mRNA_L-elsbetiae_contig6165.14738.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6165.14738.1
Unique NamemRNA_L-elsbetiae_contig6165.14738.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6165.14738.1 vs. uniprot
Match: D7G2Q4_ECTSI (Fatty acid hydroxylase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2Q4_ECTSI)

HSP 1 Score: 435 bits (1118), Expect = 1.110e-146
Identity = 236/315 (74.92%), Postives = 262/315 (83.17%), Query Frame = 2
Query:  311 MSWV----LADGMLADVLLKGAGGA-AFSLVNSG-TWRWWHYPAWLSVILLGFEIMAALVHVLGRASRTASIRPRGKHLDEFEPLDRMFVAFNRCCTAVFTYHAIQYLWYGPWGGRVGWDISELGLSNGLGAFVALYVVYDXXXXXXXXXXXXXGLXXXXXXXXXRQKAPSRGNADAVNVHPFEFICGEYNHLLALHLVSRFVVPVHVVAAGAFIIAGGFLASLNHTRFDVRIPFLYEVRYHDIHHWFPDCNYGQYTMLWDWLMGSLKPYPVEVGKDGSEENGGSRSKGIQANVA-----ALADSAAAENKEKTG 1222
            MSW     L DG+LADVL+KGAGG  AFSLVN+  TW+WWHYPAWLSVILLG E +AA+VHV GRAS+ A+IRPRGKHLDEF PLDR+FVAFNRC TAVFTYHA+QYLWY PWGGRV W +SELGL++GLGA VA YVVYD  XXXXXXXXXXX  XXXXXXXXXRQKAP+RGNADAVNVHP EF+ GEYNHLLALHLVSR+VVPVHVV+AGAFI+AGGF ASLNHTRFD+RIPFLYEVRYHDIHHW+P+CNYGQYTMLWDW+MGSLK YP E       E+ G R + +   V      A +DS AAENKEK G
Sbjct:    1 MSWFPTLPLLDGLLADVLVKGAGGGVAFSLVNAADTWQWWHYPAWLSVILLGLEFVAAMVHVFGRASKAATIRPRGKHLDEFTPLDRLFVAFNRCSTAVFTYHAVQYLWYAPWGGRVAWGVSELGLASGLGALVAQYVVYDLFXXXXXXXXXXXXXXXXXXXXXXRQKAPTRGNADAVNVHPLEFLGGEYNHLLALHLVSRYVVPVHVVSAGAFIVAGGFFASLNHTRFDIRIPFLYEVRYHDIHHWYPECNYGQYTMLWDWVMGSLKAYPAE-------EDRGERKRNLGGGVTPPANGARSDSTAAENKEKAG 308          
BLAST of mRNA_L-elsbetiae_contig6165.14738.1 vs. uniprot
Match: A0A4D9CVT2_9STRA (Fatty acid hydroxylase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CVT2_9STRA)

HSP 1 Score: 272 bits (696), Expect = 1.570e-83
Identity = 134/271 (49.45%), Postives = 169/271 (62.36%), Query Frame = 2
Query:  344 DVLLKGAGGAAFSLVNSGTWRWWHYPAWLSVILLGFEIMAALVHVLGRASRTASIRPRGKHLDEFEPLDRMFVAFNRCCTAVFTYHAIQYLWYGPWGGRVGWDISELGLSNGLGAFVALYVVYDXXXXXXXXXXXXXGLXXXXXXXXXRQKAPSRGNADAVNVHPFEFICGEYNHLLALHLVSRFVVPVHVVAAGAFIIAGGFLASLNHTRFDVRIP----FLYEVRYHDIHHWFPDCNYGQYTMLWDWLMGSLKPYPVEVGKDGSEENGG 1144
            D+ L+GAGG AF L N+ TW   H+ AW  ++L G EI+A LV   GR  R  SI  RGKHLD  +  D  F+AFN+  T +F+YH +++LW      +V W + E+   N   A   L+VVYD              L         RQKAPSRGN DAVNVHP EF+ GEYNHL A++LVSRF++PVH + A AFI+ GGFLASLNHTRFD++ P     +Y+VR+HD+HHWFP+ NYGQY MLWD++ GS KPYP   G       GG
Sbjct:   19 DLFLRGAGGGAFLLWNAHTWLSHHFIAWGLLVLAGLEILACLVFAFGRLRRVPSIPMRGKHLDTLDTRDLGFIAFNKLATTLFSYHLLRFLWLSKGPAQVAWRVEEMTWQNTCLALPLLFVVYDFAYTLFHRALHHRALYKHIHKHHHRQKAPSRGNTDAVNVHPVEFVAGEYNHLAAIYLVSRFLLPVHALTALAFIVLGGFLASLNHTRFDIQTPGVLSSVYQVRFHDVHHWFPESNYGQYLMLWDYVFGSFKPYPEVKGAASGGGRGG 289          
BLAST of mRNA_L-elsbetiae_contig6165.14738.1 vs. uniprot
Match: A0A835Z0N4_9STRA (Fatty acid hydroxylase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0N4_9STRA)

HSP 1 Score: 234 bits (598), Expect = 1.600e-68
Identity = 140/325 (43.08%), Postives = 178/325 (54.77%), Query Frame = 2
Query:  332 GMLADVLLKGAGGAAFSLVNSGTWRWWHYPAWLSVILLGFEIMAALVHVLGRASRTASIRPRGKHLDEFEPLDRMFVAFNRCCTAVFTYHAIQYLWYGPWGGRVGWDISELGLSNGLGAFVALYVVYDXXXXXXXXXXXXXGLXXXXXXXXXRQKAPSRGNA----DAVNVHPFEFICGEYNHLLAL----------------------------------------HLVSRFVVPVHVVAAGAFIIAGGFLASLNHTRFDVRIPFLYEVRYHDIHHWFPDCNYGQYTMLWDWLMGSLKPYPV-EVGKDGSEENGGSRSKGIQAN 1171
            G+  ++LL+  G AAF L     W  WH   W+ V+L G E+++ L   LGRAS    I  RGKHLD  E  D  F+AFN+ CT +FTY  ++ +W  P G R+ W + +   +N +GA +ALYVV+D               XXXXXXXXX              DAVNV+PFEF+ GEYNHLLA+                                         LVSRFVVPVHV AA  F+IAGGF+ASLNHTR+DVR+  +Y+VRYHD+HHW+PDCN+GQYTMLWD   GS + +P    G   S +NG S     +AN
Sbjct:    4 GLAGELLLRLGGAAAFVLQGERQWEPWHIALWIVVLLAGLELLSVLTFALGRASGAKLIPHRGKHLDRLEATDVAFIAFNKLCTTLFTYQWLRVMWEQPLGMRMVWALGDADAANTVGATLALYVVFDLFYTLFHRALHHRSXXXXXXXXXXXXXXXXXXXXXXXXDAVNVYPFEFLSGEYNHLLAILRPIFXXXXXXXXXXXGGDDXXXXXXXXXXXXXXXXXXXXFLVSRFVVPVHVAAAAVFVIAGGFMASLNHTRYDVRVGSVYQVRYHDMHHWYPDCNFGQYTMLWDRAFGSFRHFPEGSEGVQFSYDNGTSSESPRKAN 328          
BLAST of mRNA_L-elsbetiae_contig6165.14738.1 vs. uniprot
Match: A0A7S4IH56_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IH56_9EUKA)

HSP 1 Score: 224 bits (572), Expect = 1.090e-65
Identity = 110/249 (44.18%), Postives = 152/249 (61.04%), Query Frame = 2
Query:  365 GGAAFSLVNSGTWRWWHYPAWLSVILLGFEIMAALVHVLGRASRTASIRP-RGKHLDEFEPLDRMFVAFNRCCTAVFTYHAIQYLWYGPWGGRVGWDISELGLSNGLGAFVALYVVYDXXXXXXXXXXXXXGLXXXXXXXXXRQKAPSRGNADAVNVHPFEFICGEYNHLLALHLVSRFVVPVHVVAAGAFIIAGGFLASLNHTRFDVRIPFLYEVRYHDIHHWFPDCNYGQYTMLWDWLMGSLKPYPV 1108
            G  AF +  S  W W+   AW+  I+   EI++ +V +   A    S+ P +GK LDE   +D  ++ FNR CT VFT+  IQ+ WY     +V W +  LG+ N LGA VA+++VYD             G+         RQ  P+RGN DA+NVHP EF+ GEYNHLL ++LVSR V+ +HV++   F++ G  LASLNHTRFD+++  L++V+YHDIHHW+P  N+GQYTMLWD + G  K YP 
Sbjct:   11 GAVAFIMFESQYWEWYQICAWVVGIIAALEILSRVVMI---AQPFFSVIPAKGKPLDELATIDLCYIWFNRLCTPVFTFQVIQFCWYSS---QVVWALDSLGILNTLGAMVAMFIVYDFFYAIYHRSLHIRGIYKYIHKHHHRQTVPTRGNVDAINVHPVEFVMGEYNHLLVMYLVSR-VIEIHVLSVLLFLLIGATLASLNHTRFDIQVSKLFQVKYHDIHHWYPYANFGQYTMLWDHVFGWFKDYPT 252          
BLAST of mRNA_L-elsbetiae_contig6165.14738.1 vs. uniprot
Match: A0A7S1U5D6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5D6_9STRA)

HSP 1 Score: 221 bits (562), Expect = 2.410e-64
Identity = 114/250 (45.60%), Postives = 149/250 (59.60%), Query Frame = 2
Query:  353 LKGAGGAAFSLVNSGTWRWWHYPAWLSVILLGFEIMAALVHVLGRASRTASIRPRGKHLDEFEPLDRMFVAFNRCCTAVFTYHAIQYLWYGPWGGRVGWDISELGLSNGLGAFVALYVVYDXXXXXXXXXXXXXGLXXXXXXXXXRQKAPSRGNADAVNVHPFEFICGEYNHLLALHLVSRFVVPVHVVAAGAFIIAGGFLASLNHTRFDVRIPFLYEVRYHDIHHWFPDCNYGQYTMLWDWLMGSLKPY 1102
            ++  G AA  L+ + TW W     +  V+L G E+++  V  L   S    I  +GKH D+    D+ F+AFN+    VFT+H + Y+W  P   +V W + +    N   A   LYVVYD              +          QKAPSRGN DAVNVHPFEF+CGEYNH+LAL +++ F+  VHV+AAG FI+AGG LASLNHTR+DV IP +Y+V+YHD+HH  P  NYGQY MLWD LMGS + Y
Sbjct:    4 MERIGAAAVELMEAETWSWPVRIGYTVVVLGGLELVSRFV--LTAFSGAEKIPIKGKHHDKLTTKDKCFIAFNKATVVVFTWHMLSYIWQNP---KVVWALEDATALNTAAAAALLYVVYDFFYTLFHRFLHVKAIYGYVHKHHHIQKAPSRGNVDAVNVHPFEFVCGEYNHILALFILTTFM-EVHVLAAGLFILAGGALASLNHTRYDVSIPGIYDVKYHDVHHRIPQSNYGQYIMLWDHLMGSFREY 247          
BLAST of mRNA_L-elsbetiae_contig6165.14738.1 vs. uniprot
Match: A0A7S2TQE1_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TQE1_9EUKA)

HSP 1 Score: 221 bits (562), Expect = 5.440e-64
Identity = 118/243 (48.56%), Postives = 152/243 (62.55%), Query Frame = 2
Query:  383 LVNSGTWRWWHYPAWLSVILLGFEIMAALVHVLGRASRTASIRPRGKHLDEFEPLDRMFVAFNRCCTAVFTYHAIQYLWYGPWGGRVGWDISELGLSNGLGAFVALYVVYDXXXXXXXXXXXXXGLXXXXXXXXXRQKAPSRGNADAVNVHPFEFICGEYNHLLALHLVSRFVVPVHVVAAGAFIIAGGFLASLNHTRFDVRIPFLYEVRYHDIHHWFPDCNYGQYTMLWDWLMGSLKPYPVE 1111
            L ++ TW WWH+  +  VI LG E++  LV  +   S    I  RGKHLDEFE +D  F+ FN+    VFTYH I++ +       + WDI +LG+ NG  + VA+++VYD          X    XXXXX    RQ+AP+RGN DA+NVHPFEF+ GEY HL+A  LVSR V+ +HV A   F+  GG LASLNHTR+D+    +Y V+ HD+HH  P+ NYGQY MLWD LMGS KPY  E
Sbjct:   30 LHDASTWEWWHFAGFALVIYLGLELLNVLV--INAFSSANQIPIRGKHLDEFEFIDNAFIQFNKLAIIVFTYHMIRFTFTAK---NICWDIRDLGILNGPSSLVAMHIVYDFFYTLFHRFLXNRXXXXXXXKHHHRQRAPTRGNLDAINVHPFEFVVGEYIHLVAAFLVSR-VMTIHVGAIAWFVAVGGLLASLNHTRYDLSFLGVYSVKVHDVHHRLPESNYGQYIMLWDKLMGSYKPYTTE 266          
BLAST of mRNA_L-elsbetiae_contig6165.14738.1 vs. uniprot
Match: A0A7S0GVS8_9EUKA (Hypothetical protein n=2 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GVS8_9EUKA)

HSP 1 Score: 218 bits (554), Expect = 6.730e-63
Identity = 112/249 (44.98%), Postives = 154/249 (61.85%), Query Frame = 2
Query:  377 FSLVNSGTWRWWHYPAWLSVILLGFEIMAALVHVLGRASRTASIRPRGKHLDEFEPLDRMFVAFNRCCTAVFTYHAIQYLWYGPWGGRVGWDISELGLSNGLGAFVALYVVYDXXXXXXXXXXXXXGLXXXXXXXXXRQKAPSRGNADAVNVHPFEFICGEYNHLLALHLVSRFVVPVHVVAAGAFIIAGGFLASLNHTRFDVRIPFLYEVRYHDIHHWFPDCNYGQYTMLWDWLMGSLKPYPVEVGKD 1123
            F +   GTW+ WH+  +  VI LG EI++ +V ++ + ++T  I  RGKHLD FE +D +++  N+  TAVF YH ++Y+        V WDI  L + N   + V +++VYD              L         RQ+AP+RGN DA+NVHPFEF+ GEY HLLA HLV++++V VH+VA   F++ GG LASLNHTRFD     +Y V+ HD+HH  P+ NYGQY MLWD +MGS KPY VE  K+
Sbjct:   25 FVIHQPGTWQVWHFGVFSVVIYLGMEILSHIVPLVFQ-NKTNLIPMRGKHLDVFETVDHVYININKIATAVFVYHMLKYVN----AANVEWDIGGLSVVNFPVSVVLMHIVYDFFYTIFHRVLHNRQLYRFVHKHHHRQRAPTRGNLDAINVHPFEFVVGEYLHLLAAHLVTKYLVKVHIVAIAWFVVVGGILASLNHTRFDFSFLGIYSVKVHDVHHRLPESNYGQYIMLWDKIMGSYKPY-VEPKKE 267          
BLAST of mRNA_L-elsbetiae_contig6165.14738.1 vs. uniprot
Match: A0A061SG51_9CHLO (C-5 sterol desaturase n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SG51_9CHLO)

HSP 1 Score: 217 bits (552), Expect = 2.510e-62
Identity = 118/275 (42.91%), Postives = 157/275 (57.09%), Query Frame = 2
Query:  365 GGAAFSLVNSGTW----------RWWHYPAWLSVILLGFEIMAALVHVLGRA-------SRTASIRPRGKHLDEFEPLDRMFVAFNRCCTAVFTYHAIQYLWYGPWGGRVGWDISELGLSNGLGAFVALYVVYDXXXXXXXXXXXXXGLXXXXXXXXXRQKAPSRGNADAVNVHPFEFICGEYNHLLALHLVSRFVVPVHVVAAGAFIIAGGFLASLNHTRFDVR---IPFLYEVRYHDIHHWFPDCNYGQYTMLWDWLMGSLKPYPVEVGKDGS 1129
            GG  F  V+S  +           WW Y  +   ++L  E+++A V  +G           T  I  RG+HLD  E  D +F+AFNR  T VFT+HA+Q+LW  P   RV W   +   ++ L A  A++VVYD              +         RQ APSRGN DAVNVHPFEF+ GEYNHL A+  VSR  VPVH  AA  FI++GG LASLNHTR D+    +P+L++V+YHD+HHW P  N+GQYTM+WD++  S + YP E G++ S
Sbjct:    9 GGFLFKAVSSAIFFADKLFSLGGEWWMYALFGLAVVLAMELLSASVPRIGSVILTLQGRRNTGLIPARGRHLDALEATDYVFIAFNRLTTPVFTFHAMQFLWQSP---RVVWGARDATAASVLLALAAMFVVYDSTYCLFHRALHHRSVYKHVHKHHHRQMAPSRGNVDAVNVHPFEFLPGEYNHLFAIWAVSR-AVPVHAGAALLFIVSGGVLASLNHTRLDIASPVLPWLFKVKYHDVHHWDPSVNFGQYTMIWDYVFRSFRAYPGEGGREPS 279          
BLAST of mRNA_L-elsbetiae_contig6165.14738.1 vs. uniprot
Match: A0A7S0W795_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W795_9CRYP)

HSP 1 Score: 213 bits (543), Expect = 2.920e-61
Identity = 115/247 (46.56%), Postives = 152/247 (61.54%), Query Frame = 2
Query:  371 AAFSLVNSGTWRWWHYPAWLSVILLGFEIMAALVHVLGRASRTASIRPRGKHLDEFEPLDRMFVAFNRCCTAVFTYHAIQYLWYGPWGGRVGWDISELGLSNGLGAFVALYVVYDXXXXXXXXXXXXXGLXXXXXXXXXRQKAPSRGNADAVNVHPFEFICGEYNHLLALHLVSRFVVPVHVVAAGAFIIAGGFLASLNHTRFDVRIPFLYEVRYHDIHHWFPDCNYGQYTMLWDWLMGSLKPYPVE 1111
            AAF   ++ TW    Y +W +VI+LG EI+A LV  + +   T  +  RG HLD     D  F+ +N+ CTAVFTYHA+++ WY      V W + EL L N + A   L+VVYD              +   XXXXXX Q APSRG ADAVNVHPFEF+CGEY HLLA+     F+VP H++ A  F++ GG +ASLNHTRF+V +  +++V++HD HH  P  NYGQY MLWD++ G+   YP E
Sbjct:   27 AAFKFWDASTWTPLQYLSWCTVIVLGLEIVAWLVSNIPKLFNTVILPKRGSHLDVLTSKDIAFICWNKFCTAVFTYHALRFCWYSK---TVKWGLDELTLLNTVVALGGLFVVYDFFYHIFHRALHLRSVYKYXXXXXXNQHAPSRGTADAVNVHPFEFVCGEYCHLLAI-----FLVPCHIMTAALFVVGGGVVASLNHTRFNVSLLNVFDVKFHDQHHVVPTVNYGQYIMLWDYVFGTYHEYPHE 265          
BLAST of mRNA_L-elsbetiae_contig6165.14738.1 vs. uniprot
Match: A0A482SFA9_9ARCH (Fatty acid hydroxylase family protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SFA9_9ARCH)

HSP 1 Score: 210 bits (534), Expect = 5.860e-60
Identity = 109/270 (40.37%), Postives = 152/270 (56.30%), Query Frame = 2
Query:  314 SWVLADGMLADVLLKGAGGAAFSLVNSGTWRWWH---YPAWLSVILLGFEIMAALVHVLGRASRTASIRPRGKHLDEFEPLDRMFVAFNRCCTAVFTYHAIQYLWYGPWGGRVGWDISELGLSNGLGAFVALYVVYDXXXXXXXXXXXXXGLXXXXXXXXXRQKAPSRGNADAVNVHPFEFICGEYNHLLALHLVSRFVVPVHVVAAGAFIIAGGFLASLNHTRFDVRIPFLYEVRYHDIHHWFPDCNYGQYTMLWDWLMGSLKPYPVEV 1114
            SW+LA+  +    L G     F+ ++   +  W     P +  VI++G EI++ +V ++  ++ +  I  + KHLDEF   D +F+  N+  T+ F YH +   +Y P    + W  SE  +SN LG+ V  Y+ YD              L         RQKAPSRGN DA+NVHPFEF  GEY     LHLV+ + +P H+ A   FII GG LASLNHTR+D+ IP LY V+ HD+HH  P+ NYGQY MLWD+L GS +PY  ++
Sbjct:    3 SWLLAEKSVQTRELSGIMAEKFAELHEWDFSQWSASILPGFCIVIVVGMEILSHIVPIVFGSTTSGRIPIKAKHLDEFSSTDTLFIWINKLLTSFFVYHLLYVCYYSP---TIKWQWSEATMSNTLGSLVLFYIFYDFFYMNFHRILHIKELYSIIHKHHHRQKAPSRGNLDAINVHPFEFFVGEY-----LHLVTVYFIPCHMYAVAFFIIVGGVLASLNHTRYDIVIPGLYSVKVHDVHHRLPESNYGQYIMLWDYLFGSYRPYGTKI 264          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6165.14738.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2Q4_ECTSI1.110e-14674.92Fatty acid hydroxylase domain-containing protein n... [more]
A0A4D9CVT2_9STRA1.570e-8349.45Fatty acid hydroxylase domain-containing protein n... [more]
A0A835Z0N4_9STRA1.600e-6843.08Fatty acid hydroxylase domain-containing protein n... [more]
A0A7S4IH56_9EUKA1.090e-6544.18Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A7S1U5D6_9STRA2.410e-6445.60Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2TQE1_9EUKA5.440e-6448.56Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S0GVS8_9EUKA6.730e-6344.98Hypothetical protein n=2 Tax=Amorphochlora amoebif... [more]
A0A061SG51_9CHLO2.510e-6242.91C-5 sterol desaturase n=2 Tax=Tetraselmis sp. GSL0... [more]
A0A7S0W795_9CRYP2.920e-6146.56Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A482SFA9_9ARCH5.860e-6040.37Fatty acid hydroxylase family protein (Fragment) n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6165contigL-elsbetiae_contig6165:4652..6818 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score438.3
Seed ortholog evalue2.9e-120
Seed eggNOG ortholog2880.D7G2Q4
KEGG rclassRC00904
KEGG koko:K00227
KEGG ReactionR07215,R07486,R07491,R07505
KEGG Pathwayko00100,ko01100,ko01110,ko01130,map00100,map01100,map01110,map01130
KEGG ModuleM00101,M00102
Hectar predicted targeting categoryother localisation
EggNOG free text desc.C-5 sterol desaturase activity
EggNOG OGsCOG3000@1,KOG0872@2759
EC1.14.19.20
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Ec32 ortholog descriptionFatty acid hydroxylase
Ec32 orthologEc-11_003100.1
Exons2
Model size1811
Cds size915
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6165.14738.1prot_L-elsbetiae_contig6165.14738.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6165 5238..6508 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816674.9920824-UTR-L-elsbetiae_contig6165:4651..52371622816674.9920824-UTR-L-elsbetiae_contig6165:4651..5237Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6165 4652..5237 -
1691683730.9902515-UTR-L-elsbetiae_contig6165:4651..52371691683730.9902515-UTR-L-elsbetiae_contig6165:4651..5237Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6165 4652..5237 -
1622816675.0298429-UTR-L-elsbetiae_contig6165:6508..68181622816675.0298429-UTR-L-elsbetiae_contig6165:6508..6818Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6165 6509..6818 -
1691683731.0293815-UTR-L-elsbetiae_contig6165:6508..68181691683731.0293815-UTR-L-elsbetiae_contig6165:6508..6818Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6165 6509..6818 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816675.0045798-CDS-L-elsbetiae_contig6165:5237..54561622816675.0045798-CDS-L-elsbetiae_contig6165:5237..5456Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6165 5238..5456 -
1691683731.0069487-CDS-L-elsbetiae_contig6165:5237..54561691683731.0069487-CDS-L-elsbetiae_contig6165:5237..5456Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6165 5238..5456 -
1622816675.0159962-CDS-L-elsbetiae_contig6165:5812..65081622816675.0159962-CDS-L-elsbetiae_contig6165:5812..6508Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6165 5813..6508 -
1691683731.019307-CDS-L-elsbetiae_contig6165:5812..65081691683731.019307-CDS-L-elsbetiae_contig6165:5812..6508Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6165 5813..6508 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6165.14738.1

>prot_L-elsbetiae_contig6165.14738.1 ID=prot_L-elsbetiae_contig6165.14738.1|Name=mRNA_L-elsbetiae_contig6165.14738.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=305bp
MSWVLADGMLADVLLKGAGGAAFSLVNSGTWRWWHYPAWLSVILLGFEIM
AALVHVLGRASRTASIRPRGKHLDEFEPLDRMFVAFNRCCTAVFTYHAIQ
YLWYGPWGGRVGWDISELGLSNGLGAFVALYVVYDLFYTVFHRVLHLRGL
YKHVHKHHHRQKAPSRGNADAVNVHPFEFICGEYNHLLALHLVSRFVVPV
HVVAAGAFIIAGGFLASLNHTRFDVRIPFLYEVRYHDIHHWFPDCNYGQY
TMLWDWLMGSLKPYPVEVGKDGSEENGGSRSKGIQANVAALADSAAAENK
EKTG*
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mRNA from alignment at L-elsbetiae_contig6165:4652..6818-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6165.14738.1 ID=mRNA_L-elsbetiae_contig6165.14738.1|Name=mRNA_L-elsbetiae_contig6165.14738.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2167bp|location=Sequence derived from alignment at L-elsbetiae_contig6165:4652..6818- (Laminarionema elsbetiae ELsaHSoW15)
GCGCAGCAGAGAGAGGCGCACCCAGTTATCTCGCCAAGAGTAGAGGCGAC CATAGAGAAGTGAAGCAAGAAAAGTCTCTGTGTGTTGGCACGGCACGACA GCATCAGCGCAAAATAGACGAAGACCAAGGTCGCTCGTTCCAAAGAACGC GCTGTTCTGTACAAGAGAAGAGTTACATAGGACGGGCGCTGGACCTGCAT CAAGCAACGAGCAGGCGAGCAGTAAGCCGCTAATTGTTTCAGGGTGCTTC GAAGGGACGAACAGAAAGCAATTATCTGAGGCTTCTTGCATTTCGAGCTA GATAACGCGTATGTCGTGGGTTTTAGCGGACGGGATGCTGGCGGATGTTC TGCTCAAGGGAGCAGGAGGAGCAGCATTCTCCCTCGTCAACTCCGGCACC TGGCGATGGTGGCACTACCCGGCCTGGTTGTCCGTCATCCTGCTGGGCTT CGAGATCATGGCAGCACTGGTACATGTCTTGGGCCGGGCATCTAGGACCG CCAGCATCCGTCCTCGCGGGAAGCACCTGGACGAGTTTGAACCGTTAGAC AGGATGTTCGTCGCGTTCAACCGCTGCTGCACCGCGGTCTTCACATACCA CGCCATCCAGTACCTTTGGTACGGTCCTTGGGGCGGGCGAGTTGGCTGGG ACATCTCGGAGCTGGGGCTGTCGAACGGGCTGGGCGCCTTCGTGGCGCTG TACGTAGTGTACGACCTTTTCTACACGGTGTTTCACAGGGTGTTGCATCT CCGGGGTCTGTACAAGCACGTGCACAAGCACCACCACCGGCAGAAGGCGC CGTCGCGAGGCAACGCCGACGCCGTCAACGTGCACCCGTTCGAGTTCATA TGCGGGGAGTACAACCATCTCCTGGCGCTTCACCTGGTCTCGAGGTTCGT GGTGCCCGTGCACGTGGTGGCGGCCGGCGCCTTCATCATCGCGGGAGGGT TCTTGGCGTCGCTCAACCACACCCGGTTCGACGTCCGCATCCCGTTCTTG TACGAGGTGAGTCACGGGTCACTGGTCCAGTGCCTTGGGTTGCTCTCTTT GCTCTTGAGATGGTATCATTTAAACGAGCCTGTACATATGGCTGAGGTTT TTGAATTCTGCTGGTTTCGTATAACAAGGAGAGGGGTGGTGGTTGTTGTC GCCTGCCTGCCCTACGCGTCTTGTGTTTCCGCCAGTTGATGAACGTCGAC ATCATTTCGCGTGGTCGATCGGCACGACAGTAGACGGCGCTCTATAGGGT TGCAGATATGCCTCCCTGCTGATATGTACATGTGCCAGGATCTGCGCGCC CTCCCTGCACCATGCTCAACATTGACATTGGTTCCATTGCCTCGTTTCTG CGCGTGCCACAGGTGCGGTATCACGACATCCACCACTGGTTTCCTGACTG CAATTACGGGCAGTACACCATGTTGTGGGATTGGTTGATGGGGAGTTTGA AGCCTTATCCCGTAGAAGTAGGCAAGGATGGCAGTGAAGAGAACGGCGGC AGCAGAAGTAAAGGTATTCAAGCAAACGTCGCAGCTCTAGCTGACAGTGC AGCTGCAGAAAACAAAGAGAAAACGGGCTAACGAAGCAGCAGTAGTGTCA GGAGCTGGGCGGTGCTGCTAGAGTTGCAGTCCCGGACTCGTGGTGGACGC CTAGTGTTGGTCTTGTTTTTTGCGTTGGAATATACTGCACGAGCGTGCTG GCTTTTCTTCGCGGTTTGTGTCGTGATGTCGAAAGTTACGGTGGTAAAAT TTTATTGCATTGCGTGTGTTCTTGTGTAGTTTTGCGTCGCGGCGAACCTT AACCTCTCACGCGAAATTTTGAGGCACTCTATGCGCAAGGAGCTGCATAG AGCTGCATGGCTGTACTATGCAAATATTAGTGTTTACCCTGCTTGTGGCT TTCTGGAGTTCGCGCGATCTCGTTGTACGAAGTATTTGTTTTGGGAGTCT ATTTAGTAGTCTGCGCGCAGAGTTCTGGTAGCGCCTATTTAGTAATGTGC CCTCACATCCATCACCTCTCGAAAAATCGAAAAACAAAAGTAGCTATTTT AGGCGCGCTATTGTACGGAGAGCAGCATGCACATTTCTGTACGGGTTGTG CGCCACACTTGGCAGTTCTGAGCCATGAGTCGAGAACACTCTCAGGGTAC GTCATCGTGTAACTTCT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6165:4652..6818-

>mRNA_L-elsbetiae_contig6165.14738.1 ID=mRNA_L-elsbetiae_contig6165.14738.1|Name=mRNA_L-elsbetiae_contig6165.14738.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1830bp|location=Sequence derived from alignment at L-elsbetiae_contig6165:4652..6818- (Laminarionema elsbetiae ELsaHSoW15)
ATGTCGTGGGTTTTAGCGGACGGGATGCTGGCGGATGTTCTGCTCAAGGG
AGCAGGAGGAGCAGCATTCTCCCTCGTCAACTCCGGCACCTGGCGATGGT
GGCACTACCCGGCCTGGTTGTCCGTCATCCTGCTGGGCTTCGAGATCATG
GCAGCACTGGTACATGTCTTGGGCCGGGCATCTAGGACCGCCAGCATCCG
TCCTCGCGGGAAGCACCTGGACGAGTTTGAACCGTTAGACAGGATGTTCG
TCGCGTTCAACCGCTGCTGCACCGCGGTCTTCACATACCACGCCATCCAG
TACCTTTGGTACGGTCCTTGGGGCGGGCGAGTTGGCTGGGACATCTCGGA
GCTGGGGCTGTCGAACGGGCTGGGCGCCTTCGTGGCGCTGTACGTAGTGT
ACGACCTTTTCTACACGGTGTTTCACAGGGTGTTGCATCTCCGGGGTCTG
TACAAGCACGTGCACAAGCACCACCACCGGCAGAAGGCGCCGTCGCGAGG
CAACGCCGACGCCGTCAACGTGCACCCGTTCGAGTTCATATGCGGGGAGT
ACAACCATCTCCTGGCGCTTCACCTGGTCTCGAGGTTCGTGGTGCCCGTG
CACGTGGTGGCGGCCGGCGCCTTCATCATCGCGGGAGGGTTCTTGGCGTC
GCTCAACCACACCCGGTTCGACGTCCGCATCCCGTTCTTGTACGAGATGT
CGTGGGTTTTAGCGGACGGGATGCTGGCGGATGTTCTGCTCAAGGGAGCA
GGAGGAGCAGCATTCTCCCTCGTCAACTCCGGCACCTGGCGATGGTGGCA
CTACCCGGCCTGGTTGTCCGTCATCCTGCTGGGCTTCGAGATCATGGCAG
CACTGGTACATGTCTTGGGCCGGGCATCTAGGACCGCCAGCATCCGTCCT
CGCGGGAAGCACCTGGACGAGTTTGAACCGTTAGACAGGATGTTCGTCGC
GTTCAACCGCTGCTGCACCGCGGTCTTCACATACCACGCCATCCAGTACC
TTTGGTACGGTCCTTGGGGCGGGCGAGTTGGCTGGGACATCTCGGAGCTG
GGGCTGTCGAACGGGCTGGGCGCCTTCGTGGCGCTGTACGTAGTGTACGA
CCTTTTCTACACGGTGTTTCACAGGGTGTTGCATCTCCGGGGTCTGTACA
AGCACGTGCACAAGCACCACCACCGGCAGAAGGCGCCGTCGCGAGGCAAC
GCCGACGCCGTCAACGTGCACCCGTTCGAGTTCATATGCGGGGAGTACAA
CCATCTCCTGGCGCTTCACCTGGTCTCGAGGTTCGTGGTGCCCGTGCACG
TGGTGGCGGCCGGCGCCTTCATCATCGCGGGAGGGTTCTTGGCGTCGCTC
AACCACACCCGGTTCGACGTCCGCATCCCGTTCTTGTACGAGGTGCGGTA
TCACGACATCCACCACTGGTTTCCTGACTGCAATTACGGGCAGTACACCA
TGTTGTGGGATTGGTTGATGGGGAGTTTGAAGCCTTATCCCGTAGAAGTA
GGCAAGGATGGCAGTGAAGAGAACGGCGGCAGCAGAAGTAAAGGTATTCA
AGCAAACGTCGCAGCTCTAGCTGACAGTGCAGCTGCAGAAAACAAAGAGA
AAACGGGCTAAGTGCGGTATCACGACATCCACCACTGGTTTCCTGACTGC
AATTACGGGCAGTACACCATGTTGTGGGATTGGTTGATGGGGAGTTTGAA
GCCTTATCCCGTAGAAGTAGGCAAGGATGGCAGTGAAGAGAACGGCGGCA
GCAGAAGTAAAGGTATTCAAGCAAACGTCGCAGCTCTAGCTGACAGTGCA
GCTGCAGAAAACAAAGAGAAAACGGGCTAA
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