mRNA_L-elsbetiae_contig6163.14736.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6163.14736.1 vs. uniprot
Match: D7G2H5_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2H5_ECTSI) HSP 1 Score: 207 bits (528), Expect = 7.670e-58 Identity = 123/268 (45.90%), Postives = 158/268 (58.96%), Query Frame = 1 Query: 454 SPGAFVFMLKDGSAAASSDFQPAKWSTRSRQMATHYI-GPKVTPHYGPGGLKVIRWQKCTCIITTGSNPFRVPDDSSFLDLNGKRATEIEVYEVVPEGIA-SPPAKRSRRSSGHEVLLVDQTSIPAPSALSAQEASDDLRNFGALIASPLMEEHTALFHAQTELVQASDRASASAKALAAVYGPRVAAGMRDGVVELSVRGIRMTTLRSTLQACSKSALAARFDPEKWPASGKDLDEHGRQVVDCRHSCFSKLLDVLRMRERAAWAGS 1251 S GAF+FMLKD + FQP KW R + G P++G L V + + VP S+F +LNG+ TEIEV++V S P+KR + + TS + +++EA+ D FG IA LMEE AL A+ EL QA +A+AS ALAAVYGP VA G D VVELSVRG RMTTLRSTLQAC +SALAA F+ +KWP + KD+DE GR++++C + F K+LDVLRMR+RAAWA S Sbjct: 246 SLGAFIFMLKDSDMGGPNSFQPVKWGKRDNNGGCDVVVGASRGPYFGRTDLVVNFNNYFPVTLQAQPYSYDVPSGSTFPNLNGQTITEIEVFQVYSAAATTSSPSKRLKIQGPEDTHGAVSTSS---TNTASREANSDAETFGNAIAGALMEERIALHQAEAELEQAHSKAAASGDALAAVYGPEVARGAIDTVVELSVRGTRMTTLRSTLQACRESALAALFNEDKWPPTDKDVDEQGRRLINCSPAVFQKVLDVLRMRKRAAWAAS 510
BLAST of mRNA_L-elsbetiae_contig6163.14736.1 vs. uniprot
Match: D7FIX7_ECTSI (BTB_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX7_ECTSI) HSP 1 Score: 206 bits (525), Expect = 1.110e-57 Identity = 118/267 (44.19%), Postives = 156/267 (58.43%), Query Frame = 1 Query: 454 SPGAFVFMLKDGSAAASSDFQPAKWSTRSRQMA-THYIGPKVTPHYGPGGLKVIRWQKCTCIITTGSNPFRVPDDSSFLDLNGKRATEIEVYEVVPEGIASPPAKRSRRSSGHEVLLVDQTSIPAPSALSAQEASDDLRNFGALIASPLMEEHTALFHAQTELVQASDRASASAKALAAVYGPRVAAGMRDGVVELSVRGIRMTTLRSTLQACSKSALAARFDPEKWPASGKDLDEHGRQVVDCRHSCFSKLLDVLRMRERAAWAGS 1251 SPGAF+FMLKDG S +Q KW + + A Y G P +G G + W + TG+ + P S F +LNG R ++E + V P+ P + + + + D+T AP + +DD+R+FG L+A LMEE L A EL A R A A A+AAVYGP VA G D VVEL+VRG RMTTLRSTL+ C SALAA F+ E+WP + KDLD +GR+++DC+ S FSK+LDVLR+ +RAAWA S Sbjct: 217 SPGAFLFMLKDGEGRHSGVYQSTKWGVKDGRSAYAVYRGQGYGPCFGEGRDLHVVWNGTESAVRTGNQTYHAPTGSPFPELNGCRLVDVETFRVGPK-----PNTPTSSTKQEDHAVEDKTGPGAP-----VKTADDVRSFGDLVADSLMEEEKLLQEAANELSLAKARTMACATAVAAVYGPEVATGTEDDVVELNVRGTRMTTLRSTLRICPDSALAAWFNEEQWPVAEKDLDSNGRRIIDCKPSVFSKVLDVLRIAKRAAWARS 473
BLAST of mRNA_L-elsbetiae_contig6163.14736.1 vs. uniprot
Match: A0A6H5LAP0_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAP0_9PHAE) HSP 1 Score: 201 bits (511), Expect = 3.550e-55 Identity = 121/265 (45.66%), Postives = 154/265 (58.11%), Query Frame = 1 Query: 454 SPGAFVFMLKDGSAAASSDFQPAKWSTRSRQMATHYIGPKVTPHYGPGGLKVIRWQKCTCIITTGSNPFRVPDDSSFLDLNGKRATEIEVYEVVPEGIASPPAKRSRRSSGHEVLLVDQTSIPAPSALSAQEASDDLRNFGALIASPLMEEHTALFHAQTELVQASDRASASAKALAAVYGPRVAAGMRDGVVELSVRGIRMTTLRSTLQACSKSALAARFDPEKWPASGKDLDEHGRQVVDCRHSCFSKLLDVLRMRERAAWAG 1248 SPGAFVF+LKD SS F P KW ++ +A + P +G LKV W + T ++ + VP S FL LNG+ +IE + V + + P + +G + T+ P SDD+ FG LIA LME L A EL A R +A A ALAAVYGP VA+G ++ VVELSVRG MTTLRSTL+ C SALAARFD KWPA+ KDLD GR+++DCR + FSK+LDVLR+ +RAAWAG Sbjct: 278 SPGAFVFILKD-EGKGSSTFPPMKWGVKNG-LAAKAVNQGCGPCFGECDLKV-NWNGNMSTVGTDNSTYDVPAGSHFLQLNGRHLLDIEAFRVCSKPTHTLPLAKQEHRAG------EGTNTPTAPV----RTSDDVPTFGQLIADSLMEAEMVLQDAGIELALAKARTTACATALAAVYGPDVASGQQEDVVELSVRGTAMTTLRSTLRVCPDSALAARFDEGKWPAAKKDLDSDGRRMIDCRPAVFSKVLDVLRIAKRAAWAG 529
BLAST of mRNA_L-elsbetiae_contig6163.14736.1 vs. uniprot
Match: D7FIV0_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV0_ECTSI) HSP 1 Score: 187 bits (476), Expect = 1.860e-50 Identity = 124/271 (45.76%), Postives = 162/271 (59.78%), Query Frame = 1 Query: 466 FVFMLKDGSAAASSDFQPAKWSTRSR--QMATHYIGPKVTPHYGPG---GLKVIRWQKCTCIITTGSNPFRVPDDSSFLDLNGKRATEIEVYEVVPEGIASPPAKRSRRSSGHEVLLVDQTSIPAPSALSAQEASDDLRNFGALIASPLMEEHTALFHAQTELVQASDRASASAKALAAVYGPRVAAGMRDGVVELSVRGIR----MTTLRSTLQACSKSALAARFDPEKWPASGKDLDEHGRQVV-DCRHSCFSKLLDVLRMRERAAWAG 1248 F+F+LKDG S +FQPA W R R + + Y K +G G L V+ W T + G+ + VP F+ L G+ ++EV+ V + + + P + L+D + SA+SA+E +D+ FG IA L +E AL AQ ELVQA+ A+AS KALAAVYGP AAG++D +VELSVRG R MTTL STLQAC +SALAARFD KWP + KD D HGR+V+ DC S FSK+LDVLRM++R AWAG Sbjct: 230 FLFILKDG-IEESHNFQPAIWGLRIRNPKPSGAYDMEKFGLIFGRGRIFDLSVV-WTNQT--LVAGNQVYAVPPGFQFIRLGGRAIADVEVFRV-RQTMGTLPTTPPTVTG-----LIDCAAYFEASAMSAEEHENDVYRFGTSIAGSLKDERAALHTAQRELVQANTMAAASLKALAAVYGPHTAAGVKDPIVELSVRGSRTTERMTTLLSTLQACPESALAARFDEAKWPVTEKDKDAHGRRVMKDCSPSVFSKVLDVLRMKKREAWAG 490
BLAST of mRNA_L-elsbetiae_contig6163.14736.1 vs. uniprot
Match: A0A6H5L232_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L232_9PHAE) HSP 1 Score: 181 bits (458), Expect = 6.900e-48 Identity = 111/267 (41.57%), Postives = 142/267 (53.18%), Query Frame = 1 Query: 454 SPGAFVFMLKDGSAAASSDFQPAKWSTRSRQMATHYI-GPKVTPHYGPGGLKVIRWQKCTCIITTGSNPFRVPDDSSFLDLNGKRATEIEVYEVVPEGIASPPAKRSRRSSGHEVLLVDQTSIPAPSALSAQEASDDLRNFGALIASPLMEEHTALFHAQTELVQASDRASASAKALAAVYGPRVAAGMRDGVVELSVRGIRMTTLRSTLQACSKSALAARFDPEKWPASGKDLDEHGRQVVDCRHSCFSKLLDVLRMRERAAWAGS 1251 S GAF+FMLKD + FQP KWS R + G P +G L V+ + + + VP +F +LNG+ TEIEV++V N IA LMEE AL+ A+ EL A +A+ S +ALAAVYGP VA G D VVELSVRG RMTTLRSTL+AC +SALAA F+ +KWPA+ KD+DE GR++++C + F K+LDVLRMR+RAAWA S Sbjct: 268 SLGAFIFMLKDSDMGGPNSFQPVKWSKRDNNGGYDVVVGASRGPFFGRTDL-VVNFTYVPVTLQAQPYSYDVPSVPAFPNLNGQTITEIEVFQV---------------------------------------------NICNAIAGALMEERIALYQAEAELEHAHSKAAVSGRALAAVYGPEVARGAIDTVVELSVRGTRMTTLRSTLRACRESALAALFNEDKWPATDKDVDEQGRRLINCSPAVFQKVLDVLRMRKRAAWAAS 488
BLAST of mRNA_L-elsbetiae_contig6163.14736.1 vs. uniprot
Match: A0A6H5JCR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCR8_9PHAE) HSP 1 Score: 180 bits (457), Expect = 8.200e-48 Identity = 118/271 (43.54%), Postives = 155/271 (57.20%), Query Frame = 1 Query: 454 SPGAFVFMLKDGSAAASSDFQPAKWSTRSRQMATHYIGPKVTPHY-GPGGLKVIRWQKCTC-IITTGSNPFRVPDDSSFLDLNGKRATEIEVYEVVPEGIASPPAKRSRRSSGHEVLLVDQTSIPAPSALSAQEASDDLRNFGALIASPLMEEHTALFHAQTELVQASDRASASAKALAAVYGPRVAAGMRDGVVELSVRGIR----MTTLRSTLQACSKSALAARFDPEKWPASGKDLDEHGRQVV-DCRHSCFSKLLDVLRMRERAAWA 1245 SPG+F+FMLKDG+ S QP+KW + Y G V GP + W C + T + +P + FL G+ +IEV+ V+P + L+D + S +SA+E +D+ FG IA L +E AL AQ ELV+A+ A+AS +ALAAVYGP +AAG+ D VVELSVRG R MTTL STLQAC +SALAARFD KWP + K+ D HGR+V+ DC F+K+LDVLRM++R AWA Sbjct: 235 SPGSFLFMLKDGNEG-SDAVQPSKWGPK-----VGYTGQVVDGRTEGP-----VDWVMCLHRMFTVHCGIYDIPTEHPFLYHMGREVVDIEVFRVLPTSLTVTG-------------LIDCAAYFKCSDMSAEEHENDVYRFGMSIAGSLRDERAALHTAQRELVKANTIAAASVEALAAVYGPNIAAGVEDRVVELSVRGPRKTERMTTLLSTLQACPESALAARFDEAKWPVTDKEKDAHGRRVIKDCSPLVFAKVLDVLRMKKREAWA 481
BLAST of mRNA_L-elsbetiae_contig6163.14736.1 vs. uniprot
Match: D7FIX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX5_ECTSI) HSP 1 Score: 162 bits (410), Expect = 3.480e-42 Identity = 109/275 (39.64%), Postives = 148/275 (53.82%), Query Frame = 1 Query: 445 RALSPGAFVFMLKDGSAAASSDFQPAKWSTRSRQMATHYI------GPKVTPHYGPGGLKVIRWQKCTCIITTGSNPFRVPDDSSFLDLNGKRATEIEVYEV--VPEGIASPPAKRSRRSSGHEVLLVDQTSIPAPSALSAQEASDDLRNFGALIASPLMEEHTALFHAQTELVQASDRASASAKALAAVYGPRVAAGMRDGVVELSVRGIRMTTLRSTLQACSKSALAARFDPEKWPASGKDLDEHGRQVVDCRHSCFSKLLDVLRMRERAAWA 1245 R S AF+FML DF+P KW +S P +G ++V C ++TG + V +S+FL LNG ++EV+EV VPE + +P + E++ DQ IP +L+A+ + FG IA LMEE AL +A+ EL +A+ RA A+AL +YGP VA G D VVEL+VRG +TTL TL AC+ S AA E+W + GK +DE GR V+C SCFSK+LDV+RMR+RA WA Sbjct: 89 RRWSNSAFIFMLDSPE----EDFEPVKWGVKSGSQGNALSCCRDSSSQSFRPCFGNHDMRVDFHPTTGCTLSTGRGTYDVDGESTFLALNGGLVLDVEVFEVRSVPEQVETPASS--------EIMSWDQH-IPVDQSLAAEYTLE----FGESIADLLMEELMALAYARVELDEAAARARTVARALCVIYGPHVARGEEDPVVELNVRGRSITTLYWTLHACTDSVFAAWL-AERW-SGGKGVDEDGRYKVNCDPSCFSKILDVMRMRKRAGWA 344
BLAST of mRNA_L-elsbetiae_contig6163.14736.1 vs. uniprot
Match: A0A6H5KTF6_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTF6_9PHAE) HSP 1 Score: 155 bits (391), Expect = 4.840e-39 Identity = 105/227 (46.26%), Postives = 129/227 (56.83%), Query Frame = 1 Query: 454 SPGAFVFMLKDGSAAASSDFQPAKWSTRSRQMATHYIGPKVTPHYGP---GGLKVIRWQKCTCIITTGSNPFRVPDDSSFLDLNGKRATEIEVYEVVPEGIAS--PPAKRSRRSSGHEVLLVDQTSIPAPSALSAQEASDDLRNFGALIASPLMEEHTALFHAQTELVQASDRASASAKALAAVYGPRVAAGMRDGVVELSVRGIRMTTLRSTLQACSKSALAARFD 1119 SP AF+ M+K GSA SS FQP+KW R + +Y+G T +GP L + + F V +DS+F L G+ EIEV+ V E A PP R++ ++ E L+D TS PS + + DD+R GALIA LMEE AL A EL Q + +A S AL AVYGP VAAG D VVELSVR R+TTLRSTLQAC SALAARFD Sbjct: 222 SPDAFICMVKYGSADGSSSFQPSKWIPR--RGLPNYLG---TSSHGPCFGSDLCMSLHDDNARFLHVAIGAFNVSEDSAFFTLGGQTVKEIEVFRVCREATAGSPPPPPRAKPATTSENGLIDLTS-GGPSDAATESYDDDVRMSGALIAESLMEERAALREAFAELAQPNTKAGESVNALTAVYGPDVAAGKEDTVVELSVRETRLTTLRSTLQACPDSALAARFD 442
BLAST of mRNA_L-elsbetiae_contig6163.14736.1 vs. uniprot
Match: D7FIX8_ECTSI (BTB_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX8_ECTSI) HSP 1 Score: 134 bits (336), Expect = 6.220e-34 Identity = 70/116 (60.34%), Postives = 82/116 (70.69%), Query Frame = 1 Query: 898 MEEHTALFHAQTELVQASDRASASAKALAAVYGPRVAAGMRDGVVELSVRGIRMTTLRSTLQACSKSALAARFDPEKWPASGKDLDEHGRQVVDCRHSCFSKLLDVLRMRERAAWA 1245 ME L A EL A R +A A ALAAVYGP VA G + VVELSVRG M TLRSTL+ C SALAARFD +KWPA+ KD+D +GR+V+DC+ S FSK+LDVLRM +R WA Sbjct: 1 MEAEMVLQEAGIELSPAKARTTACATALAAVYGPDVANGQEEDVVELSVRGTEMMTLRSTLRICPSSALAARFDEDKWPAAKKDVDSNGRRVIDCKPSVFSKVLDVLRMAKRVRWA 116
BLAST of mRNA_L-elsbetiae_contig6163.14736.1 vs. uniprot
Match: D7G141_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G141_ECTSI) HSP 1 Score: 135 bits (341), Expect = 5.310e-31 Identity = 106/313 (33.87%), Postives = 150/313 (47.92%), Query Frame = 1 Query: 412 LTPEGGEIQTSRALSPGAFVFMLKDGSAAASSDFQPAK-WSTRSRQMATHYIGPKVT-----PHYGPGGLKVIRWQK------CTCIITTGSNPFRVPDDSSFLDLNGKRATEIEVYEV----------VPEGIASPPAKRSRRSSGHEVLLVDQTSIPAPSALSAQEASDDLRNFGALIASPLMEEHTALFHAQTELVQASDRASASAKALAAVYGPRVAAGM--RDGVVELSVRGIRMTTLRSTLQACSKSALAARFDPEKWPAS------------GKDLDEHGRQVVDCRHSCFSKLLDVLRMRERAAW 1242 + P+ ++T S AF+F+L F AK WS + + + P+ P +G + V + C ++TG + V +DS F+ L+GK EIE++ V V +PP L D+++ +A + Q FG+ +A LMEE AL +AQTEL +A RA+A+A+ALA VYGP VA+ + VVELSVRG+ +TTLRSTL+AC SA + P G E R+ VDC SCFSK+LDV+RMR+RAAW Sbjct: 271 IVPQEVGMETGNQRSSSAFLFLLDSPG----GGFPTAKKWSIKEGEDSCAIHWPETADVCAGPAFGLEDMCVTFSESEGQSGSSGCTLSTGGEFYDVDEDSPFVGLDGKEVAEIEIFRVDKTARVEHQDVAPVATTPPQSNIFPDKRKHFLHPDRSADEIEAAYALQ--------FGSSLAELLMEEQMALAYAQTELEEAKKRAAATARALAIVYGPGVASARVEENAVVELSVRGMSVTTLRSTLEACPDSAFSTWLGAADRPVGCGDDGEANDEGLGGRTSEDCRRKVDCDPSCFSKILDVMRMRKRAAW 571 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6163.14736.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6163.14736.1 >prot_L-elsbetiae_contig6163.14736.1 ID=prot_L-elsbetiae_contig6163.14736.1|Name=mRNA_L-elsbetiae_contig6163.14736.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=417bp GGSGERQPSHGRRVPRGREAVPAARRALAGAGGGVRFRPRLRPRPCPRHGback to top mRNA from alignment at L-elsbetiae_contig6163:2321..3572+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6163.14736.1 ID=mRNA_L-elsbetiae_contig6163.14736.1|Name=mRNA_L-elsbetiae_contig6163.14736.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1252bp|location=Sequence derived from alignment at L-elsbetiae_contig6163:2321..3572+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6163:2321..3572+ >mRNA_L-elsbetiae_contig6163.14736.1 ID=mRNA_L-elsbetiae_contig6163.14736.1|Name=mRNA_L-elsbetiae_contig6163.14736.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2502bp|location=Sequence derived from alignment at L-elsbetiae_contig6163:2321..3572+ (Laminarionema elsbetiae ELsaHSoW15)back to top |