mRNA_L-elsbetiae_contig6190.14770.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6190.14770.1 vs. uniprot
Match: D7G4W6_ECTSI (Acireductone dioxygenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4W6_ECTSI) HSP 1 Score: 213 bits (543), Expect = 5.020e-65 Identity = 99/110 (90.00%), Postives = 106/110 (96.36%), Query Frame = 1 Query: 568 GVLHWQLDADEHESDPALDKIRADRGYSYQDIITVSPDKLANYEDKIKSFFEEHMHTDEEIRYVLEGSGYFDVRAKDERWVRIKMGKGDMITLPAGMYHRFTLDDSNYIK 897 GVLHW+LDAD+H DPAL+KIR DRGYSYQDIITVSPDKLANYEDKIKSFFEEHMH+DEEIRY+LEGSGYFDVRAKDERWVRIKM KGDMITLPAG+YHRFTLDD+NYIK Sbjct: 37 GVLHWELDADKHADDPALEKIRQDRGYSYQDIITVSPDKLANYEDKIKSFFEEHMHSDEEIRYILEGSGYFDVRAKDERWVRIKMSKGDMITLPAGIYHRFTLDDTNYIK 146
BLAST of mRNA_L-elsbetiae_contig6190.14770.1 vs. uniprot
Match: A0A5J4XYY7_9CHLO (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (Fragment) n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XYY7_9CHLO) HSP 1 Score: 181 bits (459), Expect = 9.400e-53 Identity = 80/110 (72.73%), Postives = 93/110 (84.55%), Query Frame = 1 Query: 568 GVLHWQLDADEHESDPALDKIRADRGYSYQDIITVSPDKLANYEDKIKSFFEEHMHTDEEIRYVLEGSGYFDVRAKDERWVRIKMGKGDMITLPAGMYHRFTLDDSNYIK 897 GVL WQLDAD HE+DP L IR DR YSYQD+IT+ PD L NYE+K+KSFFEEH+HTDEEIRY+LEGSGYFDVR K +RW+RI + KGDMI LP G+YHRFTLD+ NY+K Sbjct: 16 GVLSWQLDADNHENDPTLKAIRTDRNYSYQDVITIRPDTLPNYEEKLKSFFEEHLHTDEEIRYILEGSGYFDVRDKQDRWIRIALNKGDMIVLPEGIYHRFTLDEVNYVK 125
BLAST of mRNA_L-elsbetiae_contig6190.14770.1 vs. uniprot
Match: A0A0U9HMK5_KLENI (Acireductone dioxygenase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HMK5_KLENI) HSP 1 Score: 179 bits (455), Expect = 2.080e-51 Identity = 82/110 (74.55%), Postives = 97/110 (88.18%), Query Frame = 1 Query: 568 GVLHWQLDADEHESDPALDKIRADRGYSYQDIITVSPDKLANYEDKIKSFFEEHMHTDEEIRYVLEGSGYFDVRAKDERWVRIKMGKGDMITLPAGMYHRFTLDDSNYIK 897 GV+HW LDAD++E+DP L +IR DR YSYQD+ITVSPDKL NYE KIKSFFEEH+HTDEEIRY L+GSGYFDVR +++W+RI + KGDMI LPAGMYHRFTLD++NYIK Sbjct: 67 GVVHWVLDADKYETDPELQQIRKDRNYSYQDLITVSPDKLPNYEVKIKSFFEEHIHTDEEIRYCLDGSGYFDVRDANDKWIRILVRKGDMIVLPAGMYHRFTLDENNYIK 176
BLAST of mRNA_L-elsbetiae_contig6190.14770.1 vs. uniprot
Match: A0A7S2CLX2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CLX2_9STRA) HSP 1 Score: 179 bits (455), Expect = 3.180e-51 Identity = 79/110 (71.82%), Postives = 95/110 (86.36%), Query Frame = 1 Query: 568 GVLHWQLDADEHESDPALDKIRADRGYSYQDIITVSPDKLANYEDKIKSFFEEHMHTDEEIRYVLEGSGYFDVRAKDERWVRIKMGKGDMITLPAGMYHRFTLDDSNYIK 897 GV+HW+LDAD HE+DP L+KI+ADRGY+Y D+I VSPDKL YE KIK+FF+EH+HTDEEIRY+L+G GYFDVR KD+ W+RI M KGDMITLPAG+YHRFT+D NY K Sbjct: 1 GVIHWKLDADAHENDPHLEKIKADRGYTYTDVICVSPDKLPGYETKIKTFFQEHLHTDEEIRYILDGGGYFDVRDKDDAWIRIAMRKGDMITLPAGIYHRFTMDTRNYTK 110
BLAST of mRNA_L-elsbetiae_contig6190.14770.1 vs. uniprot
Match: A0A836CI35_9STRA (Acireductone dioxygenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI35_9STRA) HSP 1 Score: 177 bits (450), Expect = 5.050e-51 Identity = 81/110 (73.64%), Postives = 94/110 (85.45%), Query Frame = 1 Query: 568 GVLHWQLDADEHESDPALDKIRADRGYSYQDIITVSPDKLANYEDKIKSFFEEHMHTDEEIRYVLEGSGYFDVRAKDERWVRIKMGKGDMITLPAGMYHRFTLDDSNYIK 897 GVLHW LDAD HE+DPAL IRA+RGY+Y DIITVS D L NYE KI+SF+EEHMHTDEEIRY+L+G+GYFDVR +RW+R+ MGKGDMI LPAG+YHRFTLD +NY K Sbjct: 37 GVLHWHLDADNHETDPALAAIRAERGYTYSDIITVSADTLPNYEAKIRSFYEEHMHTDEEIRYLLDGTGYFDVRDARDRWIRVAMGKGDMIVLPAGIYHRFTLDANNYTK 146
BLAST of mRNA_L-elsbetiae_contig6190.14770.1 vs. uniprot
Match: MTND_BOVIN (Acireductone dioxygenase n=13 Tax=Pecora TaxID=35500 RepID=MTND_BOVIN) HSP 1 Score: 177 bits (448), Expect = 7.120e-51 Identity = 78/110 (70.91%), Postives = 98/110 (89.09%), Query Frame = 1 Query: 568 GVLHWQLDADEHESDPALDKIRADRGYSYQDIITVSPDKLANYEDKIKSFFEEHMHTDEEIRYVLEGSGYFDVRAKDERWVRIKMGKGDMITLPAGMYHRFTLDDSNYIK 897 GVL+W+LDAD++E+DP L+KIR +R YS+ DIIT+S DKL NYE+KIK FFEEH+H DEEIRY+L+GSGYFDVR +++RW+RI M KGDMITLPAG+YHRFTLD+ NY+K Sbjct: 35 GVLYWKLDADKYENDPELEKIRKERNYSWVDIITISKDKLPNYEEKIKMFFEEHLHLDEEIRYILDGSGYFDVRDQEDRWIRISMEKGDMITLPAGIYHRFTLDEKNYVK 144
BLAST of mRNA_L-elsbetiae_contig6190.14770.1 vs. uniprot
Match: UPI0018649841 (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI0018649841) HSP 1 Score: 175 bits (444), Expect = 2.570e-50 Identity = 77/110 (70.00%), Postives = 93/110 (84.55%), Query Frame = 1 Query: 568 GVLHWQLDADEHESDPALDKIRADRGYSYQDIITVSPDKLANYEDKIKSFFEEHMHTDEEIRYVLEGSGYFDVRAKDERWVRIKMGKGDMITLPAGMYHRFTLDDSNYIK 897 GV HW+L+AD HE+DP L KIR +RGYSY DIIT+ PDKL +YE+K+K FFEEH+H D+EIRY+LEG YFDVR KD++W+RI M KGDMITLPAG+YHRFTLD +NY K Sbjct: 34 GVFHWKLNADIHETDPELQKIREERGYSYMDIITIHPDKLPSYEEKLKMFFEEHLHLDDEIRYILEGRAYFDVRDKDDKWIRIAMSKGDMITLPAGIYHRFTLDQTNYTK 143
BLAST of mRNA_L-elsbetiae_contig6190.14770.1 vs. uniprot
Match: A0A151N7Y2_ALLMI (Acireductone dioxygenase n=4 Tax=Crocodylia TaxID=1294634 RepID=A0A151N7Y2_ALLMI) HSP 1 Score: 175 bits (444), Expect = 2.910e-50 Identity = 78/110 (70.91%), Postives = 96/110 (87.27%), Query Frame = 1 Query: 568 GVLHWQLDADEHESDPALDKIRADRGYSYQDIITVSPDKLANYEDKIKSFFEEHMHTDEEIRYVLEGSGYFDVRAKDERWVRIKMGKGDMITLPAGMYHRFTLDDSNYIK 897 GVL+W+LDAD +E+DP L +IR +R YS+ DIIT+ DKL NYEDKIK F+EEH+H DEEIRY+LEGSGYFDVR KD++W+RI M KGDMITLPAG+YHRFTLD++NY+K Sbjct: 35 GVLYWKLDADNYETDPELARIRRERNYSWMDIITIDKDKLPNYEDKIKIFYEEHLHLDEEIRYILEGSGYFDVRDKDDKWIRIFMQKGDMITLPAGIYHRFTLDENNYVK 144
BLAST of mRNA_L-elsbetiae_contig6190.14770.1 vs. uniprot
Match: A9NPM8_PICSI (Acireductone dioxygenase n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NPM8_PICSI) HSP 1 Score: 175 bits (444), Expect = 3.400e-50 Identity = 79/110 (71.82%), Postives = 96/110 (87.27%), Query Frame = 1 Query: 568 GVLHWQLDADEHESDPALDKIRADRGYSYQDIITVSPDKLANYEDKIKSFFEEHMHTDEEIRYVLEGSGYFDVRAKDERWVRIKMGKGDMITLPAGMYHRFTLDDSNYIK 897 GVL+W LDAD++E+DP L +IR +RGY+Y D+IT SPDKL NYEDK+KSFFEEH+HTDEEIR+ LEGSGYFDVR D++W+R+ + KGDMI LPAG+YHRFTLD SNYIK Sbjct: 34 GVLYWHLDADKYETDPDLQQIRENRGYTYTDMITCSPDKLPNYEDKLKSFFEEHIHTDEEIRFCLEGSGYFDVRDGDDKWIRVWLKKGDMIVLPAGIYHRFTLDTSNYIK 143
BLAST of mRNA_L-elsbetiae_contig6190.14770.1 vs. uniprot
Match: D8SIG5_SELML (Acireductone dioxygenase n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SIG5_SELML) HSP 1 Score: 175 bits (443), Expect = 4.950e-50 Identity = 79/110 (71.82%), Postives = 94/110 (85.45%), Query Frame = 1 Query: 568 GVLHWQLDADEHESDPALDKIRADRGYSYQDIITVSPDKLANYEDKIKSFFEEHMHTDEEIRYVLEGSGYFDVRAKDERWVRIKMGKGDMITLPAGMYHRFTLDDSNYIK 897 GVLHW ++ADE+E+DP L K+R +RGY Y+D ITVSPDKL NYE KIK+F+EEH+HTDEEIRY L+GSGYFDVR D+RW+RI + KGDMI LPAG YHRFT D+SNYIK Sbjct: 34 GVLHWVMNADEYETDPQLKKLREERGYDYEDFITVSPDKLPNYEHKIKTFYEEHIHTDEEIRYCLDGSGYFDVRDSDDRWIRIWVEKGDMIVLPAGSYHRFTNDESNYIK 143 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6190.14770.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6190.14770.1 >prot_L-elsbetiae_contig6190.14770.1 ID=prot_L-elsbetiae_contig6190.14770.1|Name=mRNA_L-elsbetiae_contig6190.14770.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=74bp MHTDEEIRYVLEGSGYFDVRAKDERWVRIKMGKGDMITLPAGMYHRFTLDback to top mRNA from alignment at L-elsbetiae_contig6190:4054..9852+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6190.14770.1 ID=mRNA_L-elsbetiae_contig6190.14770.1|Name=mRNA_L-elsbetiae_contig6190.14770.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5799bp|location=Sequence derived from alignment at L-elsbetiae_contig6190:4054..9852+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6190:4054..9852+ >mRNA_L-elsbetiae_contig6190.14770.1 ID=mRNA_L-elsbetiae_contig6190.14770.1|Name=mRNA_L-elsbetiae_contig6190.14770.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=444bp|location=Sequence derived from alignment at L-elsbetiae_contig6190:4054..9852+ (Laminarionema elsbetiae ELsaHSoW15)back to top |