mRNA_L-elsbetiae_contig6163.14735.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6163.14735.1 vs. uniprot
Match: D7FIY4_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIY4_ECTSI) HSP 1 Score: 113 bits (283), Expect = 2.290e-27 Identity = 60/134 (44.78%), Postives = 80/134 (59.70%), Query Frame = 3 Query: 27 SMPRSEHNGPGRFRATMNAGKREAETRLSLRRAELDKAWADLDSRWPGVDQHMSAMGIVKKAPADDHTVELNIRGSLVNFRRPLVEVQGEGGGGGGLCTLASLFDNVWDDRLPRDADGRIVLDESPTCVKHLLH 428 +M R + N F + A RE LS RR +D+AWAD+D W + +HM+ +GI K + V+LN+ GSL+ FRR + E +G+G L SL + WD R+PRD+DGRIVLDESPTCVK L H Sbjct: 64 NMLRFQSNEQKTFSEILEASARETNDILSQRRKVMDQAWADIDEGWQALQEHMAKIGITKPLDLKEGLVKLNVGGSLLAFRRSVFEGKGKGA----TSALGSLCEAEWDKRIPRDSDGRIVLDESPTCVKRLFH 193
BLAST of mRNA_L-elsbetiae_contig6163.14735.1 vs. uniprot
Match: D7G2H5_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2H5_ECTSI) HSP 1 Score: 102 bits (255), Expect = 9.340e-23 Identity = 51/108 (47.22%), Postives = 70/108 (64.81%), Query Frame = 3 Query: 108 LSLRRAELDKAWADLDSRWPGVDQHMSAMGIVKKAPADDHTVELNIRGSLVNFRRPLVEVQGEGGGGGGLCTLASLFDNVWDDRLPRDADGRIVLDESPTCVKHLLHT 431 LS RR E+ +AW D+D W ++Q GI K + + + LN+ GS +NFRR ++ + E L +LF++VWDDRLPRD+DGRIVLDESP CVKHL+H+ Sbjct: 5 LSQRRKEMSQAWEDVDRGWHELNQCRIDAGITKPSGSQQGMLRLNVGGSHLNFRRCILAGRKEPSA---TWALGNLFESVWDDRLPRDSDGRIVLDESPACVKHLIHS 109
BLAST of mRNA_L-elsbetiae_contig6163.14735.1 vs. uniprot
Match: A0A6H5LAP0_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAP0_9PHAE) HSP 1 Score: 100 bits (248), Expect = 8.790e-22 Identity = 54/133 (40.60%), Postives = 77/133 (57.89%), Query Frame = 3 Query: 30 MPRSEHNGPGRFRATMNAGKREAETRLSLRRAELDKAWADLDSRWPGVDQHMSAMGIVKKAPADDHTVELNIRGSLVNFRRPLVEVQGEGGGGGGLCTLASLFDNVWDDRLPRDADGRIVLDESPTCVKHLLH 428 M R + N F AT+ R E LS RR E+D W +D W + + M+ +GI K + + V+LN+ G L+ FRR +++ +G+ L +LF+ WD R+PRD+DG IVLDESPTCVK L+H Sbjct: 1 MLRCQSNEKKTFSATLAVSSRAMEAALSQRRLEMDHEWDSIDEGWQTLRERMTEVGITKPLESKEGIVKLNVGGLLLAFRRSVLDSEGKQQPP--TWALGNLFEAEWDKRVPRDSDGHIVLDESPTCVKQLVH 131
BLAST of mRNA_L-elsbetiae_contig6163.14735.1 vs. uniprot
Match: A0A6H5L232_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L232_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 2.840e-21 Identity = 54/134 (40.30%), Postives = 78/134 (58.21%), Query Frame = 3 Query: 30 MPRSEHNGPGRFRATMNAGKREAETRLSLRRAELDKAWADLDSRWPGVDQHMSAMGIVKKAPADDHTVELNIRGSLVNFRRPLVEVQGEGGGGGGLCTLASLFDNVWDDRLPRDADGRIVLDESPTCVKHLLHT 431 M R N F AT+ A +E E L RR + +AW D++ W ++Q GI K + + + LN+ GS + FRR +++ + E L +LF++VWDDRLPRD+DGRIVLD+SP CVK L+H+ Sbjct: 1 MSRCHMNEDDTFSATVTAYSKEMEAALGQRRKGMSQAWEDVERGWHELNQCRIDAGITKPFGSQEGMLRLNVGGSHLRFRRCVLDGKKEPSA---TWALGNLFESVWDDRLPRDSDGRIVLDKSPACVKDLIHS 131
BLAST of mRNA_L-elsbetiae_contig6163.14735.1 vs. uniprot
Match: D7G141_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G141_ECTSI) HSP 1 Score: 92.0 bits (227), Expect = 6.410e-19 Identity = 49/123 (39.84%), Postives = 73/123 (59.35%), Query Frame = 3 Query: 63 FRATMNAGKREAETRLSLRRAELDKAWADLDSRWPGVDQHMSAMGIVKKAPADDHTVELNIRGSLVNFRRPLVEVQGEGGGGGGLCTLASLFDNVWDDRLPRDADGRIVLDESPTCVKHLLHT 431 FR T +A ++ L L + +D+ W DL++ W Q++ +G V+ ++ + LNI G N R L+ + EG G L +LF+ +WD+R+PRD DGRIVLDESP CVKH++HT Sbjct: 12 FRETASAQIKQLNAALDLAISAMDEPWRDLENGWERHQQYLVDVG-VRPTTGNEGVLRLNIGGVPANVHRSLI-AEAEGFKG---SVLGALFEQMWDERVPRDMDGRIVLDESPACVKHIIHT 129
BLAST of mRNA_L-elsbetiae_contig6163.14735.1 vs. uniprot
Match: D7FIX9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX9_ECTSI) HSP 1 Score: 77.8 bits (190), Expect = 5.270e-15 Identity = 48/124 (38.71%), Postives = 65/124 (52.42%), Query Frame = 3 Query: 63 FRATMNAGKREAETRLSLRRAELDKAWADLDSRWPGVDQHMSAMGIVKKAPADDHTVELNIRGSLVNFRRPLVEVQGEGGGGGGLCT--LASLFDNVWDDRLPRDADGRIVLDESPTCVKHLLH 428 F ATM A E E L+ R + + M+ +GI + +LN+ GSLV+FRR ++ + G T L +LF+ WD R+P D+DGRIVLDESPTCVKHL+H Sbjct: 12 FSATMEAFALETEAALAQRWQXXXXXXXXXXXXXXXLRERMTQVGITTPLDSKKGIDKLNVGGSLVSFRRSVLSTEAGGKQQQQPSTWALENLFEAEWDKRVPGDSDGRIVLDESPTCVKHLVH 135
BLAST of mRNA_L-elsbetiae_contig6163.14735.1 vs. uniprot
Match: D7FSV1_ECTSI (Potassium channel tetramerisation domain containing 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSV1_ECTSI) HSP 1 Score: 75.9 bits (185), Expect = 1.590e-13 Identity = 46/125 (36.80%), Postives = 62/125 (49.60%), Query Frame = 3 Query: 63 FRATMNAGKREAETRLSLRRAELDKAWADLDSRWPGVDQHMSAMGIVKKAPA---DDHTVELNI-RGSLVNFRRPLVEVQGEGGGGGGLCTLASLFDNVWDDRLPRDADGRIVLDESPTCVKHLL 425 F A + E L L A+ AW DL+ W ++H +GIVK A + ++ EL G LV+ RR + E Q LF WD+R+PRDA G +VLDESP CV+HL+ Sbjct: 13 FSTVRGAHAEQQEAALRLVEADFRTAWEDLEEGWDHFEKHQIEIGIVKSATSCGEENEYGELECCGGELVHVRRGMFEGQ----------PFGDLFKGAWDERVPRDAAGYVVLDESPACVQHLV 127
BLAST of mRNA_L-elsbetiae_contig6163.14735.1 vs. uniprot
Match: D7FIV0_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV0_ECTSI) HSP 1 Score: 75.1 bits (183), Expect = 5.070e-13 Identity = 42/100 (42.00%), Postives = 53/100 (53.00%), Query Frame = 3 Query: 129 LDKAWADLDSRWPGVDQHMSAMGIVKKAPADDHTVELNIRGSLVNFRRPLVEVQGEGGGGGGLCTLASLFDN-VWDDRLPRDADGRIVLDESPTCVKHLL 425 + K W LDS W ++ M+ G+ + V LN+ G VN R ++ GE TL LF+ VWD RLPR DGRIVLDESP CV+ LL Sbjct: 1 MKKEWDKLDSGWEALESKMNETGMSMVSSIQPSIVRLNVGGLDVNIARSVLRKAGESSSS--TWTLGDLFEGCVWDKRLPRCEDGRIVLDESPVCVEELL 98
BLAST of mRNA_L-elsbetiae_contig6163.14735.1 vs. uniprot
Match: D7FIU9_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU9_ECTSI) HSP 1 Score: 68.6 bits (166), Expect = 3.180e-11 Identity = 40/100 (40.00%), Postives = 50/100 (50.00%), Query Frame = 3 Query: 129 LDKAWADLDSRWPGVDQHMSAMGIVKKAPADDHTVELNIRGSLVNFRRPLVEVQGEGGGGGGLCTLASLFDN-VWDDRLPRDADGRIVLDESPTCVKHLL 425 + K W LDS W ++ +S G+ + V LN+ G VN R + GE TL LF+ VWD RLPR DGRIVLD S CV+ LL Sbjct: 1 MKKEWDTLDSGWEALESKISQAGMSMVSSIPPSFVRLNVGGLDVNIARSVFRKTGEASSSS--WTLGDLFEGCVWDKRLPRSEDGRIVLDASAVCVEELL 98
BLAST of mRNA_L-elsbetiae_contig6163.14735.1 vs. uniprot
Match: A0A6H5JHS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHS2_9PHAE) HSP 1 Score: 69.3 bits (168), Expect = 5.110e-11 Identity = 44/111 (39.64%), Postives = 58/111 (52.25%), Query Frame = 3 Query: 114 LRRAELDKAWADLDSRWPGVDQHMSAMGIVKKAPADDHTVELNIRGSLVNFRRP-------LVEVQGEGGGGGGLCTLASLFDNVWDDRLPRDADGRIVLDESPTCVKHLL 425 L R E + W W ++Q + G V+ DD T+ LN+ GS V+ R L EV LA+LFD+ WD+RLPRDA+G +VLDESP C KHL+ Sbjct: 22 LERRESHEEWEGFVKGWHKLEQLETEWGRVRSTFVDD-TLTLNVGGSNVDVSRADLHRLPALSEV----------WKLANLFDSDWDERLPRDANGLMVLDESPVCFKHLV 121 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6163.14735.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6163.14735.1 >prot_L-elsbetiae_contig6163.14735.1 ID=prot_L-elsbetiae_contig6163.14735.1|Name=mRNA_L-elsbetiae_contig6163.14735.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=134bp MPRSEHNGPGRFRATMNAGKREAETRLSLRRAELDKAWADLDSRWPGVDQback to top mRNA from alignment at L-elsbetiae_contig6163:1861..2291+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6163.14735.1 ID=mRNA_L-elsbetiae_contig6163.14735.1|Name=mRNA_L-elsbetiae_contig6163.14735.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=431bp|location=Sequence derived from alignment at L-elsbetiae_contig6163:1861..2291+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6163:1861..2291+ >mRNA_L-elsbetiae_contig6163.14735.1 ID=mRNA_L-elsbetiae_contig6163.14735.1|Name=mRNA_L-elsbetiae_contig6163.14735.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=804bp|location=Sequence derived from alignment at L-elsbetiae_contig6163:1861..2291+ (Laminarionema elsbetiae ELsaHSoW15)back to top |