mRNA_L-elsbetiae_contig6188.14766.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6188.14766.1 vs. uniprot
Match: D8LNG2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG2_ECTSI) HSP 1 Score: 260 bits (664), Expect = 8.260e-81 Identity = 120/148 (81.08%), Postives = 133/148 (89.86%), Query Frame = 1 Query: 1 LKSAPSYVVSALMQDAYDDGCDYFYQINDDTLINTVGWAEVFTGELRNNPLGRNVGVTGPADTNNRRILTHAFVHRTHMDVFGRFFPISFRNWWSDDWISNVYGREHTLRDHSMTITHDVKSQKSADPYRYQIDYTAELSLRDELRKG 444 ++ APSYVVSALMQDAYDDGCDY YQINDDTLINT GWAEVFT LR+NPLGRNVGVTGPADTNNRRILTHAFVHRTH+D+FGRFFP+SF+NWWSDDWISNVYGREHTLRDH++TITHDV+SQK P RY +D +AE SL EL+ G Sbjct: 447 MEHAPSYVVSALMQDAYDDGCDYLYQINDDTLINTPGWAEVFTSALRDNPLGRNVGVTGPADTNNRRILTHAFVHRTHIDIFGRFFPLSFKNWWSDDWISNVYGREHTLRDHAVTITHDVRSQKEDAPNRYDVDTSAERSLLKELKIG 594
BLAST of mRNA_L-elsbetiae_contig6188.14766.1 vs. uniprot
Match: A0A7S3HK59_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HK59_9STRA) HSP 1 Score: 211 bits (536), Expect = 6.280e-66 Identity = 98/183 (53.55%), Postives = 126/183 (68.85%), Query Frame = 1 Query: 1 LKSAPSYVVSALMQDAYDDGCDYFYQINDDTLINTVGWAEVFTGELRNNPLGRNVGVTGPADTNNRRILTHAFVHRTHMDVFGRFFPISFRNWWSDDWISNVYGREHTLRDHSMTITHDVKSQKSADPYRYQIDYTAELSLRDELRKGHVTLSKWLKANGMPPPLLPLVCGYAPLASDILGAL 549 L+ APS VVS LM AY D DYFYQ+NDDT+I + WA L +NP N GVTGP+D+NN +I TH+FVHRTH++VFG FP F+NWWSDDWIS VYG EHT R +TI H+V +QK++ RY +D +A++ L ELRKGHV + +WLK N +P LP++CGY PL + + L Sbjct: 44 LEGAPSQVVSQLMLSAYMDNFDYFYQVNDDTIITSPNWAPKLVAALASNPSIPNFGVTGPSDSNNEKIFTHSFVHRTHIEVFGHLFPPFFKNWWSDDWISTVYGVEHTFRCEDVTIKHNVNAQKTSSLTRYNVDQSAQVQLDKELRKGHVQVDEWLKKNKLPRLSLPVICGYIPLVTYLAKGL 226
BLAST of mRNA_L-elsbetiae_contig6188.14766.1 vs. uniprot
Match: A0A812U7Y0_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812U7Y0_SYMMI) HSP 1 Score: 202 bits (513), Expect = 1.650e-62 Identity = 98/179 (54.75%), Postives = 122/179 (68.16%), Query Frame = 1 Query: 1 LKSAPSYVVSALMQDAYDDGCDYFYQINDDTLINTVGWAEVFTGELRNNPLGRNVGVTGPADTNNRRILTHAFVHRTHMDVFGRFFPISFRNWWSDDWISNVYGREHTLR-DHSMTITHDVKSQKSADPYRYQIDYTAELSLRDELRKGHVTLSKWLKANGMPPPLLPLVCGYAPLASD 534 L+ APS VVS LM Y D DYFYQ+NDDT I T WA +F L++NPL NVGVTGP+DT+NR+I TH+FVHRTH ++FG FP +F+NWWSDDWIS VYG+ HT R S+ I H V +QK++ RY +D A+L L EL KG VT+ KWL P LP++CGY PL + Sbjct: 46 LQGAPSQVVSQLMLKGYSDNYDYFYQVNDDTQIVTPNWAPIFVKALQDNPLAPNVGVTGPSDTHNRQIFTHSFVHRTHFEIFGYLFPPAFKNWWSDDWISLVYGQSHTFRLGDSVQIQHMVGAQKTSGETRYSVDEGAKLILERELMKGFVTIDKWLAKQSYPRLPLPVLCGYIPLVRN 224
BLAST of mRNA_L-elsbetiae_contig6188.14766.1 vs. uniprot
Match: A0A7S0SZW8_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SZW8_9STRA) HSP 1 Score: 201 bits (510), Expect = 2.080e-58 Identity = 94/179 (52.51%), Postives = 120/179 (67.04%), Query Frame = 1 Query: 1 LKSAPSYVVSALMQDAYDDGCDYFYQINDDTLINTVGWAEVFTGELRNNPLGRNVGVTGPADTNNRRILTHAFVHRTHMDVFGRFFPISFRNWWSDDWISNVYGREHTLRDHSMTITHDVKSQKSADPYRYQIDYTAELSLRDELRKGHVTLSKWLKANGMPPPLLPLVCGYAPLASDI 537 L+ AP+ VVS L+ AY D DYFYQ+NDDT+I T W +L +NP N GVTGP DTNN +ILTH+FVHRTH++VFG FP F+NWWSDDWI+ VYG EHT + I H+V+SQK RY +D +A+L L +EL +GHV + +WLK N +P LP +CGY PL + Sbjct: 371 LQGAPTQVVSQLVLTAYVDNFDYFYQVNDDTMIVTPNWVPKLVEKLASNPSIPNFGVTGPTDTNNEKILTHSFVHRTHIEVFGHLFPPYFKNWWSDDWITTVYGSEHTFLCPDVQIKHNVESQKQHGFTRYDVDQSAQLKLEEELMRGHVQIDEWLKKNSLPRLPLPNICGYIPLTRHL 549
BLAST of mRNA_L-elsbetiae_contig6188.14766.1 vs. uniprot
Match: A0A6V1PYQ3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PYQ3_HETAK) HSP 1 Score: 194 bits (494), Expect = 6.100e-57 Identity = 94/181 (51.93%), Postives = 122/181 (67.40%), Query Frame = 1 Query: 1 LKSAPSYVVSALMQDAYDDGCDYFYQINDDTLINTVGWAEVFTGELRNNPLGRNVGVTGPADTNNRRILTHAFVHRTHMDVFGRFFPISFRNWWSDDWISNVYGREHTLRDHSMTITHDVKSQKSADPYRYQIDYTAELSLRDELRKGHVTLSKWLKANGMPPPLLPLVCGYAPLASDILG 543 L APS VV+ L AYD G DY YQINDDT I T W F L +NP+ N GVTGP D+ N +I THAFVHRTH++ G FFP +F+NWWSDDWIS VYG +HT R + ITH+V++QK++ RY IDY+A+ L E+R+G VTL+++L+ G P LP VCG++P D++ Sbjct: 213 LAGAPSQVVNRLAGLAYDAGFDYIYQINDDTEIETKQWHLKFMKALASNPVFPNFGVTGPTDSLNPKIFTHAFVHRTHIEAIGSFFPSTFKNWWSDDWISTVYGEKHTFRHADVQITHNVEAQKTSGWNRYDIDYSAQYFLEKEIRQGFVTLNRFLRGRGAPGLPLPDVCGFSPAVGDLVA 393
BLAST of mRNA_L-elsbetiae_contig6188.14766.1 vs. uniprot
Match: A0A7S2MG38_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MG38_9STRA) HSP 1 Score: 176 bits (447), Expect = 3.990e-52 Identity = 84/149 (56.38%), Postives = 106/149 (71.14%), Query Frame = 1 Query: 4 KSAPSYVVSALMQDAYDDGCDYFYQINDDTLINTVGWAEVFTGELRNNPLGRNVGVTGPADTNNRRILTHAFVHRTHMDVFGRFFPISFRNWWSDDWISNVYGREHTLRDHSMTITHDVKSQKSADPYRYQIDYTAELSLRDELRKGHV 450 K +PS VV L AY DG DY +Q+NDDT+I + WA+ F L +N + N+GVTGP DTNN RILTHAFVHRTH+DVFG FFP +F+NWWSDDWIS VYG HT R + +TH+V+SQK+ RY++D +A+ +LR EL G V Sbjct: 117 KGSPSQVVVGLANAAYKDGIDYMFQVNDDTVIVSHDWAKSFIRALESNTIHPNLGVTGPVDTNNDRILTHAFVHRTHLDVFGHFFPPAFKNWWSDDWISTVYGSLHTFRMPDVLVTHNVQSQKTGAFNRYEVDSSAQYNLRRELALGFV 265
BLAST of mRNA_L-elsbetiae_contig6188.14766.1 vs. uniprot
Match: A0A7S2XZB2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZB2_9STRA) HSP 1 Score: 165 bits (417), Expect = 1.300e-48 Identity = 78/152 (51.32%), Postives = 104/152 (68.42%), Query Frame = 1 Query: 91 TLINTVGWAEVFTGELRNNPLGRNVGVTGPADTNNRRILTHAFVHRTHMDVF-GRFFPISFRNWWSDDWISNVYGREHTLRDHSMTITHDVKSQKSADPYRYQIDYTAELSLRDELRKGHVTLSKWLKANGMPPPLLPLVCGYAPLASDILG 543 T I T WA+ L +NP+ N GVTGP DT N +I TH+FVHRTH++VF G +FP F+NWWSDDWIS VYGR HT R + +TH+VK+QK+ RY+IDYTA+ L ELR+G VT+S++L+ G+P LP +C Y+P D++ Sbjct: 1 TEIVTKYWADRLIQVLASNPILPNFGVTGPTDTLNPKIFTHSFVHRTHLEVFQGAYFPEGFKNWWSDDWISTVYGRRHTFRQQDVKVTHNVKAQKTGSWERYEIDYTAQWILEKELRQGFVTVSRYLRQKGLPGLPLPSICSYSPGIEDMVA 152
BLAST of mRNA_L-elsbetiae_contig6188.14766.1 vs. uniprot
Match: A0A7S2CTF8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CTF8_9STRA) HSP 1 Score: 168 bits (425), Expect = 1.040e-47 Identity = 82/175 (46.86%), Postives = 112/175 (64.00%), Query Frame = 1 Query: 10 APSYVVSALMQDAYDDGCDYFYQINDDTLINTVGWAEVFTGELRNNPLGRNVGVTGPADTNNRRILTHAFVHRTHMDVFGRFFPISFRNWWSDDWISNVYGREHTLRDHSMTITHDVKSQKSADPYRYQIDYTAELSLRDELRKGHVTLSKWLKANGMPPPLLPL--VCGYAPLA 528 APS+ V+ALM+ AYDDG D+ +Q+NDD + T+GW TG L +N + R +GVTGP D N RI TH FVHRTH+++ G FFP +FRN++SDDWIS VYG T R + + H+ K QK+ RY+ D +A +L ++ G + +WL+ G P PL VCG+ PLA Sbjct: 166 APSWAVAALMKRAYDDGADWLFQLNDDARLLTLGWELRLTGALASNQVTRLLGVTGPTDLTNPRIFTHVFVHRTHLEIHGSFFPPAFRNYYSDDWISAVYGTSSTFRLPDVKMKHETKKQKTGKIERYKPDMSARKALGKQVEDGTKRVLRWLRVRGQDPLRFPLDSVCGFVPLA 340
BLAST of mRNA_L-elsbetiae_contig6188.14766.1 vs. uniprot
Match: A0A7S2SID6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SID6_9STRA) HSP 1 Score: 150 bits (378), Expect = 1.100e-42 Identity = 74/174 (42.53%), Postives = 105/174 (60.34%), Query Frame = 1 Query: 10 APSYVVSALMQDAYDDGCDYFYQINDDTLINTVGWAEVFTGELRNNPLGRNVGVTGPADTNNRRILTHAFVHRTHMDVFGRFFPISFRNWWSDDWISNVYGREHTLRDHSMTITHDVKSQKSADPYRYQIDYTAELSLRDELRKGHVTLSKWLKA--NGMPPPLLPLVCGYAPL 525 APS+ VS LM AY DG ++ +Q+NDD + T W L +NP+ +G TGP D +N+RI TH F HRTHMD+ RFFP +F+N++SDDWI++VYG T + ++ +TH K+QK RY D+ A SL E+ G + + WL + +G P+ VCGY P+ Sbjct: 2 APSWAVSNLMDQAYRDGAEWLFQLNDDAKLETQRWERALASVLASNPIHPFLGATGPVDASNKRIFTHVFTHRTHMDIHKRFFPKAFKNYFSDDWITSVYGAASTFKLPTVRMTHQTKAQKKGAIERYHPDHNARRSLGTEVHSGALRIVHWLNSTLDGGKWPVH-AVCGYTPI 174
BLAST of mRNA_L-elsbetiae_contig6188.14766.1 vs. uniprot
Match: A0A2V7I8E0_9BACT (Uncharacterized protein n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V7I8E0_9BACT) HSP 1 Score: 138 bits (347), Expect = 1.740e-37 Identity = 70/156 (44.87%), Postives = 93/156 (59.62%), Query Frame = 1 Query: 10 APSYVVSALMQDAYDDGCDYFYQINDDTLINTVGWAEVFTGELRNNPLGRNVGVTGPADTNNRRILTHAFVHRTHMDVFGRFFPISFRNWWSDDWISNVYGREHTLRDHSMTITHDVKSQKSADPYRYQIDYTAELSLRDELRKGHVTLSKWLKAN 477 AP V +AL + A DDG D+FYQ+ DD ++ TVGWA F L VGVTGP D NN R+LT +FV RTHM++FG +FP +FRNWWSDDWI+ VY +H S T+ + + RY++DY L E+ G L++WL+A Sbjct: 78 APCAVWNALFRRACDDGADFFYQLGDDVVLETVGWATAFPLVLETMA---GVGVTGPLDRNNPRLLTQSFVSRTHMEIFGAYFPGAFRNWWSDDWITEVYQPDHLRPIPSQTVNN------AGTGVRYEVDYAGAALLPREVAAGREVLARWLRAR 224 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6188.14766.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6188.14766.1 >prot_L-elsbetiae_contig6188.14766.1 ID=prot_L-elsbetiae_contig6188.14766.1|Name=mRNA_L-elsbetiae_contig6188.14766.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=183bp LKSAPSYVVSALMQDAYDDGCDYFYQINDDTLINTVGWAEVFTGELRNNPback to top mRNA from alignment at L-elsbetiae_contig6188:9820..11363- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6188.14766.1 ID=mRNA_L-elsbetiae_contig6188.14766.1|Name=mRNA_L-elsbetiae_contig6188.14766.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1544bp|location=Sequence derived from alignment at L-elsbetiae_contig6188:9820..11363- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6188:9820..11363- >mRNA_L-elsbetiae_contig6188.14766.1 ID=mRNA_L-elsbetiae_contig6188.14766.1|Name=mRNA_L-elsbetiae_contig6188.14766.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1098bp|location=Sequence derived from alignment at L-elsbetiae_contig6188:9820..11363- (Laminarionema elsbetiae ELsaHSoW15)back to top |