mRNA_L-elsbetiae_contig6290.14917.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6290.14917.1 vs. uniprot
Match: A0A6H5K458_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K458_9PHAE) HSP 1 Score: 309 bits (792), Expect = 3.210e-98 Identity = 171/248 (68.95%), Postives = 199/248 (80.24%), Query Frame = 1 Query: 337 MACASQTKAAAFHGK--AKRARTSSYNGYSAAEGSQYHSADEATSEEEHKGSHPRRWSSEEDERLRASVEKHQGTNWKEIAREVKSRNHVQCLQRWKKVLTPGLVKGQWTVEEDQLLVSVVDEGHKNWGSLSARIPGRTSKQCRERWCHHLDPRIVKGQWTAAEDATIVSMQKRIGNKWAQIAQHLDGRTENATKIRWKILERELKREGDEPEEEDEKPPREPSSH-QSAGVRLRCLAAQAAASVLSK 1071 MACASQT AA GK AKRART+SY S+ H+++ E++ +G HPRRWS EEDERLRA+VE++ GT+WKEIA EVK+RNHVQCLQRWKKVLTPGLVKGQWT EED+LLVS+V+EGHKNWGSLSAR+PGRTSKQCRERWCHHLDPRIVKG WT ED IVS+Q+++GNKWA+IAQHLDGRTENATKIRWKILER +K+E +E E+ E R SS + RLRCL +QAA S LSK Sbjct: 23 MACASQT-AARTPGKPQAKRARTASYQ-------SRKHTSESPRIEDQDQGPHPRRWSPEEDERLRAAVERYHGTSWKEIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWTPEEDKLLVSIVNEGHKNWGSLSARVPGRTSKQCRERWCHHLDPRIVKGGWTEEEDQIIVSLQQQMGNKWAKIAQHLDGRTENATKIRWKILERGMKKE-EEMHEDKETSSRGASSRPKRPDARLRCLDSQAATSALSK 261
BLAST of mRNA_L-elsbetiae_contig6290.14917.1 vs. uniprot
Match: D7FQG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG8_ECTSI) HSP 1 Score: 307 bits (786), Expect = 8.830e-94 Identity = 155/208 (74.52%), Postives = 175/208 (84.13%), Query Frame = 1 Query: 487 HPRRWSSEEDERLRASVEKHQGTNWKEIAREVKSRNHVQCLQRWKKVLTPGLVKGQWTVEEDQLLVSVVDEGHKNWGSLSARIPGRTSKQCRERWCHHLDPRIVKGQWTAAEDATIVSMQKRIGNKWAQIAQHLDGRTENATKIRWKILERELKREGDEPEEEDEKPPREPSSHQSAGVRLRCLAAQAAASVLSKAGNPEGGPIGAPK 1110 HPRRWS EEDERLRA+VE++ GTNWKEIA EVK+RNHVQCLQRWKKVLTPGLVKGQWT EEDQLLVS+V+EGHKNWGSLSARIPGRTSKQCRERWCHHLDPRIVKG WT AED I+ +Q+++GNKWAQIAQHLDGRTENATKIRWKILERE+K+E + E+++ S + RLRCLAAQAA S LSK + G P+G PK Sbjct: 16 HPRRWSLEEDERLRAAVERYHGTNWKEIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWTPEEDQLLVSIVNEGHKNWGSLSARIPGRTSKQCRERWCHHLDPRIVKGGWTEAEDQMIILLQQQMGNKWAQIAQHLDGRTENATKIRWKILEREMKKEEERHEDKETSSRGASSRPKRPDARLRCLAAQAATSALSKTQSSLG-PVGVPK 222
BLAST of mRNA_L-elsbetiae_contig6290.14917.1 vs. uniprot
Match: A0A7S2UU49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU49_9STRA) HSP 1 Score: 220 bits (560), Expect = 3.350e-65 Identity = 116/211 (54.98%), Postives = 147/211 (69.67%), Query Frame = 1 Query: 490 PRRWSSEEDERLRASVEKHQGTNWKEIAREVKSRNHVQCLQRWKKVLTPGLVKGQWTVEEDQLLVSVVDEGHKNWGSLSARIPGRTSKQCRERWCHHLDPRIVKGQWTAAEDATIVSMQKRIGNKWAQIAQHLDGRTENATKIRWKILERELKREGDEPEEEDEKPPREPSSHQSAGVRLRCLAAQAAASVLSKA----GNPEGGPIGAPK 1110 PR+W+ EDE LR +V K+ +NWK+IAREV +RNHVQCLQRWKKVL PGLVKGQW+ ED LV +V +G KNWG L+A++PGRTSKQCRERW HHLDP + KG++T ED TI+ +Q +GNKW++IA+HL GRTENA KIRWK L+R + G + + P SH L+ LAAQAA + ++KA G G P G P+ Sbjct: 27 PRKWTLVEDEELRHAVRKYGESNWKDIAREVGTRNHVQCLQRWKKVLKPGLVKGQWSALEDAKLVDLVGKGFKNWGQLAAQMPGRTSKQCRERWSHHLDPSVKKGEYTTEEDNTILRLQSELGNKWSEIAKHLPGRTENAVKIRWKALDRLRQNAGSGRGQAQIRSRNHPDSH------LKVLAAQAAVAAIAKAQLHCGQEGGLPAGYPR 231
BLAST of mRNA_L-elsbetiae_contig6290.14917.1 vs. uniprot
Match: H3G911_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G911_PHYRM) HSP 1 Score: 198 bits (504), Expect = 2.640e-59 Identity = 92/148 (62.16%), Postives = 111/148 (75.00%), Query Frame = 1 Query: 490 PRRWSSEEDERLRASVEKHQGTNWKEIAREVKSRNHVQCLQRWKKVLTPGLVKGQWTVEEDQLLVSVVDEGHKNWGSLSARIPGRTSKQCRERWCHHLDPRIVKGQWTAAEDATIVSMQKRIGNKWAQIAQHLDGRTENATKIRWKIL 933 P+RW+ EEDE+LR +V +H NWK IA EV RNH QCLQRW KVL PGLVKG W +ED LL +V EG KNWG ++ RIPGRTSKQCRERW +HLDP IV+G+++A ED I+ Q R+GN+W+ IA L GRTE+A KIRWK L Sbjct: 9 PKRWTPEEDEKLREAVNRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGEYSAEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSL 156
BLAST of mRNA_L-elsbetiae_contig6290.14917.1 vs. uniprot
Match: A0A3M6VKU0_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKU0_9STRA) HSP 1 Score: 196 bits (497), Expect = 4.170e-57 Identity = 90/148 (60.81%), Postives = 111/148 (75.00%), Query Frame = 1 Query: 490 PRRWSSEEDERLRASVEKHQGTNWKEIAREVKSRNHVQCLQRWKKVLTPGLVKGQWTVEEDQLLVSVVDEGHKNWGSLSARIPGRTSKQCRERWCHHLDPRIVKGQWTAAEDATIVSMQKRIGNKWAQIAQHLDGRTENATKIRWKIL 933 P+RW+ EDE+LR +V +H NWK IA EV RNH QCLQRW KVL PGLVKG W +ED+LL +V EG KNWG ++ RIPGRTSKQCRERW +HLDP I++G+++ AED I+ Q R+GN+W+ IA L GRTE+A KIRWK L Sbjct: 99 PKRWTPTEDEKLRDAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDELLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIIRGEYSQAEDRMILDAQSRLGNRWSAIAAMLPGRTEDAVKIRWKSL 246
BLAST of mRNA_L-elsbetiae_contig6290.14917.1 vs. uniprot
Match: D0NJN5_PHYIT (Myb-like DNA-binding protein, putative n=2 Tax=Phytophthora TaxID=4783 RepID=D0NJN5_PHYIT) HSP 1 Score: 195 bits (496), Expect = 4.330e-57 Identity = 90/148 (60.81%), Postives = 110/148 (74.32%), Query Frame = 1 Query: 490 PRRWSSEEDERLRASVEKHQGTNWKEIAREVKSRNHVQCLQRWKKVLTPGLVKGQWTVEEDQLLVSVVDEGHKNWGSLSARIPGRTSKQCRERWCHHLDPRIVKGQWTAAEDATIVSMQKRIGNKWAQIAQHLDGRTENATKIRWKIL 933 P+RW+ EED++LR +V +H NWK IA EV RNH QCLQRW KVL PGLVKG W EED LL +V EG KNWG ++ RIPGRTSKQCRERW +HLDP I++G+++ ED I+ Q R+GN+W+ IA L GRTE+A KIRWK L Sbjct: 82 PKRWTPEEDDKLREAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPEEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIIRGEYSPEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSL 229
BLAST of mRNA_L-elsbetiae_contig6290.14917.1 vs. uniprot
Match: A0A2P4Y3D9_9STRA (Myb-like DNA-binding protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y3D9_9STRA) HSP 1 Score: 197 bits (502), Expect = 6.110e-57 Identity = 94/156 (60.26%), Postives = 115/156 (73.72%), Query Frame = 1 Query: 490 PRRWSSEEDERLRASVEKHQGTNWKEIAREVKSRNHVQCLQRWKKVLTPGLVKGQWTVEEDQLLVSVVDEGHKNWGSLSARIPGRTSKQCRERWCHHLDPRIVKGQWTAAEDATIVSMQKRIGNKWAQIAQHLDGRTENATKIRWKILERELKREG 957 P+RW+ EED++LR +V +H NWK IA EV RNH QCLQRW KVL PGLVKG W +ED+LL +V EG KNWG ++ RIPGRTSKQCRERW +HLDP IV+G++T ED I+ Q R+GN+W+ IA L GRTE+A KIRWK L R K +G Sbjct: 91 PKRWTQEEDDKLREAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDELLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGEYTQEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSLCRVRKGQG 246
BLAST of mRNA_L-elsbetiae_contig6290.14917.1 vs. uniprot
Match: A0A418B0H6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B0H6_9STRA) HSP 1 Score: 201 bits (511), Expect = 4.100e-56 Identity = 96/152 (63.16%), Postives = 113/152 (74.34%), Query Frame = 1 Query: 484 SHPRRWSSEEDERLRASVEKHQGTNWKEIAREVKSRNHVQCLQRWKKVLTPGLVKGQWTVEEDQLLVSVVDEGHKNWGSLSARIPGRTSKQCRERWCHHLDPRIVKGQWTAAEDATIVSMQKRIGNKWAQIAQHLDGRTENATKIRWKILER 939 S+PRRWS EDE LR +VE+ NWK IA +V RNH QCLQRW KVL PGL+KG WT EED L ++V EG KNWG +++ IPGRTSKQCRERWC+HLDP I KG +T ED IV MQ ++GN+W+ IAQ L GRTE+A KIRWK L R Sbjct: 106 SNPRRWSKAEDESLRLAVERSGERNWKAIADQVAGRNHTQCLQRWTKVLKPGLIKGHWTPEEDAKLRTLVAEGRKNWGQVASHIPGRTSKQCRERWCNHLDPNINKGNYTREEDQLIVDMQAKLGNRWSVIAQQLSGRTEDAVKIRWKSLMR 257
BLAST of mRNA_L-elsbetiae_contig6290.14917.1 vs. uniprot
Match: A0A2D4C0J9_PYTIN (Uncharacterized protein n=4 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C0J9_PYTIN) HSP 1 Score: 203 bits (517), Expect = 9.650e-56 Identity = 96/148 (64.86%), Postives = 112/148 (75.68%), Query Frame = 1 Query: 490 PRRWSSEEDERLRASVEKHQGTNWKEIAREVKSRNHVQCLQRWKKVLTPGLVKGQWTVEEDQLLVSVVDEGHKNWGSLSARIPGRTSKQCRERWCHHLDPRIVKGQWTAAEDATIVSMQKRIGNKWAQIAQHLDGRTENATKIRWKIL 933 P+RW+ EED+ LRA+V KH NWK IA EV RNH QCLQRW KVL PGLVKG W EED+LL +V EG KNWG ++ RIPGRTSKQCRERW +HLDP IV+G++TA ED I+ Q R+GNKW+ IA L GRTE+A KIRWK L Sbjct: 162 PKRWTQEEDDMLRAAVAKHGERNWKAIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPEEDELLKELVAEGRKNWGQVANRIPGRTSKQCRERWYNHLDPSIVRGEYTAEEDRIIIEAQARLGNKWSTIAAMLPGRTEDAVKIRWKSL 309
BLAST of mRNA_L-elsbetiae_contig6290.14917.1 vs. uniprot
Match: A0A0W8DM41_PHYNI (Gamma-soluble NSF attachment protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DM41_PHYNI) HSP 1 Score: 197 bits (500), Expect = 2.540e-55 Identity = 94/156 (60.26%), Postives = 115/156 (73.72%), Query Frame = 1 Query: 490 PRRWSSEEDERLRASVEKHQGTNWKEIAREVKSRNHVQCLQRWKKVLTPGLVKGQWTVEEDQLLVSVVDEGHKNWGSLSARIPGRTSKQCRERWCHHLDPRIVKGQWTAAEDATIVSMQKRIGNKWAQIAQHLDGRTENATKIRWKILERELKREG 957 P+RW+ EED++LR +V +H NWK IA EV RNH QCLQRW KVL PGLVKG W EED+LL +V EG KNWG ++ RIPGRTSKQCRERW +HLDP IV+G+++ ED I+ Q R+GN+W+ IA L GRTE+A KIRWK L R K +G Sbjct: 112 PKRWTPEEDDKLREAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPEEDELLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGEYSPEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSLCRVRKGQG 267 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6290.14917.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6290.14917.1 >prot_L-elsbetiae_contig6290.14917.1 ID=prot_L-elsbetiae_contig6290.14917.1|Name=mRNA_L-elsbetiae_contig6290.14917.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=274bp MRAKREENKRGAMACASQTKAAAFHGKAKRARTSSYNGYSAAEGSQYHSAback to top mRNA from alignment at L-elsbetiae_contig6290:919..10882- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6290.14917.1 ID=mRNA_L-elsbetiae_contig6290.14917.1|Name=mRNA_L-elsbetiae_contig6290.14917.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9964bp|location=Sequence derived from alignment at L-elsbetiae_contig6290:919..10882- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6290:919..10882- >mRNA_L-elsbetiae_contig6290.14917.1 ID=mRNA_L-elsbetiae_contig6290.14917.1|Name=mRNA_L-elsbetiae_contig6290.14917.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1644bp|location=Sequence derived from alignment at L-elsbetiae_contig6290:919..10882- (Laminarionema elsbetiae ELsaHSoW15)back to top |