mRNA_L-elsbetiae_contig6241.14843.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6241.14843.1 vs. uniprot
Match: D7G4K4_ECTSI (Spondin domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G4K4_ECTSI) HSP 1 Score: 349 bits (895), Expect = 1.020e-119 Identity = 169/220 (76.82%), Postives = 190/220 (86.36%), Query Frame = 1 Query: 82 MVKYTALFALASALYASCANAKEFKVRVRNLTYQQPFSPPLIVAHTNDVALFKEGFAASDAIKRMAEDGNNSGLLELAESPDVAPYICGAAAADGPVFPGDTWRGTLEVDETACPNPQYSIVTMLIHTNDAFLGIDSDDLDMNGAVKVFPPAFDAGTETNNELCSHIPGPACGMESGNMRDGPGEGFIHIHRGFHGVGDELSEAGYDWRNPVAEVFIAPQ 741 MVK+TA FALAS L S A+A +FKVRVRNLTY QPFSP L+VAHTNDVALFKEG ASDAIK MAEDG+NS LLELA S DVAPYICGA A +GPVFPG+TWRGTL +DE+ACP+P YS+V+MLI+TNDAF+GIDSDDL++ G+ KVFPPAFDAGTE NNELC+HIPGPAC +SGNM D PGE FIH+HRGFHGVG +L EA YDWRNPVAEVFIA Q Sbjct: 1 MVKFTAGFALASVL--SLAHATDFKVRVRNLTYLQPFSPMLVVAHTNDVALFKEGLPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDESACPDPVYSVVSMLINTNDAFVGIDSDDLNVYGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDVPGEEFIHVHRGFHGVGPDLGEANYDWRNPVAEVFIARQ 218
BLAST of mRNA_L-elsbetiae_contig6241.14843.1 vs. uniprot
Match: D7FIE5_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIE5_ECTSI) HSP 1 Score: 318 bits (815), Expect = 1.820e-107 Identity = 155/222 (69.82%), Postives = 181/222 (81.53%), Query Frame = 1 Query: 82 MVKYTALFALASALYASCANAKE-----FKVRVRNLTYQQPFSPPLIVAHTNDVALFKEGFAASDAIKRMAEDGNNSGLLELAESPDVAPYICGAAAADGPVFPGDTWRGTLEVDETACPNPQYSIVTMLIHTNDAFLGIDSDDLDMNGAVKVFPPAFDAGTETNNELCSHIPGPACGMESGNMRDGPGEGFIHIHRGFHGVGDELSEAGYDWRNPVAEVFI 732 MV +TA FA+AS + + A+ K+ FKVRVRNLTY QPFSPPLIVAHT DVALFKEGF A+DAIK MAEDG+NS LLEL+ES DVAPYICG A+GPVFPG+TWRG L+VD CPNP YS+VTMLI+TNDAF+GIDSD L++ G+ K FPPAFDAGTE N+E CS+IPGP C SGN ++GPGEG+IH+HRG HGVGD L EA YDWRNPVAE++I Sbjct: 1 MVNFTAAFAMASLVSLANASGKDYNTVPFKVRVRNLTYLQPFSPPLIVAHTKDVALFKEGFPANDAIKLMAEDGDNSALLELSESSDVAPYICGVVVAEGPVFPGETWRGQLDVDPYICPNPVYSVVTMLINTNDAFVGIDSDTLEL-GSTKAFPPAFDAGTEVNDERCSNIPGPGCPAGSGNNQNGPGEGYIHVHRGVHGVGD-LEEASYDWRNPVAEIYI 220
BLAST of mRNA_L-elsbetiae_contig6241.14843.1 vs. uniprot
Match: D7G4K3_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4K3_ECTSI) HSP 1 Score: 299 bits (765), Expect = 3.670e-100 Identity = 140/200 (70.00%), Postives = 162/200 (81.00%), Query Frame = 1 Query: 136 ANAKEFKVRVRNLTYQQPFSPPLIVAHTNDVALFKEGFAASDAIKRMAEDGNNSGLLELAESPDVAPYICGAAAADGPVFPGDTWRGTLEVDETACPNPQYSIVTMLIHTNDAFLGIDSDDLDMNGAVKVFPPAFDAGTETNNELCSHIPGPACGMESGNMRDGPGEGFIHIHRGFHGVGDELSEAGYDWRNPVAEVFIA 735 ANA E VRVRNLTY QPFSP +VAHTNDV++F+EGF ASDA+K MAEDG+NS L+EL S DV PYICG + P+FPGDTWRG + VDE+ CP+ QYS+V+MLI+TNDAF+GIDS+ L G KVFPPAFDAGTE NNELC+HIPGPAC +SGNM DGPGEGFI + RGFHGVG +L EA YDWRNPVAEV +A Sbjct: 2 ANAGEVYVRVRNLTYLQPFSPMFVVAHTNDVSIFREGFPASDAVKIMAEDGDNSALVELLASEDVEPYICGGVMGEAPLFPGDTWRGVMTVDESICPDAQYSVVSMLINTNDAFVGIDSNRL--VGTEKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDGPGEGFISVSRGFHGVGPDLGEANYDWRNPVAEVVVA 199
BLAST of mRNA_L-elsbetiae_contig6241.14843.1 vs. uniprot
Match: D7G413_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G413_ECTSI) HSP 1 Score: 192 bits (489), Expect = 2.700e-58 Identity = 104/199 (52.26%), Postives = 127/199 (63.82%), Query Frame = 1 Query: 151 FKVRVRNLTYQQPFSPPLIVAHTNDVALFKEGFAASDAIKRMAEDGNNSGLLELAESPDVAPYICGAAAADGPVFPGDTWRGTLEVDETACPNPQYSIVTMLIHTNDAFLGIDSDDLDMNGAVKVFPPAFDAGTETNNELCSHIPGPACGMESGNMRDGPG----EGFIHIHRGFHGVGDELSEAGYDWRNPVAEVFIA 735 +KVRV NLT++Q FSPP+IVAH LF +G A AIKRMAE+G N + +A D CG AAA+GP+ PG TW G + D C P YS+V L +TNDAF+GID K+FPPAFDAGTE NNE C+ I G AC S R+ G EGFIH+HRG +GVGD LS+A YDW+NPVAEV ++ Sbjct: 4 YKVRVTNLTFKQDFSPPIIVAHEKGSPLFSKGRKARGAIKRMAEEGVNRFIEIIATREDG---FCGFAAAEGPLLPGKTWNGEITFDANKCKRPVYSVVAKLTNTNDAFMGIDGSKFLDKRPSKLFPPAFDAGTEKNNEKCTCIRGRAC-PASPKPRENLGGRGSEGFIHVHRGINGVGD-LSQADYDWKNPVAEVVVS 197
BLAST of mRNA_L-elsbetiae_contig6241.14843.1 vs. uniprot
Match: D7G3Z4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Z4_ECTSI) HSP 1 Score: 193 bits (490), Expect = 1.490e-57 Identity = 103/197 (52.28%), Postives = 125/197 (63.45%), Query Frame = 1 Query: 154 KVRVRNLTYQQPFSPPLIVAHTNDVALFKEGFAASDAIKRMAEDGNNSGLLELAESPDVAPYICGAAAADGPVFPGDTWRGTLEVDETACPNPQYSIVTMLIHTNDAFLGIDSDDLDMNGAVKVFPPAFDAGTETNNELCSHIPGPACGMESGNMRDGPG---EGFIHIHRGFHGVGDELSEAGYDWRNPVAEVFIA 735 KVRV NLT++Q FSPP+IVAH LF G A AIK MAEDGNN ++ +A CG AAA+GP+ PG TW G + D C P YS+V L +TNDAF+GID K+FPPAFDAGTE NNE C+ +PG AC S R+ G EGFIH+HRG +GVGD LS+A Y W+NPVAEV ++ Sbjct: 76 KVRVTNLTFKQDFSPPIIVAHEKGSHLFPVGGKARPAIKLMAEDGNNRNIMAIATREGG---FCGFAAAEGPLLPGKTWNGEITFDTDKCKEPVYSVVAKLTNTNDAFMGIDGSKFLDKHPSKLFPPAFDAGTEKNNEKCTCMPGRAC-PASPKSRENHGLGSEGFIHVHRGINGVGD-LSKADYGWKNPVAEVVVS 267
BLAST of mRNA_L-elsbetiae_contig6241.14843.1 vs. uniprot
Match: D7G405_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G405_ECTSI) HSP 1 Score: 187 bits (474), Expect = 7.040e-56 Identity = 106/216 (49.07%), Postives = 134/216 (62.04%), Query Frame = 1 Query: 100 LFALASALYASCANAKEFKVRVRNLTYQQPFSPPLIVAHTNDVA-LFKEGFAASDAIKRMAEDGNNSGLLELAESPDVAPYICGAAAADGPVFPGDTWRGTLEVDETACPNPQYSIVTMLIHTNDAFLGIDSDDLDMNGAVKVFPPAFDAGTETNNELCSHIPGPACGMESGNMRDGPG---EGFIHIHRGFHGVGDELSEAGYDWRNPVAEVFIA 735 + +LAS S ++ K +KVRV NLT++Q FSPP+IVAH LF G A AIKRMAE+G N G++++ + + CG A A+GP+ PG TW G + D C P YS+V L +TNDAF+GID K FPPAFDAGTE NNE C+ +PG AC S R+ G EGFIH+HRG GVGD LS+A Y W NPVAEV ++ Sbjct: 1 MLSLASGGSTSGSSMKTYKVRVTNLTFKQDFSPPIIVAHEKGSRPLFSMGGKARPAIKRMAEEGVN-GMVKVIATRESG--FCGFAVAEGPLLPGKTWNGEITFDTNKCKEPVYSVVAKLTNTNDAFMGIDGSKFLDKCPSKRFPPAFDAGTEKNNEKCTCMPGRAC-PASPKTRENHGRGSEGFIHVHRGIDGVGD-LSKADYGWNNPVAEVVVS 211
BLAST of mRNA_L-elsbetiae_contig6241.14843.1 vs. uniprot
Match: D7G3Z6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Z6_ECTSI) HSP 1 Score: 162 bits (410), Expect = 4.830e-46 Identity = 98/231 (42.42%), Postives = 132/231 (57.14%), Query Frame = 1 Query: 82 MVKYTALFALASALYASCANA------KEFKVRVRNLTYQQPFSPPLIVAHTNDVA-LFKEGFAASDAIKRMAEDGNNSGLLELAESPDVAPYICGAAAAD--GPVFPGDTWRGTLEVDETACPNPQYSIVTMLIHTNDAFLGIDSDDLDMNGAV-KVFPPAFDAGTETNNELCSHIPGPACGMESGNMRDGPG---EGFIHIHRGFHGVGDELSEAGYDWRNPVAEVFIA 735 MVK+ ALAS L + + + +KVRV NLT++Q FS +IVAH LF EG A +AI +AE+G + + +A CG AA + G +FPG TW G ++ D C +P YS+V L +TNDAF+GI K FPPAFDAG+ETNNE C+ +PG AC + + R+ G EGFIH+HRGF G+GD + Y W+NPVA V ++ Sbjct: 1 MVKFAFGLALASMLSLASGSKMRGSRMQTYKVRVTNLTFKQDFSAAIIVAHEKGSRPLFSEGAKARNAISMLAEEGLSGNVQNIATR---ERGFCGFAAPESKGLIFPGKTWEGKIQFDANKCKDPVYSVVAKLDNTNDAFMGIAGSKFPAGSCPSKHFPPAFDAGSETNNEKCTCMPGRACPKGTRDARERHGRNSEGFIHVHRGFQGIGDLSKD--YGWQNPVAVVVVS 226
BLAST of mRNA_L-elsbetiae_contig6241.14843.1 vs. uniprot
Match: UPI0013156A5F (spondin domain-containing protein n=1 Tax=Agarilytica rhodophyticola TaxID=1737490 RepID=UPI0013156A5F) HSP 1 Score: 150 bits (378), Expect = 2.290e-41 Identity = 91/211 (43.13%), Postives = 129/211 (61.14%), Query Frame = 1 Query: 100 LFALASALYASCANAKEFKVRVRNLTYQQPFSPPLIVAHTNDVALFKEGFAASDAIKRMAEDGNNSGLLELAESPDVAPYICGAAAADGPVFPGDTWRGTLEVDETACPNPQYSIVTMLIHTNDAFLGIDSDDLDMNGAVKVFPPAFDAGTETNNELCSHIPGPACGMESGNMRDGPGEGFIHIHRGFHGVGDELSEAGYDWRNPVAEVFI 732 +F L SA A AN +++V+V N+T Q F+P L VAH++ V+LF G AS+ I MAE GN + L L E + + A++ G + PG++ T+ + + + + S+ ML+ TND F+ IDS + NG+V + A+DAG+ETN+ELC+ IPGP CG E + D GEGF+HI G HGVGD L A YDWR+ VA+V I Sbjct: 13 IFGLISATSAF-ANGPQYQVKVTNITKGQSFTPILTVAHSSPVSLFTLGEPASEEIAAMAEAGNIAPLRTLVEG---SSSVSDTASSQGLLGPGES---TVMMVTGSYNDMRVSMAAMLLPTNDTFMAIDSVRVPYNGSVVAYAKAYDAGSETNDELCASIPGPLCGGEPLSPND-DGEGFVHISSGIHGVGD-LGSAAYDWRDAVAKVEI 214
BLAST of mRNA_L-elsbetiae_contig6241.14843.1 vs. uniprot
Match: A0A525CZJ5_9DELT (Spondin domain-containing protein n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A525CZJ5_9DELT) HSP 1 Score: 148 bits (373), Expect = 2.190e-40 Identity = 86/203 (42.36%), Postives = 120/203 (59.11%), Query Frame = 1 Query: 127 ASCANAKEFKVRVRNLTYQQPFSPPLIVAHTNDVALFKEGFAASDAIKRMAEDGNNSGLLELAESPDVAPYICGAAAADGPVFPGDTWRGTLEVDETACPNPQYSIVTMLIHTNDAFLGIDSDDLDMNGAVKVFPPAFDAGTETNNELCSHIPGPACGMESGNMRD-GPGEGFIHIHRGFHGVGDELSEAGYDWRNPVAEVFI 732 A + F+V + NLT Q FSPP+++AH ND LF G AS+A+ +AEDG+ SGL+++AE+ P I G A ADGPV PG + ++ TA + S+ ML+ TNDAF + ++ A+DAG+E N+E CS IPGP CG +G +R+ EG++HIH G HG D +S A +DW NPVA + I Sbjct: 41 ALAQGTRTFEVTITNLTGGQIFSPPIVLAHDNDFNLFTLGEPASEALTGLAEDGDTSGLVDMAEN---MPSIYGYAMADGPVLPGTSAVVEIDTHHTA---KRLSVAGMLVTTNDAFFAVRGARTWGIFLEPLYASAYDAGSEVNSENCSDIPGPPCG--NGGVRNTADAEGYVHIHAGIHGTMD-ISTAEFDWNNPVALIRI 234
BLAST of mRNA_L-elsbetiae_contig6241.14843.1 vs. uniprot
Match: A0A433PQD1_9FUNG (Spondin domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PQD1_9FUNG) HSP 1 Score: 145 bits (366), Expect = 1.850e-39 Identity = 86/203 (42.36%), Postives = 117/203 (57.64%), Query Frame = 1 Query: 145 KEFKVRVRNLTYQQPFSPPLIVAHTNDVALFKEGFAASDAIKRMAEDGNNSGLLELAESPDVAPYICGAAAADGPVFPGDTWRGTLEVDETACPNPQYSIVTMLIHTNDAFLGIDSDDLDMNGAVKVFPPAFDAGTETNNELCSHIPGPACGMESGNMRDGPGEGFIHIHRGFHGVGDELSEAG----YDWRNPVAEVFIAPQ 741 K F + V+NL Y QPFSP L V H + LF+ G AS A++ +AE G+ S + L + D ICG + A G P T++GT+ + + C NP SIV ML TNDAF GI++ L + + PA+DAGTE NNE C ++ G C G GEGF+H+HRG HG+ +S+ G YDWRNPVA + ++ Q Sbjct: 26 KTFDITVQNLAYLQPFSPVLAVIHEPSIYLFQLGTPASAALRAVAEGGDPSKFVALFQ--DGLEGICGWSVAPGKTLPSTTYKGTVTISKP-CTNPHISIVNMLGITNDAFTGINTIPLYGELSKRFEVPAYDAGTEENNEDCQYVFG--CPGSPNLDTPGLGEGFVHVHRGVHGL--NVSKPGLSVDYDWRNPVAYITVSVQ 221 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6241.14843.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6241.14843.1 >prot_L-elsbetiae_contig6241.14843.1 ID=prot_L-elsbetiae_contig6241.14843.1|Name=mRNA_L-elsbetiae_contig6241.14843.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=248bp ANPLTLLTFNPPLLSSLFGVHLAQLYKMVKYTALFALASALYASCANAKEback to top mRNA from alignment at L-elsbetiae_contig6241:6933..9999- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6241.14843.1 ID=mRNA_L-elsbetiae_contig6241.14843.1|Name=mRNA_L-elsbetiae_contig6241.14843.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3067bp|location=Sequence derived from alignment at L-elsbetiae_contig6241:6933..9999- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6241:6933..9999- >mRNA_L-elsbetiae_contig6241.14843.1 ID=mRNA_L-elsbetiae_contig6241.14843.1|Name=mRNA_L-elsbetiae_contig6241.14843.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1488bp|location=Sequence derived from alignment at L-elsbetiae_contig6241:6933..9999- (Laminarionema elsbetiae ELsaHSoW15)back to top |