mRNA_L-elsbetiae_contig6182.14763.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6182.14763.1
Unique NamemRNA_L-elsbetiae_contig6182.14763.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6182.14763.1 vs. uniprot
Match: A0A6H5JG59_9PHAE (NADH-cytochrome b5 reductase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG59_9PHAE)

HSP 1 Score: 465 bits (1197), Expect = 1.780e-161
Identity = 231/291 (79.38%), Postives = 257/291 (88.32%), Query Frame = 3
Query:    3 LAGAGGAAVFFNH---SSFR*TTTKMAETSDTVNVAFSAKDFREFPLQSIEEMTHNVKRFRVGLPSAEHVMGMRTASCIVIKGKGKDGSVAERPYTPTTTNDTKGHFDLVIKVYPDGNVSNHMFNLKVGDMVEVKGPFPKFDYSANVKKQIGMIAGGTGITPMLQVLQELLFNPGDKTKVTLLFANRTPADIMLKAEIDKLAAEHDNFEVVYVLSKVDKAKEGWTGETGHVNPSLIETHLPEPSGDATIFVCGPPGMVNAICGPKNEDKTQGELTGALKGMGYTSDMVYKF 866
            LAGA GAA  F++   SSFR +T  MAE +D+   AFS K+FR+FPL+ IE+MTHNV+RFR+GLPS EHVMGM+TASCIV+KGKGKDGSVA RPYTPTTTNDTKGHFDLVIKVYP+GNVS+H+F+LKVGD V VKGPFPKFDYS NVKK+IGMIAGGTGITPMLQVLQELL NP DKTKVTLLFAN T ADIMLKAEIDKLAAEHDNF+VVYV   VDKA+EGWTG TGHVN SLIETHLP+PSGD+ IFVCGPPGM+NAI GPKNEDK+QGE+ G LK +GYTSDMVYKF
Sbjct:   25 LAGAAGAAALFHNTSTSSFR-STAAMAEATDSSKTAFSPKEFRDFPLREIEDMTHNVRRFRIGLPSEEHVMGMKTASCIVVKGKGKDGSVAVRPYTPTTTNDTKGHFDLVIKVYPEGNVSSHLFSLKVGDTVAVKGPFPKFDYSPNVKKEIGMIAGGTGITPMLQVLQELLLNPEDKTKVTLLFANVTAADIMLKAEIDKLAAEHDNFDVVYV---VDKAEEGWTGATGHVNASLIETHLPKPSGDSVIFVCGPPGMMNAISGPKNEDKSQGEIGGVLKALGYTSDMVYKF 311          
BLAST of mRNA_L-elsbetiae_contig6182.14763.1 vs. uniprot
Match: A0A835ZLM4_9STRA (NADH-cytochrome b5 reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLM4_9STRA)

HSP 1 Score: 294 bits (752), Expect = 2.580e-94
Identity = 139/263 (52.85%), Postives = 187/263 (71.10%), Query Frame = 3
Query:   78 TSDTVNVAFSAKDFREFPLQSIEEMTHNVKRFRVGLPSAEHVMGMRTASCIVIKGKGKDGSVAERPYTPTTTNDTKGHFDLVIKVYPDGNVSNHMFNLKVGDMVEVKGPFPKFDYSANVKKQIGMIAGGTGITPMLQVLQELLFNPGDKTKVTLLFANRTPADIMLKAEIDKLAAEHDNFEVVYVLSKVDKAKEGWTGETGHVNPSLIETHLPEPSGDATIFVCGPPGMVNAICGPKNEDKTQGELTGALKGMGYTSDMVYKF 866
            TS    VA S K++REFP+  +  ++H+ K F++ LPS++H  G+ TASC++++G G DG    RPYTPTT N T GHFDLVIK YP+GNVS++M  LK GD + VKGPFPK   + N+K+ IGMIAGGTGITPM Q + ELL    D T +TLLF NRTP+DI+LKAE+D LAA H  F++VY++ K D +   W G +G++  + I+ ++P PS D  +FVCGPP ++ +I G K +DK+QG L GALK  G+T +MVYKF
Sbjct:   34 TSTQTTVALSPKEWREFPVSEVHTLSHDTKMFKIQLPSSKHETGLETASCLLVQGTGLDGKPTVRPYTPTTLNKTLGHFDLVIKRYPEGNVSSYMHGLKPGDKLMVKGPFPKLKVTPNMKRNIGMIAGGTGITPMYQCILELLDASDDATNITLLFGNRTPSDILLKAELDALAATHPRFKLVYIVDKPDSS---WKGLSGYITANEIQKYMPPPSADNMVFVCGPPPLMKSISGDKAKDKSQGPLEGALKACGFTEEMVYKF 293          
BLAST of mRNA_L-elsbetiae_contig6182.14763.1 vs. uniprot
Match: A0A7S2V2T1_9STRA (NADH-cytochrome b5 reductase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2T1_9STRA)

HSP 1 Score: 280 bits (716), Expect = 7.350e-89
Identity = 140/258 (54.26%), Postives = 178/258 (68.99%), Query Frame = 3
Query:   96 VAFSAKDFREFPLQSIEEMTHNVKRFRVGLPSAEHVMGMRTASCIVIKGKGKDGSVAE-RPYTPTTTNDTKGHFDLVIKVYPDGNVSNHMFNLKVGDMVEVKGPFPKFDYSANVKKQIGMIAGGTGITPMLQVLQELLFNPGDKTKVTLLFANRTPADIMLKAEIDKLAAEHDNFEVVYVLSKVDKAKEGWTGETGHVNPSLIETHLPEPSGDATIFVCGPPGMVNAICGPKNEDKTQGELTGALKGMGYTSDMVYKF 866
            VAFSAK++R FPL  I E+T N   FR  LPS EH MG+  ASCI +K   K+G     RPYTPTT ND KG+FDL++K YP+G VS++  NLK+GD + VKGP+ K  Y  N+ K+IGMIAGGTGITPMLQ+L+ +L NP DKT+V L+FAN T  DIM K  +D++A E+ NF V YV++K    +  W G  G V+   +E  +P P     +FVCGPPGM+ +I G K EDK+QGE++G LK  GYTS MVYKF
Sbjct:   41 VAFSAKEWRSFPLVQIRELTPNTSLFRFNLPSQEHEMGLSVASCIEVKAPPKEGGKPMIRPYTPTTNNDVKGYFDLIVKDYPNGKVSSYFHNLKIGDSILVKGPYDKLQYKPNMFKRIGMIAGGTGITPMLQMLKVILSNPKDKTEVHLVFANNTEDDIMQKNVLDQMAVEYHNFHVHYVVAK---PRPSWKGGVGFVDLDTVERKIPAPEEGTMVFVCGPPGMMESISGDKAEDKSQGEVSGVLKERGYTSGMVYKF 295          
BLAST of mRNA_L-elsbetiae_contig6182.14763.1 vs. uniprot
Match: A0A836C9R3_9STRA (NADH-cytochrome b5 reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9R3_9STRA)

HSP 1 Score: 278 bits (711), Expect = 3.650e-88
Identity = 136/264 (51.52%), Postives = 182/264 (68.94%), Query Frame = 3
Query:   78 TSDTVNVAFSAKDFREFPLQSIEEMTHNVKRFRVGLPSAEHVMGMRTASCIVIKGKGKDG-SVAERPYTPTTTNDTKGHFDLVIKVYPDGNVSNHMFNLKVGDMVEVKGPFPKFDYSANVKKQIGMIAGGTGITPMLQVLQELLFNPGDKTKVTLLFANRTPADIMLKAEIDKLAAEHDNFEVVYVLSKVDKAKEGWTGETGHVNPSLIETHLPEPSGDATIFVCGPPGMVNAICGPKNEDKTQGELTGALKGMGYTSDMVYKF 866
            T  +V  A   +++R+F ++ I  ++H+ K+F V LPS EH +GM TASC++++G G DG S   RPYTPT+ N TKGHF+LVIK Y  G VS++M  L VGD ++VKGPFPK     N+KK+IG+IAGGTGITPM Q +QELL   GD T++ LL+ N+TP DI+LK+E+D LA ++  F VVY   KV +A +GWTG  GH+     + +LP PS D  +FVCGPP ++ AI G K  DK+QG + G LK +GYT   VYKF
Sbjct:   31 TQLSVKTALDPQEWRQFTVKEITPLSHDTKKFTVALPSEEHELGMVTASCLMVEGTGLDGTSQVARPYTPTSLNGTKGHFELVIKKYDKGQVSSYMHGLSVGDAIKVKGPFPKIKLDPNMKKRIGLIAGGTGITPMYQCIQELLEADGDATEMVLLYGNKTPKDILLKSELDALATKYPRFSVVY---KVGEATDGWTGPVGHIGLEDCKQYLPPPSDDHMVFVCGPPPLMKAISGDKGPDKSQGAVDGVLKELGYTETQVYKF 291          
BLAST of mRNA_L-elsbetiae_contig6182.14763.1 vs. uniprot
Match: A0A6S9JGT0_HETAK (NADH-cytochrome b5 reductase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9JGT0_HETAK)

HSP 1 Score: 278 bits (710), Expect = 5.520e-88
Identity = 129/262 (49.24%), Postives = 185/262 (70.61%), Query Frame = 3
Query:   81 SDTVNVAFSAKDFREFPLQSIEEMTHNVKRFRVGLPSAEHVMGMRTASCIVIKGKGKDGSVAERPYTPTTTNDTKGHFDLVIKVYPDGNVSNHMFNLKVGDMVEVKGPFPKFDYSANVKKQIGMIAGGTGITPMLQVLQELLFNPGDKTKVTLLFANRTPADIMLKAEIDKLAAEHDNFEVVYVLSKVDKAKEGWTGETGHVNPSLIETHLPEPSGDATIFVCGPPGMVNAICGPKNEDKTQGELTGALKGMGYTSDMVYKF 866
            +D    AFS K++R F L  + E+TH+   FR  LP+ +H MGM+T+SCI+++G+ + GS+  RPYTPT+TN+ KG FDL++K YP+GNVS+++  LK+GD + VKGP+ K +Y  N+ K+IGMIAGG+GITPM+Q+ +E+L NP D T+++L+FAN T  DIM KA +D++AA++ NF V Y    V  A  GW    G  +  +IE  +P P     +FVCGP GM++A+CGPK ++ TQGEL G LK  G+T++ VYKF
Sbjct:   35 NDGEKKAFSPKEWRSFKLIQVRELTHDTSLFRFALPTTQHEMGMKTSSCIMVQGETRTGSMVARPYTPTSTNEQKGFFDLIVKNYPNGNVSSYIHGLKIGDNLNVKGPYMKLEYKPNMFKRIGMIAGGSGITPMIQLCREILSNPDDTTEISLIFANNTEGDIMQKAWLDQMAAQYHNFRVYYT---VRDAPAGWRQGQGVCDAEMIEKKMPAPEAGTMVFVCGPDGMMDAVCGPKGKNYTQGELQGLLKERGFTAEQVYKF 293          
BLAST of mRNA_L-elsbetiae_contig6182.14763.1 vs. uniprot
Match: A0A137P6R8_CONC2 (Ferredoxin reductase-like protein (Fragment) n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137P6R8_CONC2)

HSP 1 Score: 269 bits (687), Expect = 4.460e-85
Identity = 130/259 (50.19%), Postives = 182/259 (70.27%), Query Frame = 3
Query:   99 AFSAKDFREFPLQSIEEMTHNVKRFRVGLPSAEHVMGMRTASCIVIKGKGKDGSVAERPYTPTTTNDTKGHFDLVIKVYPDGNVSNHMFNLKVGDMVEVKGPFPKFDYSANVKKQIGMIAGGTGITPMLQVLQELLFNPGDKTKVTLLFANRTPADIMLKAEIDKLAAEH-DNFEVVYVLSKVDKAKEGWTGETGHVNPSLIETHLPEPSGD--ATIFVCGPPGMVNAICGPKNEDKTQGELTGALKGMGYTSDMVYKF 866
            A   K+F+ F L+ I+ ++H+ K FR  LP   + +G+  ASC++ K  GKDG    RPYTPT+    +G+FD +IK Y  G +S H+ +LKVGD +EVKGPFPK+ Y+AN   +IG+IAGGTGITPMLQ+++++L NP DKTK+  +FANRT  DI+LK E+DKLA +H D F++ Y++S  +    GW+G+ GHVN  +I+  L + S D  + +FVCGPPGMV  +CGPK +D +QGE+ G LK +GY+ D VYKF
Sbjct:    1 ALDPKEFKAFKLKEIQSISHDTKLFRFELPPDSN-LGLPIASCVLTKAPGKDGKDVMRPYTPTSRETDRGYFDFIIKRYESGTMSKHIHSLKVGDTLEVKGPFPKYPYTANTHSEIGLIAGGTGITPMLQLIRKVLDNPQDKTKINFIFANRTTKDILLKDELDKLAKQHPDRFKIKYIISNKEP---GWSGDVGHVNKDMIKNTL-KGSADKQSIVFVCGPPGMVELVCGPKAKDNSQGEVKGILKDLGYSGDNVYKF 254          
BLAST of mRNA_L-elsbetiae_contig6182.14763.1 vs. uniprot
Match: A0A137P6R6_CONC2 (NADH-cytochrome b5 reductase n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137P6R6_CONC2)

HSP 1 Score: 269 bits (687), Expect = 5.550e-84
Identity = 140/292 (47.95%), Postives = 193/292 (66.10%), Query Frame = 3
Query:    3 LAGAGGAAVFFNHSSFR*TTTKMAETSDTVN--VAFSAKDFREFPLQSIEEMTHNVKRFRVGLPSAEHVMGMRTASCIVIKGKGKDGSVAERPYTPTTTNDTKGHFDLVIKVYPDGNVSNHMFNLKVGDMVEVKGPFPKFDYSANVKKQIGMIAGGTGITPMLQVLQELLFNPGDKTKVTLLFANRTPADIMLKAEIDKLAAEH-DNFEVVYVLSKVDKAKEGWTGETGHVNPSLIETHLP-EPSGDATIFVCGPPGMVNAICGPKNEDKTQGELTGALKGMGYTSDMVYKF 866
            LA A GA  ++  S       K+A  S+  +  +  S K+F+ F L+ ++++ +N K FR  LP  +  + +  ASC+V +  GK+G    RPYTPT+  + KGHFD +IK Y  G +S H+ NLKVGD +EVKGPFPK+ Y AN   + G+IAGGTGITPMLQ+++++L NP DKTK+ L+FAN T  DI+LK E+DKLA +H D F+V YV++K +    GWTG+ G V   LI+  L    + D+ +FVCGP  M+N + GPKN DK+QGEL G LK +GYTS+ VYKF
Sbjct:   48 LAVAAGAGSYYYFSG---NEAKVAAKSENKSDDLLLSPKEFKSFKLKEVQDINYNTKLFRFELP-VDRSLDLPVASCVVTRAPGKNGKNVIRPYTPTSEENAKGHFDFIIKHYEGGPMSTHIHNLKVGDTLEVKGPFPKYFYKANTIDEAGLIAGGTGITPMLQLIRKILDNPADKTKINLIFANNTTKDILLKDELDKLAKQHADRFKVKYVIAKQES---GWTGDVGFVTKDLIKKTLQGSQNKDSMVFVCGPDPMINVLSGPKNPDKSQGELGGILKELGYTSENVYKF 332          
BLAST of mRNA_L-elsbetiae_contig6182.14763.1 vs. uniprot
Match: A0A8H7EQF0_9FUNG (NADH-cytochrome b5 reductase n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7EQF0_9FUNG)

HSP 1 Score: 268 bits (686), Expect = 1.070e-83
Identity = 145/302 (48.01%), Postives = 197/302 (65.23%), Query Frame = 3
Query:    3 LAGAGGAA-VFFNHSSFR*TTTKMAETSDTVNVA-----FSAKDFREFPLQSIEEMTHNVKRFRVGLPSAEHVMGMRTASCIVIKGK--GKDGSVAE--RPYTPTTTNDTKGHFDLVIKVYPDGNVSNHMFNLKVGDMVEVKGPFPKFDYSANVKKQIGMIAGGTGITPMLQVLQELLF--NPGDKTKVTLLFANRTPADIMLKAEIDKLAAEH-DNFEVVYVLSKVDKAKEGWTGETGHVNPSLIETHLPEPSGDATI-FVCGPPGMVNAICGPKNEDKTQGELTGALKGMGYTSDMVYKF 866
            LAG G AA +++N ++   T  +  E   TV  A     F    F+ F LQ +E + HN   +R  L S  HV G+  ASC++ +     KDGS     RPYTPT+T DTKGH D +IKVYP+G +S H+ NLKVG+ +E+KGPFPK+++  N  + +GMIAGGTGITPMLQ+++++    +P DKTK+TL+FAN    DI+LK E+D +A ++ D F+VVY L+K  K    W+G TG VN  LI++HLP P  D +I FVCGP  M+ A+ GPK +DK+QGEL G LK +GY  + VYKF
Sbjct:   46 LAGLGAAAGIYYNQNTA--TVKQHVEPLSTVAAAAAEKAFDPSQFKPFKLQKVEPINHNTSLYRFELDSDNHVAGLPIASCVITRYPITKKDGSTGYVIRPYTPTSTADTKGHVDFIIKVYPEGKMSQHIHNLKVGETLEIKGPFPKYNWEENPVENVGMIAGGTGITPMLQIIRKVFDAKSPDDKTKITLIFANEAEDDILLKDELDTIAKQNPDRFKVVYALNKPPK---DWSGPTGFVNADLIKSHLPGPENDKSIVFVCGPDPMLAALSGPKAQDKSQGELAGVLKELGYAKERVYKF 342          
BLAST of mRNA_L-elsbetiae_contig6182.14763.1 vs. uniprot
Match: A0A2K1KNZ2_PHYPA (FAD-binding FR-type domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KNZ2_PHYPA)

HSP 1 Score: 268 bits (686), Expect = 1.140e-83
Identity = 136/288 (47.22%), Postives = 189/288 (65.62%), Query Frame = 3
Query:   18 GAAVFFNHSSFR*TTTKMAETSDTVNVAFSAKDFREFPLQSIEEMTHNVKRFRVGLPSAEHVMGMRTASCIVIK---GKGKDGS--VAERPYTPTTTNDTKGHFDLVIKVYPDGNVSNHMFNLKVGDMVEVKGPFPKFDYSANVKKQIGMIAGGTGITPMLQVLQELLFNPGDKTKVTLLFANRTPADIMLKAEIDKLAAEHDNFEVVYVLSKVDKAKEGWTGETGHVNPSLIETHLPEPSGDATIFVCGPPGMVNAICGPKNEDKTQGELTGALKGMGYTSDMVYKF 866
            GA  F++      +   +AE S+    A + K+F +F +  + ++ HN K +R    S E  +G+  ASC++ K   GK KDGS     RPYTP +  D+KG+FDL++K+YP+G ++ H+  LK GD ++VKGP PK  Y+ N+KKQIGMIAGGTGITPMLQV+  ++ NP D T+V+L+FAN TPADI+LK+++D L+  H NF+V YV   VD     W G  G++N  ++   LP PS D  I VCGPPG++N I G K  D++QGEL G LK +GYTS+ VYKF
Sbjct:   62 GAGAFYSCQKMINSEPALAEASEP-KTALNPKEFVKFKVSEVRDVNHNTKLYRFTFDSQE-ALGLHVASCLITKAEIGKKKDGSPNYVIRPYTPISPPDSKGYFDLLVKIYPNGKMTQHLAQLKPGDTLDVKGPIPKLPYAPNMKKQIGMIAGGTGITPMLQVIDAIVSNPEDNTQVSLVFANTTPADILLKSKLDALSFAHPNFKVYYV---VDSPTNDWKGGKGYINKDVLLKGLPSPSDDTLILVCGPPGLMNLISGDKAPDRSQGELVGLLKELGYTSEQVYKF 344          
BLAST of mRNA_L-elsbetiae_contig6182.14763.1 vs. uniprot
Match: A9RJM3_PHYPA (NADH-cytochrome b5 reductase n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RJM3_PHYPA)

HSP 1 Score: 264 bits (674), Expect = 5.450e-83
Identity = 130/261 (49.81%), Postives = 178/261 (68.20%), Query Frame = 3
Query:   99 AFSAKDFREFPLQSIEEMTHNVKRFRVGLPSAEHVMGMRTASCIVIK---GKGKDGS--VAERPYTPTTTNDTKGHFDLVIKVYPDGNVSNHMFNLKVGDMVEVKGPFPKFDYSANVKKQIGMIAGGTGITPMLQVLQELLFNPGDKTKVTLLFANRTPADIMLKAEIDKLAAEHDNFEVVYVLSKVDKAKEGWTGETGHVNPSLIETHLPEPSGDATIFVCGPPGMVNAICGPKNEDKTQGELTGALKGMGYTSDMVYKF 866
            A + K+F +F +  + ++ HN K +R    S E  +G+  ASC++ K   GK KDGS     RPYTP +  D+KG+FDL++K+YP+G ++ H+  LK GD ++VKGP PK  Y+ N+KKQIGMIAGGTGITPMLQV+  ++ NP D T+V+L+FAN TPADI+LK+++D L+  H NF+V YV   VD     W G  G++N  ++   LP PS D  I VCGPPG++N I G K  D++QGEL G LK +GYTS+ VYKF
Sbjct:    7 ALNPKEFVKFKVSEVRDVNHNTKLYRFTFDSQE-ALGLHVASCLITKAEIGKKKDGSPNYVIRPYTPISPPDSKGYFDLLVKIYPNGKMTQHLAQLKPGDTLDVKGPIPKLPYAPNMKKQIGMIAGGTGITPMLQVIDAIVSNPEDNTQVSLVFANTTPADILLKSKLDALSFAHPNFKVYYV---VDSPTNDWKGGKGYINKDVLLKGLPSPSDDTLILVCGPPGLMNLISGDKAPDRSQGELVGLLKELGYTSEQVYKF 263          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6182.14763.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JG59_9PHAE1.780e-16179.38NADH-cytochrome b5 reductase n=1 Tax=Ectocarpus sp... [more]
A0A835ZLM4_9STRA2.580e-9452.85NADH-cytochrome b5 reductase n=1 Tax=Tribonema min... [more]
A0A7S2V2T1_9STRA7.350e-8954.26NADH-cytochrome b5 reductase n=1 Tax=Fibrocapsa ja... [more]
A0A836C9R3_9STRA3.650e-8851.52NADH-cytochrome b5 reductase n=1 Tax=Tribonema min... [more]
A0A6S9JGT0_HETAK5.520e-8849.24NADH-cytochrome b5 reductase n=1 Tax=Heterosigma a... [more]
A0A137P6R8_CONC24.460e-8550.19Ferredoxin reductase-like protein (Fragment) n=1 T... [more]
A0A137P6R6_CONC25.550e-8447.95NADH-cytochrome b5 reductase n=1 Tax=Conidiobolus ... [more]
A0A8H7EQF0_9FUNG1.070e-8348.01NADH-cytochrome b5 reductase n=1 Tax=Apophysomyces... [more]
A0A2K1KNZ2_PHYPA1.140e-8347.22FAD-binding FR-type domain-containing protein n=1 ... [more]
A9RJM3_PHYPA5.450e-8349.81NADH-cytochrome b5 reductase n=1 Tax=Physcomitrium... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6182contigL-elsbetiae_contig6182:5666..8540 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score261.2
Seed ortholog evalue5.5e-67
Seed eggNOG ortholog248742.XP_005645756.1
KEGG koko:K00326
KEGG ReactionR00100
KEGG Pathwayko00520,map00520
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004128,GO:0005488,GO:0005507,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005758,GO:0005794,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0009505,GO:0009628,GO:0009651,GO:0012505,GO:0016491,GO:0016651,GO:0016653,GO:0030312,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0050896,GO:0055114,GO:0070013,GO:0071944
EggNOG free text desc.Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family
EggNOG OGs34KKS@3041,37RUI@33090,COG0543@1,KOG0534@2759
EC1.6.2.2
COG Functional cat.C
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons2
Model size1246
Cds size801
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6182.14763.1prot_L-elsbetiae_contig6182.14763.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6182 7672..8472 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816678.0901735-UTR-L-elsbetiae_contig6182:5665..60081622816678.0901735-UTR-L-elsbetiae_contig6182:5665..6008Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6182 5666..6008 -
1691683733.2977805-UTR-L-elsbetiae_contig6182:5665..60081691683733.2977805-UTR-L-elsbetiae_contig6182:5665..6008Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6182 5666..6008 -
1622816678.109764-UTR-L-elsbetiae_contig6182:7637..76711622816678.109764-UTR-L-elsbetiae_contig6182:7637..7671Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6182 7638..7671 -
1691683733.3121784-UTR-L-elsbetiae_contig6182:7637..76711691683733.3121784-UTR-L-elsbetiae_contig6182:7637..7671Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6182 7638..7671 -
1622816678.1347628-UTR-L-elsbetiae_contig6182:8472..85401622816678.1347628-UTR-L-elsbetiae_contig6182:8472..8540Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6182 8473..8540 -
1691683733.3329203-UTR-L-elsbetiae_contig6182:8472..85401691683733.3329203-UTR-L-elsbetiae_contig6182:8472..8540Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6182 8473..8540 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816678.1229727-CDS-L-elsbetiae_contig6182:7671..84721622816678.1229727-CDS-L-elsbetiae_contig6182:7671..8472Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6182 7672..8472 -
1691683733.3226335-CDS-L-elsbetiae_contig6182:7671..84721691683733.3226335-CDS-L-elsbetiae_contig6182:7671..8472Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6182 7672..8472 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6182.14763.1

>prot_L-elsbetiae_contig6182.14763.1 ID=prot_L-elsbetiae_contig6182.14763.1|Name=mRNA_L-elsbetiae_contig6182.14763.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=267bp
MAETSDTVNVAFSAKDFREFPLQSIEEMTHNVKRFRVGLPSAEHVMGMRT
ASCIVIKGKGKDGSVAERPYTPTTTNDTKGHFDLVIKVYPDGNVSNHMFN
LKVGDMVEVKGPFPKFDYSANVKKQIGMIAGGTGITPMLQVLQELLFNPG
DKTKVTLLFANRTPADIMLKAEIDKLAAEHDNFEVVYVLSKVDKAKEGWT
GETGHVNPSLIETHLPEPSGDATIFVCGPPGMVNAICGPKNEDKTQGELT
GALKGMGYTSDMVYKF*
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mRNA from alignment at L-elsbetiae_contig6182:5666..8540-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6182.14763.1 ID=mRNA_L-elsbetiae_contig6182.14763.1|Name=mRNA_L-elsbetiae_contig6182.14763.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2875bp|location=Sequence derived from alignment at L-elsbetiae_contig6182:5666..8540- (Laminarionema elsbetiae ELsaHSoW15)
CACTCGCCGGAGCCGGAGGGGCCGCCGTCTTTTTCAACCACAGCAGCTTT AGGTAAACAACCACCAAGATGGCCGAGACGTCCGACACAGTGAATGTGGC CTTCAGCGCCAAGGATTTCCGTGAGTTCCCCTTGCAATCGATCGAGGAAA TGACGCACAACGTGAAGCGTTTCCGCGTGGGGCTGCCGTCAGCGGAGCAC GTGATGGGCATGCGCACGGCGTCTTGCATCGTGATCAAGGGGAAGGGCAA GGACGGGAGCGTGGCCGAGCGGCCGTACACTCCTACCACCACCAACGACA CCAAGGGCCACTTCGACTTGGTGATCAAGGTCTACCCCGATGGGAACGTG TCTAACCACATGTTCAACCTCAAGGTTGGCGACATGGTCGAAGTGAAGGG GCCTTTTCCTAAGTTCGACTACTCGGCGAACGTCAAGAAGCAGATCGGGA TGATCGCCGGGGGCACCGGCATCACGCCTATGCTGCAGGTGCTGCAGGAG CTCCTGTTCAACCCGGGGGACAAGACGAAGGTGACCCTCCTCTTCGCCAA CAGGACGCCGGCCGATATCATGCTCAAGGCGGAGATCGACAAGCTCGCCG CCGAGCACGACAACTTCGAGGTTGTCTACGTTTTGAGCAAGGTGGACAAG GCGAAGGAGGGGTGGACCGGAGAAACGGGGCACGTAAACCCCTCCCTCAT CGAGACCCACCTCCCCGAGCCCTCCGGAGACGCTACGATCTTCGTGTGCG GCCCGCCCGGCATGGTAAACGCTATCTGTGGGCCCAAGAACGAGGACAAG ACTCAGGGAGAGCTGACTGGAGCGCTCAAGGGCATGGGCTACACCTCCGA CATGGTCTACAAGTTTTGAGCAGCTCGAAACGGAGTGTGGAGTGTGTACA TATGTAAGTGTTACAAGCTCACGCACGCGCCCCCCAAGTTTTGCAAGATC ATGGCAGGTACAAGCGCTCAAGCACAGAAATGGGCTAAAGCAAGCGCAGC AGTCTGTAAGGACAGCAATATTTTTGAGACCAGCTGTGGAAAAGAGGGTT TCGTCCTCGACAAACGTTAGTGTGATCCAACCCTTTATGAGGGTGGCACC CACATTACCCCCCTCTTTGTTCGAGTCTTTTTCTTGGTTGCTGGGCAAAA ACAAGGCTCTTTAGGGGTAACCGGAACCCGACCGGCTGGCGGCGAGTCGC CCTATCGTCTTTTTCCAACACCCTTAATTGTGCGTGTTTTATCGGGTGCG CCACTTCCGCTACAGCACTTAGAAGTCACGAGTTCGATTATCAGGTCTTG GTTTCTATCCCCCATGTTGTTTCTTTTTTTCCAAGAGGAAAGTTCTTTTT GACTTTTTTTCTTGAGAAAGAAATCATGATGGAGAGATTCGAACTCGGGA CTTTGTCCATCAGAAACCGGTATCTAATCGTCGACGCCATTGTTGAGAGG GTTTCGTCCTCGACAGACGCTAAATAGTGTGATCCGACCCTTTATGAGGG TGGTACCCACACAGCCGACCTTCATAGCAGCGTGAATTATATATTTGTAG GTGTAATAATTAACACGCGTTGCAGCTTCTGCACAAACCACAAACAAAGT CACACTTCGATAAACCGAAGTCGAAATGGGTATCACCACCGCGAATCTCT GGATCCCCCTCGGTGTTCTCCATGCCATGCCTTACCTTAGGCCGGGTCTT GTGGCACGAAATTTTGCCGCGAAAATGGATTTTGTTCATGTCGGTAGCTC CCTCTTTGGAGGGGGGAAGGGGTCTCGGAGACGCAAACGAAATTTCTTTG GTCGCCAACCAAACCACGGCAATACTGCTGTCTCAGGCCGTAGCTCACAG TTTGCGACGATACCTTCTTGGCTGTATGCTCCATATCTATCGGAGTCTTG GGATATGTACTTTCCTGGTCATAGGCTTCGTGTGGCTCGAGGGGTAGTCG GCGTGCGACCGAAAATCACATTTCGTGTGACCAATCCCTCTGCGAAATGA CACGAACTTTCGTGTCGCGTTTTGCCAGACCGATCTGAATTTTGTCCACA ACATCACCCGGTCCTCCTACAAAAAAAGTCGCCTGACAACAAGGACTAGC TGCGACGAATCCCACGAGCATGGAGCGTAGGCCTGCAAGGTTTAATGGCA ATCTGTCGGCTATGGCCGGAGACTTCATGGGTGGCGTAGTGACGGTAGGG CAAGCCTCCATTTTGTGAGGGTTTGAGGCCCCAAGACCCCCCCTTCGATT CAGGGGCCCGCGCCAGAGCAAAAAATCGTTTCATGTTGCCATCAGATCCG GCCTTACGCAGATATGGCTGGATTCGATGTATACTTATGTTTTCGTCTGA CCACCCACCCCTGACCGCCACAAATCTTCATGCTCTGCCACCGCTTCTAA GGGAGGGGCGATGGGGACGGGATCGTTGATCTTGAATGCTTGCTGCACGG ATCATCGTATCCCATCCAGAAGGCGTACGGGACAGACAACACCGCTCTTC CTGTCTTCCCATATCCAACTCGATATTTGCAGGTGCCGTCTGGGCTGAGC GTTATGGTGATGGGTGGCGATGGCGGCATCAGGTACCAGCGCTACGCGCG CTGCGATTAATCGATTCGGATGAGACCGTCATGATAGCAACTCCATCGGT TGCGTGTCGTGTCGGTGGGACAACAGCATCGAGATATGGAGGGAGACATT TCGGCTACAAATATAACCAGCTTTCTTCTGAAGTGCCCGGAACAAGTTAT GGCCGAAGCGAAAAATTACACGTGCAGAGAGAGGCACGGCCTTTCATGCA ACCTTTTCAGAAGTTCGGCGTTTTGTCAGCACTCCGCAGCTACATTTTTT CCTTCCGCAGTCCTTCCTCTGACGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6182:5666..8540-

>mRNA_L-elsbetiae_contig6182.14763.1 ID=mRNA_L-elsbetiae_contig6182.14763.1|Name=mRNA_L-elsbetiae_contig6182.14763.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1602bp|location=Sequence derived from alignment at L-elsbetiae_contig6182:5666..8540- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCCGAGACGTCCGACACAGTGAATGTGGCCTTCAGCGCCAAGGATTT
CCGTGAGTTCCCCTTGCAATCGATCGAGGAAATGACGCACAACGTGAAGC
GTTTCCGCGTGGGGCTGCCGTCAGCGGAGCACGTGATGGGCATGCGCACG
GCGTCTTGCATCGTGATCAAGGGGAAGGGCAAGGACGGGAGCGTGGCCGA
GCGGCCGTACACTCCTACCACCACCAACGACACCAAGGGCCACTTCGACT
TGGTGATCAAGGTCTACCCCGATGGGAACGTGTCTAACCACATGTTCAAC
CTCAAGGTTGGCGACATGGTCGAAGTGAAGGGGCCTTTTCCTAAGTTCGA
CTACTCGGCGAACGTCAAGAAGCAGATCGGGATGATCGCCGGGGGCACCG
GCATCACGCCTATGCTGCAGGTGCTGCAGGAGCTCCTGTTCAACCCGGGG
GACAAGACGAAGGTGACCCTCCTCTTCGCCAACAGGACGCCGGCCGATAT
CATGCTCAAGGCGGAGATCGACAAGCTCGCCGCCGAGCACGACAACTTCG
AGGTTGTCTACGTTTTGAGCAAGGTGGACAAGGCGAAGGAGGGGTGGACC
GGAGAAACGGGGCACGTAAACCCCTCCCTCATCGAGACCCACCTCCCCGA
GCCCTCCGGAGACGCTACGATCTTCGTGTGCGGCCCGCCCGGCATGGTAA
ACGCTATCTGTGGGCCCAAGAACGAGGACAAGACTCAGGGAGAGCTGACT
GGAGCGCTCAAGGGCATGGGCTACACCTCCGACATGGTCTACAAGTTTTG
AATGGCCGAGACGTCCGACACAGTGAATGTGGCCTTCAGCGCCAAGGATT
TCCGTGAGTTCCCCTTGCAATCGATCGAGGAAATGACGCACAACGTGAAG
CGTTTCCGCGTGGGGCTGCCGTCAGCGGAGCACGTGATGGGCATGCGCAC
GGCGTCTTGCATCGTGATCAAGGGGAAGGGCAAGGACGGGAGCGTGGCCG
AGCGGCCGTACACTCCTACCACCACCAACGACACCAAGGGCCACTTCGAC
TTGGTGATCAAGGTCTACCCCGATGGGAACGTGTCTAACCACATGTTCAA
CCTCAAGGTTGGCGACATGGTCGAAGTGAAGGGGCCTTTTCCTAAGTTCG
ACTACTCGGCGAACGTCAAGAAGCAGATCGGGATGATCGCCGGGGGCACC
GGCATCACGCCTATGCTGCAGGTGCTGCAGGAGCTCCTGTTCAACCCGGG
GGACAAGACGAAGGTGACCCTCCTCTTCGCCAACAGGACGCCGGCCGATA
TCATGCTCAAGGCGGAGATCGACAAGCTCGCCGCCGAGCACGACAACTTC
GAGGTTGTCTACGTTTTGAGCAAGGTGGACAAGGCGAAGGAGGGGTGGAC
CGGAGAAACGGGGCACGTAAACCCCTCCCTCATCGAGACCCACCTCCCCG
AGCCCTCCGGAGACGCTACGATCTTCGTGTGCGGCCCGCCCGGCATGGTA
AACGCTATCTGTGGGCCCAAGAACGAGGACAAGACTCAGGGAGAGCTGAC
TGGAGCGCTCAAGGGCATGGGCTACACCTCCGACATGGTCTACAAGTTTT
GA
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