mRNA_L-elsbetiae_contig6196.14773.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6196.14773.1
Unique NamemRNA_L-elsbetiae_contig6196.14773.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig6196.14773.1 vs. uniprot
Match: A0A6H5JR72_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR72_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 2.130e-42
Identity = 94/145 (64.83%), Postives = 107/145 (73.79%), Query Frame = 1 
Query:  190 DDESPAQQG--PAAR--RVEPWGSLLL-SDQDQEEVDVQLAE---VDAVLVEGREEQERAILQDVTRTRSGTPALLDEKVRQWLQRSVSLFCRERGLQYAQGLTELAAPWALITDPPCLGSFSYRCFCSFVDRFAPNIFATAPEE 600
            DD SP  +   P +R   VEPW SLLL SD  +E  D ++ +   +   LV  REEQE AILQDV RTR+ +P   DEK RQWLQRSVSL+CRERGL+Y+QGLT LAAPWALITDPPCL  FSYRCF SFVDRFAPNIF+TA EE
Sbjct:   46 DDGSPVAEAECPPSRWVMVEPWSSLLLLSDHVREGRDDEILQDRKLAEALVGSREEQE-AILQDVPRTRTDSPVFGDEKARQWLQRSVSLYCRERGLKYSQGLTHLAAPWALITDPPCLNGFSYRCFRSFVDRFAPNIFSTAQEE 189
[Close]
BLAST of mRNA_L-elsbetiae_contig6196.14773.1 vs. uniprot
Match: D7FJC0_ECTSI (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJC0_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 3.130e-40
Identity = 76/96 (79.17%), Postives = 83/96 (86.46%), Query Frame = 1 
Query:  313 LVEGREEQERAILQDVTRTRSGTPALLDEKVRQWLQRSVSLFCRERGLQYAQGLTELAAPWALITDPPCLGSFSYRCFCSFVDRFAPNIFATAPEE 600
            LV  REEQ+ AILQDVTRTR+ +P   DEK RQWLQRSVSL+CRERGL+Y+QGLT LAAPWALITDPPCL  FSYRCF SFVDRFAPNIF+TA EE
Sbjct:   42 LVGSREEQQ-AILQDVTRTRTDSPVFGDEKARQWLQRSVSLYCRERGLRYSQGLTHLAAPWALITDPPCLDGFSYRCFRSFVDRFAPNIFSTAQEE 136
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6196.14773.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JR72_9PHAE2.130e-4264.83Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
D7FJC0_ECTSI3.130e-4079.17Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6196contigL-elsbetiae_contig6196:2210..8289 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score154.1
Seed ortholog evalue6.9e-35
Seed eggNOG ortholog2880.D7FJC0
Preferred nameTBC1D23
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0001667,GO:0001817,GO:0001819,GO:0002064,GO:0002065,GO:0002066,GO:0003006,GO:0003674,GO:0005096,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005802,GO:0006810,GO:0006928,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007297,GO:0007298,GO:0007399,GO:0007417,GO:0007420,GO:0008047,GO:0008150,GO:0009790,GO:0009888,GO:0009987,GO:0010631,GO:0012505,GO:0016043,GO:0016192,GO:0016197,GO:0016477,GO:0016482,GO:0019953,GO:0022008,GO:0022412,GO:0022414,GO:0030030,GO:0030154,GO:0030182,GO:0030234,GO:0030695,GO:0030707,GO:0030855,GO:0031175,GO:0031347,GO:0031984,GO:0032101,GO:0032501,GO:0032502,GO:0032504,GO:0032675,GO:0032680,GO:0032755,GO:0040011,GO:0042147,GO:0043085,GO:0043087,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043547,GO:0044093,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0046907,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048568,GO:0048583,GO:0048609,GO:0048666,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0050727,GO:0050789,GO:0050790,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051336,GO:0051345,GO:0051641,GO:0051649,GO:0051674,GO:0051704,GO:0060322,GO:0060429,GO:0060589,GO:0065007,GO:0065009,GO:0071840,GO:0080134,GO:0090130,GO:0090132,GO:0098772,GO:0098791,GO:0120036,GO:1903555,GO:1990403
EggNOG free text desc.embryonic brain development
EggNOG OGsKOG3636@1,KOG3636@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size607
Cds size585
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6196.14773.1prot_L-elsbetiae_contig6196.14773.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6196 2231..8289 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816679.1355662-UTR-L-elsbetiae_contig6196:2209..22301622816679.1355662-UTR-L-elsbetiae_contig6196:2209..2230Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6196 2210..2230 +
1691683734.0812006-UTR-L-elsbetiae_contig6196:2209..22301691683734.0812006-UTR-L-elsbetiae_contig6196:2209..2230Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6196 2210..2230 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816679.1500113-CDS-L-elsbetiae_contig6196:2230..25001622816679.1500113-CDS-L-elsbetiae_contig6196:2230..2500Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6196 2231..2500 +
1691683734.0930228-CDS-L-elsbetiae_contig6196:2230..25001691683734.0930228-CDS-L-elsbetiae_contig6196:2230..2500Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6196 2231..2500 +
1622816679.1628284-CDS-L-elsbetiae_contig6196:3092..31551622816679.1628284-CDS-L-elsbetiae_contig6196:3092..3155Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6196 3093..3155 +
1691683734.1024902-CDS-L-elsbetiae_contig6196:3092..31551691683734.1024902-CDS-L-elsbetiae_contig6196:3092..3155Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6196 3093..3155 +
1622816679.1801465-CDS-L-elsbetiae_contig6196:6409..65231622816679.1801465-CDS-L-elsbetiae_contig6196:6409..6523Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6196 6410..6523 +
1691683734.1123385-CDS-L-elsbetiae_contig6196:6409..65231691683734.1123385-CDS-L-elsbetiae_contig6196:6409..6523Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6196 6410..6523 +
1622816679.1906168-CDS-L-elsbetiae_contig6196:7612..76831622816679.1906168-CDS-L-elsbetiae_contig6196:7612..7683Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6196 7613..7683 +
1691683734.126565-CDS-L-elsbetiae_contig6196:7612..76831691683734.126565-CDS-L-elsbetiae_contig6196:7612..7683Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6196 7613..7683 +
1622816679.2010412-CDS-L-elsbetiae_contig6196:8222..82891622816679.2010412-CDS-L-elsbetiae_contig6196:8222..8289Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6196 8223..8289 +
1691683734.1361816-CDS-L-elsbetiae_contig6196:8222..82891691683734.1361816-CDS-L-elsbetiae_contig6196:8222..8289Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6196 8223..8289 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6196.14773.1

>prot_L-elsbetiae_contig6196.14773.1 ID=prot_L-elsbetiae_contig6196.14773.1|Name=mRNA_L-elsbetiae_contig6196.14773.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=195bp
MLSERPAPYSSTNGRDEALGAPLDAHGVMLLPPPGDGGLHGKASAAVGGR
VPMELRDDESPAQQGPAARRVEPWGSLLLSDQDQEEVDVQLAEVDAVLVE
GREEQERAILQDVTRTRSGTPALLDEKVRQWLQRSVSLFCRERGLQYAQG
LTELAAPWALITDPPCLGSFSYRCFCSFVDRFAPNIFATAPEEGA
back to top

mRNA from alignment at L-elsbetiae_contig6196:2210..8289+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6196.14773.1 ID=mRNA_L-elsbetiae_contig6196.14773.1|Name=mRNA_L-elsbetiae_contig6196.14773.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6080bp|location=Sequence derived from alignment at L-elsbetiae_contig6196:2210..8289+ (Laminarionema elsbetiae ELsaHSoW15)
AAGTAATCAGTGCCGTGCGCGATGCTGAGCGAGAGACCAGCACCATACTC
CTCTACAAACGGGAGAGACGAAGCACTAGGTGCCCCGTTGGACGCGCACG
GGGTGATGCTGCTACCGCCACCGGGTGATGGTGGCTTGCATGGGAAGGCC
TCTGCTGCTGTCGGCGGGAGAGTACCGATGGAGCTACGAGACGATGAGTC
CCCTGCACAGCAGGGGCCTGCTGCTCGAAGGGTGGAGCCTTGGGGATCGC
TGCTCCTGAGCGACCAAGACCAGGAAGAGGTTGATGTCCAGGTAGGGAGG
GAACAACTCGCCTTTCTATCTCCATCATGTGGTCGAACAGCACCCTCTAT
CTCTCTCGTTATACTCTCGGACCACTTTTCCACTTTTTCTTCTGAGAAGG
TATGTATGTAGATATGCGTCCATACGTGCAAGGGGAAGGTCAACGTGCAA
CGTAGCCAACGGCGCTGTTGCCCTTGTGGGTAATCCTCTCGGCGCCGAGA
TCGTGAAGGTGATGCAGAGGTCCACACGGCTGCACGCATATATGTATGTA
GGTGTAAACGCCCCTCCCTACTATCTAGGTACATAATCCTGCAGCCGCCT
GATTTCTGCGCACCACCATCAATCAGACTTCAACCTTCACACTCCTGTTG
TGCGCGATGCCAAATGAAATGGCATACACGCCCATGCAGCACCTCTTATC
TCTGCAGATTTCTTCGCTCTGTGCGCGAAAAAAAGAAAAAGTGATGCCTG
CCTCTTTGTTTTGTTCTCAACGCGGGGGGGCGCGGAGGAATTGATCACTA
CCTGGTACTTGTTTTCTTCCCCCTTGTTCGATCCTTCGTCCTTCGATCCT
TCGATACACATCTCCATGATCCGTGATTTCAAGCTAGCAGAGGTAGATGC
GGTGCTGGTCGAAGGCCGGGAAGAACAAGAGCGGGCCATTCTCCAGGTAT
GATTTGTTGTTAATCTGCCGCACTAATCCGTCTTGTGCGTGGTGTGGTGT
TTACAAACGGCTACCACTTTTTCACTTACGTCCACGTTACCACTTTGACC
CCCTCAGACAACGCAGGGCGCCCACACACCTATCGCCTGCTCTATAATTA
GCGTTAGATCGATCCCCGCATATGTTTATGTACATGCACATGCTCGGTGT
AGATGCATATTTAGACTACCGTAGGTGACACAAGGTACCACACCCCCTGG
ACAGATTTTCAAAGCTCGATTCCTCCCCAGCAATAAGAGCGCCAGTGTCG
AAAAGGGAGGGTGGCGTTGGAAAGATCTAGTCGAGGGCTGTCCGAAAGTG
TGTCGTTTGGTGCCGGCACCCTCTTCGTTACGGAGTAATGGAGCTCCAAA
ATTCGGTCCAGGGGGTGTGGTATCTTGCGTCATAGTAATATACGGTATGA
GGTACCCAGGTACCTACCAAAAATAGCAGGTGGCCCGGCGCCGCGTACCA
TCCCATCCGGGATGGAGAGCCCGCCACAGACGGGAAAATGTATAGGTTTC
CCATCACACGTGGAATGGGATGGTGTTTGCCCCCACTTCTGATGGTATTA
CGATGGGATGGGATGGTATCGTACGTTGTCGTGACAGGATTTTTTTTTTT
TTTCTTCACGTTTATTTCCAGTGCTCGATGGGCTCCCTGTCACGAAGACA
TCTTGCCAGAGTACTGAACCGTGGTCACACAGGAGGGTTCCTTTCCCCAA
GGCCCCCACTCCCGCCGTCTGCGGTGCTTGCCTAGGATTTTTGTCGCGAG
AAGGGTTCAGCCGTCCCTTTTTCCCTCGTCGACGGTGAGGTCGAAGTTGG
GATGGTATAAGGGCAATGGGATGGGATGGTATGGTAACTGGTGATTTCAC
GTGATGGGATGGGATGGTAACTGGTGGGACGGTAAGTGTGATGGGATGTG
GGAGCTTTTGCCTTGGCGTGGCGGCGAGAAGATAGCAACACCAAGGAGCC
TGGTACACAGAGGTATGGTATTACCAGTGTTCCCATTAAGTACCCTCCCG
CTTGCATATACATACGTACACATAAATAAACAGACGGGAAAAAAAACACA
AAAGCACAAACAGCAGTACCCTAACCCTAACCCTAACCCTAATCACAGAC
CCCCCAAACATTCCCCGATTCCATACTTTATCCCATATGTTTCGCCGACC
AATAAACCTGCGTAGACTACCTTTAGAACTCAACAAACTGCAGGCACAAC
TAATTCCAGCCGAAGTTCTACTGCTTCTGTTGTTGAAGCTCTGGCCACAA
TACGCTACGCACCAAAAACCAAAAACTGCAAAACACACAAAACAAAAACT
GGCACTTGTTTGGTGACAGTTTTACCCTCCCTAGCTTGCTGGGCGGCGAC
TGCCCGCTTTGCGTTTGTAACGTGCTTTGCCTCAAATACGGTCAGCTATT
GTTTTACTTTCGCAAAGCCCGGAATGAGGCGCCTGTTGAGCCTGAGCAGA
ACAGCATCTAGCCCGCATGACCTGCTCGAGGGCGGAAAAGTTCTTCTCCG
ATTGACAATCACACATTGTCTGTCCTTTAAAGATCCCCCTTCATAGCGAG
CTCATGAGGGCACAGCGGCAGGGGGTGATGCAAGACCAAAGCAAACAGAT
AAAGGCAGCGGAAGTACTCCTAGATTTACAACTGAAAAACACAGCAGCTG
CTACTGTGTAAACAAACAACTGCTTATTTTCTGTGCTGACGCTCCCTTGA
ACCAAACAGGGCTGCTGTGCCGGTCTGTGCTCATCAGGTGCAAAAGCTGT
CCAGTCTCCTGGCATGTGCTGCCATGCTCAAAACAGCTGCTGTCATACTA
ACGTTTTTTTGGGCTATTGGAAGCCGACAGCCCACTAGATTCAGAATCGG
AACAGTTCCCAGACCATTTTGTATATAGTCATACACACCGCTCCCTCAGA
AAGTACGTTGAACTGGGTGGGGGGTGCCCGATGTTCAGGGTGGGATACGT
GGTAAATCTCTGCAGAGAGAAATGGGTGGTATCGATGGGTTTTTGGTGGG
ATGGTGGTAACTTCAGTAGCTGTGATGGTGAATTAGGTAGGATGGGAAGC
TTTCAAAGACCACCACCTCTTTACTGCTGGTGTCCCCGACTGGCGTGGTG
GTGACGTGGTGGTATCTGGTGGTTGGACCATAATGCAGTCGTTTTTCCCA
TCCCATCCCATTACCATCCCATCAAATGATGGTTTCCCATCCCATCACAT
CACCCCGTACCACCCTGGTACATAGCACACATACGTAGCAGTAGCAGCGC
CGCCTTAAACAACATTACTGCCATAGACTATCTAGATATATATCGAGGGC
TCAGGCGCTCCTAAAGCAAACAAGCGCTACAATACGGTAATCATGATCTA
AACCTACTTGTTTTTGCTTTTGCTCTATTATTGTTAGGGAACGTTATTTC
AGGTCTAGACATTCCTCTGCGCTAGAACTAATGGCTACGTTTCTAAATAA
TAGACTATACTTCACAGCAGCAGTGTATATATGGTAGCATTCCAAAAATG
GAGGGGGAATTTAGACGAGGCTGGGCTACCCCAGGTGATTTATACAAGTA
GCCTCATCCAAAATTACAAAATTGCGACTGATCATTTTTGTTTTTTTTTT
CTTCACATTTATTTCTAGTGCTCGAGGGGCTCCCTGTCACGAGGACATCT
TGCCAGAGTACTGAACCATGGTCACACAGAAGGGTTCCTTTCCCCAAGGC
CCCCACTCCCCCCCGTCTGCGATGCTTGCCTTAAGATTTTTGTCGCGAGA
AGGGTTCAGCCGTCCCTTTCCCTTGGGCTAAAAATGTATACAAAACAAAT
ATATGCAAATTTGCTCAAGGGTACCTACCCTGTAGGTAACCTACCACCTG
GATTTGTTGTACGTAGTTACGTAGCTGATTGGTCAAAAAACCTGCGGCGG
AATTTCGAAAACAGGCACGACGGAAGATCCTCGGGTGATGGGTGGCGTCA
TCCACGGTCGATTTACCCCCCCAGACGGCCGAAATCTTGGGGGAAATAAG
TCGATTTCGATTGCTCAAGAGATCTCTACAAAATAGTAGCCTTGTAACGC
GCGTTTAGCTTACCTTCTATATATCTCTCTCCCCCCCCCTCTCTCTCTCT
CTCTCTCTCTCTGTGCGTGTGCGTGTGCCTCGCCCTCTCTCCCTCGTGCG
GTGCACTGCTGACCGGAACCACTGGCTTGGGGGGGGGGGGGGTCCAACAG
GACGTGACCCGGACCCGATCAGGCACGCCCGCTCTCTTGGACGAAAAGGT
CCGGCAGTGGCTCCAGCGGAGCGTTTCCCTCTTCTGCCGGGAGCGAGGCT
TGCAGTACGCCCAGGTCCGTCATCAGCCATGTTTTTTGTTTTTTTTCAGT
TCTTGCTCTTCAGAACCCGCACTGATTTCTGGAGTGGTTTTCATGGACTC
TACAGCACCAGTGTTGTACTACATAGTAGTAGTTTCAAGGGGTTTCGCTC
CTTGCGGCGTTTCTAAGTTTTTTGCATGTTTTTGTCGACACAACAACGGC
GGTGTGTGCGGGGGGGGGCGTGTGTACGCAGCAGCAGTGCCATCCCTCCA
AGCGCGAAGGAAATCTCAAGCCCGCTGTTTTGTATACAGTAAGTAGTACA
AGCAGCATACCGGCCCGCTAGTAAGAAAGCTCCGAGGAAGAAACTTAGCC
TGAGATCTTCACATTATGAAGAGAGTGTCCAGCCTGGGCGGCGAGTGCCT
CACTAAACCCTATATATACATTATGAAAAAAAGTGTTATGCTCGACTTCC
AACCCAACAAGAAAGAAGCATCACGGTGGGCTCTACCCGCCGGAAAATTG
TTGGCCGACCTCGCAAATCTAAATCTTTGCAGGGGAGATGTTGAATTCTT
CTGATATTTAGGTTGTTTTTCTGCTCGCTTCGCCAAATATTACGTCTCTG
TATGGAATACCGTTTGAACCCCATATCGAGTCTTTGCTCTAGTGTGGGGT
AGGTTCCATCTTTGATTCTTTGTTTATTTTGAAAGAAGACTTCCAACCCA
ACAAAAAAGAAGACTTACAACCCAGCAAGTCAGCCCGCTGGGCCTGATTT
CAGGTTTCTTAGCAGCGGGTTGGTACAATGGTTGGTACAATACTGCTGTA
GTCCCCCGCTTTCTTAGGGGGCAAAAGAAGAGGGCCTGGGTCTGTCTGAC
CTCTCTCTCGCTGAAATCGTTGTTTTTGTTTGTTTTTTCTTAAACTACGG
AGGATTTATTTTTTGGGGTCTGATCTCGCTGAAGTCGTTATTATCGTTTT
TTTAATTAATGTATACGAATGTCAGCAGTCTACGTCCAGTTTGTTTTTTT
ATATAGGTATTTTACATGTTTTTATTTGTTTTTTTATTTAGGGCCTGACC
TCGCTAAATGCTGTTGTATTTTAATTCATTAATTAATTGATTTCTCCATG
AAGGGTCTGACGGAGCTGGCGGCACCGTGGGCGCTCATCACCGACCCTCC
CTGCCTCGGCAGCTTCAGCTACAGGTGGGACTGTTTCTTCTCTGCTGGCC
CTCCCTTTTGGGTGCGCCCAGTGGGCTTGTGGGTTGCAATATCTCACACT
TATGCCAACAAACTGACTTAGGCCGAAATCGGAGGAGGGGTGGGGGGGGT
ATACTAATTCCCATATATTTGTTTTTTTTGGGGGGGGGCGGCAGCCTAGA
TTCTTAAGGGGGCGCGGTTATGCGGGTATCCCTCAACGGACCCCCCCCCC
ATACTATTTTCTATATATTTTACCAAACTGGACTAAGCCAAAAAACACGG
CAGGAAGCCTATTCCGGAATGGGGAATGGGGGTTCTCTGTGTCCGCTTCT
ACATATAGACGCGGTATTTGCCAGTGCGCCTTGCGCGCAAGAAGGGACTC
TGCGCCCACAGAAGTCAAACACTTGTTTGAAGAACAACCGTCCACGCACC
GACTCCTAGCCCTCTTCCCTGCTCTTGAACCGCCCGCCCCCCGTGTTCCC
CTCGCCCCGCGTGTACTCGCCCCCCCTCCCCCCCCCCGCCCCGCCCCGAC
CTCTCTGCCGAAGGTGTTTCTGTTCCTTCGTTGACCGGTTCGCGCCGAAC
ATTTTCGCGACGGCTCCCGAGGAAGGCGCT
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig6196:2210..8289+

>mRNA_L-elsbetiae_contig6196.14773.1 ID=mRNA_L-elsbetiae_contig6196.14773.1|Name=mRNA_L-elsbetiae_contig6196.14773.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1170bp|location=Sequence derived from alignment at L-elsbetiae_contig6196:2210..8289+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCTGAGCGAGAGACCAGCACCATACTCCTCTACAAACGGGAGAGACGA
AGCACTAGGTGCCCCGTTGGACGCGCACGGGGTGATGCTGCTACCGCCAC
CGGGTGATGGTGGCTTGCATGGGAAGGCCTCTGCTGCTGTCGGCGGGAGA
GTACCGATGGAGCTACGAGACGATGAGTCCCCTGCACAGCAGGGGCCTGC
TGCTCGAAGGGTGGAGCCTTGGGGATCGCTGCTCCTGAGCGACCAAGACC
AGGAAGAGGTTGATGTCCAGATGCTGAGCGAGAGACCAGCACCATACTCC
TCTACAAACGGGAGAGACGAAGCACTAGGTGCCCCGTTGGACGCGCACGG
GGTGATGCTGCTACCGCCACCGGGTGATGGTGGCTTGCATGGGAAGGCCT
CTGCTGCTGTCGGCGGGAGAGTACCGATGGAGCTACGAGACGATGAGTCC
CCTGCACAGCAGGGGCCTGCTGCTCGAAGGGTGGAGCCTTGGGGATCGCT
GCTCCTGAGCGACCAAGACCAGGAAGAGGTTGATGTCCAGCTAGCAGAGG
TAGATGCGGTGCTGGTCGAAGGCCGGGAAGAACAAGAGCGGGCCATTCTC
CAGCTAGCAGAGGTAGATGCGGTGCTGGTCGAAGGCCGGGAAGAACAAGA
GCGGGCCATTCTCCAGGACGTGACCCGGACCCGATCAGGCACGCCCGCTC
TCTTGGACGAAAAGGTCCGGCAGTGGCTCCAGCGGAGCGTTTCCCTCTTC
TGCCGGGAGCGAGGCTTGCAGTACGCCCAGGACGTGACCCGGACCCGATC
AGGCACGCCCGCTCTCTTGGACGAAAAGGTCCGGCAGTGGCTCCAGCGGA
GCGTTTCCCTCTTCTGCCGGGAGCGAGGCTTGCAGTACGCCCAGGGTCTG
ACGGAGCTGGCGGCACCGTGGGCGCTCATCACCGACCCTCCCTGCCTCGG
CAGCTTCAGCTACAGGGTCTGACGGAGCTGGCGGCACCGTGGGCGCTCAT
CACCGACCCTCCCTGCCTCGGCAGCTTCAGCTACAGGTGTTTCTGTTCCT
TCGTTGACCGGTTCGCGCCGAACATTTTCGCGACGGCTCCCGAGGAAGGC
GCTGTGTTTCTGTTCCTTCGTTGACCGGTTCGCGCCGAACATTTTCGCGA
CGGCTCCCGAGGAAGGCGCT
back to top