mRNA_L-elsbetiae_contig6151.14723.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6151.14723.1
Unique NamemRNA_L-elsbetiae_contig6151.14723.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6151.14723.1 vs. uniprot
Match: A0A6H5K2C6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2C6_9PHAE)

HSP 1 Score: 318 bits (815), Expect = 8.740e-107
Identity = 166/221 (75.11%), Postives = 179/221 (81.00%), Query Frame = 1
Query:    4 FCVGFVSLGLSLRLGLTLILFYKSSSILTKVGSKKKRTLTDDYKEGGQRGAVQVLSCSLFATVLAVVHAFLTGTGDSLVDFESEPLGGALLCAYLGFYACCAGDTWSSELGVLSKAAPRLVTRPWKTVPAGTNGGMSLLGTVASVAAGAVMGAGFVLFGCVFRLPPPGSHEGGSPSFSSTS-------QIPLVLLGALSGLAGSILDSLMGAILQESYYNT 645
            F VG VSLGLSLR GLTLILFYKSSSILTKVG ++K  LTDDYKEGGQRGA QVLSCSLFAT+LAV H  +TG GDSLVDFE +PL GALLCAYLGFYACCAGDTWSSELGVLSK  PRL+T+PWKTVP GTNGGMSL+GTVAS AAG VMGAGFV FG VFRL PP      SP             Q+PLVLLG +SGLAGSILDSLMGA+LQ SY++T
Sbjct:   43 FFVGLVSLGLSLRFGLTLILFYKSSSILTKVGFERKAKLTDDYKEGGQRGAAQVLSCSLFATILAVYHTVVTGAGDSLVDFEPDPLAGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLITKPWKTVPPGTNGGMSLMGTVASAAAGVVMGAGFVCFGWVFRLSPPSPAGHSSPXXXXXXXXXXXXXQLPLVLLGGVSGLAGSILDSLMGAVLQASYFDT 263          
BLAST of mRNA_L-elsbetiae_contig6151.14723.1 vs. uniprot
Match: D8LMW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW9_ECTSI)

HSP 1 Score: 260 bits (665), Expect = 6.140e-85
Identity = 131/154 (85.06%), Postives = 139/154 (90.26%), Query Frame = 1
Query:    4 FCVGFVSLGLSLRLGLTLILFYKSSSILTKVGSKKKRTLTDDYKEGGQRGAVQVLSCSLFATVLAVVHAFLTGTGDSLVDFESEPLGGALLCAYLGFYACCAGDTWSSELGVLSKAAPRLVTRPWKTVPAGTNGGMSLLGTVASVAAGAVMGAG 465
            F VG VSLGLSLRLGLTLILFYKSSSILTKVG ++K  LTDDYKEGGQRGA QVLSCSLFAT+LAV H  +TG GDSLVDFES+PL GALLCAYLGFYACCAGDTWSSELGVLSK  PRL+T+PWKTVP GTNGGMSL+GTVASVAAG VMGAG
Sbjct:   43 FFVGLVSLGLSLRLGLTLILFYKSSSILTKVGFERKAKLTDDYKEGGQRGAAQVLSCSLFATILAVHHTVVTGAGDSLVDFESDPLAGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLITKPWKTVPPGTNGGMSLMGTVASVAAGVVMGAG 196          
BLAST of mRNA_L-elsbetiae_contig6151.14723.1 vs. uniprot
Match: A0A7S2V002_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V002_9STRA)

HSP 1 Score: 245 bits (626), Expect = 1.120e-77
Identity = 140/255 (54.90%), Postives = 171/255 (67.06%), Query Frame = 1
Query:    4 FCVGFVSLGLSLRLGLTLILFYKSSSILTKVGSKKKRTLTDDYKEGGQRGAVQVLSCSLFATVLAVVHAFLTGTGDSL---VDFESEPLGGALLCAYLGFYACCAGDTWSSELGVLSKAAPRLVTRPWKTVPAGTNGGMSLLGTVASVAAGAVMGAGFVLFGCVFRLPPPGSHEGGSPSFSSTSQIPLVLLGALSGLAGSILDSLMGAILQESYYNTNRKAIVERPPASALATGDLALVCGRNILTNEQVNIFSV 759
            F VG VSL +S RLGLTLILFYKSSSILTKVG KKK  L D +   GQR A QVLSCS  A V+AV+  +L G  D L   V++ S P    LLCAYLG YACC GDTWSSELGVLS++ P L+T+PW+TVPAGTNGG+S +GT+A+ AAG V+GAGF+LFG +   P  G +              L+  G + GL GS+LDSLMGA LQ +YY+  +K I  +    +    D+  VCG +ILTNEQVN+ SV
Sbjct:   42 FFVGLVSLSISARLGLTLILFYKSSSILTKVGQKKKAQLDDHHVTDGQRTATQVLSCSGIACVVAVIMYYLEGE-DMLAMGVNYSSHPTTSFLLCAYLGHYACCNGDTWSSELGVLSRSPPILITQPWRTVPAGTNGGVSTMGTLAAGAAGVVIGAGFLLFGWMQGAPQDGQYL-------------LIPFGGMCGLLGSMLDSLMGATLQATYYDREKKCITSKVEGKS---SDVVRVCGYDILTNEQVNLLSV 279          
BLAST of mRNA_L-elsbetiae_contig6151.14723.1 vs. uniprot
Match: A0A7S2RII1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RII1_9STRA)

HSP 1 Score: 223 bits (569), Expect = 3.390e-69
Identity = 130/250 (52.00%), Postives = 158/250 (63.20%), Query Frame = 1
Query:   10 VGFVSLGLSLRLGLTLILFYKSSSILTKVGSKKKRTLTDDYKEGGQRGAVQVLSCSLFATVLAVVHAFLTGTGDSLVDFESEPLGGALLCAYLGFYACCAGDTWSSELGVLSKAAPRLVTRPWKTVPAGTNGGMSLLGTVASVAAGAVMGAGFVLFGCVFRLPPPGSHEGGSPSFSSTSQIPLVLLGALSGLAGSILDSLMGAILQESYYNTNRKAIVERPPASALATGDLALVCGRNILTNEQVNIFSV 759
            VGF+S   S R GL LI FY+SSS LTK   ++KR L   YKEGGQR A QV SCSL ATV+AVV   LT   D  VD  + P+  ALLCAYLG YACC GDTW+SELG L    PRLV  PW+ VP GTNGGMS LGT AS+A G  +G  FV+ G       P S  G      + SQ+PL+ LGA  G  GS++DS +GA LQ ++Y+  ++ IV   P+SA    D+  + G +IL+NEQVN  SV
Sbjct:   37 VGFLSFLASFRFGLVLIAFYQSSSSLTKFQGERKRRLEAGYKEGGQRDAEQVFSCSLLATVMAVVF-LLTQGEDQPVDSAAAPMRSALLCAYLGHYACCNGDTWASELGTLDSGLPRLVLAPWRKVPKGTNGGMSFLGTAASLAGGLFIGLVFVVCG-------PHSSPG------APSQLPLIALGAAGGFVGSLIDSFLGATLQATFYHREKRIIV---PSSASDNADVDRITGVDILSNEQVNALSV 269          
BLAST of mRNA_L-elsbetiae_contig6151.14723.1 vs. uniprot
Match: K8YV45_NANGC (Uncharacterized protein (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YV45_NANGC)

HSP 1 Score: 218 bits (556), Expect = 1.060e-66
Identity = 114/254 (44.88%), Postives = 164/254 (64.57%), Query Frame = 1
Query:   10 VGFVSLGLSLRLGLTLILFYKSSSILTKVGSKKKRTLTDDYKEGGQRGAVQVLSCSLFATVLAVVHAFLTGTGDSLVDFESEPLGGALLCAYLGFYACCAGDTWSSELGVLSKAAPRLVTRPWK-TVPAGTNGGMSLLGTVASVAAGAVMGAGFVLFGCVFRLPPPGSHEGGSPSFSSTSQIPLVLLGALSGLAGSILDSLMGAILQESYYNTNRKAIVERPPAS---ALATGDLALVCGRNILTNEQVNIFSV 759
            VGF+S+G SLR G  +ILFY+SSS+LT+   + K  L +D+K+GGQR A QVL+CS   T++AV   FL G  D  ++FE+ PL   LLCAY+G YACC GDTW+SE+G+LS ++PRLVT  ++  VP GTNGGMSL GT+AS+A GA++G G  + G V  +P   S  G  P +       + ++GA  G  GS+ DS++G + Q ++Y   +K +V+ P A          + L+ G ++L+NE VN+ S+
Sbjct:   62 VGFLSMGASLRFGALMILFYQSSSMLTRYRCETKALLEEDHKQGGQRSAAQVLACSFLGTLIAVAFVFLLGPDDLPLNFEASPLRSRLLCAYVGHYACCNGDTWASEIGILSPSSPRLVTAGFRRVVPRGTNGGMSLTGTLASIAGGALIGTGHSILGFVLGMPDDASGAGWCPGWFF-----MTVIGAACGFIGSLSDSILGGLFQATWYCAEKKRVVKHPTAQERQGRGAEQVRLISGLDLLSNEHVNLISI 310          
BLAST of mRNA_L-elsbetiae_contig6151.14723.1 vs. uniprot
Match: A0A7S2U2Q7_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2U2Q7_9EUKA)

HSP 1 Score: 213 bits (543), Expect = 3.850e-65
Identity = 123/249 (49.40%), Postives = 153/249 (61.45%), Query Frame = 1
Query:   10 VGFVSLGLSLRLGLTLILFYKSSSILTKVGSKKKRTLTDDYKEGGQRGAVQVLSCSLFATVLAVVHAFLTGTGDSLVDFESEPLGGALLCAYLGFYACCAGDTWSSELGVLSKAAPRLVTRPWKTVPAGTNGGMSLLGTVASVAAGAVMGAGFVLFGCVFRLPPPGSHEGGSPSFSSTSQIPLVLLGALSGLAGSILDSLMGAILQESYYNTNRKAIVERPPASALATGDLALVCGRNILTNEQVNIFS 756
            VG ++LG++ R GLTL+LFY SSS LTK+G   K  L + + +  QRGA QVLSCS+   VLA+V+A L G+ D  VD+++ P G  LLCAYLGF+ACC GDTW+SELG LSKA    +      VP GTNGG+S LGT AS+A G  +G  +V+ G  F +             SS  Q PLVL G   G  GS+LDS MGA LQES+     K IV+ PP           +CG NILTNEQVN+ S
Sbjct:   45 VGGITLGITWRFGLTLLLFYGSSSQLTKIGKHAKDKLEEGHSKESQRGATQVLSCSMTGVVLAIVYASLVGSDDIPVDYDTNPTGSFLLCAYLGFFACCNGDTWASELGTLSKAKSATLITTLSDVPKGTNGGISFLGTAASIAGGGFIGLVYVVVG-FFTV----------EKKSSVPQWPLVLFGMGMGALGSVLDSFMGATLQESWMCRRTKKIVKPPPMK----DTYVKICGMNILTNEQVNLVS 278          
BLAST of mRNA_L-elsbetiae_contig6151.14723.1 vs. uniprot
Match: A0A4D9D7M6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7M6_9STRA)

HSP 1 Score: 212 bits (539), Expect = 5.320e-65
Identity = 111/249 (44.58%), Postives = 159/249 (63.86%), Query Frame = 1
Query:   25 LGLSLRLGLTLILFYKSSSILTKVGSKKKRTLTDDYKEGGQRGAVQVLSCSLFATVLAVVHAFLTGTGDSLVDFESEPLGGALLCAYLGFYACCAGDTWSSELGVLSKAAPRLVTRPWK-TVPAGTNGGMSLLGTVASVAAGAVMGAGFVLFGCVFRLPPPGSHEGGSPSFSSTSQIPLVLLGALSGLAGSILDSLMGAILQESYYNTNRKAIVERPPAS---ALATGDLALVCGRNILTNEQVNIFSV 759
            +G SLR G  +ILFY+SSSILT+   + K  L +D+K+GGQR A QVL+CS   T++AV   FL G  D  ++FE+ PL   LLCAY+G YACC GDTW+SE+G+LS ++PRLVT  ++  VP GTNGGMSL GT+AS+A GA++G G  + G V  +P   S  G  P +       + ++GA  G  GS+ DS++G + Q ++Y   +K +V+ P A          + L+ G ++L+NE VN+ S+
Sbjct:    1 MGASLRFGALMILFYQSSSILTRFRCETKALLEEDHKQGGQRSAAQVLACSFLGTLIAVAFVFLLGPDDLPLNFEASPLRSRLLCAYVGHYACCNGDTWASEIGILSPSSPRLVTAGFRRVVPRGTNGGMSLTGTLASIAGGALIGTGHSILGFVLGMPDDASGAGWCPGWFF-----MTVIGAACGFIGSLSDSILGGLFQATWYCAEKKRVVKHPTAQERQGRGAEQVRLISGLDLLSNEHVNLISI 244          
BLAST of mRNA_L-elsbetiae_contig6151.14723.1 vs. uniprot
Match: M4C455_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C455_HYAAE)

HSP 1 Score: 196 bits (499), Expect = 1.050e-58
Identity = 116/250 (46.40%), Postives = 151/250 (60.40%), Query Frame = 1
Query:    7 CVGFVSLGLSLRLGLTLILFYKSSSILTKVGSKKKRTLTDDYKEGGQRGAVQVLSCSLFATVLAVVHAFLTGTGDSLVDFESEPLGGALLCAYLGFYACCAGDTWSSELGVLSKAAPRLVTRPWKTVPAGTNGGMSLLGTVASVAAGAVMGAGFVLFGCVFRLPPPGSHEGGSPSFSSTSQIPLVLLGALSGLAGSILDSLMGAILQESYYNTNRKAIVERPPASALATGDLALVCGRNILTNEQVNIFS 756
            CVGF +L    R G+ L+ FY S S LTKV +  K+ L  +YK+GGQR A QVL+CSL AT++AV      G  D  +DFES P    LL +Y+G YACCA DTW+SELGVLSK+ PRL+   WK VP GTNGG+S+LG   S   GA +GA   L+     L             S T+Q+ +V LGA++GL GS LDS++GA LQ +YY+   + I +  P        +  +CGR  L+NEQVN+ S
Sbjct:   38 CVGFFTLASGYRFGVLLLGFYFSGSKLTKVRASVKQQLDANYKQGGQRSARQVLACSLVATLIAVYFVVRFGHDDVALDFESAPESSFLLASYIGHYACCAADTWASELGVLSKSEPRLIMT-WKRVPPGTNGGVSVLGLAVSALGGAFIGA---LYFATSLL-------------SGTAQLHVVTLGAVTGLFGSALDSILGATLQATYYDRATRKICDEAP-------HVEHICGRKWLSNEQVNVVS 263          
BLAST of mRNA_L-elsbetiae_contig6151.14723.1 vs. uniprot
Match: A0A7S2N4E0_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2N4E0_9EUKA)

HSP 1 Score: 195 bits (495), Expect = 3.620e-58
Identity = 111/251 (44.22%), Postives = 152/251 (60.56%), Query Frame = 1
Query:    4 FCVGFVSLGLSLRLGLTLILFYKSSSILTKVGSKKKRTLTDDYKEGGQRGAVQVLSCSLFATVLAVVHAFLTGTGDSLVDFESEPLGGALLCAYLGFYACCAGDTWSSELGVLSKAAPRLVTRPWKTVPAGTNGGMSLLGTVASVAAGAVMGAGFVLFGCVFRLPPPGSHEGGSPSFSSTSQIPLVLLGALSGLAGSILDSLMGAILQESYYNTNRKAIVERPPASALATGDLALVCGRNILTNEQVNIFS 756
            F V  ++   SLR G+TL++FYK+ S+LTKVG+  K  L D Y   GQRGA QVL+CS  A   AV    L GT   +   + + LG  L  A++ F+ACCAGDT++SELG+LS++ PR+VT+PWK  P GTNGG++ LGT+AS   G  MG    +F  +  L PP +HE  +          L  +G L+G+ GSILDSL+GA +Q +YY+  RK IV++  A+         V G  +L+NE VN  S
Sbjct:   21 FVVAALAFSCSLRSGMTLLVFYKTGSMLTKVGASVKNKLEDGYAAEGQRGASQVLACSAIAVACAVARRLLVGTDGPIDLADVQCLGNRLTLAFVAFFACCAGDTYASELGILSRSPPRIVTQPWKVAPPGTNGGITALGTLASAGGGVCMGLCHAVF--LGPLLPPSAHECAA----------LTYVGLLAGVGGSILDSLLGATVQATYYDEERKLIVKKQSAATKC------VSGFPLLSNEMVNFVS 253          
BLAST of mRNA_L-elsbetiae_contig6151.14723.1 vs. uniprot
Match: A0A6G0W4C5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W4C5_9STRA)

HSP 1 Score: 195 bits (496), Expect = 3.640e-58
Identity = 118/252 (46.83%), Postives = 155/252 (61.51%), Query Frame = 1
Query:    4 FCVGFVSLGLSLRLGLTLILFYKSSSILTKVGSKKKRTLTDDYKEGGQRGAVQVLSCSLFATVLAVVHAFLTGTGDSLVDFESEPLGGALLCAYLGFYACCAGDTWSSELGVLSKAAPRLVTRPWKTVPAGTNGGMSLLGTVASVAAGAVMGAGFVLFGCVFRLPPPGSHEGGSPSFSSTSQIPLVLLGALSGLAGSILDSLMGAILQESYYNTNRKAIVERPPASALATGDLALVCGRNILTNEQVNIFSV 759
            FCVG VS+G   R G+ L+LFY +SS +T     +K  +    KEGGQR A+QVLS SL A  LA+ +    G  D  +D    PL   L  AY+  YACCA DTW+SELGVLSK++P L+TR  KTVP GTNGG+SLLGT A+ A G  +G  F L+  +F            P+ +ST Q P V LG +SGL G +LDS++GA +Q ++Y T    IV +P    + + D+ L+ G +ILTNEQVN+ SV
Sbjct:   38 FCVGSVSMGCGYRFGILLLLFYFTSSKMTHYREDQKAKMDASTKEGGQRSAIQVLSVSLIACGLAITYVSQVGE-DRPID--GTPLPTMLWGAYIAHYACCAADTWASELGVLSKSSPVLITR-CKTVPPGTNGGISLLGTAAAAAGGTFIGVLFYLYDLLFL-----------PAVASTPQWPAVFLGLVSGLIGCMLDSILGATVQSTFYCTRTNRIVPQPH---IPSADVVLISGYDILTNEQVNVVSV 271          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6151.14723.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K2C6_9PHAE8.740e-10775.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMW9_ECTSI6.140e-8585.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2V002_9STRA1.120e-7754.90Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2RII1_9STRA3.390e-6952.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
K8YV45_NANGC1.060e-6644.88Uncharacterized protein (Fragment) n=2 Tax=Nannoch... [more]
A0A7S2U2Q7_9EUKA3.850e-6549.40Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A4D9D7M6_9STRA5.320e-6544.58Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
M4C455_HYAAE1.050e-5846.40Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A7S2N4E0_9EUKA3.620e-5844.22Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A6G0W4C5_9STRA3.640e-5846.83Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6151contigL-elsbetiae_contig6151:2932..6283 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score260.4
Seed ortholog evalue8.8e-67
Seed eggNOG ortholog2880.D8LMW9
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.PFAM Integral membrane protein DUF92
EggNOG OGsCOG1836@1,KOG4491@2759
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionputative transmembrane protein
Ec32 orthologEc-02_003920.1
Exons6
Model size759
Cds size759
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6151.14723.1prot_L-elsbetiae_contig6151.14723.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6151 2932..6283 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816673.673531-CDS-L-elsbetiae_contig6151:2931..30461622816673.673531-CDS-L-elsbetiae_contig6151:2931..3046Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6151 2932..3046 -
1691683729.9755347-CDS-L-elsbetiae_contig6151:2931..30461691683729.9755347-CDS-L-elsbetiae_contig6151:2931..3046Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6151 2932..3046 -
1622816673.6862087-CDS-L-elsbetiae_contig6151:3375..35561622816673.6862087-CDS-L-elsbetiae_contig6151:3375..3556Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6151 3376..3556 -
1691683729.987836-CDS-L-elsbetiae_contig6151:3375..35561691683729.987836-CDS-L-elsbetiae_contig6151:3375..3556Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6151 3376..3556 -
1622816673.696303-CDS-L-elsbetiae_contig6151:4004..40741622816673.696303-CDS-L-elsbetiae_contig6151:4004..4074Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6151 4005..4074 -
1691683730.0091507-CDS-L-elsbetiae_contig6151:4004..40741691683730.0091507-CDS-L-elsbetiae_contig6151:4004..4074Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6151 4005..4074 -
1622816673.7075162-CDS-L-elsbetiae_contig6151:4918..49911622816673.7075162-CDS-L-elsbetiae_contig6151:4918..4991Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6151 4919..4991 -
1691683730.020058-CDS-L-elsbetiae_contig6151:4918..49911691683730.020058-CDS-L-elsbetiae_contig6151:4918..4991Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6151 4919..4991 -
1622816673.7212179-CDS-L-elsbetiae_contig6151:5489..56741622816673.7212179-CDS-L-elsbetiae_contig6151:5489..5674Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6151 5490..5674 -
1691683730.0380738-CDS-L-elsbetiae_contig6151:5489..56741691683730.0380738-CDS-L-elsbetiae_contig6151:5489..5674Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6151 5490..5674 -
1622816673.7313166-CDS-L-elsbetiae_contig6151:6148..62831622816673.7313166-CDS-L-elsbetiae_contig6151:6148..6283Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6151 6149..6283 -
1691683730.0586276-CDS-L-elsbetiae_contig6151:6148..62831691683730.0586276-CDS-L-elsbetiae_contig6151:6148..6283Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6151 6149..6283 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6151.14723.1

>prot_L-elsbetiae_contig6151.14723.1 ID=prot_L-elsbetiae_contig6151.14723.1|Name=mRNA_L-elsbetiae_contig6151.14723.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=253bp
GFCVGFVSLGLSLRLGLTLILFYKSSSILTKVGSKKKRTLTDDYKEGGQR
GAVQVLSCSLFATVLAVVHAFLTGTGDSLVDFESEPLGGALLCAYLGFYA
CCAGDTWSSELGVLSKAAPRLVTRPWKTVPAGTNGGMSLLGTVASVAAGA
VMGAGFVLFGCVFRLPPPGSHEGGSPSFSSTSQIPLVLLGALSGLAGSIL
DSLMGAILQESYYNTNRKAIVERPPASALATGDLALVCGRNILTNEQVNI
FSV
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mRNA from alignment at L-elsbetiae_contig6151:2932..6283-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6151.14723.1 ID=mRNA_L-elsbetiae_contig6151.14723.1|Name=mRNA_L-elsbetiae_contig6151.14723.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3352bp|location=Sequence derived from alignment at L-elsbetiae_contig6151:2932..6283- (Laminarionema elsbetiae ELsaHSoW15)
GGGTTTTGCGTGGGTTTCGTCTCCCTCGGGTTGTCTCTGCGGCTGGGCCT CACCCTCATCCTGTTCTACAAGTCGAGCTCCATCCTCACCAAGGTCGGCT CCAAGAAGAAAAGGACGCTCACCGATGACTACAAGGTGAGGTCGCTAGTC GATATTTCACGCGCGTTCTGCTGCAACTGCAACCTTCTGCTGTTGAAAGC AGATCGTCCCATGAGTATCGCCTGTGCATGTAGCGGGTGTGGCTTCTCCA CCTAGGGAATCTTCTTGGCGCGTATGTATGTATTTACCCCGCTTCCGTCT TCGTACGCCTTCGTTTTTGATTTTGGTGCTCACCATCTGTTTTATTTTTG CTCTGCTGGCCCTTCGGGTCCATTTCATTTTTCGTGTACCTTTTCTTGGG GTATAAGTTAGCCTGTGACCACGGGAATTGACCGCATCAAGTGTTGGAGT AGTACGGACATTGAGAGGTACTGAATGGAGAGATCGGAACGGTTTTTAAT GTGAAGATAACATACATAGATACATACAACAACCGCACCAAATCTAGGCA GGGCTGAAAACGCACGCGTACTTGACGCATTTTTCTTCTCTGCCCTTCCC CAACCCTAGGAGGGAGGCCAACGCGGTGCCGTCCAAGTTCTGTCCTGCAG CCTCTTCGCTACCGTTTTGGCGGTTGTTCACGCGTTTCTTACCGGCACCG GGGACAGCCTGGTGGACTTTGAGTCCGAGCCGCTGGGCGGAGCGCTGCTC TGCGCCTACCTCGGGTTCTACGCCTGCTGCGCTGGGGACACGTGGTGAGG GCCCAAGCCGCCGGCGCACGTGGTTGCGGCTGGGGCGCGGTTTTGCGTCG TCACGTGCGGTCGTGGTATTGTACGACTGCCTGTTTTGGCGTTCTGTTTT TTTTGCTGATCTTCTTTTTGTTTCTCGAGTTGTGAACCTGCTGCGCTGGC AACGCACTCTACAGAGGACCGAAGCACATCGGAGGTGTAGGAGAATGTTG CTTCAGTGTAGCTTTCGCGTTTTTTTACCCTTGGCATCTCTCTCCGTCGT GTGGTTTAAAGTTAAAACAAAATAAAAATGTGAATATGTAAACGGTGACG CTTACTTACCCCGTCTTCTCCGCCACATCACAAGGCTTGTATTTCGCGTG GCAGTCCGTGCCAATACGGCACGAAGCCGCGCACCTGCGTGCATACCCTC CCAAGCGCCAAAGGTTCGCTGACATTTTCTCCCACCGCGTTGGCGTATCG CCCCATTGGCGTGGTTGTTTGGTTGGTATCTGTGTGTGCCAGGAGCTCGG AGCTTGGGGTCCTGAGCAAGGCAGCCCCCCGATTGGTCACCAGGCCCTGG AAAACAGTCCCAGCCGTGAGTGGCAATAATTTTACAGCGCACAGTGTACC TTTTCTTAGGTATAAGTTAGCCTGTGACCACGGGAATTGACCGCATCAAG TGTTGGATTAGTACGGACATTGAGAGGTACTGGATGGAGAGATCGGAACG GTTTTTAATGTGAAGACAACATCAACAACAACAACAGCAGCAGTGGTGGC TAAACTATTGCGTTGAATTGAGGACAGGCCTGCCAGCCGAGGGAGAGAAG CTCGAAATGGTTTCATCAAGTGCTTGATGTGTGCAACTTACTTTTAGTGA CACAAATCTTAGTTTCTCCAGAATCATCTTCGAATCGCATAACAACATTC AACATTGGGAGGGCACTCTGTGTGTTTAATCTTGTGTGTGTGTATGTGTG TGTGTGTGCGTTTTATTTTTTATTTATTTTTTGGTTACACATCATGCTTG CGCGCGTAGCAAAATGGTTGCGTGCTGTGGCCAAAGGGTGTGTTTCTGGA TTGGCTGTCGCCACGTATCGACGGCTCCGAAAAGTGCAAGATTTCGAACA GAGCGCGAGTCAGATGCGTTACAACAGGCAGGCGGCGGCCCTCTGAAGCC CTGTAAGAAATTAAGCTTTCTCTCTCGCTGGTGTTCCCCAAGTGAAAGTC TATGTTAGTGCACCAGACTTCGTCAGTCGGTCTCGTGTTCCCTTGTCCCC AACGCAACCCGTTTTTGGCAAATTGAGTTTTTCACGGCGTCGTGTGTCTG TTTTGCGTGTGGGGGTGTGGGCGTACTACTACTGCAGGCAAACGCGTGTT TCAAGCAGATTCCCCACTGCGCCTCGACCTTTTCGTTTGTGATTGATTGA TTGGTGCAGGGGACGAACGGGGGGATGTCGCTGCTAGGAACGGTGGCATC GGTGGCCGCCGGTGCTGTGATGGGTGCCGGTGCGTGCACTCCGCGCACGT GAAACAATACCGAGTTCAGTCATAATCTTGATCTTTGCGTCTTTCCGACC GAGGAGTGGCGTTTGTTTAGAGGAAGGCCGGGAGCAAAAAGTGCACGAAG CGTTAGCGTGGAGGCATTTTCGAAGCTACACAGGCTGTTGATAGTGGAGC GGGATTGACTTTTCCACCCCTGTACTACATAGGCCGAGAAGCCGCAAAAT GATTTAGCCTGGGTTATCCGTCCGCGGTACTGGCGCAACCGAGCTTAGTC TTGGCCCTCATACGAACGTACACCATATCAGTAACGGCTCTACCAACCGG TATCCTGGGGCCACCGCACGATCCCAATCAGCTCCTTGGCCGCCGTCACC CGTCTCCCACAGCCACGAGGCCACGCTTCCGATTTACTCGTTCTCTTGTC TCCCCCTTCTCTCTTGCTGTTCCCAAGGCTTTGTGCTTTTCGGTTGTGTG TTTCGGCTGCCCCCGCCCGGGTCCCACGAGGGTGGCTCGCCCTCCTTTTC CTCGACTTCCCAGATTCCCTTGGTCTTACTTGGAGCGTTGAGCGGACTGG CGGGCTCCATCCTTGACTCCCTCATGGGGGCCATCCTTCAGGAGTCGTAC TACAACACGTGAGCGCCCTGTTCTCAGAACTCTTTTTTGTCGCTCCGTAC GGTGAGCTAGCTGCATGTCGCTGCGCGGCTTTTCCCTGATATGCGTGGCG GTGTCGGTGCTATTTGTACGTAGGTAGGCCGTGCGACGCTGTACCGTGCG GGCTTTACCCCCACACCGTTACTTTGGTTTGTTTCGGGTGTTGTTGGACC TGTTGTACCGCGTGGAATGGGCTGTCATTGCCGCCGTGCGCTCCTTTGCG CAGCTCTGCGCAGGCCTTTGCTTTTCGAAATTGTGACCTTACCCCGTGTC GTTGATGCCTTGTGAACTGAAACAACGGACACGGCAGGAACCGCAAGGCG ATCGTCGAAAGACCGCCGGCGTCTGCGCTTGCCACGGGGGATCTGGCACT TGTGTGCGGTCGAAATATCTTAACCAATGAGCAAGTCAACATCTTTTCGG TG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6151:2932..6283-

>mRNA_L-elsbetiae_contig6151.14723.1 ID=mRNA_L-elsbetiae_contig6151.14723.1|Name=mRNA_L-elsbetiae_contig6151.14723.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1518bp|location=Sequence derived from alignment at L-elsbetiae_contig6151:2932..6283- (Laminarionema elsbetiae ELsaHSoW15)
GGGTTTTGCGTGGGTTTCGTCTCCCTCGGGTTGTCTCTGCGGCTGGGCCT
CACCCTCATCCTGTTCTACAAGTCGAGCTCCATCCTCACCAAGGTCGGCT
CCAAGAAGAAAAGGACGCTCACCGATGACTACAAGGGGTTTTGCGTGGGT
TTCGTCTCCCTCGGGTTGTCTCTGCGGCTGGGCCTCACCCTCATCCTGTT
CTACAAGTCGAGCTCCATCCTCACCAAGGTCGGCTCCAAGAAGAAAAGGA
CGCTCACCGATGACTACAAGGAGGGAGGCCAACGCGGTGCCGTCCAAGTT
CTGTCCTGCAGCCTCTTCGCTACCGTTTTGGCGGTTGTTCACGCGTTTCT
TACCGGCACCGGGGACAGCCTGGTGGACTTTGAGTCCGAGCCGCTGGGCG
GAGCGCTGCTCTGCGCCTACCTCGGGTTCTACGCCTGCTGCGCTGGGGAC
ACGTGGAGGGAGGCCAACGCGGTGCCGTCCAAGTTCTGTCCTGCAGCCTC
TTCGCTACCGTTTTGGCGGTTGTTCACGCGTTTCTTACCGGCACCGGGGA
CAGCCTGGTGGACTTTGAGTCCGAGCCGCTGGGCGGAGCGCTGCTCTGCG
CCTACCTCGGGTTCTACGCCTGCTGCGCTGGGGACACGTGGAGCTCGGAG
CTTGGGGTCCTGAGCAAGGCAGCCCCCCGATTGGTCACCAGGCCCTGGAA
AACAGTCCCAGCCGAGCTCGGAGCTTGGGGTCCTGAGCAAGGCAGCCCCC
CGATTGGTCACCAGGCCCTGGAAAACAGTCCCAGCCGGGACGAACGGGGG
GATGTCGCTGCTAGGAACGGTGGCATCGGTGGCCGCCGGTGCTGTGATGG
GTGCCGGGGACGAACGGGGGGATGTCGCTGCTAGGAACGGTGGCATCGGT
GGCCGCCGGTGCTGTGATGGGTGCCGGCTTTGTGCTTTTCGGTTGTGTGT
TTCGGCTGCCCCCGCCCGGGTCCCACGAGGGTGGCTCGCCCTCCTTTTCC
TCGACTTCCCAGATTCCCTTGGTCTTACTTGGAGCGTTGAGCGGACTGGC
GGGCTCCATCCTTGACTCCCTCATGGGGGCCATCCTTCAGGAGTCGTACT
ACAACACGCTTTGTGCTTTTCGGTTGTGTGTTTCGGCTGCCCCCGCCCGG
GTCCCACGAGGGTGGCTCGCCCTCCTTTTCCTCGACTTCCCAGATTCCCT
TGGTCTTACTTGGAGCGTTGAGCGGACTGGCGGGCTCCATCCTTGACTCC
CTCATGGGGGCCATCCTTCAGGAGTCGTACTACAACACGAACCGCAAGGC
GATCGTCGAAAGACCGCCGGCGTCTGCGCTTGCCACGGGGGATCTGGCAC
TTGTGTGCGGTCGAAATATCTTAACCAATGAGCAAGTCAACATCTTTTCG
GTGGAACCGCAAGGCGATCGTCGAAAGACCGCCGGCGTCTGCGCTTGCCA
CGGGGGATCTGGCACTTGTGTGCGGTCGAAATATCTTAACCAATGAGCAA
GTCAACATCTTTTCGGTG
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