mRNA_L-elsbetiae_contig6163.14736.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6163.14736.1
Unique NamemRNA_L-elsbetiae_contig6163.14736.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6163.14736.1 vs. uniprot
Match: D7G2H5_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2H5_ECTSI)

HSP 1 Score: 207 bits (528), Expect = 7.670e-58
Identity = 123/268 (45.90%), Postives = 158/268 (58.96%), Query Frame = 1
Query:  454 SPGAFVFMLKDGSAAASSDFQPAKWSTRSRQMATHYI-GPKVTPHYGPGGLKVIRWQKCTCIITTGSNPFRVPDDSSFLDLNGKRATEIEVYEVVPEGIA-SPPAKRSRRSSGHEVLLVDQTSIPAPSALSAQEASDDLRNFGALIASPLMEEHTALFHAQTELVQASDRASASAKALAAVYGPRVAAGMRDGVVELSVRGIRMTTLRSTLQACSKSALAARFDPEKWPASGKDLDEHGRQVVDCRHSCFSKLLDVLRMRERAAWAGS 1251
            S GAF+FMLKD      + FQP KW  R        + G    P++G   L V         +      + VP  S+F +LNG+  TEIEV++V       S P+KR +     +      TS    +  +++EA+ D   FG  IA  LMEE  AL  A+ EL QA  +A+AS  ALAAVYGP VA G  D VVELSVRG RMTTLRSTLQAC +SALAA F+ +KWP + KD+DE GR++++C  + F K+LDVLRMR+RAAWA S
Sbjct:  246 SLGAFIFMLKDSDMGGPNSFQPVKWGKRDNNGGCDVVVGASRGPYFGRTDLVVNFNNYFPVTLQAQPYSYDVPSGSTFPNLNGQTITEIEVFQVYSAAATTSSPSKRLKIQGPEDTHGAVSTSS---TNTASREANSDAETFGNAIAGALMEERIALHQAEAELEQAHSKAAASGDALAAVYGPEVARGAIDTVVELSVRGTRMTTLRSTLQACRESALAALFNEDKWPPTDKDVDEQGRRLINCSPAVFQKVLDVLRMRKRAAWAAS 510          
BLAST of mRNA_L-elsbetiae_contig6163.14736.1 vs. uniprot
Match: D7FIX7_ECTSI (BTB_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX7_ECTSI)

HSP 1 Score: 206 bits (525), Expect = 1.110e-57
Identity = 118/267 (44.19%), Postives = 156/267 (58.43%), Query Frame = 1
Query:  454 SPGAFVFMLKDGSAAASSDFQPAKWSTRSRQMA-THYIGPKVTPHYGPGGLKVIRWQKCTCIITTGSNPFRVPDDSSFLDLNGKRATEIEVYEVVPEGIASPPAKRSRRSSGHEVLLVDQTSIPAPSALSAQEASDDLRNFGALIASPLMEEHTALFHAQTELVQASDRASASAKALAAVYGPRVAAGMRDGVVELSVRGIRMTTLRSTLQACSKSALAARFDPEKWPASGKDLDEHGRQVVDCRHSCFSKLLDVLRMRERAAWAGS 1251
            SPGAF+FMLKDG    S  +Q  KW  +  + A   Y G    P +G G    + W      + TG+  +  P  S F +LNG R  ++E + V P+     P   +  +   +  + D+T   AP      + +DD+R+FG L+A  LMEE   L  A  EL  A  R  A A A+AAVYGP VA G  D VVEL+VRG RMTTLRSTL+ C  SALAA F+ E+WP + KDLD +GR+++DC+ S FSK+LDVLR+ +RAAWA S
Sbjct:  217 SPGAFLFMLKDGEGRHSGVYQSTKWGVKDGRSAYAVYRGQGYGPCFGEGRDLHVVWNGTESAVRTGNQTYHAPTGSPFPELNGCRLVDVETFRVGPK-----PNTPTSSTKQEDHAVEDKTGPGAP-----VKTADDVRSFGDLVADSLMEEEKLLQEAANELSLAKARTMACATAVAAVYGPEVATGTEDDVVELNVRGTRMTTLRSTLRICPDSALAAWFNEEQWPVAEKDLDSNGRRIIDCKPSVFSKVLDVLRIAKRAAWARS 473          
BLAST of mRNA_L-elsbetiae_contig6163.14736.1 vs. uniprot
Match: A0A6H5LAP0_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAP0_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 3.550e-55
Identity = 121/265 (45.66%), Postives = 154/265 (58.11%), Query Frame = 1
Query:  454 SPGAFVFMLKDGSAAASSDFQPAKWSTRSRQMATHYIGPKVTPHYGPGGLKVIRWQKCTCIITTGSNPFRVPDDSSFLDLNGKRATEIEVYEVVPEGIASPPAKRSRRSSGHEVLLVDQTSIPAPSALSAQEASDDLRNFGALIASPLMEEHTALFHAQTELVQASDRASASAKALAAVYGPRVAAGMRDGVVELSVRGIRMTTLRSTLQACSKSALAARFDPEKWPASGKDLDEHGRQVVDCRHSCFSKLLDVLRMRERAAWAG 1248
            SPGAFVF+LKD     SS F P KW  ++  +A   +     P +G   LKV  W      + T ++ + VP  S FL LNG+   +IE + V  +   + P  +    +G      + T+ P          SDD+  FG LIA  LME    L  A  EL  A  R +A A ALAAVYGP VA+G ++ VVELSVRG  MTTLRSTL+ C  SALAARFD  KWPA+ KDLD  GR+++DCR + FSK+LDVLR+ +RAAWAG
Sbjct:  278 SPGAFVFILKD-EGKGSSTFPPMKWGVKNG-LAAKAVNQGCGPCFGECDLKV-NWNGNMSTVGTDNSTYDVPAGSHFLQLNGRHLLDIEAFRVCSKPTHTLPLAKQEHRAG------EGTNTPTAPV----RTSDDVPTFGQLIADSLMEAEMVLQDAGIELALAKARTTACATALAAVYGPDVASGQQEDVVELSVRGTAMTTLRSTLRVCPDSALAARFDEGKWPAAKKDLDSDGRRMIDCRPAVFSKVLDVLRIAKRAAWAG 529          
BLAST of mRNA_L-elsbetiae_contig6163.14736.1 vs. uniprot
Match: D7FIV0_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV0_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 1.860e-50
Identity = 124/271 (45.76%), Postives = 162/271 (59.78%), Query Frame = 1
Query:  466 FVFMLKDGSAAASSDFQPAKWSTRSR--QMATHYIGPKVTPHYGPG---GLKVIRWQKCTCIITTGSNPFRVPDDSSFLDLNGKRATEIEVYEVVPEGIASPPAKRSRRSSGHEVLLVDQTSIPAPSALSAQEASDDLRNFGALIASPLMEEHTALFHAQTELVQASDRASASAKALAAVYGPRVAAGMRDGVVELSVRGIR----MTTLRSTLQACSKSALAARFDPEKWPASGKDLDEHGRQVV-DCRHSCFSKLLDVLRMRERAAWAG 1248
            F+F+LKDG    S +FQPA W  R R  + +  Y   K    +G G    L V+ W   T  +  G+  + VP    F+ L G+   ++EV+ V  + + + P      +      L+D  +    SA+SA+E  +D+  FG  IA  L +E  AL  AQ ELVQA+  A+AS KALAAVYGP  AAG++D +VELSVRG R    MTTL STLQAC +SALAARFD  KWP + KD D HGR+V+ DC  S FSK+LDVLRM++R AWAG
Sbjct:  230 FLFILKDG-IEESHNFQPAIWGLRIRNPKPSGAYDMEKFGLIFGRGRIFDLSVV-WTNQT--LVAGNQVYAVPPGFQFIRLGGRAIADVEVFRV-RQTMGTLPTTPPTVTG-----LIDCAAYFEASAMSAEEHENDVYRFGTSIAGSLKDERAALHTAQRELVQANTMAAASLKALAAVYGPHTAAGVKDPIVELSVRGSRTTERMTTLLSTLQACPESALAARFDEAKWPVTEKDKDAHGRRVMKDCSPSVFSKVLDVLRMKKREAWAG 490          
BLAST of mRNA_L-elsbetiae_contig6163.14736.1 vs. uniprot
Match: A0A6H5L232_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L232_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 6.900e-48
Identity = 111/267 (41.57%), Postives = 142/267 (53.18%), Query Frame = 1
Query:  454 SPGAFVFMLKDGSAAASSDFQPAKWSTRSRQMATHYI-GPKVTPHYGPGGLKVIRWQKCTCIITTGSNPFRVPDDSSFLDLNGKRATEIEVYEVVPEGIASPPAKRSRRSSGHEVLLVDQTSIPAPSALSAQEASDDLRNFGALIASPLMEEHTALFHAQTELVQASDRASASAKALAAVYGPRVAAGMRDGVVELSVRGIRMTTLRSTLQACSKSALAARFDPEKWPASGKDLDEHGRQVVDCRHSCFSKLLDVLRMRERAAWAGS 1251
            S GAF+FMLKD      + FQP KWS R        + G    P +G   L V+ +      +      + VP   +F +LNG+  TEIEV++V                                             N    IA  LMEE  AL+ A+ EL  A  +A+ S +ALAAVYGP VA G  D VVELSVRG RMTTLRSTL+AC +SALAA F+ +KWPA+ KD+DE GR++++C  + F K+LDVLRMR+RAAWA S
Sbjct:  268 SLGAFIFMLKDSDMGGPNSFQPVKWSKRDNNGGYDVVVGASRGPFFGRTDL-VVNFTYVPVTLQAQPYSYDVPSVPAFPNLNGQTITEIEVFQV---------------------------------------------NICNAIAGALMEERIALYQAEAELEHAHSKAAVSGRALAAVYGPEVARGAIDTVVELSVRGTRMTTLRSTLRACRESALAALFNEDKWPATDKDVDEQGRRLINCSPAVFQKVLDVLRMRKRAAWAAS 488          
BLAST of mRNA_L-elsbetiae_contig6163.14736.1 vs. uniprot
Match: A0A6H5JCR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCR8_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 8.200e-48
Identity = 118/271 (43.54%), Postives = 155/271 (57.20%), Query Frame = 1
Query:  454 SPGAFVFMLKDGSAAASSDFQPAKWSTRSRQMATHYIGPKVTPHY-GPGGLKVIRWQKCTC-IITTGSNPFRVPDDSSFLDLNGKRATEIEVYEVVPEGIASPPAKRSRRSSGHEVLLVDQTSIPAPSALSAQEASDDLRNFGALIASPLMEEHTALFHAQTELVQASDRASASAKALAAVYGPRVAAGMRDGVVELSVRGIR----MTTLRSTLQACSKSALAARFDPEKWPASGKDLDEHGRQVV-DCRHSCFSKLLDVLRMRERAAWA 1245
            SPG+F+FMLKDG+   S   QP+KW  +       Y G  V     GP     + W  C   + T     + +P +  FL   G+   +IEV+ V+P  +                 L+D  +    S +SA+E  +D+  FG  IA  L +E  AL  AQ ELV+A+  A+AS +ALAAVYGP +AAG+ D VVELSVRG R    MTTL STLQAC +SALAARFD  KWP + K+ D HGR+V+ DC    F+K+LDVLRM++R AWA
Sbjct:  235 SPGSFLFMLKDGNEG-SDAVQPSKWGPK-----VGYTGQVVDGRTEGP-----VDWVMCLHRMFTVHCGIYDIPTEHPFLYHMGREVVDIEVFRVLPTSLTVTG-------------LIDCAAYFKCSDMSAEEHENDVYRFGMSIAGSLRDERAALHTAQRELVKANTIAAASVEALAAVYGPNIAAGVEDRVVELSVRGPRKTERMTTLLSTLQACPESALAARFDEAKWPVTDKEKDAHGRRVIKDCSPLVFAKVLDVLRMKKREAWA 481          
BLAST of mRNA_L-elsbetiae_contig6163.14736.1 vs. uniprot
Match: D7FIX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX5_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 3.480e-42
Identity = 109/275 (39.64%), Postives = 148/275 (53.82%), Query Frame = 1
Query:  445 RALSPGAFVFMLKDGSAAASSDFQPAKWSTRSRQMATHYI------GPKVTPHYGPGGLKVIRWQKCTCIITTGSNPFRVPDDSSFLDLNGKRATEIEVYEV--VPEGIASPPAKRSRRSSGHEVLLVDQTSIPAPSALSAQEASDDLRNFGALIASPLMEEHTALFHAQTELVQASDRASASAKALAAVYGPRVAAGMRDGVVELSVRGIRMTTLRSTLQACSKSALAARFDPEKWPASGKDLDEHGRQVVDCRHSCFSKLLDVLRMRERAAWA 1245
            R  S  AF+FML         DF+P KW  +S                   P +G   ++V       C ++TG   + V  +S+FL LNG    ++EV+EV  VPE + +P +         E++  DQ  IP   +L+A+   +    FG  IA  LMEE  AL +A+ EL +A+ RA   A+AL  +YGP VA G  D VVEL+VRG  +TTL  TL AC+ S  AA    E+W + GK +DE GR  V+C  SCFSK+LDV+RMR+RA WA
Sbjct:   89 RRWSNSAFIFMLDSPE----EDFEPVKWGVKSGSQGNALSCCRDSSSQSFRPCFGNHDMRVDFHPTTGCTLSTGRGTYDVDGESTFLALNGGLVLDVEVFEVRSVPEQVETPASS--------EIMSWDQH-IPVDQSLAAEYTLE----FGESIADLLMEELMALAYARVELDEAAARARTVARALCVIYGPHVARGEEDPVVELNVRGRSITTLYWTLHACTDSVFAAWL-AERW-SGGKGVDEDGRYKVNCDPSCFSKILDVMRMRKRAGWA 344          
BLAST of mRNA_L-elsbetiae_contig6163.14736.1 vs. uniprot
Match: A0A6H5KTF6_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTF6_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 4.840e-39
Identity = 105/227 (46.26%), Postives = 129/227 (56.83%), Query Frame = 1
Query:  454 SPGAFVFMLKDGSAAASSDFQPAKWSTRSRQMATHYIGPKVTPHYGP---GGLKVIRWQKCTCIITTGSNPFRVPDDSSFLDLNGKRATEIEVYEVVPEGIAS--PPAKRSRRSSGHEVLLVDQTSIPAPSALSAQEASDDLRNFGALIASPLMEEHTALFHAQTELVQASDRASASAKALAAVYGPRVAAGMRDGVVELSVRGIRMTTLRSTLQACSKSALAARFD 1119
            SP AF+ M+K GSA  SS FQP+KW  R  +   +Y+G   T  +GP     L +         +      F V +DS+F  L G+   EIEV+ V  E  A   PP  R++ ++  E  L+D TS   PS  + +   DD+R  GALIA  LMEE  AL  A  EL Q + +A  S  AL AVYGP VAAG  D VVELSVR  R+TTLRSTLQAC  SALAARFD
Sbjct:  222 SPDAFICMVKYGSADGSSSFQPSKWIPR--RGLPNYLG---TSSHGPCFGSDLCMSLHDDNARFLHVAIGAFNVSEDSAFFTLGGQTVKEIEVFRVCREATAGSPPPPPRAKPATTSENGLIDLTS-GGPSDAATESYDDDVRMSGALIAESLMEERAALREAFAELAQPNTKAGESVNALTAVYGPDVAAGKEDTVVELSVRETRLTTLRSTLQACPDSALAARFD 442          
BLAST of mRNA_L-elsbetiae_contig6163.14736.1 vs. uniprot
Match: D7FIX8_ECTSI (BTB_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX8_ECTSI)

HSP 1 Score: 134 bits (336), Expect = 6.220e-34
Identity = 70/116 (60.34%), Postives = 82/116 (70.69%), Query Frame = 1
Query:  898 MEEHTALFHAQTELVQASDRASASAKALAAVYGPRVAAGMRDGVVELSVRGIRMTTLRSTLQACSKSALAARFDPEKWPASGKDLDEHGRQVVDCRHSCFSKLLDVLRMRERAAWA 1245
            ME    L  A  EL  A  R +A A ALAAVYGP VA G  + VVELSVRG  M TLRSTL+ C  SALAARFD +KWPA+ KD+D +GR+V+DC+ S FSK+LDVLRM +R  WA
Sbjct:    1 MEAEMVLQEAGIELSPAKARTTACATALAAVYGPDVANGQEEDVVELSVRGTEMMTLRSTLRICPSSALAARFDEDKWPAAKKDVDSNGRRVIDCKPSVFSKVLDVLRMAKRVRWA 116          
BLAST of mRNA_L-elsbetiae_contig6163.14736.1 vs. uniprot
Match: D7G141_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G141_ECTSI)

HSP 1 Score: 135 bits (341), Expect = 5.310e-31
Identity = 106/313 (33.87%), Postives = 150/313 (47.92%), Query Frame = 1
Query:  412 LTPEGGEIQTSRALSPGAFVFMLKDGSAAASSDFQPAK-WSTRSRQMATHYIGPKVT-----PHYGPGGLKVIRWQK------CTCIITTGSNPFRVPDDSSFLDLNGKRATEIEVYEV----------VPEGIASPPAKRSRRSSGHEVLLVDQTSIPAPSALSAQEASDDLRNFGALIASPLMEEHTALFHAQTELVQASDRASASAKALAAVYGPRVAAGM--RDGVVELSVRGIRMTTLRSTLQACSKSALAARFDPEKWPAS------------GKDLDEHGRQVVDCRHSCFSKLLDVLRMRERAAW 1242
            + P+   ++T    S  AF+F+L          F  AK WS +  + +     P+       P +G   + V   +         C ++TG   + V +DS F+ L+GK   EIE++ V          V     +PP            L  D+++    +A + Q        FG+ +A  LMEE  AL +AQTEL +A  RA+A+A+ALA VYGP VA+     + VVELSVRG+ +TTLRSTL+AC  SA +        P              G    E  R+ VDC  SCFSK+LDV+RMR+RAAW
Sbjct:  271 IVPQEVGMETGNQRSSSAFLFLLDSPG----GGFPTAKKWSIKEGEDSCAIHWPETADVCAGPAFGLEDMCVTFSESEGQSGSSGCTLSTGGEFYDVDEDSPFVGLDGKEVAEIEIFRVDKTARVEHQDVAPVATTPPQSNIFPDKRKHFLHPDRSADEIEAAYALQ--------FGSSLAELLMEEQMALAYAQTELEEAKKRAAATARALAIVYGPGVASARVEENAVVELSVRGMSVTTLRSTLEACPDSAFSTWLGAADRPVGCGDDGEANDEGLGGRTSEDCRRKVDCDPSCFSKILDVMRMRKRAAW 571          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6163.14736.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7G2H5_ECTSI7.670e-5845.90TLDc domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FIX7_ECTSI1.110e-5744.19BTB_2 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5LAP0_9PHAE3.550e-5545.66TLDc domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FIV0_ECTSI1.860e-5045.76TLDc domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L232_9PHAE6.900e-4841.57TLDc domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JCR8_9PHAE8.200e-4843.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIX5_ECTSI3.480e-4239.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KTF6_9PHAE4.840e-3946.26TLDc domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FIX8_ECTSI6.220e-3460.34BTB_2 domain-containing protein n=1 Tax=Ectocarpus... [more]
D7G141_ECTSI5.310e-3133.87Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6163contigL-elsbetiae_contig6163:2321..3572 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score64.3
Seed ortholog evalue1.5e-07
Seed eggNOG ortholog2880.D8LMI2
Preferred nameKCTD18
KEGG koko:K21917,ko:K21921
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein homooligomerization
EggNOG OGsKOG2723@1,KOG2723@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04121
Exons1
Model size1254
Cds size1251
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816674.8449779-CDS-L-elsbetiae_contig6163:2320..35711622816674.8449779-CDS-L-elsbetiae_contig6163:2320..3571Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6163 2321..3571 +
1691683730.9093673-CDS-L-elsbetiae_contig6163:2320..35711691683730.9093673-CDS-L-elsbetiae_contig6163:2320..3571Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6163 2321..3571 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6163.14736.1prot_L-elsbetiae_contig6163.14736.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6163 2321..3571 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6163.14736.1

>prot_L-elsbetiae_contig6163.14736.1 ID=prot_L-elsbetiae_contig6163.14736.1|Name=mRNA_L-elsbetiae_contig6163.14736.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=417bp
GGSGERQPSHGRRVPRGREAVPAARRALAGAGGGVRFRPRLRPRPCPRHG
HAGDGGKHSSGARGDRSPDSRNPEMVSRQPAGAEAAVPRVARWLEQRSVS
KQVRVSRPNNLHVPGDDSSHRQKPQRHRRLLHARLCALTPEGGEIQTSRA
LSPGAFVFMLKDGSAAASSDFQPAKWSTRSRQMATHYIGPKVTPHYGPGG
LKVIRWQKCTCIITTGSNPFRVPDDSSFLDLNGKRATEIEVYEVVPEGIA
SPPAKRSRRSSGHEVLLVDQTSIPAPSALSAQEASDDLRNFGALIASPLM
EEHTALFHAQTELVQASDRASASAKALAAVYGPRVAAGMRDGVVELSVRG
IRMTTLRSTLQACSKSALAARFDPEKWPASGKDLDEHGRQVVDCRHSCFS
KLLDVLRMRERAAWAGS
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mRNA from alignment at L-elsbetiae_contig6163:2321..3572+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6163.14736.1 ID=mRNA_L-elsbetiae_contig6163.14736.1|Name=mRNA_L-elsbetiae_contig6163.14736.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1252bp|location=Sequence derived from alignment at L-elsbetiae_contig6163:2321..3572+ (Laminarionema elsbetiae ELsaHSoW15)
GGCGGTAGCGGCGAACGCCAGCCAAGCCATGGACGACGCGTTCCCCGCGG ACGAGAGGCCGTACCTGCCGCACGTCGCGCGCTTGCTGGGGCTGGCGGCG GTGTCCGCTTCCGCCCCCGCCTCCGCCCCCGACCCTGCCCTCGCCACGGG CATGCGGGTGATGGGGGGAAGCACAGTTCTGGGGCCCGAGGAGACCGCTC CCCTGACAGCAGAAATCCAGAAATGGTGTCCAGGCAACCCGCAGGAGCTG AAGCTGCTGTACCGCGCGTCGCGCGATGGCTGGAGCAACGAAGCGTTTCG AAGCAAGTGCGGGTCAGTCGTCCCAACAATCTCCATGTTCCGGGTGATGA CTCAAGCCACAGGCAGAAGCCACAGCGTCATCGGCGGCTTCTCCATGCTC GGCTTTGCGCCTTGACCCCGGAAGGCGGCGAAATCCAAACGTCACGTGCC CTATCGCCCGGAGCCTTCGTGTTCATGCTCAAGGATGGCAGCGCTGCAGC GTCAAGCGACTTCCAGCCTGCGAAGTGGAGCACCCGCTCCCGTCAAATGG CCACACACTACATCGGACCAAAGGTCACTCCACACTACGGCCCGGGCGGG CTGAAGGTGATACGCTGGCAGAAGTGCACGTGCATCATCACGACAGGGAG TAACCCCTTCCGCGTTCCGGACGACTCTTCCTTCCTCGATCTCAACGGCA AGCGCGCTACAGAAATCGAGGTTTATGAAGTGGTCCCGGAGGGCATCGCT TCGCCGCCGGCTAAGCGCTCGAGGCGCTCCAGTGGCCACGAGGTCCTGCT CGTAGACCAAACCAGCATCCCTGCCCCGTCGGCTCTGTCGGCGCAAGAAG CGAGCGACGACCTTCGCAACTTCGGCGCCCTGATCGCCAGCCCGCTCATG GAGGAACATACGGCCCTCTTCCACGCGCAGACCGAGCTGGTGCAAGCCAG CGACAGGGCGTCAGCCTCCGCGAAGGCGCTGGCGGCCGTGTACGGCCCAA GGGTCGCTGCCGGCATGCGAGACGGGGTGGTGGAGCTCAGCGTCCGCGGG ATCAGAATGACCACCCTGCGCTCAACGCTGCAGGCGTGCTCCAAGTCCGC TCTTGCGGCTCGCTTCGACCCGGAGAAGTGGCCGGCGTCCGGAAAAGACC TTGACGAGCACGGGCGACAGGTGGTGGACTGCCGTCACTCCTGCTTCTCC AAGCTCCTGGACGTCCTGCGAATGAGAGAGCGCGCCGCGTGGGCCGGCAG CG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6163:2321..3572+

>mRNA_L-elsbetiae_contig6163.14736.1 ID=mRNA_L-elsbetiae_contig6163.14736.1|Name=mRNA_L-elsbetiae_contig6163.14736.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2502bp|location=Sequence derived from alignment at L-elsbetiae_contig6163:2321..3572+ (Laminarionema elsbetiae ELsaHSoW15)
GGCGGTAGCGGCGAACGCCAGCCAAGCCATGGACGACGCGTTCCCCGCGG
ACGAGAGGCCGTACCTGCCGCACGTCGCGCGCTTGCTGGGGCTGGCGGCG
GTGTCCGCTTCCGCCCCCGCCTCCGCCCCCGACCCTGCCCTCGCCACGGG
CATGCGGGTGATGGGGGGAAGCACAGTTCTGGGGCCCGAGGAGACCGCTC
CCCTGACAGCAGAAATCCAGAAATGGTGTCCAGGCAACCCGCAGGAGCTG
AAGCTGCTGTACCGCGCGTCGCGCGATGGCTGGAGCAACGAAGCGTTTCG
AAGCAAGTGCGGGTCAGTCGTCCCAACAATCTCCATGTTCCGGGTGATGA
CTCAAGCCACAGGCAGAAGCCACAGCGTCATCGGCGGCTTCTCCATGCTC
GGCTTTGCGCCTTGACCCCGGAAGGCGGCGAAATCCAAACGTCACGTGCC
CTATCGCCCGGAGCCTTCGTGTTCATGCTCAAGGATGGCAGCGCTGCAGC
GTCAAGCGACTTCCAGCCTGCGAAGTGGAGCACCCGCTCCCGTCAAATGG
CCACACACTACATCGGACCAAAGGTCACTCCACACTACGGCCCGGGCGGG
CTGAAGGTGATACGCTGGCAGAAGTGCACGTGCATCATCACGACAGGGAG
TAACCCCTTCCGCGTTCCGGACGACTCTTCCTTCCTCGATCTCAACGGCA
AGCGCGCTACAGAAATCGAGGTTTATGAAGTGGTCCCGGAGGGCATCGCT
TCGCCGCCGGCTAAGCGCTCGAGGCGCTCCAGTGGCCACGAGGTCCTGCT
CGTAGACCAAACCAGCATCCCTGCCCCGTCGGCTCTGTCGGCGCAAGAAG
CGAGCGACGACCTTCGCAACTTCGGCGCCCTGATCGCCAGCCCGCTCATG
GAGGAACATACGGCCCTCTTCCACGCGCAGACCGAGCTGGTGCAAGCCAG
CGACAGGGCGTCAGCCTCCGCGAAGGCGCTGGCGGCCGTGTACGGCCCAA
GGGTCGCTGCCGGCATGCGAGACGGGGTGGTGGAGCTCAGCGTCCGCGGG
ATCAGAATGACCACCCTGCGCTCAACGCTGCAGGCGTGCTCCAAGTCCGC
TCTTGCGGCTCGCTTCGACCCGGAGAAGTGGCCGGCGTCCGGAAAAGACC
TTGACGAGCACGGGCGACAGGTGGTGGACTGCCGTCACTCCTGCTTCTCC
AAGCTCCTGGACGTCCTGCGAATGAGAGAGCGCGCCGCGTGGGCCGGCAG
CGGCGGTAGCGGCGAACGCCAGCCAAGCCATGGACGACGCGTTCCCCGCG
GACGAGAGGCCGTACCTGCCGCACGTCGCGCGCTTGCTGGGGCTGGCGGC
GGTGTCCGCTTCCGCCCCCGCCTCCGCCCCCGACCCTGCCCTCGCCACGG
GCATGCGGGTGATGGGGGGAAGCACAGTTCTGGGGCCCGAGGAGACCGCT
CCCCTGACAGCAGAAATCCAGAAATGGTGTCCAGGCAACCCGCAGGAGCT
GAAGCTGCTGTACCGCGCGTCGCGCGATGGCTGGAGCAACGAAGCGTTTC
GAAGCAAGTGCGGGTCAGTCGTCCCAACAATCTCCATGTTCCGGGTGATG
ACTCAAGCCACAGGCAGAAGCCACAGCGTCATCGGCGGCTTCTCCATGCT
CGGCTTTGCGCCTTGACCCCGGAAGGCGGCGAAATCCAAACGTCACGTGC
CCTATCGCCCGGAGCCTTCGTGTTCATGCTCAAGGATGGCAGCGCTGCAG
CGTCAAGCGACTTCCAGCCTGCGAAGTGGAGCACCCGCTCCCGTCAAATG
GCCACACACTACATCGGACCAAAGGTCACTCCACACTACGGCCCGGGCGG
GCTGAAGGTGATACGCTGGCAGAAGTGCACGTGCATCATCACGACAGGGA
GTAACCCCTTCCGCGTTCCGGACGACTCTTCCTTCCTCGATCTCAACGGC
AAGCGCGCTACAGAAATCGAGGTTTATGAAGTGGTCCCGGAGGGCATCGC
TTCGCCGCCGGCTAAGCGCTCGAGGCGCTCCAGTGGCCACGAGGTCCTGC
TCGTAGACCAAACCAGCATCCCTGCCCCGTCGGCTCTGTCGGCGCAAGAA
GCGAGCGACGACCTTCGCAACTTCGGCGCCCTGATCGCCAGCCCGCTCAT
GGAGGAACATACGGCCCTCTTCCACGCGCAGACCGAGCTGGTGCAAGCCA
GCGACAGGGCGTCAGCCTCCGCGAAGGCGCTGGCGGCCGTGTACGGCCCA
AGGGTCGCTGCCGGCATGCGAGACGGGGTGGTGGAGCTCAGCGTCCGCGG
GATCAGAATGACCACCCTGCGCTCAACGCTGCAGGCGTGCTCCAAGTCCG
CTCTTGCGGCTCGCTTCGACCCGGAGAAGTGGCCGGCGTCCGGAAAAGAC
CTTGACGAGCACGGGCGACAGGTGGTGGACTGCCGTCACTCCTGCTTCTC
CAAGCTCCTGGACGTCCTGCGAATGAGAGAGCGCGCCGCGTGGGCCGGCA
GC
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