LA +R  L +          + A +      ++A +   RR               D +   R  +R   GAL    +  ++++PA     SV+   W      LE ++ + +   DPDRPL P+EWG L
Sbjct:  526 VKTSWSFQYATYPYIYAKSDSTVFLGKCFLLGEELMPLLVNMKGVVEQREFFQRDNYLMLASIRRSLVEH---------IEALHKPSHSTKKAMKNELRR-------------IKDVHGNERDVIRILEGALLSLGRCCDMVKPAGLHVGSVTKDDWKRALRSLEHSMSEIRTYCDPDRPLLPSEWGKL 692
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6493.15173.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JCZ4_9PHAE7.460e-10458.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FW21_ECTSI1.220e-8956.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S4VBZ0_9STRA6.570e-1429.15Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A6V2HMV2_9STRA6.840e-1429.15Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4M5J4_9STRA5.230e-1227.89Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S0FU45_9STRA4.610e-1128.88Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S3V5C3_9STRA8.080e-1027.51Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6493contigL-elsbetiae_contig6493:5969..10284 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score304.3
Seed ortholog evalue7.5e-80
Seed eggNOG ortholog2880.D7FW21
Hectar predicted targeting categoryother localisation
EggNOG OGs2CY8W@1,2S2UA@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size1065
Cds size1065
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6493.15173.1prot_L-elsbetiae_contig6493.15173.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6493 5969..10284 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816716.459929-CDS-L-elsbetiae_contig6493:5968..64151622816716.459929-CDS-L-elsbetiae_contig6493:5968..6415Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6493 5969..6415 -
1691683761.3626418-CDS-L-elsbetiae_contig6493:5968..64151691683761.3626418-CDS-L-elsbetiae_contig6493:5968..6415Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6493 5969..6415 -
1622816716.470767-CDS-L-elsbetiae_contig6493:6638..67401622816716.470767-CDS-L-elsbetiae_contig6493:6638..6740Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6493 6639..6740 -
1691683761.3850176-CDS-L-elsbetiae_contig6493:6638..67401691683761.3850176-CDS-L-elsbetiae_contig6493:6638..6740Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6493 6639..6740 -
1622816716.4832175-CDS-L-elsbetiae_contig6493:6968..71431622816716.4832175-CDS-L-elsbetiae_contig6493:6968..7143Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6493 6969..7143 -
1691683761.4035912-CDS-L-elsbetiae_contig6493:6968..71431691683761.4035912-CDS-L-elsbetiae_contig6493:6968..7143Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6493 6969..7143 -
1622816716.496436-CDS-L-elsbetiae_contig6493:7940..80261622816716.496436-CDS-L-elsbetiae_contig6493:7940..8026Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6493 7941..8026 -
1691683761.413252-CDS-L-elsbetiae_contig6493:7940..80261691683761.413252-CDS-L-elsbetiae_contig6493:7940..8026Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6493 7941..8026 -
1622816716.5071876-CDS-L-elsbetiae_contig6493:8747..88191622816716.5071876-CDS-L-elsbetiae_contig6493:8747..8819Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6493 8748..8819 -
1691683761.4225807-CDS-L-elsbetiae_contig6493:8747..88191691683761.4225807-CDS-L-elsbetiae_contig6493:8747..8819Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6493 8748..8819 -
1622816716.5206459-CDS-L-elsbetiae_contig6493:10101..102841622816716.5206459-CDS-L-elsbetiae_contig6493:10101..10284Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6493 10102..10284 -
1691683761.4319854-CDS-L-elsbetiae_contig6493:10101..102841691683761.4319854-CDS-L-elsbetiae_contig6493:10101..10284Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6493 10102..10284 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6493.15173.1

>prot_L-elsbetiae_contig6493.15173.1 ID=prot_L-elsbetiae_contig6493.15173.1|Name=mRNA_L-elsbetiae_contig6493.15173.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=355bp
MVHDTRCGGSNEYHLSRIIMVHQKSEGVSLLAPLKQLEASWGYEQVAYPY
ACYNDETKKFKADVYKTLEELVPLQVNVQAVASRQEFFQEENYAVLAHVR
EKLGDFSRQMRSSRGVRARNVDLEDLERAAQQGSRRKPGALFPAAGSGAS
NDGNKALRKAVRWAAGALDKIQEIIEPAATRRNSVSLRAWAMCAALLERA
ILQAQMSADPDRPLTPAEWGALEDEKPPPEPVSEDKLIALRARERALAHL
EDVEERAKMEDDGGPRKRKGVDRGRGREEERMRWGEKTDTTKSVMHWAGA
DARKNLSPDDDDDDPFGLDVPPWRGRITPIDLPEEGFEGQEGGVQGGQKR
EEEEE
back to top

mRNA from alignment at L-elsbetiae_contig6493:5969..10284-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6493.15173.1 ID=mRNA_L-elsbetiae_contig6493.15173.1|Name=mRNA_L-elsbetiae_contig6493.15173.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4316bp|location=Sequence derived from alignment at L-elsbetiae_contig6493:5969..10284- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTACACGATACACGGTGTGGTGGCAGCAATGAGTACCACCTGTCTCG
GATCATCATGGTGCACCAGAAAAGCGAAGGCGTTAGCCTGCTGGCCCCGC
TCAAGCAGCTCGAGGCCTCGTGGGGGTACGAGCAAGTGGCGTACCCGTAC
GCCTGCTACAACGACGAGACCAAGAAATTCAAGGTAAGAAAGGACAAGAT
ACACAAGATGATTAACTGACTGTTTTTCTTTTCTTTGTTTTCTTCCCATT
ATTAGCTTATTCCTCGTCTGCCCCACTGGCCCCCTTCCTCCACTACGACT
GGCTAGACGTACTACTGTGTGGCTGCGTCGCAGCCAGCTCCGTGGTAGTC
TGTTTTTCATTCGGCCGGACTGACACACTTTTTGTAGCATTGATGCCTCG
ACTTTTTACCACCCAGTGAGGCGAATAAGTCGTCTGGCCCCAACCAATTT
TGCTCGAAATGGAAGAACGGAGATATATGCGTGATGAACTGGTACTACAA
CATTTTGCTTGAGAAACTATTTCCGCCGGGGCGAGACCAAATTACGATTC
TCGCCGAGTGCTCGCGTGCTGGCTGGTGTGCTGTTTGCCAGAGGCGAGTT
CCTGCTGAAATCGTCTGCGTTGTGGTACCAGTTGCTCGGACTACTACAGC
AGTATTGCATTTTTTTGTATTTTTGACGCTTTGAAGAACACATTCAGTGA
TTGATTATCTTACAATCACCGGAGGAGCGGCGGTTTCTTAAAAGTCTGCC
ATGCGCCTTAATGCGATATTTGCTTTTGCGACATAGGATACCACCACTAC
ATACCGTCGTCTCGAAAGATGTCTTCAAAACGTCGGGCGGGAGTTTAGGT
TTCATCAAAAGTCGAGCACACTATCCTCTCTCTTTGTAGTTGATTTCGCC
ACGCAGCACATACTAGGTACCTGCTTCAGTTCCTCCGCGTGTTTCTTTCG
GGTGTTTTGACGGCTCCAGCACTTTTTTTAAAATAAACAATGAATCAAAA
ATGGAACCTAACCCACACTAGGGCAAGGACTCGATATGGGGTTCAAACGG
TATTCCATTCGGTGACGTAATATTTGGCGAAGCGAGCAGAAAAACAAACC
TAAAATGTCGGAAGAGTTCAACATCTCCCCTGCAAAGATTTGCGAGGTCG
GCCAACAAGTATTCCGGCGGGTAGATGCCCGCCATGATGCCGCAATGTTG
CCATCTACTTCAAAATAGGAACACATCGCATTGTTGAACTAAATCAAAAT
GCTGGTTTAATATATGTGGGTTACTGCTTTGAGGAGAACATGCACTCTTT
TGACCACGGGTCGTGAGTTGCTAGACCTTTTGGGACTACTACTGTTGTAG
CAATCTCGATTATACGAACTCATGCGAAGACCAACAAAACAGAACAACAT
ACGAAGTGCATAGTCTTGCTGCTGAATTTGTGTTTTCGACGATCTCGTTC
GTGTCGGGCAACAAGGCCGACGTCTACAAGACTTTAGAGGAGCTGGTGCC
CCTCCAGGTGAACGTGCAAGCGGTGGCCAGCCGACAGGTGAGGCAGGCGT
GTTCTCCGCAGGGTGGGGGAGGTAGATTTTAACATGCTTGCGGCAGCGGA
ATCTTACGCAGATGTCGAGGAAAGCAAGCAGGCAGAGATGCAGATAGCGG
TTGGGGGGGGCGCTCGAAGGCGCTCGGTTTGAAACGCTCCCCGTCAGTTG
ATGCGGTCTGGTGCATTAATTGACCGTCGAAGAAAGGCGGGGTGTGCGTG
GTGGGGGGTTATGTGTCAACCCGTTTCCGAGGCAGCCGGCAGGCTTTCGA
AATAATCATCCCGCCCCGCCGCTTTATGTTCCTGGCTGAATGAATTGTCC
CCGTTTGTCTTTTTTTAGTTTTTTCTCGGCCCGCCATATACGTTTGCACG
TGGGCTTCTGCTGTCTACCACCACCATCATCGGGGTAATTTTCGAGATGA
GCGTTTATTTAGCCGAAATACCGCCTCACCCAGCCGCTGTGTATCGTCGT
TGCGCAGGCTCGCTGGAGATACAAATGTCCGGTCGGGGTGTGTTTCGCAC
TCTCTTTGCGTATGTTTCCCTTCCCTAAACTTCTGAAAGGTATTTTGCCT
ACCCCCCCCTCACGTTTGCTAGAAGAGTTTGGGCCTTGTTTTTCTCCGAG
CTTGTTGTTTCCCCCATCTCCTCTCTGTTTTCTCGATAAATTATGCCTGC
TGCTGCTGCTGCTGCTGCTGCTGCCGCCGCCGGTGCTGCTGCTGCGCGCT
GCCCACAGGAGTTCTTCCAAGAAGAGAACTACGCGGTGCTTGCCCACGTG
CGCGAAAAGCTGGGCGACTTCAGCCGACAGATGCGGTCTTCGAGGTGAAT
AAACCACGAGCGAAGCCTTTCGGTGGTGCTTCGCCGAACTGATCGACGCA
TGATGCAGCGGTTACTACTGTTTCACACCGGCGCTGTGTAGAAACGAGGG
GTCGACCGTGATGTGCGTGGACGGAGAGATTGCGAAATAGAAGATTAAGA
TTCCATTCGGAACCCCCCCCCCCCCTCGGGTGTTACCATCCATCCTTCCG
TTTTAGCATCGTCCATTCCTCAGGCAAGACAATCTGTCCGACGCCGTCGT
TTACTCAATTAGCATTTACCGACCTCGTTCTTTTTTGCCTTTGCCCTCCT
TTCTTCTTTTGCTGTCCTCGTTTAGGAAAAAGCAATCGTTTCCGTCTGTG
AATCCCTTGCTCTCTTTTTCTCGCCCTCTCCCTTTCTCGTGCACGCAGGC
TGATGTCGGCCTTTACACGACCACGGAAGACCGTTTCTTGTGTCTCACCT
TTTCTGTATATTATATGTATGTACAAGGACGAGGAGTAAGACTTGATAAC
CACGAGTGCTACGGATGACATTGTTACCGATGGCATTTTTCATTCGAATC
GTTGAGACAGCCAAAAGAGCAAAACAACACCGAGAGAACAACGCCAACAG
CAGCGAAACCGAGAATAGTTAAGGTAAAACAGAATTTGCATGTGTGACGT
TTTTTTTTCTCAACAAGCAGAGGCCCTCCCTCCCTCGTCCACAGCAGCAG
CAGCAGCAGCAGCGAAACCAAGAGTCGATCAAGGATATTTGTGCGGATTT
TTCCTTCTTGGCGTTTCCTTTGTCAACCAATAAATACGCAGAGGCGTCCG
AGCTCGAAACGTGGACCTTGAGGATCTCGAGCGAGCGGCGCAGCAGGGAA
GCCGAAGAAAGCCGGGGGCGTTGTTCCCGGCGGCAGGCAGCGGCGCGAGC
AATGACGGCAACAAGGCCTTGCGCAAGGCCGTGCGGTGGGCTGCGGGGGC
CCTCGACAAGATTCAGGTGGGTTCGCAACCGGTCGCCCGCATCGGTTTGG
ACCAGTGCGGGTGTTGGGGACGAAATAAGGTGCGGCGGCGCACAAGTCGG
GAGGAGTCAACGTGGACGAGCTTTCGCTACGCGGCTCCGACAGCAACCGC
TTGATCGATCGACTACAGTGTGAGTGCTGCTTTTGCCGCAAGACTGACGC
CCCCTGCCCCCTTTCCCTGCTTGCGCGCGGCGCGCATACGGCAGGAGATA
ATCGAGCCTGCGGCGACGCGCAGGAACAGCGTGTCTCTGAGGGCCTGGGC
GATGTGCGCCGCCCTGCTCGAGAGAGCTATCCTTCAGGCGCAGATGGTGG
GTTTCTTTATTACAATAGTAGTACGTGGCGTTGCTGATGCTTATCGTAAC
CTATGTAGGCATTCGCTAAACTCGTGGATGTGTTTTTGTTGTTTCTCACG
GTATGGAAGTACACAGAGGCGAGCAGCAAGTCCCAAGGAGCGGTCCCAAA
CGAGAGTGGTCTTATCCGCCCAACCCCTCGCCTCCCACTTTTCTGTTTTA
TTCCTGCTTTTTGCACCAGTCTGCCGATCCTGATCGCCCCCTGACCCCGG
CGGAGTGGGGAGCGCTGGAGGACGAAAAGCCCCCCCCAGAACCAGTGAGC
GAGGACAAGCTGATCGCGCTTCGTGCGCGGGAACGCGCGCTCGCCCATCT
GGAGGACGTCGAAGAAAGAGCCAAGATGGAAGATGACGGCGGGCCGCGCA
AGAGAAAAGGAGTTGATAGAGGAAGAGGGAGAGAGGAGGAGAGGATGCGG
TGGGGTGAAAAGACGGACACAACCAAGAGCGTCATGCACTGGGCCGGGGC
GGACGCGAGGAAAAATCTCTCTCCGGACGACGACGACGACGATCCGTTCG
GTCTCGATGTGCCCCCCTGGAGGGGGCGCATCACTCCGATCGATCTTCCG
GAGGAGGGTTTCGAGGGGCAAGAAGGCGGTGTGCAGGGGGGCCAAAAACG
CGAGGAGGAGGAGGAG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig6493:5969..10284-

>mRNA_L-elsbetiae_contig6493.15173.1 ID=mRNA_L-elsbetiae_contig6493.15173.1|Name=mRNA_L-elsbetiae_contig6493.15173.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2130bp|location=Sequence derived from alignment at L-elsbetiae_contig6493:5969..10284- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTACACGATACACGGTGTGGTGGCAGCAATGAGTACCACCTGTCTCG
GATCATCATGGTGCACCAGAAAAGCGAAGGCGTTAGCCTGCTGGCCCCGC
TCAAGCAGCTCGAGGCCTCGTGGGGGTACGAGCAAGTGGCGTACCCGTAC
GCCTGCTACAACGACGAGACCAAGAAATTCAAGATGGTACACGATACACG
GTGTGGTGGCAGCAATGAGTACCACCTGTCTCGGATCATCATGGTGCACC
AGAAAAGCGAAGGCGTTAGCCTGCTGGCCCCGCTCAAGCAGCTCGAGGCC
TCGTGGGGGTACGAGCAAGTGGCGTACCCGTACGCCTGCTACAACGACGA
GACCAAGAAATTCAAGGCCGACGTCTACAAGACTTTAGAGGAGCTGGTGC
CCCTCCAGGTGAACGTGCAAGCGGTGGCCAGCCGACAGGCCGACGTCTAC
AAGACTTTAGAGGAGCTGGTGCCCCTCCAGGTGAACGTGCAAGCGGTGGC
CAGCCGACAGGAGTTCTTCCAAGAAGAGAACTACGCGGTGCTTGCCCACG
TGCGCGAAAAGCTGGGCGACTTCAGCCGACAGATGCGGTCTTCGAGGAGT
TCTTCCAAGAAGAGAACTACGCGGTGCTTGCCCACGTGCGCGAAAAGCTG
GGCGACTTCAGCCGACAGATGCGGTCTTCGAGAGGCGTCCGAGCTCGAAA
CGTGGACCTTGAGGATCTCGAGCGAGCGGCGCAGCAGGGAAGCCGAAGAA
AGCCGGGGGCGTTGTTCCCGGCGGCAGGCAGCGGCGCGAGCAATGACGGC
AACAAGGCCTTGCGCAAGGCCGTGCGGTGGGCTGCGGGGGCCCTCGACAA
GATTCAGAGGCGTCCGAGCTCGAAACGTGGACCTTGAGGATCTCGAGCGA
GCGGCGCAGCAGGGAAGCCGAAGAAAGCCGGGGGCGTTGTTCCCGGCGGC
AGGCAGCGGCGCGAGCAATGACGGCAACAAGGCCTTGCGCAAGGCCGTGC
GGTGGGCTGCGGGGGCCCTCGACAAGATTCAGGAGATAATCGAGCCTGCG
GCGACGCGCAGGAACAGCGTGTCTCTGAGGGCCTGGGCGATGTGCGCCGC
CCTGCTCGAGAGAGCTATCCTTCAGGCGCAGATGGAGATAATCGAGCCTG
CGGCGACGCGCAGGAACAGCGTGTCTCTGAGGGCCTGGGCGATGTGCGCC
GCCCTGCTCGAGAGAGCTATCCTTCAGGCGCAGATGTCTGCCGATCCTGA
TCGCCCCCTGACCCCGGCGGAGTGGGGAGCGCTGGAGGACGAAAAGCCCC
CCCCAGAACCAGTGAGCGAGGACAAGCTGATCGCGCTTCGTGCGCGGGAA
CGCGCGCTCGCCCATCTGGAGGACGTCGAAGAAAGAGCCAAGATGGAAGA
TGACGGCGGGCCGCGCAAGAGAAAAGGAGTTGATAGAGGAAGAGGGAGAG
AGGAGGAGAGGATGCGGTGGGGTGAAAAGACGGACACAACCAAGAGCGTC
ATGCACTGGGCCGGGGCGGACGCGAGGAAAAATCTCTCTCCGGACGACGA
CGACGACGATCCGTTCGGTCTCGATGTGCCCCCCTGGAGGGGGCGCATCA
CTCCGATCGATCTTCCGGAGGAGGGTTTCGAGGGGCAAGAAGGCGGTGTG
CAGGGGGGCCAAAAACGCGAGGAGGAGGAGGAGTCTGCCGATCCTGATCG
CCCCCTGACCCCGGCGGAGTGGGGAGCGCTGGAGGACGAAAAGCCCCCCC
CAGAACCAGTGAGCGAGGACAAGCTGATCGCGCTTCGTGCGCGGGAACGC
GCGCTCGCCCATCTGGAGGACGTCGAAGAAAGAGCCAAGATGGAAGATGA
CGGCGGGCCGCGCAAGAGAAAAGGAGTTGATAGAGGAAGAGGGAGAGAGG
AGGAGAGGATGCGGTGGGGTGAAAAGACGGACACAACCAAGAGCGTCATG
CACTGGGCCGGGGCGGACGCGAGGAAAAATCTCTCTCCGGACGACGACGA
CGACGATCCGTTCGGTCTCGATGTGCCCCCCTGGAGGGGGCGCATCACTC
CGATCGATCTTCCGGAGGAGGGTTTCGAGGGGCAAGAAGGCGGTGTGCAG
GGGGGCCAAAAACGCGAGGAGGAGGAGGAG
back to top