mRNA_L-elsbetiae_contig6177.14755.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6177.14755.1 vs. uniprot
Match: D7FXJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXJ0_ECTSI) HSP 1 Score: 350 bits (898), Expect = 1.010e-106 Identity = 183/291 (62.89%), Postives = 220/291 (75.60%), Query Frame = 1 Query: 31 DQSAVAVCAHTDDRVVHRVLLRRPAAPPGEKAPSALSAITTPQASKAVRLVRREGGHGPSCWVNRNLLVIGGEDGSLHCVRVVDGVDGQAACLSEETLRVKSGWNPLSGGSGGRGAKTVAVTGFWQEEKKQAMVLTLHADWSLRVWTTARLDS--RRRGGSLLHKVDARQLLGPSHHIHQTAGVDESGCFLSPVVG-----QEGYVVAAVAAEGGLPIHMVLLLPASGAEPEKRGVFEAPSDAGPLVDAYVDDSLTIWALWARPRGGG-TGAFEGGVCSYG-NVMLNAVHH 876 DQS++AVCA+TDDRVVHRVLL+RPAAPPG+KA SALSA++ PQ K +L REGG GPSCW+NR+LLV+GG DGSLHCV + +G+DGQ A L EETLRVK+GWNPL+ GSG A VAVTGFW+EE+KQA+VLTLH DWS RVW T+R + +RRGG L+ +VDARQ LG S H QTA VD S CFLSPV +E +VVAAVAAEGGLP+H+VL + G E +R FEAPS+AGPLVDA+V+ +W LW RPRGGG + GGV SYG N ++VHH Sbjct: 195 DQSSLAVCAYTDDRVVHRVLLQRPAAPPGDKAQSALSAMSAPQGRKVAKLGCREGGLGPSCWINRDLLVVGGMDGSLHCVTIAEGIDGQTASLCEETLRVKTGWNPLAVGSGDN-ASAVAVTGFWREEEKQAVVLTLHTDWSFRVWVTSRASTGAKRRGGGLVSRVDARQFLG-SPHERQTAAVDGSSCFLSPVAAVANPEEENFVVAAVAAEGGLPVHIVLTISPRGGELVRRCEFEAPSEAGPLVDAHVNHKGIVWTLWDRPRGGGGVSSGCGGVSSYGENGTFDSVHH 483 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6177.14755.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6177.14755.1 >prot_L-elsbetiae_contig6177.14755.1 ID=prot_L-elsbetiae_contig6177.14755.1|Name=mRNA_L-elsbetiae_contig6177.14755.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=292bp GGGGGGGGGPDQSAVAVCAHTDDRVVHRVLLRRPAAPPGEKAPSALSAITback to top mRNA from alignment at L-elsbetiae_contig6177:3628..11054+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6177.14755.1 ID=mRNA_L-elsbetiae_contig6177.14755.1|Name=mRNA_L-elsbetiae_contig6177.14755.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7427bp|location=Sequence derived from alignment at L-elsbetiae_contig6177:3628..11054+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6177:3628..11054+ >mRNA_L-elsbetiae_contig6177.14755.1 ID=mRNA_L-elsbetiae_contig6177.14755.1|Name=mRNA_L-elsbetiae_contig6177.14755.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1752bp|location=Sequence derived from alignment at L-elsbetiae_contig6177:3628..11054+ (Laminarionema elsbetiae ELsaHSoW15)back to top |