mRNA_L-elsbetiae_contig616.14732.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig616.14732.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE) HSP 1 Score: 110 bits (274), Expect = 4.800e-23 Identity = 67/131 (51.15%), Postives = 82/131 (62.60%), Query Frame = 1 Query: 1 DVAGEAATHVVGVSLEGVETQLAEDDVERVLELLANAPVDRAWRRRGYLVLCRAHPDRMRQMQDISSEH-AGMTEATRSSAKVGRTEASGSSGAVEGSPVGERGGGDWAVVVAMVLELQEEGIFRTIVGYL 390 +V G A ++G +E E +DVERV ELLANAP DRAWRRRGYL++CRA PDR+ + + S H + TRS AK+ R G S V E GG+WAVVV+ V+ LQEEGIFRTIV YL Sbjct: 277 NVQGNKAVDMIGEDVE--EEDRLTEDVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGTHYTNVARRTRSRAKMARAR-----GIAGESTVDESTGGNWAVVVSKVISLQEEGIFRTIVEYL 400
BLAST of mRNA_L-elsbetiae_contig616.14732.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI) HSP 1 Score: 84.3 bits (207), Expect = 4.100e-14 Identity = 53/106 (50.00%), Postives = 69/106 (65.09%), Query Frame = 1 Query: 76 DVERVLELLANAPVDRAWRRRGYLVLCRAHPDRMR-QMQDISSEHAGMTEATRSSAKVGRTEASGSSGAVEGSPVGERGGGDWAVVVAMVLELQEEGIFRTIVGYL 390 +V V ELLANAP DRAWRRRG LVLCRA R R + +D G++ TRS AK+ R++A G+ G G+P G G +W V+EL+EEGIFR++VG+L Sbjct: 319 EVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGLSRRTRSRAKLARSDAVGA-GCRRGTPEGGTGD-EWRSASKRVVELEEEGIFRSVVGFL 422
BLAST of mRNA_L-elsbetiae_contig616.14732.1 vs. uniprot
Match: A0A6H5KNN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNN1_9PHAE) HSP 1 Score: 79.3 bits (194), Expect = 4.880e-14 Identity = 54/109 (49.54%), Postives = 69/109 (63.30%), Query Frame = 1 Query: 67 AEDDVERVLELLANAPVDRAWRRRGYLVLCRAHPDRMR-QMQDISSEHAGMTEATRSSAKVGRTEASGSSGAVEGSPVGERGGGDWAVVVAMVLELQEEGIFRTIVGYL 390 A +V V ELLANAP DRAWRRRG LVLCRA R R + +D G++ TRS AK+ R++A G+ G G+P G G +W V+EL EEGIFR++VG+L Sbjct: 47 AGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGLSRRTRSRAKLARSDAVGA-GCRSGTPEGGTGD-EWRSASRRVVEL-EEGIFRSVVGFL 152
BLAST of mRNA_L-elsbetiae_contig616.14732.1 vs. uniprot
Match: D7G981_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G981_ECTSI) HSP 1 Score: 80.1 bits (196), Expect = 9.210e-13 Identity = 58/132 (43.94%), Postives = 78/132 (59.09%), Query Frame = 1 Query: 1 DVAGEAATHVVGVSLEGVETQLAEDDVERVLELLANAPVDRAWRRRGYLVLCRAHPDRMRQMQDISS-EHAGMTEATRSSAK-VGRTEASGSSGAVEGSPVGERGGGDWAVVVAMVLELQEEGIFRTIVGYL 390 D G ++VG ++ +V+RV +LL AP DRAWRRRG LVLCRAHP+R+ Q+ S + + + TRS K V R + +G SG EG+ R +W+ +V VL L +EGIFRTIVGYL Sbjct: 273 DAYGHTPGNIVGCMTPETDSMFV--NVQRVWKLLQYAPQDRAWRRRGMLVLCRAHPERLGLRQNASHVQESTVLRVTRSRTKLVEREQVAGGSG--EGAAADGRTAREWSNMVYRVLGL-DEGIFRTIVGYL 399
BLAST of mRNA_L-elsbetiae_contig616.14732.1 vs. uniprot
Match: A0A6H5JU78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU78_9PHAE) HSP 1 Score: 69.7 bits (169), Expect = 2.070e-9 Identity = 50/119 (42.02%), Postives = 64/119 (53.78%), Query Frame = 1 Query: 79 VERVLELLANAPVDRAWRRRGYLVLCRAHPDRMRQMQDISSEHAGMTEAT----RSSAKVGRTEASGSSGA--VEGSPVGERGG---------GDWAVVVAMVLELQEEGIFRTIVGYL 390 +ER+ LLA AP DRAWRRRG+LVL R HPDR+R +I A TE R A G+ E G++G G+ G R G + V A ++ L EEG+FR IVG+L Sbjct: 249 LERLSRLLARAPQDRAWRRRGFLVLGRVHPDRVRLAVEIPPAAADATEQPQQRPRRRASTGQVEVDGTNGGGGXTGASSGVRAGIEAVHEGTVAGFGGVSAWMMALTEEGVFRRIVGFL 367
BLAST of mRNA_L-elsbetiae_contig616.14732.1 vs. uniprot
Match: A0A6H5JFR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR1_9PHAE) HSP 1 Score: 62.8 bits (151), Expect = 1.950e-7 Identity = 32/60 (53.33%), Postives = 40/60 (66.67%), Query Frame = 1 Query: 76 DVERVLELLANAPVDRAWRRRGYLVLCRAHPDRMRQMQDISSEHAGMTEATRSSAKVGRT 255 D ERV +LL NAP DRAWRRRG+L+LCRA+P+R+ D SS T + AKV R+ Sbjct: 209 DAERVYKLLRNAPADRAWRRRGFLLLCRAYPERVPPRLDSSSTLVDAARTTHNEAKVPRS 268
BLAST of mRNA_L-elsbetiae_contig616.14732.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 63.9 bits (154), Expect = 2.060e-7 Identity = 35/64 (54.69%), Postives = 43/64 (67.19%), Query Frame = 1 Query: 10 GEAATHVVGVSLEGVETQLAEDDVERVLELLANAPVDRAWRRRGYLVLCRAHPDRMRQMQDISS 201 G A VVG +E L + DVERV +LL NAPVDRAWRRRG+LVLCRA + R+++ SS Sbjct: 242 GRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRAFWIKARRLRAASS 305
BLAST of mRNA_L-elsbetiae_contig616.14732.1 vs. uniprot
Match: A0A6H5KB54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB54_9PHAE) HSP 1 Score: 63.9 bits (154), Expect = 2.120e-7 Identity = 48/134 (35.82%), Postives = 67/134 (50.00%), Query Frame = 1 Query: 61 QLAEDD---VERVLELLANAPVDRAWRRRGYLVLCRAHPDRMR-----------------QMQDISSEHAGMTEATRSSAKV----GRTEASGSSGAVEGSPVGERGGGDWAVVVAMVLELQEEGIFRTIVGYL 390 + A++D +ER+ +LL AP DRAWRRRG+L LCRAHPDR+R Q Q+ S A + ++ +V G GSS A G+ GG + ++ L EE +FR IVG+L Sbjct: 325 EAADEDHRRLERLSKLLTRAPQDRAWRRRGFLALCRAHPDRLRLVVEIPKTADEASGKQPQEQERPSRRARKGQQSKVDVEVDDAHGSVSGEGSSRAGIVRVDGKGDGGGFEFAAGWLVALAEEDVFRKIVGFL 458
BLAST of mRNA_L-elsbetiae_contig616.14732.1 vs. uniprot
Match: D7G751_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G751_ECTSI) HSP 1 Score: 64.3 bits (155), Expect = 2.370e-7 Identity = 42/115 (36.52%), Postives = 62/115 (53.91%), Query Frame = 1 Query: 82 ERVLELLANAPVDRAWRRRGYLVLCRAHPDRMRQMQDISSEHAGMTEATRSSAKVGRTEASGSSGAVEGSPVGERGG------------GDWAVVVAMVLELQEEGIFRTIVGYL 390 + V ++ AP D+AWRRRG+LVLCRA P+R+R + ++AG S + R A SG+ PVGE GG G + +VA V+ L E+G+F TI+ ++ Sbjct: 793 QSVKKMFQRAPRDKAWRRRGWLVLCRAFPNRVR----LKEDNAGTCPRAGRSLRARRVGAGSGSGSSSVPPVGEAGGVPVGTLPPEKMAGGLSALVAKVVGLHEDGVFMTIMEFV 903
BLAST of mRNA_L-elsbetiae_contig616.14732.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 62.0 bits (149), Expect = 9.650e-7 Identity = 46/128 (35.94%), Postives = 74/128 (57.81%), Query Frame = 1 Query: 10 GEAATHVVGVSLEG-VETQLAEDDVERVLELLANAPVDRAWRRRGYLVLCRAHPDRMRQMQDISSEHAGMTEATRSSAKVGRTEASGSSGAVEGSPVGERGGGDWAVVVAMVLELQEEGIFRTIVGYL 390 G+ VVGV + ++ + E D +R+ +LA AP DR+WRRRG+LVL R+ P R+ + + SS + ++ +SAKV R GSS E + ++ D +V ++ L+ EG+FR +VG+L Sbjct: 387 GDTPADVVGVLEQNDLDDEEREADNQRIHRMLARAPADRSWRRRGWLVLSRSCPTRVH-IANGSSSSSSISRINGNSAKVARVSGQGSSRDDEETE--DQMMVDLRDLVGRLVGLEAEGLFRLVVGFL 511 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig616.14732.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig616.14732.1 >prot_L-elsbetiae_contig616.14732.1 ID=prot_L-elsbetiae_contig616.14732.1|Name=mRNA_L-elsbetiae_contig616.14732.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=131bp DVAGEAATHVVGVSLEGVETQLAEDDVERVLELLANAPVDRAWRRRGYLVback to top mRNA from alignment at L-elsbetiae_contig616:16272..19614+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig616.14732.1 ID=mRNA_L-elsbetiae_contig616.14732.1|Name=mRNA_L-elsbetiae_contig616.14732.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3343bp|location=Sequence derived from alignment at L-elsbetiae_contig616:16272..19614+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig616:16272..19614+ >mRNA_L-elsbetiae_contig616.14732.1 ID=mRNA_L-elsbetiae_contig616.14732.1|Name=mRNA_L-elsbetiae_contig616.14732.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=786bp|location=Sequence derived from alignment at L-elsbetiae_contig616:16272..19614+ (Laminarionema elsbetiae ELsaHSoW15)back to top |