mRNA_L-elsbetiae_contig616.14730.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig616.14730.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE) HSP 1 Score: 204 bits (518), Expect = 5.970e-56 Identity = 233/407 (57.25%), Postives = 269/407 (66.09%), Query Frame = 2 Query: 275 DLIAQVLTSKQWAELLKAPLERAVAKGNRGLAQKLPGAGAECGDSLHAATRGGHEGIVNDLLENGAPVSAEDVSYYGHTPLHVAAIAGKTEMVQLLLLHGADKDALDNRGWTXXXXXXXXXXXXXXXXXXXXXADISLRCGQDYKESVMHMAAHEGHVGIMRAAVERGADVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGAAETVDSLLRSGADETILNDEGKAAPDVVGLRFEEEEDLLAEDPDREHKLLANAPADRAWRRRGYLVLCRAHPDRVQQIQDISIAH-ASMARRTRSGAKLGRTEASGSSGAVDASPVDERGGGDWAVVMAMLLRLQEEGIFRAIVGYL 1492 D I ++LTS+Q AELL+A LE A AKGN+ LAQ+L AGAE GD+LH A GGH IV+DLLE+ A ++A D+ G TPL XXXXXXXXXXXXXXXXXXXXX +LR Q +K H AA EGHV I+RA +E GADV+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QGAAE V+SLLR+GADETI N +G A D++G EEE D L ED +R +LLANAPADRAWRRRGYL++CRA PDRV + + S H ++ARRTRS AK+ R G S VDE GG+WAVV++ ++ LQEEGIFR IV YL Sbjct: 3 DFIFEILTSQQLAELLRALLEHAAAKGNKDLAQRLVRAGAEIGDALHRAVDGGHREIVSDLLESEASLAATDMD--GRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRSTQ-FKCPATHAAALEGHVEILRAIIEHGADVDAVDAQQRTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSLLTPLMKAGRQAGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEE-DRLTEDVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGTHYTNVARRTRSRAKMARAR-----GIAGESTVDESTGGNWAVVVSKVISLQEEGIFRTIVEYL 400
BLAST of mRNA_L-elsbetiae_contig616.14730.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI) HSP 1 Score: 138 bits (348), Expect = 3.020e-32 Identity = 139/361 (38.50%), Postives = 163/361 (45.15%), Query Frame = 2 Query: 221 MANRDKREALRGEEEETFDLIAQVLTSKQWAELLKAPLERAVAKGNRGLAQKLPGAGAECGDSLHAATRGGHEGIVNDLLENGAPVSAEDVSYYGHTPLHVAAIAGKTEMVQLLLLHGADKDALDNRGWTXXXXXXXXXXXXXXXXXXXXXADISLRCGQDYKESVMHMAAHEGHVGIMRAAVERGADV---NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGAAETVDSLLRSGADETILNDEGKAAPDVVGLRFEEEEDLLAEDPDREHKLLANAPADRAWRRRGYLVLCRAHPDRVQQIQD 1294 MAN R ALRGEEE FDL A+ T KQWA L++ LE A +G+ L +KL AGAE G ++HAA RGGH I LLE+GA SA D G TPL XXXXXXXXXXXXXXXXXXXXXADI+ R G D + S + + A EGHV +R +E GADV N QG E VD LLR GADET + G A D +G++ EE D + E+ + KLLANAPADRAWRRR LVLCRA PD++Q D Sbjct: 1 MANECARGALRGEEERIFDLAAETCTPKQWAGLMQPFLEHAAGRGHEHLTRKLVEAGAEIGTAVHAAVRGGHCDITEFLLESGASASASDEE--GLTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADINRRYG-DREISALDIGAGEGHVDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEE-DRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQLSSD 357
BLAST of mRNA_L-elsbetiae_contig616.14730.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI) HSP 1 Score: 106 bits (264), Expect = 4.530e-21 Identity = 176/433 (40.65%), Postives = 214/433 (49.42%), Query Frame = 2 Query: 206 GSRQAMANRDK--REALRGEEEETFDLIAQVLTSKQWAELLKAPLERAVAKGNRGLAQKLPGAGAECGD-SLHAATRGGHEGIVNDLLENGAPVSAEDVSYYGHTPLHVAAIAGKTEMVQLLLLHGADKDALDNRGWTXXXXXXXXXXXXXXXXXXXXXADISLRCGQDYKESVMHMAAHEGHVGIMRAAVERGADVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGAAETVDSLLRSGADETILNDEGKAAPDVVGLR-FEEEEDLLAEDPDREHKLLANAPADRAWRRRGYLVLCRAHPDRVQQIQDISIAHASMARRTRSGAKLGRTEASGSSGAVDASPVDERGGGDWAVVMAMLLRLQEEGIFRAIVGYL 1492 GS + +A ++K +E L+GEEE DL+ + +E L APLE AVA+G+ GLAQKL AGA+ G +LH A R GH I LLENGA V +D YG TP XXXXXXXXXXXXXXXXXXXXX +++R + + S + AA V I+R ++ G +VN XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +G+ + V LLR GADETI+ +GK A D +G R F E D +R LL APADRAWRRRG LVLC A+PDR+Q GGD A ++ +L L+E G+FR IV YL Sbjct: 3 GSNRNIAEKNKAAKETLKGEEERVLDLMLDTRCPHEMSEWLAAPLESAVARGDEGLAQKLVQAGAKIGGVALHEAVRRGHIAIAELLLENGASVH-DDEDDYG-TPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLNE-FDMSFLDFAASSQDVEILRMLIDHGMEVNLAAAFGTALHWAAKANRANAIDVLVGAGADIQARNMSGSRPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVGQRRGSVQVVGLLLRWGADETIVCKQGKTAADRIGTRRFPSTE---PGDDERARSLLTRAPADRAWRRRGLLVLCHAYPDRLQL------------------------------------------GGDLAGLVDRVLGLEEVGVFRTIVLYL 387
BLAST of mRNA_L-elsbetiae_contig616.14730.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI) HSP 1 Score: 105 bits (262), Expect = 1.250e-20 Identity = 74/152 (48.68%), Postives = 95/152 (62.50%), Query Frame = 2 Query: 1046 QGAAETVDSLLRSGADETILNDEGKAAPDVVGLRFEEEEDLLAEDPDREHKLLANAPADRAWRRRGYLVLCRA--HPDRVQQIQDISIAHASMARRTRSGAKLGRTEASGSSGAVDASPVDERGGGD-WAVVMAMLLRLQEEGIFRAIVGYL 1492 QG+AE VD LLR GADET + G+ D VG E + LL + H+LLANAPADRAWRRRG LVLCRA R++Q +D ++RRTRS AKL R++A G+ G +P E G GD W ++ L+EEGIFR++VG+L Sbjct: 275 QGSAELVDLLLRRGADETTPDRNGQQPADRVGHCMELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQ-EDGGDTRGGLSRRTRSRAKLARSDAVGA-GCRRGTP--EGGTGDEWRSASKRVVELEEEGIFRSVVGFL 422
BLAST of mRNA_L-elsbetiae_contig616.14730.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI) HSP 1 Score: 102 bits (254), Expect = 9.320e-20 Identity = 203/424 (47.88%), Postives = 244/424 (57.55%), Query Frame = 2 Query: 227 NRDKREALRGEEEETFDLIAQVLTSKQWAELLKAPLERAVAKGNRGLAQKLPGAGAECGD-SLHAATRGGHEGIVNDLLENGAPVSAEDVSYYGHTPLHVAAIAGKTEMVQLLLLHGADKDALDNRGWTXXXXXXXXXXXXXXXXXXXXXADISLRCGQDYKESVMHMAAHEGHVGIMRAAVERGADVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ-GAAETVDSLLRSGADETILNDEGKAAPDVVGLRFEEEEDLLAEDPDREHKLLANAPADRAWRRRGYLVLCRAHPDRVQQIQDISIAHASMARRTRSGAKLGRTEASGSSGAVDASPVDERGGGDWAVVMAMLLRLQEEGIFRAIVGYL 1492 N+ +E ++GE + DL+ + +E L APLE AV G+ GLA+KL AGA+ G +LH R GH + LLENGA V +D YG TP XXXXXXXXXXXXXXXXXXXXX +++R +++ S + AA HV I+R ++ G +V+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + G+A+ VD LLR GADETI++ +G+ A D +G R D ED +R LLA APADRAWRRRG LVLCRAHPDR+Q GGD A ++A + L+E G+FR IV YL Sbjct: 15 NKAAKETMKGEGQRVLDLMFDTRWPHEMSEWLAAPLESAVVSGHEGLARKLVQAGAKVGGVALHETVRRGHIAMAELLLENGASVH-DDEDDYG-TPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRL-TEFEVSALDFAALSDHVEIVRMLIDHGMEVHRANSDGRTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVGQRHGSAQVVDLLLRWGADETIVSKQGETAADSIGTRRCHRTD--PEDDERARSLLARAPADRAWRRRGLLVLCRAHPDRLQL------------------------------------------GGDLAGLVAGVGGLEEVGVFRTIVLYL 391
BLAST of mRNA_L-elsbetiae_contig616.14730.1 vs. uniprot
Match: D7G981_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G981_ECTSI) HSP 1 Score: 98.2 bits (243), Expect = 2.630e-18 Identity = 190/406 (46.80%), Postives = 232/406 (57.14%), Query Frame = 2 Query: 281 IAQVLTSKQWAELLKAPLERAVAKGNRGLAQKLPGAGAECGDSLHAATRGGHEGIVNDLLENGAPVSAEDVSYYGHTPLHVAAIAGKTEMVQLLLLHGADKDALDNRGWTXXXXXXXXXXXXXXXXXXXXXADISLRCGQDYKESVMHMAAHEGHVGIMRAAVERGADVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGAAETVDSLLRSGADETILNDEGKAAPDVVGLRFEEEEDLLAEDPDREHKLLANAPADRAWRRRGYLVLCRAHPDRVQQIQDIS-IAHASMARRTRSGAKL-GRTEASGSSGAVDASPVDERGGGDWAVVMAMLLRLQEEGIFRAIVGYL 1492 +A+ T +QWA L A + A KG GL QKL AGAE G ++HAA G + + N LL+NGA ++ ++ G TPL + DA +G XXXXXXXXXXXXXXXXXXXXX D+++R G XXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +GA E VD LLR ADET + G ++VG E + + + R KLL AP DRAWRRRG LVLCRAHP+R+ Q+ S + +++ R TRS KL R + +G SG + + D R +W+ ++ +L L +EGIFR IVGYL Sbjct: 1 MAETCTPEQWAAWLSAAVVNAADKGKAGLVQKLVKAGAEIGVAMHAAALRGDQDVANSLLQNGASIND---TFDGFTPLXXXXXXXXXXXXXXXXXXXXEIDAAGPKGTXXXXXXXXXXXXXXXXXXXXXXXDVAVRQGDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGANIQATRINGETPLHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSAGDEGAVEVVDLLLRWNADETDDDAYGHTPGNIVGCMTPETDSMFV-NVQRVWKLLQYAPQDRAWRRRGMLVLCRAHPERLGLRQNASHVQESTVLRVTRSRTKLVEREQVAGGSG--EGAAADGRTAREWSNMVYRVLGL-DEGIFRTIVGYL 399
BLAST of mRNA_L-elsbetiae_contig616.14730.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 96.3 bits (238), Expect = 5.160e-17 Identity = 75/161 (46.58%), Postives = 90/161 (55.90%), Query Frame = 2 Query: 1049 GAAETVDSLLRSGADETILNDEGKAAPDVVGLRFEEEEDLLAEDPDREHKLLANAPADRAWRRRGYLVLCRAH--PDRVQQIQDISIAHAS-MARRTRSGAKLGRTEASGSSGAVDASPVDERGGGDWAVVMAMLL-------RLQEEG---IFRAIVGYL 1492 G AE VD LLR GADET +++ G A D+V L+ EE D LAED DR KLLA APADRAWRRRG+L+L RAH RVQ S A A+ +A+RTRS + R E DWA V++ML+ L +G IF IVGYL Sbjct: 637 GTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEES-DSLAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRTRSSEEPSRAEI------------------DWAGVVSMLMGDGVDPISLMGDGANLIFEKIVGYL 778
BLAST of mRNA_L-elsbetiae_contig616.14730.1 vs. uniprot
Match: A0A6H5JFR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR1_9PHAE) HSP 1 Score: 88.6 bits (218), Expect = 7.210e-16 Identity = 134/320 (41.88%), Postives = 166/320 (51.88%), Query Frame = 2 Query: 401 GDSLHAATRGGHEGIVNDLLENGAPVSAEDVSYYGHTPLHVAAIAGKTEMVQLLLL-HGADKDALDNRGWTXXXXXXXXXXXXXXXXXXXXXADISLRCGQDYKESVMHMAAHEGHVGIMRAAVERGADVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGAAETVDSLLRSGADETILNDEGKAAPDVVGLRFEEEEDLLAEDPDREHKLLANAPADRAWRRRGYLVLCRAHPDRVQQIQDISIAHASMARRTRSGAKLGRT 1357 G +LHAA R G+ +V +LLE+GA VS +D G TPL VAA T + LL H AL G A+I++RCG K +V+ +AA +G V I+RA V+ GADV XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + + VD LLR GA ETI++ K A ++ + L D +R +KLL NAPADRAWRRRG+L+LCRA+P+RV D S AR T + AK+ R+ Sbjct: 2 GSALHAAVRYGYAEVVTNLLEHGACVSIKDAR--GSTPLQVAAEC--TPLFGALLFGHLTSARALMAAG-----------------------AEINVRCGLS-KRTVLSLAAEKGDVDILRALVKNGADVTAVDNDRDMALHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQAVVALSKRA-----------------------RRTSAVVDLLLRLGAHETIVDKRKKNAAGLLKKSWWS--CLYPGDAERVYKLLRNAPADRAWRRRGFLLLCRAYPERVPPRLDSSSTLVDAARTTHNEAKVPRS 268
BLAST of mRNA_L-elsbetiae_contig616.14730.1 vs. uniprot
Match: A0A6H5JMJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMJ6_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 4.310e-15 Identity = 48/83 (57.83%), Postives = 54/83 (65.06%), Query Frame = 2 Query: 1046 QGAAETVDSLLRSGADETILNDEGKAAPDVV-----GLRFEEEEDLLAEDPDREHKLLANAPADRAWRRRGYLVLCRAHPDRV 1279 +G E VDSLLRSGADETIL+ EG+AA D++ GL E+D DR LL NA ADRAW RR YLVLCR HPDR Sbjct: 98 EGDTEVVDSLLRSGADETILDSEGRAAVDMISWEVAGLHLSGEQD------DRVRDLLVNAQADRAWHRRRYLVLCRTHPDRA 174
BLAST of mRNA_L-elsbetiae_contig616.14730.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 84.0 bits (206), Expect = 2.370e-13 Identity = 61/147 (41.50%), Postives = 89/147 (60.54%), Query Frame = 2 Query: 1064 VDSLLRSGADETILNDEGKAAPDVVGLRFEEEEDLLAE----DPDREHKLLANAPADRAWRRRGYLVLCRAHPDRVQQIQDISIAHASMARRTRSGAKLGRTEASGSSGAVDASPVDERGGGDWAVVMAMLLRLQEEGIFRAIVGYL 1492 V+ LLR GADE + N++G DVVG+ E+ DL E D R H++LA APADR+WRRRG+LVL R+ P RV I + S + +S++R + AK+ R GSS D +++ D ++ L+ L+ EG+FR +VG+L Sbjct: 370 VELLLRWGADEKLPNNDGDTPADVVGVL--EQNDLDDEEREADNQRIHRMLARAPADRSWRRRGWLVLSRSCPTRVH-IANGSSSSSSISRINGNSAKVARVSGQGSSR--DDEETEDQMMVDLRDLVGRLVGLEAEGLFRLVVGFL 511 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig616.14730.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig616.14730.1 >prot_L-elsbetiae_contig616.14730.1 ID=prot_L-elsbetiae_contig616.14730.1|Name=mRNA_L-elsbetiae_contig616.14730.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=425bp MANRDKREALRGEEEETFDLIAQVLTSKQWAELLKAPLERAVAKGNRGLAback to top mRNA from alignment at L-elsbetiae_contig616:4834..8674+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig616.14730.1 ID=mRNA_L-elsbetiae_contig616.14730.1|Name=mRNA_L-elsbetiae_contig616.14730.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3841bp|location=Sequence derived from alignment at L-elsbetiae_contig616:4834..8674+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig616:4834..8674+ >mRNA_L-elsbetiae_contig616.14730.1 ID=mRNA_L-elsbetiae_contig616.14730.1|Name=mRNA_L-elsbetiae_contig616.14730.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2550bp|location=Sequence derived from alignment at L-elsbetiae_contig616:4834..8674+ (Laminarionema elsbetiae ELsaHSoW15)back to top |