mRNA_L-elsbetiae_contig620.14784.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig620.14784.1 vs. uniprot
Match: D7FPG6_ECTSI (SAP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPG6_ECTSI) HSP 1 Score: 521 bits (1343), Expect = 1.640e-175 Identity = 302/465 (64.95%), Postives = 337/465 (72.47%), Query Frame = 1 Query: 4 VSSSDRQYRRRLRSWRCSLLGAGLSLGL---LGTVDSFNPPL--------GGRLSPLPWLRDACSTRTERSQRSAISGALYTSPEVSGHTTSGGGSGRNTSRRGERRKSRLGIAAGTNGDSGGPGEHAGMKQGTEQQPXXXXXRRQQPNGYEMDKGWMGNSWAAGDGATRG-----IAGAGXXXXXXXXXXXXXXKESMEAAAKQSVPLKVMVFVDGTWLYYSFFGRGERCHVSAKLGPGWVYEYKVKWEMLPTIISRAIHAQLEQLGQSSRLVEVVRTVVFSSARKDTDKDSNRMKMFNAMREKNFEVHMATTMGVQEKCIDIALAVEMMHYATIPDTYDVGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQALLRDDAHVMDFQPVWINEHLDDLMEYCPPAAGFGVNNVKVAPEILCQVVMKLMEQRGGTIDSRDLGRALNAISVDGGGATALSVIKE 1350 + S ++ RRRLRSWR S+ G+G+ +GL D FNPPL G L L R ST T R QR+A LY S + S H +G G + S+RG RR SRL A + D+GGP Q+ NGY+M++ G +W G + + XXXXXX +ESM+AAAK SVPLKVMVF+DGTWLYYSFFGRGERCHVSAKLGPGWVYEY VKWEMLP IISRA+HAQL + GQSSRLVEVVRTVVFSSARKDTDKDS RM+MFNAMREKNFEVHMATT+GVQEKCIDIALAVEMMHYATIPDTYDVGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQALLRDDAHV DF+P+WINE+LDDLMEY PP G G N VKVAPEILCQVVMKL+EQ+GG+I+SR LGR LN ISVD G TALSVIKE Sbjct: 3 LPSDSQRRRRRLRSWRGSVSGSGILIGLQLLARGADGFNPPLLEPSAAGLGVGLLSLAEQRRLPSTSTTRWQRTAPDNRLY-SEDSSTHNPAGS-RGCHGSKRGARRGSRLAAA---DDDNGGP-------------------EYQRRNGYDMEERLEGRAWVVEGGXXXXXXXXDVGVSXXXXXXXAVSNAVPTEESMDAAAKLSVPLKVMVFIDGTWLYYSFFGRGERCHVSAKLGPGWVYEYNVKWEMLPVIISRAVHAQLARYGQSSRLVEVVRTVVFSSARKDTDKDSTRMRMFNAMREKNFEVHMATTVGVQEKCIDIALAVEMMHYATIPDTYDVGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQALLRDDAHVTDFEPIWINEYLDDLMEYVPPVEGIGANKVKVAPEILCQVVMKLVEQQGGSINSRLLGRELNKISVDEDGTTALSVIKE 443
BLAST of mRNA_L-elsbetiae_contig620.14784.1 vs. uniprot
Match: A0A835YIR6_9STRA (NYN domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIR6_9STRA) HSP 1 Score: 248 bits (633), Expect = 1.490e-76 Identity = 128/245 (52.24%), Postives = 167/245 (68.16%), Query Frame = 1 Query: 580 LKVMVFVDGTWLYYSFFGRGER-CHVSAKLGPGWVYEYKVKWEMLPTIISRAIHAQLEQLGQSSRLVEVVRTVVFSSARKDTDKDSNRMKMFNAMREKNFEVHMATTMGVQEKCIDIALAVEMMHYATIPDTY-----DVGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQALLRDDAHVMDFQPVWINEHLDDLMEYCPPAAGFGVNNVKVAPEILCQVVMKLMEQRGGTIDSRDLGRAL 1296 L+V VFVDGTWLYYSFF R R C + +KLG W +YKV WE +P I+ RAI QL+ Q+ R VEV RT VFSS R+DTD +S RM+MF M+ NF+VH++ T G+QEKCIDIALAV+M+HYAT+P Y D + DKDFMPAM RTR+KG+RV LCSMRNSCN+ALL AH MDF +W++++ D+L E + N + ++LC++V ++E+ G + SR LGR L Sbjct: 1 LQVQVFVDGTWLYYSFFARTTRNCEIRSKLGAYWYRDYKVLWERIPVIVGRAIQEQLQAQQQTDRFVEVYRTTVFSSLRQDTDPESLRMRMFTQMQRLNFDVHLSVTTGLQEKCIDIALAVDMLHYATVPGAYVHFQCDELPHIYRDKDFMPAMLRTREKGKRVGLCSMRNSCNRALLDPAAHTMDFGVIWLDDYFDELFE----KQRGRMENSPMPADMLCEMVAGILEKHGSAMSSRLLGREL 241
BLAST of mRNA_L-elsbetiae_contig620.14784.1 vs. uniprot
Match: A0A7S3WHV0_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WHV0_EMIHU) HSP 1 Score: 242 bits (618), Expect = 1.320e-71 Identity = 121/246 (49.19%), Postives = 166/246 (67.48%), Query Frame = 1 Query: 577 PLKVMVFVDGTWLYYSFFGRGERCHVSAKLGPGWVYEYKVKWEMLPTIISRAIHAQLEQLGQSSRLVEVVRTVVFSSARKDTDKDSNRMKMFNAMREKNFEVHMATTMGVQEKCIDIALAVEMMHYATIPDTYDVGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQALLRDDAHVMDFQPVWINEHLDDLMEYCPPAAGFGVNNVKVAPEI-LCQVVMKLMEQRGGTIDSRDLGRALNAISV 1311 PL+VMVFVDG+WLYYSF GR C V + G GW + V ++ LP +IS+ IH QL + + R VE+ RT+VF+S R DT + S RM MF M FEVH+ TT G+QEKCIDI+LAVEMMHYA+IP YD+ VL++GDKDF+PAM+R RQKG+ V LCSMRN C++ LL +AHV DF+P+W++++LD ++ P A + + + L +V+ + GG SR++GR L + +V Sbjct: 73 PLRVMVFVDGSWLYYSFHGRRPNCPVQQRYGDGWAFSNSVAFDRLPYLISQHIHQQLLRRYGTRRFVEITRTMVFTSYRADTHRRSLRMSMFRQMAAAGFEVHVRTTTGLQEKCIDISLAVEMMHYASIPGAYDIAVLISGDKDFIPAMSRIRQKGKSVALCSMRNCCSRDLLDPNAHVRDFEPIWLDDYLDLIVLPSPKAPSISPDAPRSPAGLALLRVLSAFLRANGGAARSREIGRFLRSSAV 318
BLAST of mRNA_L-elsbetiae_contig620.14784.1 vs. uniprot
Match: A0A0M0J6Q8_9EUKA (NYN domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J6Q8_9EUKA) HSP 1 Score: 229 bits (584), Expect = 2.010e-67 Identity = 107/222 (48.20%), Postives = 155/222 (69.82%), Query Frame = 1 Query: 589 MVFVDGTWLYYSFFGRGERCHVSAKLGPGWVYEYKVKWEMLPTIISRAIHAQLEQLGQSSRLVEVVRTVVFSSARKDTDKDSNRMKMFNAMREKNFEVHMATTMGVQEKCIDIALAVEMMHYATIPDTYDVGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQALLRDDAHVMDFQPVWINEHLDDLMEYCPPAAGFGVNNVKVAPEILCQVVMKLMEQ 1254 M+F+DG+WLYYS GR C V+ K G GW Y + + ++ LP +I++ +H ++ + ++ R VEVVR+V F+S R DTD S R ++F M + N++VH++TT+G QEKCIDIALAVEMMHYA++P YDV VLV+GDKDFMPA++R R KG+RV +CSMRN C+ LL AHV DF+P+W+++HLD L+ A G AP+ +++L+++ Sbjct: 1 MIFIDGSWLYYSLHGRRPNCPVTRKYGEGWEYSHSIDFDRLPQLIAQRLHKEMLERFKTQRFVEVVRSVAFASMRADTDVQSPRKRLFKGMEKANYDVHLSTTVGHQEKCIDIALAVEMMHYASLPGAYDVAVLVSGDKDFMPALSRIRTKGKRVAICSMRNCCSHDLLGPQAHVRDFEPIWLDDHLDYLIRPKADALAPG------APQSTASELLRLVKE 216
BLAST of mRNA_L-elsbetiae_contig620.14784.1 vs. uniprot
Match: A0A7S2R6D8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6D8_9STRA) HSP 1 Score: 231 bits (589), Expect = 6.820e-66 Identity = 114/246 (46.34%), Postives = 158/246 (64.23%), Query Frame = 1 Query: 577 PLKVMVFVDGTWLYYSFFGRGERCHVSAKLGPGWVYEYKVKWEMLPTIISRAIHAQLEQLGQSSRLVEVVRTVVFSSARKDTDKDSNRMKMFNAMREKNFEVHMATTMGVQEKCIDIALAVEMMHYATIPDTYDVGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQALLRDDAHVMDFQPVWINEHLDDLMEYCPPAAGFGVNNVKVAPEILCQVVMKLMEQRGGTIDSRDLGRALNAISVD 1314 PL+ M+FVDGTWLYY RG C ++ + G W + + W LP +I R+I +L + G S ++V+VV+TVVF+S RK+T S R++ F M+ +F+V+MATT G QEKC+DIALAVEMMHYA IP YD+ +LVTGD DF PAM R R++G+RV L + R CN A+++ H+ D+ PV++ HL E+ PA G + V V L VV++++E GG + SRDLGR L D Sbjct: 52 PLRTMIFVDGTWLYYCMHERGSSCPITFQFGDAWEQSHTIDWSRLPALIGRSIEEELVRRGGSRQVVDVVKTVVFTSVRKETGHQSKRVRFFQGMQAAHFDVNMATTPGPQEKCVDIALAVEMMHYAHIPGAYDLALLVTGDMDFAPAMQRVREQGKRVALVTFRQWCNAAMVQPGVHLSDYSPVFLENHLS---EFIFPAVG-STDRVGVTKHELVDVVVEILESEGGALSSRDLGRRLQVSMYD 293
BLAST of mRNA_L-elsbetiae_contig620.14784.1 vs. uniprot
Match: A0A7S3DSQ3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DSQ3_9STRA) HSP 1 Score: 223 bits (568), Expect = 8.650e-64 Identity = 117/251 (46.61%), Postives = 162/251 (64.54%), Query Frame = 1 Query: 574 VPLKVMVFVDGTWLYYSFFGRGERCHVSAKLGPGWVYEYKVKWEMLPTIISRAIHAQLEQLGQSS----RLVEVVRTVVFSSARKDTDKDSNRMKMFNAMREKNFEVHMATTMGVQEKCIDIALAVEMMHYATIPDTYDVGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQALLRDDAHVMDFQPVWINEHLDDLMEYCPPAAGFGVNNVKVAPEILCQVVMKLMEQRG-GTIDSRDLGRALNAISV 1311 VPLK M+FVDGTWLYYS FGR +RC + K G GW Y V + +LP +I + L LG SS R +++VR VF+S + DT S R +MF M+E N++V+ T+G EKC+DI LAVEM+HYATIP+ YD+ +L+TGDKDF+PA+ RTRQKGR+V L SMR+SCNQAL RD + D+ +W +HLDD++ P KV+ ++ +V+ ++ G + SRD+GR L ++V Sbjct: 245 VPLKAMLFVDGTWLYYSLFGREDRCPIQKKFGLGWPQRYDVDYSVLPKVICK----NLNDLGWSSMDTSRPIDIVRASVFTSYKADTPSTSLRYRMFEEMKEANYDVNQMETVGRGEKCVDIQLAVEMLHYATIPNAYDIAILLTGDKDFLPALVRTRQKGRKVALVSMRSSCNQAL-RDANGIKDYDVIWFEDHLDDIL--VPKPVAEQTLEEKVSVFLVAKVLRDFIKNSGFEMVSSRDVGRYLQCLNV 488
BLAST of mRNA_L-elsbetiae_contig620.14784.1 vs. uniprot
Match: L1K3W1_GUITC (NYN domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1K3W1_GUITC) HSP 1 Score: 218 bits (555), Expect = 1.370e-61 Identity = 115/255 (45.10%), Postives = 157/255 (61.57%), Query Frame = 1 Query: 574 VPLKVMVFVDGTWLYYSFFGRGE-RCHVSAKLGPGWVYEYKVKWEMLPTIISRAIHAQLEQLGQSSRLVEVVRTVVFSSARKDTDKDSNRMKMFNAMREKNFEVHMATTMGVQEKCIDIALAVEMMHYATIPDTYDVGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQALLRDDAHVMDFQPVWINEHLDDLMEYCPPAAGFGVNNVKVAPEILCQVVMKLMEQRGGTIDSRDLGRALNAISVDGGGATAL 1335 VP+KVM+F+DGTWL+YSFF RG+ RC K G W+ ++ + W L I + L R V+V+R +VF S R T S R++MF M NFEVH+ T G QEKC+DI+LAV+MMHYA++ D YD VL+TGDKDFMPAM+R +QKG+RV L SMRNSCN+ LL +HV DF+P++I++ +D + V + + L Q+V+ + GG RD+GR L A ++DG A L Sbjct: 124 VPIKVMIFIDGTWLFYSFFSRGQSRCPFIKKFGTNWIEDFSIDWAELQAFIRETLQRHLP-----GRFVDVMRVIVFGSVRSGTHPSSLRVRMFQEMDRSNFEVHLLTHTGGQEKCVDISLAVDMMHYASLQDGYDACVLMTGDKDFMPAMSRVKQKGKRVFLASMRNSCNRDLLDRSSHVYDFEPIFIDDAIDRIT--VRRKQKDSVIELGHIQQSLSQLVVNFLADNGGRQTMRDVGRHLQANTIDGSNALEL 371
BLAST of mRNA_L-elsbetiae_contig620.14784.1 vs. uniprot
Match: A0A7S1BIU1_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BIU1_9STRA) HSP 1 Score: 220 bits (560), Expect = 1.090e-60 Identity = 116/266 (43.61%), Postives = 170/266 (63.91%), Query Frame = 1 Query: 541 KESMEAAAKQ----SVPLKVMVFVDGTWLYYSFFGRG-ERCHVSAKLGPGWVYEYKVKWEMLPTIISRAIHAQLEQLGQSS-RLVEVVRTVVFSSARKDTDKDSNRMKMFNAMREKNFEVHMATTMGVQEKCIDIALAVEMMHYATIPDTYDVGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQALLRDDAHVMDFQPVWINEHLDDLMEYCPPAAGFGVNNVKVAPEILCQVVMK-LMEQRGGTIDSRDLGRALNAISVDG 1317 KE M++++ + + PLK M+F+DGTWLYYS + R +RC + G GW + + W LP +I++ + Q+ +L S+ R +E+VR VVF+S + TD+ S R+ MF M E N+EVH+ T G EKCIDI LAVEM+H+A D YDVG+L++GDKDFMPA+ RTRQKG+RV + SMR CN AL + HV DF+ VWI++ LD+L+ + ++ KVA + +V+ ++ GG + SRD+GR L + + G Sbjct: 174 KERMDSSSSELKLATTPLKAMLFIDGTWLYYSLYRREPDRCPIIQAYGLGWKHTHNFDWAALPRVIAQELERQMRELNWSTARPIEMVRAVVFTSYKATTDRLSRRITMFQEMAEANYEVHIMETTGTHEKCIDIQLAVEMVHFAGT-DAYDVGILLSGDKDFMPALVRTRQKGKRVGIVSMRRGCNSALRDPNMHVKDFEIVWIDDQLDELLVPIEISKTDTNSSAKVAAATMMKVMYDFIISSPGGRVSSRDIGRYLKGVEISG 438
BLAST of mRNA_L-elsbetiae_contig620.14784.1 vs. uniprot
Match: A0A7S1BHS6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BHS6_9STRA) HSP 1 Score: 220 bits (560), Expect = 1.260e-59 Identity = 116/266 (43.61%), Postives = 170/266 (63.91%), Query Frame = 1 Query: 541 KESMEAAAKQ----SVPLKVMVFVDGTWLYYSFFGRG-ERCHVSAKLGPGWVYEYKVKWEMLPTIISRAIHAQLEQLGQSS-RLVEVVRTVVFSSARKDTDKDSNRMKMFNAMREKNFEVHMATTMGVQEKCIDIALAVEMMHYATIPDTYDVGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQALLRDDAHVMDFQPVWINEHLDDLMEYCPPAAGFGVNNVKVAPEILCQVVMK-LMEQRGGTIDSRDLGRALNAISVDG 1317 KE M++++ + + PLK M+F+DGTWLYYS + R +RC + G GW + + W LP +I++ + Q+ +L S+ R +E+VR VVF+S + TD+ S R+ MF M E N+EVH+ T G EKCIDI LAVEM+H+A D YDVG+L++GDKDFMPA+ RTRQKG+RV + SMR CN AL + HV DF+ VWI++ LD+L+ + ++ KVA + +V+ ++ GG + SRD+GR L + + G Sbjct: 174 KERMDSSSSELKLATTPLKAMLFIDGTWLYYSLYRREPDRCPIIQAYGLGWKHTHNFDWAALPRVIAQELERQMRELNWSTARPIEMVRAVVFTSYKATTDRLSRRITMFQEMAEANYEVHIMETTGTHEKCIDIQLAVEMVHFAGT-DAYDVGILLSGDKDFMPALVRTRQKGKRVGIVSMRRGCNSALRDPNMHVKDFEIVWIDDQLDELLVPIEISKTDTNSSAKVAAATMMKVMYDFIISSPGGRVSSRDIGRYLKGVEISG 438
BLAST of mRNA_L-elsbetiae_contig620.14784.1 vs. uniprot
Match: R1DRX1_EMIHU (NYN domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DRX1_EMIHU) HSP 1 Score: 215 bits (547), Expect = 4.010e-59 Identity = 115/245 (46.94%), Postives = 151/245 (61.63%), Query Frame = 1 Query: 577 PLKVMVFVDGTWLYYSFFGRGERCHVSAKLGPGWVYEYKVKWEMLPTIISRAIHAQLEQLGQSSRLVEVVRTVVFSSARKDTDKDSNRMKMFNAMREKNFEVHMATTMGVQEKCIDIALAVEMMHYATIPDTYDVGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQALLRDDAHVMDFQPVWINEHLDDLMEYCPPAAGFGVNNVKVAPEILCQVVMKLMEQRGGTIDSRDLGRALNAISV 1311 PL+VMVFVDG+WLYYSF GR C V + G GW + V ++ LP +IS+ IH QL + + R VE+ RT+VF+S R DT + S RM MF M FEVH+ TT G+QEKCIDI+LAVEMMHYA+IP YD+ VL++GDKDF+PAM+R RQKG+ V LCSMRN C++ LL +AH P P + G+ L +V+ + GG SR++GR L + +V Sbjct: 62 PLRVMVFVDGSWLYYSFHGRRPNCPVQQRYGDGWAFSNSVAFDRLPYLISQHIHQQLLRRYGTRRFVEITRTMVFTSYRADTHRRSLRMSMFRQMAAAGFEVHVRTTTGLQEKCIDISLAVEMMHYASIPGAYDIAVLISGDKDFIPAMSRIRQKGKSVALCSMRNCCSRDLLDPNAHAPSISPD-------------APRSPAGL--------ALLRVLSAFLRANGGAARSREIGRFLRSSAV 285 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig620.14784.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig620.14784.1 >prot_L-elsbetiae_contig620.14784.1 ID=prot_L-elsbetiae_contig620.14784.1|Name=mRNA_L-elsbetiae_contig620.14784.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=458bp MVSSSDRQYRRRLRSWRCSLLGAGLSLGLLGTVDSFNPPLGGRLSPLPWLback to top mRNA from alignment at L-elsbetiae_contig620:67..8913- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig620.14784.1 ID=mRNA_L-elsbetiae_contig620.14784.1|Name=mRNA_L-elsbetiae_contig620.14784.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8847bp|location=Sequence derived from alignment at L-elsbetiae_contig620:67..8913- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig620:67..8913- >mRNA_L-elsbetiae_contig620.14784.1 ID=mRNA_L-elsbetiae_contig620.14784.1|Name=mRNA_L-elsbetiae_contig620.14784.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2748bp|location=Sequence derived from alignment at L-elsbetiae_contig620:67..8913- (Laminarionema elsbetiae ELsaHSoW15)back to top |