mRNA_L-elsbetiae_contig6143.14713.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6143.14713.1
Unique NamemRNA_L-elsbetiae_contig6143.14713.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6143.14713.1 vs. uniprot
Match: D7FQ59_ECTSI (DNA-(apurinic or apyrimidinic site) endonuclease n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ59_ECTSI)

HSP 1 Score: 478 bits (1229), Expect = 3.100e-162
Identity = 268/461 (58.13%), Postives = 311/461 (67.46%), Query Frame = 1
Query:  187 GMTTGAEESQDTPEASLADTQXXXXXSAAGKPNTGKRKKA--KAKLPIFTERDAIVRRESLASGKSFTVLSWNVNGIRATAGKGLETLRGLVKEEKPDLVCFQETKIQEVDVDVKKHRLRDLLPGYVSEWNCSHPKKGYSGTAVFFPKQDESWYGKGGAKGXXXXXXXPSDEPAKKKLKQGKISSFFSATPKQKQRSTKGKMPTPLPAAESAASSSNGAATEEAAVSQEDSPSPLPGGLSGLKVLGVRFGIGGDAKHNTEGRAITVEYEKLFVVTVYVPNSGDGLVRLKYRTDEWDPQLQSYVKALGKE-KPVVLNGDLNVAHLDLDVYNRGAPHLPKNAATTKEERESFGEWMRNGKVSDAFRRLHPQADGAYTYWSVRANNRPGNKGLRLDYFVCSDSLFEEDGEXXXXXXXXXXXXXXXXXXXXXETG---LVVHECFIIDKATVGLSDHCPIGITLR 1551
            GMTT AEESQDTP  S  DTQ   XX                KA+LPIFT+RD I R    ++G +FTVLSWNVNG+RATA KGLE LR +V++E PD+VC QETKIQE DV+    R +D+LPGY SEW+CS  K GYSGTAVFF KQ + W G GG          PSDEPA+KKLKQGKIS+FFS  P +K                         A+  +A S       LPGG SG KVL VRFGIGGD+KHN EGR+ITVEYEK FVVTVYVPNSG+ LVRL YRT EWD  L++YV++L  + KPVVLNGDLNVAHLDLD+YNRGA HLPKNAATTKEER+SF  W+  GKVSDAFRRLHP A+GAYTYWSVR   RP N+GLRLDYFVCS+++FE+                         TG   +VVH+CF++D+ATVG+SDHCPIGITLR
Sbjct:   10 GMTTAAEESQDTPGDSFDDTQELKXXXXXXXXXXXXXXXXXXKAELPIFTKRDPIDRVPFPSTGTTFTVLSWNVNGVRATAKKGLEPLRRMVEKEMPDIVCLQETKIQEKDVEAL--RAQDILPGYASEWSCSRTKLGYSGTAVFFTKQSDPWKGDGGGI-DATGNGLPSDEPARKKLKQGKISTFFSPKPSKKSAXXXXXXXXXXXXXXXXXXXXXXXASTNSADS-------LPGGRSGFKVLSVRFGIGGDSKHNNEGRSITVEYEKFFVVTVYVPNSGEKLVRLDYRTKEWDVALKAYVESLEAQGKPVVLNGDLNVAHLDLDIYNRGAKHLPKNAATTKEERDSFDSWVNGGKVSDAFRRLHPDAEGAYTYWSVRTGARPVNRGLRLDYFVCSNAVFEDGAAGGGQAKATARRAKGSAPKGKGATGAKGMVVHDCFMLDEATVGVSDHCPIGITLR 460          
BLAST of mRNA_L-elsbetiae_contig6143.14713.1 vs. uniprot
Match: A0A835YNZ2_9STRA (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNZ2_9STRA)

HSP 1 Score: 302 bits (773), Expect = 5.490e-94
Identity = 183/426 (42.96%), Postives = 223/426 (52.35%), Query Frame = 1
Query:  328 TERDAIVRRES--LASGKSFTVLSWNVNGIRATAGKGLETLRGLVKEEKPDLVCFQETKIQEVDVDVKKHRLRDLLPGYVSEWNCSHPKKGYSGTAVFFPKQDESWYGKGGAKGXXXXXXXPSDEPAKKKLKQGKISSFFSATPKQKQRSTKGKMPTPLPAAESAASSSNGAATEEAAVSQEDSPSPLPG----GLSGLKVLGVRFGIGGDAKHNTEGRAITVEYEKLFVVTVYVPNSGDGLVRLKYRTDEWDPQLQSYVKALGKE-KPVVLNGDLNVAHLDLDVYNRGAPHLPKNAATTKEERESFGEWMRNGK---------VSDAFRRLHPQADGAYTYWSVRANNRPGNKGLRLDYFVCSDSLFEEDGEXXXXXXXXXXXXXXXXXXXXXETGLVVHECFIIDKATVGLSDHCPIGITLRLP 1557
            TERD   RR +      + F  LSWNVNG+R T     E L  L   E+PDL+C QETK+QE+ V         LLPGY + W+CS  KKGYSGT VF  K            G                 KQ K+++FF  +                             A++  A + +D  +P  G    G S  KV+GVR GIG DA H  EGRAIT+EYEK FVV +YVPNSG  L RL+YRT  WDP L+++V AL  E KPV++ GDLNVAHLDLD+YN GAPHL K A  T  ER SF  W+             V DAFR L+P A G YTYWS R   R  NKGLRLDYF+C+ SL  ++G+                     +T  +VH+ F  D  TVGLSDHCP+G+ LRLP
Sbjct:   57 TERDPTPRRPTPGFPGPRYFKALSWNVNGLRGTLRNAPEALSALAARERPDLLCLQETKLQEMHVA----DFAALLPGYDAHWSCSTKKKGYSGTVVFTAKPPAETARAAAENGSR---------------KQAKLTAFFGKS-----------------------------ASDAVAAAAKDDVAPEAGPIVTGGSAPKVVGVRHGIGADADHGGEGRAITIEYEKFFVVCLYVPNSGQSLERLEYRTTSWDPALRAFVAALEAEGKPVIVTGDLNVAHLDLDIYNAGAPHLKKQAGCTPAERASFDAWVNPAAAEAAPGAPHVRDAFRHLYPAARGCYTYWSARKAGRDTNKGLRLDYFLCTPSLLPKEGQPSAEAAPAELPDSSESSS---DTVPIVHDVFHDDITTVGLSDHCPVGLILRLP 431          
BLAST of mRNA_L-elsbetiae_contig6143.14713.1 vs. uniprot
Match: A0A061QUM9_9CHLO (DNA-(apurinic or apyrimidinic site) endonuclease (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QUM9_9CHLO)

HSP 1 Score: 283 bits (724), Expect = 2.710e-87
Identity = 173/401 (43.14%), Postives = 209/401 (52.12%), Query Frame = 1
Query:  352 RESLASGKSFTVLSWNVNGIRATAGKGLETLRGLVKEEKPDLVCFQETKIQEVDVDVKKHRLRDLLPGYVSEWNCSHPKKGYSGTAVFFPKQDESWYGKGGAKGXXXXXXXPSDEPAKKKLKQGKISSFFSATPKQKQRSTKGKMPTPLPAAESAASSSNGAATEEAAVSQEDSPSPLPGGLSGLKVLGVRFGIGGDAK-HNTEGRAITVEYEKLFVVTVYVPNSGDGLVRLKYRTDEWDPQLQSYVKALGKEKPVVLNGDLNVAHLDLDVYNRGAPHLPKNAATTKEERESFGEWMRNGKVSDAFRRLHPQADGAYTYWSVRANNRPGNKGLRLDYFVCSDSLFEED-GEXXXXXXXXXXXXXXXXXXXXXETGLVVHECFIIDKATVGLSDHCPIGITL 1548
            R+    G  F  +SWNVNG+RA   K  E L  +V+ EKPD +C QE K+Q  DVD  K +L  LLPGY S WN +  KKGYSGT V           KG +K                  KQ  I+SFF                              G A  EAA S+           +GL ++GV + + G+A  H  EGR ITVEYEK FVV  YVPNSG  L RL+YRT +WD  LQ+Y+ ALG  KP +L GDLNVAHLD+D+YN  A H+PK A TT EER SFGE +  G V DAFR LH    G YT+WS RA NR  N+GLRLDY + S  L     GE                       G  +H+C+I+D ATVG SDHCP+ +TL
Sbjct:   64 RQQTPEGPYFKAISWNVNGLRALLSKNSEKLVSIVEAEKPDYICLQEHKLQVQDVDDAKLKLEKLLPGYTSFWNTATAKKGYSGTVVIVRTPASGALPKGSSK------------------KQKGIASFF-----------------------------KGQAKAEAAPSEAG---------TGLPIVGVTYDMDGEANLHKGEGRLITVEYEKFFVVGAYVPNSGMKLERLEYRTKQWDRDLQAYLGALGARKPTILTGDLNVAHLDIDIYNVAAKHVPKGACTTPEERASFGELLGAGFV-DAFRHLHAGVKGCYTFWSTRAGNRRTNRGLRLDYCLVSRELCRGAIGE-----------------------GPALHDCWILDDATVGASDHCPVAVTL 384          
BLAST of mRNA_L-elsbetiae_contig6143.14713.1 vs. uniprot
Match: A0A7S3H8Q9_9STRA (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H8Q9_9STRA)

HSP 1 Score: 259 bits (661), Expect = 7.470e-78
Identity = 156/401 (38.90%), Postives = 210/401 (52.37%), Query Frame = 1
Query:  361 LASGK-SFTVLSWNVNGIRATAGKGLETLRGLVKEEKPDLVCFQETKIQEVDVDVKKHRLRDLLPGYVSEWNCSHPKKGYSGTAVFFPKQDESWYGKGGAKGXXXXXXXPSDEPAKKKLKQGKISSFFSATPKQKQRSTKGKMPTPLPAAESAASSSNGAATEEAAVSQEDSPSPLPGGLSGLKVLGVRFGIGGDAKHNTEGRAITVEYEKLFVVTVYVPNSGDGLVRLKYRTDEWDPQLQSYVKALGKEKPVVLNGDLNVAHLDLDVYNRGAPHLPKNAATTKEERESFGEWMRNGKVSDAFRRLHPQADGAYTYWSVRANNRPGNKGLRLDYFVCSDSLFE--EDGEXXXXXXXXXXXXXXXXXXXXXETGLVVHECFIIDKATVGLSDHCPIGITLRL 1554
            LA G  S  ++SWNVNG+R+ A     TL  ++KE+KPD++C QETKIQ+  +        + L GY S WNCS  KKGYSGTAVF  K            G       P         KQ K+S+FF           K  +P P+                E  +SQE    P  G +S ++ +   F   G  + N EGR ITVE+    +V  YVPNSG+ L RL YR +EW+P ++ Y+K L   KPVV  GDLN  HLDLD++N  A H+PK +  T  ER +F + ++  +  DAFR  +P A G +TYWSVRA NRP NKG+RLDYF+CS  +F   E GE                      T ++ H+ +I+ K TVG SDHCP+ + +++
Sbjct:   41 LADGAISLKIVSWNVNGLRSLATTNKATLLNVIKEQKPDILCLQETKIQDNTIG----DYDNFLDGYESYWNCSTDKKGYSGTAVFLKKSTILINPSSKRSGSGPICVGPPK-------KQAKLSAFF-----------KKGLPEPV--------------VSEEELSQEAVVVPA-GHVSVVEQVSYDFEDEGK-RFNGEGRTITVEFSNFILVACYVPNSGEDLKRLNYRVEEWEPHMRQYLKKLNARKPVVYTGDLNCGHLDLDIHNPTAKHIPKQSGLTVLERSAFTQMLQETQYRDAFRYFYPDAKGQFTYWSVRAGNRPYNKGIRLDYFICSPDMFSVAEGGEEAKETEGT-------------RTRVLAHDSYILHKETVGCSDHCPVVLVVKM 390          
BLAST of mRNA_L-elsbetiae_contig6143.14713.1 vs. uniprot
Match: W7U5N9_9STRA (DNA-(apurinic or apyrimidinic site) endonuclease n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5N9_9STRA)

HSP 1 Score: 233 bits (593), Expect = 4.290e-67
Identity = 168/439 (38.27%), Postives = 220/439 (50.11%), Query Frame = 1
Query:  316 LPIFTERDAIVRRESLASGKSFTVLSWNVNGIRA---------TAGKGLETLRGLVKEE-KPDLVCFQETKIQEVDVDVKKHRLRDLLPGYVSEWNCSHPKKGYSGTAVF----FPKQDESWYG---KGGAKGXXXXXXXPSDEPAKKKLKQGKISSFFSATPKQKQRSTKGKMPTPLPAAESAASSSNGAATEEAAVSQ---------EDSPSPLPGGLSGLKVLGVRFGIGGDAKHNTEGRAITVEYEKLFVVTVYVPNSGDGLVRLKYRTDEWDPQLQSYVKALGKEKPVVLNGDLNVAHLDLDVYNRGAPHLPKNAATTKEERESFGEWMRNGKVSDAFRRLHPQADGAYTYWSVRANNRPGNKGLRLDYFVCSDSLFEEDGEXXXXXXXXXXXXXXXXXXXXXETGLVVHECFIIDKATVGLSDHCPIGITLRL 1554
            L + TERD + R  SL   KSF VLSWNVNG+              KG   L+ LV+EE   D++  QETK+Q    D K     D+LPGYV+ W+CS  KKGY+G A F    + K+  S Y    KG ++G                 KQ  ++SFF          TKGK   P   AE   ++   AA + A+++          ED  S +      L+VL VR G  G+   + EGR +T+E+   +VV VYV NSG  L RL+YR  +W+P  Q+Y+  L   KP ++ GD+NVA    DVYN GA HL K    T EERE+   W+R G   D FR LHP A GAYTYW+V+   R  NKGLRLD  V   +  + DG                        G+ V + FI+ +AT+G SDH PIG+ L L
Sbjct:   73 LVLQTERDLLAR-NSLPE-KSFKVLSWNVNGLNGILNGKAAQINGNKGSNVLQQLVQEEGNVDVIFLQETKLQ----DAKCAAFEDVLPGYVAHWSCSKTKKGYAGVAAFVHEKYVKRCISSYSDANKGSSRG-----------------KQATLASFFP---------TKGKETEPTKGAEGRIAAMKTAACKSASMASSCSIKDKEIEDGDSSV----EALQVLSVRRGCDGEDDEDEEGRVLTLEFGSFWVVGVYVTNSGMKLERLEYRLKQWNPSFQAYLARLNAVKPALVVGDMNVAPEASDVYNAGAKHLAKVPGLTPEEREAHAAWLRTG-WKDTFRALHPDARGAYTYWNVKTRARAENKGLRLDLAVIGAA--DMDGGR----------------------GVRVRDSFILHEATIGFSDHAPIGVVLDL 450          
BLAST of mRNA_L-elsbetiae_contig6143.14713.1 vs. uniprot
Match: A0A7S2VFC3_9STRA (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2VFC3_9STRA)

HSP 1 Score: 231 bits (589), Expect = 3.150e-65
Identity = 152/397 (38.29%), Postives = 207/397 (52.14%), Query Frame = 1
Query:  376 SFTVLSWNVNGIRATAGKGLETLRGLVKEEKPDLVCFQETKIQEVDVDVKKHRLRD----LLPGYVSEWNCSHPKKGYSGTAVFFPKQDESWYGKGGAKGXXXXXXXPSDEPAKKKLKQGKISSFFSATPKQKQRSTKGKMPTPLPAAESAASSSNGAATEEAAVSQEDSPSPLPGGLSGLKVLGVRFGIGGDAKHNTEGRAITVEYEKLFVVTVYVPNSGDGLVRLKYRTDEWDPQLQSYVKALGKEKPVVLNGDLNVAHLDLDVYNRGAPHLPKNAATTKEERESFGEWMRNGKVSDAFRRLHPQADGAYTYWSVRANNRPGNKGLRLDYFVCSDSLFEEDGEXXXXXXXXXXXXXXXXXXXXXETGLVVHECFIIDKATVGLSDHCPIGITLRL 1554
            +FTV+SWNV G+RA   K  + L  L +  + D++C QE K+Q+V +D  K ++R+     L G+ S W+ S  KKGYSGTA+F  K+       GG            D+ +KK  KQ KI +FF++  K+   +TKG                             DS   +P  +S L+ L V   +G   KH+ EGR +T E+    +  VYVPNSG  L RL YRT+EWD    + ++ L K KPV+  GDLNVAH + D +N GA HL K+A TT +ER SF   +  G V DAFR LH  A G Y+YWS RA NR  NKGLRLDYF+CS  L E+D +                        +VV + +I+    +G SDHCPI + + +
Sbjct:  254 TFTVISWNVAGLRAFIKKQPDALANLAERYQADVICLQEHKLQDVHLDDPKLKIREHFEEKLGGFESHWSYSTTKKGYSGTAMFIRKR-------GGG-----------DDASKKGKKQAKIGAFFTSKNKEGDEATKG-----------------------------DSIGDIP--VSHLQPLNVMTELG-LPKHDGEGRTVTAEFPLFHLTNVYVPNSGQKLDRLGYRTEEWDTDFLNKMQQLEKGKPVIWLGDLNVAHNEKDTWNEGAKHLVKSAGTTPQERASFDRQLGAGFV-DAFRHLHQDAMGHYSYWSQRAGNREPNKGLRLDYFICSKDLMEDDDDRK----------------------VVVRDSYIVPDQ-LG-SDHCPIVLEIEM 575          
BLAST of mRNA_L-elsbetiae_contig6143.14713.1 vs. uniprot
Match: A0A0L0G0P7_9EUKA (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G0P7_9EUKA)

HSP 1 Score: 224 bits (570), Expect = 6.130e-63
Identity = 148/423 (34.99%), Postives = 211/423 (49.88%), Query Frame = 1
Query:  310 AKLPIFTERDAIVRRESLASGKSFTVLSWNVNGIRAT--AGKGLETLRGLVKEEKPDLVCFQETKIQEVDVDVKKHRLRDLLPGYVSEWNCSHPKKGYSGTAVF--FPKQDESWYGKGGAKGXXXXXXXPSDEPAKKKLKQGKISSFFSATPKQKQRSTKGKMPTPLPAAESAASSSNGAATEEAAVSQEDSPSPLPGGLSGL-KVLGVRFGIGGDAKHNTEGRAITVEYEKLFVVTVYVPNSGDGLVRLKYRTDEWDPQLQSYVKALGKEKPVVLNGDLNVAHLDLDVYNRGAPHLPKNAATTKEERESFGEWMRNGKVSDAFRRLHPQADGAYTYWSVRANNRPGNKGLRLDYFVCSDSLFEEDGEXXXXXXXXXXXXXXXXXXXXXETGLVVHECFIID---KATVGLSDHCPIGITLRL 1554
            A+ P+F ER  + R+    S ++F  ++WNV G+RA     + +E+ R LV  EKPD +  QE K+Q  DV+  +  L   +PGY S W  S  KKGYSG AVF  +P ++                  PSD   K+    G   +  +A P ++++  +  +       +           E+  VS+  S   +    S + + + V       A  + EGR ITVEY   ++V  YVPNSG  L RL+YR   W+  L +Y+K L K KPV+L GDLNVAH D DVYN  A H+PK+A TT +ER +F E + +G++ D FR  HP A GA++YWS+R NNR  N+G+RLDYFV S  L +   +                      T        I+D         SDHCP+GI + +
Sbjct:  130 AERPMF-ERTPMTRKYKAGSEQAFVAVAWNVAGLRAVLRTPQRIESFRRLVDVEKPDYLLIQEHKLQGKDVEEIETALEPYIPGYESHWVSSTGKKGYSGVAVFLKYPVRNT-----------------PSD---KQVADAGDGKNCANAKPNKEKKGKQASLKDMFGIKKD---------VEQELVSETSSTKTMKNSDSQMYRAINVTMPKIEGA--SDEGRVITVEYPHFYMVGAYVPNSGQNLARLEYRIGGWNKSLNAYMKELEKTKPVILGGDLNVAHTDQDVYNPEAKHIPKSAGTTPQERRAFSELLSDGEMVDTFRHYHPDARGAFSYWSMRVNNRVVNRGMRLDYFVASKILVDNTAKSSETTDQSTDATEKPALASKNATPYKTQGAQILDAWISPEYNGSDHCPVGIAIAI 520          
BLAST of mRNA_L-elsbetiae_contig6143.14713.1 vs. uniprot
Match: A0A7S1WYZ2_9CHLO (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1WYZ2_9CHLO)

HSP 1 Score: 213 bits (541), Expect = 7.090e-63
Identity = 108/200 (54.00%), Postives = 130/200 (65.00%), Query Frame = 1
Query:  949 HNTEGRAITVEYEKLFVVTVYVPNSGDGLVRLKYRTDEWDPQLQSYVKALGKEKPVVLNGDLNVAHLDLDVYNRGAPHLPKNAATTKEERESFGEWMRNGKVSDAFRRLHPQADGAYTYWSVRANNRPGNKGLRLDYFVCSDSLFEEDGEXXXXXXXXXXXXXXXXXXXXXETGLVVHECFIIDKATVGLSDHCPIGITL 1548
            H  EGR ITVEYE+ FVV  YVPNSG  L RL YRT++WD  L++Y+ AL   KP +L GDLNVAHLD+D+YN  + H+ K+A TT +ER SFGE +  G V D FR LHP A G YTYWSVRA NR  N+GLRLDY V SD L +  GE                       GL +H+C+I+DKATVG SDHCP+G+ L
Sbjct:    4 HKGEGRIITVEYERFFVVGSYVPNSGMKLERLAYRTEQWDEDLRTYLAALATRKPTMLLGDLNVAHLDIDIYNVQSKHVAKSAGTTPQERASFGELLGRGWV-DGFRHLHPSATGCYTYWSVRAGNRATNRGLRLDYCVLSDGLTKTAGE-----------------------GLRLHDCWILDKATVGASDHCPVGVAL 179          
BLAST of mRNA_L-elsbetiae_contig6143.14713.1 vs. uniprot
Match: A0A7S2Y255_9STRA (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y255_9STRA)

HSP 1 Score: 216 bits (551), Expect = 3.280e-62
Identity = 141/417 (33.81%), Postives = 206/417 (49.40%), Query Frame = 1
Query:  322 IFTERDAIVR----RESLASGKSFTVLSWNVNGIRATAGKGLETLRGLVKEEKPDLVCFQETKIQEVDVDVKKHRLRDLLPGYVSEWNCSHPKKGYSGTAVFFPKQDESWYGKGGAKGXXXXXXXPSDEPAKKKLKQGKISSFFSATPKQKQRSTKGKMPTPLPAAESAASSSNGAATEEAAVSQEDSPSPLPGGLSGLKVLGVRFGIGGDAKHNTEGRAITVEYEKLFVVTVYVPNSGDGLVRLKYRTDEWDPQLQSYVKALGKEK--PVVLNGDLNVAHLDLDVYNRGAPHLPKNAATTKEERESFGEWMRNGKVSDAFRRLHPQADGAYTYWSVRANNRPGNKGLRLDYFVCSDSLFEEDGEXXXXXXXXXXXXXXXXXXXXXETGLVVHECFIIDKATVGLSDHCPIGITLRL 1554
            + TE+D +V+     E+  +  +  + SWNV G+RA   K    L  LV+E   D++C QETK+QE  V+  K  +   + GY + ++CS  KKGYSGTAVF   +  S                     +K K KQ  +  FF ++ + K ++T                        E   S  D    +P  +S        + IG   +H+ EGR + V++    +  VYVPN+G GL RL+YR  EWD    S+++   +++  PV+  GDLN+AH +L+V+N GA HLPK A  T EER SF   +  G V D FRRLHP A G Y+YWS+RA NR  NKGLRLDYF+C ++ F+E+ +                        +V  + +++       SDHCP+ + L L
Sbjct:    4 VLTEKDPLVKLWNAAEAPETSYTMKIASWNVAGLRAVLKKSPTALSDLVQEHDLDVLCLQETKLQEQHVEDPK--INTSIEGYQAYYSCSTEKKGYSGTAVFVRDKSSS---------------------SKTKKKQATMDQFFGSSSQSKTKTT----------------------NNEKVSSAFDETLLIPQSVS--------YEIGAP-QHDAEGRVVVVDFPTFSLCNVYVPNAGQGLKRLEYRVQEWDQDFLSFMQTKKEDRGVPVLWLGDLNIAHTNLEVWNDGAKHLPKQAGVTPEERASFTAQLEAGFV-DVFRRLHPTAKGHYSYWSMRAGNREPNKGLRLDYFICDEAAFDENSK------------------------VVPRDSYMLSDQQG--SDHCPVVLELEL 339          
BLAST of mRNA_L-elsbetiae_contig6143.14713.1 vs. uniprot
Match: A0A7S1GNR1_CYCTE (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GNR1_CYCTE)

HSP 1 Score: 213 bits (542), Expect = 2.830e-61
Identity = 145/391 (37.08%), Postives = 198/391 (50.64%), Query Frame = 1
Query:  391 SWNVNGIRATAGKGLETLRGLVKEEKPDLVCFQETKIQEVDVDVKKHRLRDLL---PGYVSEWNCSHPKKGYSGTAVFFPKQDESWYGKGGAKGXXXXXXXPSDEPAKKKLKQGKISSFFSATPKQKQRSTKGKMPTPLPAAESAASSSNGAATEEAAVSQEDSPSPLPGGLSGLKVLGVRFGIGGDAKHNTEGRAITVEYEKLFVVTVYVPNSGDGLVRLKYRTDEWDPQLQSYVKALGKEKPVVLNGDLNVAHLDLDVYNRGAPHLPKNAATTKEERESFGEWMRNGKVSDAFRRLHPQADGAYTYWSVRANNRPGNKGLRLDYFVCSDSLFEEDGEXXXXXXXXXXXXXXXXXXXXXETGLVVHECFIIDKATVGLSDHCPIGITLRL 1554
            SWNV G+RA      + L  LV E   D++C QETK+QE+ +D  K ++R  L    GY + ++CS  +KGY+GTAVF  +                              KQ  ++ FF ++   K ++TK           +AA+SS                 PLP  +  L    V F IG + +H+TEGR ITV++    +  VYVPNSG  L RL YRT++WD     ++    + KPV   GDLNVAH  ++V+N GA HLPK A  T +ER SF + + +G V DAFRRLHP A G Y+YWS RA NR  NKGLRLDYF+CS  LF+   +                        +VV + +I+    VG SDHCP+ + L +
Sbjct:    1 SWNVAGLRALLKNRPDALSNLVTEHDLDVLCLQETKLQEMHLDDPKLKIRGHLLESEGYDAYYSCSVARKGYAGTAVFCKRHGTE-------------------------TKQKTMNDFFKSS---KTKTTK-----------TAAASSK----------------PLPIDVKYLIPDQVTFKIGKE-EHDTEGRVITVDFPLFSMTNVYVPNSGQKLDRLTYRTEQWDKDFLQFMHKKHESKPVFWAGDLNVAHTAMEVWNDGAKHLPKQAGVTPQERASFQQQLDSGFV-DAFRRLHPDAKGCYSYWSQRAGNREPNKGLRLDYFLCSPELFDSTQQ------------------------VVVRDSYILYDV-VG-SDHCPVVMELEI 308          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6143.14713.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ59_ECTSI3.100e-16258.13DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A835YNZ2_9STRA5.490e-9442.96DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A061QUM9_9CHLO2.710e-8743.14DNA-(apurinic or apyrimidinic site) endonuclease (... [more]
A0A7S3H8Q9_9STRA7.470e-7838.90DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
W7U5N9_9STRA4.290e-6738.27DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A7S2VFC3_9STRA3.150e-6538.29DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A0L0G0P7_9EUKA6.130e-6334.99DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A7S1WYZ2_9CHLO7.090e-6354.00DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A7S2Y255_9STRA3.280e-6233.81DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A7S1GNR1_CYCTE2.830e-6137.08DNA-(apurinic or apyrimidinic site) endonuclease n... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6143contigL-elsbetiae_contig6143:1467..8161 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score486.9
Seed ortholog evalue1.1e-134
Seed eggNOG ortholog2880.D7FQ59
Preferred nameARP
KEGG rclassRC00064,RC00090,RC00162
KEGG koko:K01142,ko:K01930,ko:K10771
KEGG ReactionR00942,R02237,R04241
KEGG Pathwayko00790,ko01100,ko01523,ko03410,map00790,map01100,map01523,map03410
KEGG ModuleM00296
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0003906,GO:0004518,GO:0004527,GO:0004528,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006289,GO:0006355,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0008296,GO:0008309,GO:0008311,GO:0008408,GO:0009295,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016796,GO:0016895,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0033554,GO:0033683,GO:0034641,GO:0042578,GO:0042644,GO:0042646,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0045893,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141
EggNOG free text desc.double-stranded DNA 3'-5' exodeoxyribonuclease activity
EggNOG OGsCOG0708@1,KOG1294@2759
EC3.1.11.2,4.2.99.18,6.3.2.17
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03400
Ec32 ortholog descriptionEndonuclease/exonuclease/phosphatase
Ec32 orthologEc-01_007370.1
Exons7
Model size1586
Cds size1392
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816672.7445748-UTR-L-elsbetiae_contig6143:1466..16341622816672.7445748-UTR-L-elsbetiae_contig6143:1466..1634Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6143 1467..1634 +
1691683729.3022823-UTR-L-elsbetiae_contig6143:1466..16341691683729.3022823-UTR-L-elsbetiae_contig6143:1466..1634Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6143 1467..1634 +
1622816672.8535192-UTR-L-elsbetiae_contig6143:8135..81611622816672.8535192-UTR-L-elsbetiae_contig6143:8135..8161Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6143 8136..8161 +
1691683729.3929152-UTR-L-elsbetiae_contig6143:8135..81611691683729.3929152-UTR-L-elsbetiae_contig6143:8135..8161Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6143 8136..8161 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816672.7583969-CDS-L-elsbetiae_contig6143:1634..17971622816672.7583969-CDS-L-elsbetiae_contig6143:1634..1797Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6143 1635..1797 +
1691683729.3168864-CDS-L-elsbetiae_contig6143:1634..17971691683729.3168864-CDS-L-elsbetiae_contig6143:1634..1797Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6143 1635..1797 +
1622816672.772076-CDS-L-elsbetiae_contig6143:2152..23101622816672.772076-CDS-L-elsbetiae_contig6143:2152..2310Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6143 2153..2310 +
1691683729.3282135-CDS-L-elsbetiae_contig6143:2152..23101691683729.3282135-CDS-L-elsbetiae_contig6143:2152..2310Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6143 2153..2310 +
1622816672.7854335-CDS-L-elsbetiae_contig6143:4378..45881622816672.7854335-CDS-L-elsbetiae_contig6143:4378..4588Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6143 4379..4588 +
1691683729.3431332-CDS-L-elsbetiae_contig6143:4378..45881691683729.3431332-CDS-L-elsbetiae_contig6143:4378..4588Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6143 4379..4588 +
1622816672.7994165-CDS-L-elsbetiae_contig6143:5399..56901622816672.7994165-CDS-L-elsbetiae_contig6143:5399..5690Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6143 5400..5690 +
1691683729.352758-CDS-L-elsbetiae_contig6143:5399..56901691683729.352758-CDS-L-elsbetiae_contig6143:5399..5690Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6143 5400..5690 +
1622816672.8147628-CDS-L-elsbetiae_contig6143:6103..62611622816672.8147628-CDS-L-elsbetiae_contig6143:6103..6261Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6143 6104..6261 +
1691683729.3614273-CDS-L-elsbetiae_contig6143:6103..62611691683729.3614273-CDS-L-elsbetiae_contig6143:6103..6261Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6143 6104..6261 +
1622816672.8312583-CDS-L-elsbetiae_contig6143:6870..70481622816672.8312583-CDS-L-elsbetiae_contig6143:6870..7048Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6143 6871..7048 +
1691683729.372792-CDS-L-elsbetiae_contig6143:6870..70481691683729.372792-CDS-L-elsbetiae_contig6143:6870..7048Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6143 6871..7048 +
1622816672.8424783-CDS-L-elsbetiae_contig6143:7901..81351622816672.8424783-CDS-L-elsbetiae_contig6143:7901..8135Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6143 7902..8135 +
1691683729.384397-CDS-L-elsbetiae_contig6143:7901..81351691683729.384397-CDS-L-elsbetiae_contig6143:7901..8135Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6143 7902..8135 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6143.14713.1prot_L-elsbetiae_contig6143.14713.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6143 1635..8135 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6143.14713.1

>prot_L-elsbetiae_contig6143.14713.1 ID=prot_L-elsbetiae_contig6143.14713.1|Name=mRNA_L-elsbetiae_contig6143.14713.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=464bp
MSSTTDGMTTGAEESQDTPEASLADTQESQDTSAAGKPNTGKRKKAKAKL
PIFTERDAIVRRESLASGKSFTVLSWNVNGIRATAGKGLETLRGLVKEEK
PDLVCFQETKIQEVDVDVKKHRLRDLLPGYVSEWNCSHPKKGYSGTAVFF
PKQDESWYGKGGAKGGSGGGGSPSDEPAKKKLKQGKISSFFSATPKQKQR
STKGKMPTPLPAAESAASSSNGAATEEAAVSQEDSPSPLPGGLSGLKVLG
VRFGIGGDAKHNTEGRAITVEYEKLFVVTVYVPNSGDGLVRLKYRTDEWD
PQLQSYVKALGKEKPVVLNGDLNVAHLDLDVYNRGAPHLPKNAATTKEER
ESFGEWMRNGKVSDAFRRLHPQADGAYTYWSVRANNRPGNKGLRLDYFVC
SDSLFEEDGEEKGDGKGKGKRGGKRKAEAKAETGLVVHECFIIDKATVGL
SDHCPIGITLRLP*
back to top

mRNA from alignment at L-elsbetiae_contig6143:1467..8161+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6143.14713.1 ID=mRNA_L-elsbetiae_contig6143.14713.1|Name=mRNA_L-elsbetiae_contig6143.14713.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6695bp|location=Sequence derived from alignment at L-elsbetiae_contig6143:1467..8161+ (Laminarionema elsbetiae ELsaHSoW15)
GCAGGCGGAGGAGTGGCAGACAGGACTGAGACAAAGTAGAGAGAGACTGA GGAGGCAGAAAGAGAGGCGAGACGCGAAAGTCTAGATATACAGAAGTGTC GCAGAGCAGAGCAAGTCACTGAGAGCATTTGTTGGTGGAACGCCACATAC ACATAAAAGGACGCACGGATGAGCTCGACAACAGATGGAATGACCACCGG GGCCGAAGAGAGCCAGGACACGCCCGAAGCATCATTGGCCGACACCCAGG AGAGTCAAGACACCTCTGCTGCTGGCAAGCCAAACACTGGCAAACGGAAG AAGGCCAAGGCCAAGTTGCCCATTTTCACAGGTCTGCCTCCAATGATATC TAGACTAAATAGACTCTTTGTAGACTGCGGGCGTTCATGTATTTTTCTCT CTGTCCAGCAGCGACTCTCCTTATTCAGACTTTCAATGCAGTGCCTGGCA TCAAATCTACTTCCTAGTCTAGTTTAGTCTTACGTCTACTGCTGTATCTG GTTCTGGATATGCTGCTGTCGGGGTAGTGTCTACAAAGTATCCAAAGTAG TAATTCCCGGCCAGGGGCAGAGAGAGACAGCCGTGTTCAACAACCCGAAC CGACCGGTAACAAGCCTTATCCCACTTAGATATGCAATACAACGGCGGTG CTGTTCGTTTTCGCCGCTGCCGCTCGCTGTACCCAGAGCGAGATGCGATC GTGCGGCGTGAGTCACTGGCTTCAGGAAAAAGCTTCACCGTGCTGTCGTG GAACGTGAACGGCATCCGGGCGACCGCAGGGAAGGGGCTGGAGACGCTCA GGGGCTTGGTGAAAGAGGAGAAGCCCGATTTAGTCTGCTTTCAGGTGCGA ACAGCGAAGCAAGCGACCGACCGCTGCTCCCGGATCGGGAGTGGTTCAAT CAAAACAGAAAAACCACGGAGTCCCCCGTCCAATGGTCTTTTGTGGGGAA ATTCTCTCTTTTGATTTACCTCGCATAGCGTGTGGAGGGGAGCGAGGGGC TCCACACTATTTGTCTTGGGTTTTGATCGCTTTGCTTAACCCTTTTAGTA CGCCAGCCCTCTGAAAAAACAAATTATCGCCGAAAAGTTTATCGCGCCTT CTGGGTGCCCACTGATTGGCCGAGAAACAACAGTCTCTCCATTTTGCAGC TGCGGAGCCCCGACATCATTTGGAGAAAAAAAGTACACTGAAACGCAGTA CAAACTGTATTAGCGTACTAGACAAACAGACTTCTCTGCGGTAGAGACAT GACGTAAACCCTGAGCTGTGCGTGTGTAAACACACGAAGCAGCCGTCACA ACACACAATAGAGCGTGGCGGGCGACGCAACCCGCTCGAAGCTCAGCGGA CGGCGATTCTCAAGAGTGACAGCAAAGCGGTGTGTGTGCTGTGCAGCTCA AACGGCTGAACCGCCGGGGGCGCCGCGGAAGGTACGAATCGCGGCGATCT TGTTCCCGATATTTTTGAGATATCCGCAACAACTCAGATGTGTCTCCGGC ACTGCTGTGGAGCTGTGTGCAGGGCAAGTAGGGCAGGTATAGTTTCCATA CCCCTCGGCGGGGTGCCCCCAGGCCGTTTTACGGGTTCCAAAGACTACCA TTGCAAGTCTAGGTCGAGAACAGTGGCCAAATTTTAGGTGTCGCCAATTT TTTCTCCAAACGGGCTTCCAGTACTAAAAGGGTTATAACCCTTCGGGTCC ATTTTATTTTCGTATACCTCTTCTGGGTATAAGTTAGCCTGTGATCACGC GATTTGACCGCATCAAGTGTTGGAATAGTGCGGACATGGGAGGTACTGGG TGGACAGATCAGAACGGTTTTTAATGTGAAGAAACAACCCCACAACAAAC AACAACAACATACGCCGTCGTATGTAACGCCACTGCCTGTTATCGGGAAT ATGTACACATGCCGAGCAGTTCAATCTAGCTTTCGATTCTTTTGGAGTAG GCAGTCCAGTCTACATATATATACAATCTAGTCTTTCTACGTTCTCTCGA AACATGCATGCGGGAAAGAACTAACCGATCGGCCGCCGCCCTTGCTGCTC TCGAATGCGGCCCGTTTCCTGCCGATCGGCACACCCGCTCTTGAAGCACT AATAACACAGACTAAGTGCCTACATATATGGATACTACATACACTCCCCG AAGTGGTGCCAAAGAATTATCCTTCAAACTCAAACTCAGGACAAGATTCC AGCTTTCATCGATGCAGAGTCAATCAACCCACCCACGTGCTGGTCCAAGA ATCATCCTTCAAACTCGGGACAAGTTCCCAGGTTCCCAGCCTTCACCACT GCGGAATTAATCAGTCAACCCACCACCGTGCGTGCGTGCACGCCAAAAAT AACTCTGACAGACACAGCAGTAAATAGCACATACCGCTGAAGCTGCAAAG CACATGTGTGTGTTTGTATATGTTGTCTTCACATTAAAAACCGTTCCGAT CTCTCTGTCCAGTACCTCTCAAATGTCCGCACTAATCCAACACTTGATGC GGTCAATTCCCGTGGGTCACAGGCTAACTTATACCCAAGGAAAGGTACAC GAAAAATAAAATGGGCCCGAAGGGCCAGCAAAGCAATAATAAAACAGATA TCGAATCTGGAGCCCTTCGCTCTCCTCTACACGCTATGTGAGGCATATAC AGCAGCAGTAAATAGCGTAAAGTAGTACATACCGCGGAAGCTACAAAGCA CATGCGCGCCCGAAACACCACCCCCTCGAAGACAAACCAACCCACAGACC CCCCCCCCCCCCCCAACCCAGGAGACCAAGAACCAGGAGGGCGACGTCGA CGTAAAGAAACACNNNNNNNCCGGAAGCACAAAAACACCCGCCCCCCCCA AACCCCCCCCCCCCAAAAAAAAACCCACCCCCCGCCCCCCCCCCCCCCCC CCCACAACCTAGGAGACCAAGATCCAGGAGGTCGACGTCGACGTAAAGAA ACACCGCCTCCGAGACCTCCTTCCAGGGTACGTCTCCGAGTGGAACTGCT CCCACCCCAAGAAGGGCTACTCGGGCACGGCGGTCTTCTTCCCCAAGCAG GACGAGAGCTGGTACGGGAAGGGGGGCGCGAAGGGAGGATCGGGGGGGGG CGGGTCACCGTCAGACGAGCCGGTAAGTCTATCTATATAAGCATGTATGT ATGGTAGATTGTTTCTATTTTTAAGTATGGAGATCGTTTGAAACAGAACA CCCACTTTCTGAGCTTGTTTTCCCTTTCCTTCTGTCCGTAGAATCCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCCCGCCTCACGCC ACGGGCGCGCGCCGCCGGGGGGGGGGGCCCCCCCGCCCCCCTGCCCGTGT TCTGTGCTCNNNNNNNNNNTTTTTTTGTGGGGGGTGCGTTTGAAACAAAA CCCCCCCTTTTTTTGCTTTTTTTCCCTTTCCTTTTTCCCCTAAAACCCCC CCCCCCCCCCCCCCCGGCTTTTTCTCCTGTCGCTTCGAGTCAAGATAGAG ACGAGATCGCCAGGCAGCGTGCTGATCTCTCTGCCCGAGCAGACTTTTTT GCAGCCTCGCTCTCTTCCAAGCCGCTGTTTGTGTGGTATAAAAGCATTTC TTAGGCCAGCGAGTTGGTTACGCCACCTCCATTGCTCTTTGCGTGGCCTG CCTGCTTGCCTGCCTGCCTTCCGGCCTGCCGCGTGTTTGAAGGGAGTCCC GCGTGCCTGCGGCCTCCGCTTTGACGGCAGGCAGTCTTTGCGCCCATTGC CCGCCGCATCCCTTCCGGCCAGTCGATCAGCGTCTGATACACACACACAC ACACACACATACACACAAAAACACACAGCAGTTGGTCCTCGAGGTGATCA ACGAACTACAGGTAAAATCGACTCCTCCGATCCGATCCGATCCGATCCGT GCGTGCGCCTCGCTGTCTGCTTCTCACACACAGGCGAAGAAAAAGCTGAA GCAGGGGAAGATTTCATCGTTCTTTTCTGCGACGCCGAAGCAGAAGCAGC GATCGACGAAAGGTAAGATGCCGACGCCGCTCCCCGCCGCAGAGTCAGCA GCGTCGTCATCCAACGGCGCAGCGACAGAGGAGGCGGCGGTGTCCCAGGA GGATTCGCCGTCGCCGTTGCCCGGAGGCCTCAGCGGGCTCAAGGTGCTCG GGGTCAGGTTCGGCATCGGGGGTGACGCCAAGCACAACACAGAAGGCCGG GCGATCACGGTGGAGTACGAGAAGGTAATGTAGGTAGTATATAGGCCTAG GTACTTTGAAGAGTGTAGTAATGCCAAGAGTGAACAGGCGAGGTGGTCGG GAGAAAGGAGCTATAGTAGTGTGTGAAGAGGATATATTATCGCCGACTCG TTGCTGCCATCTTGCCGGGTCGTTGCGCGAGATCGTTTTTTGTACAGGAT GGGGAAAGGCGGGGGTAGTATTAATAGTTGGAAAACAAATACTTGGTACG CCTTTAATAGACATAAAGGTACATGAATGATTTCTCAACACCGTGCATAG AGAGACGCTCGGGAGCATCCCTCGTGTTGCTGCAATATGTAGCACGCAGC GGTTTTTGCGTCAGACTTTTGTTCACCGGCTCAGGATTGTCCCTTCCGTA TGTCGCCGCCCGACCGCGATGCTTGTACCAAGGGCAGTTATTCGTCGTGA CCGTCTACGTGCCCAACTCGGGAGATGGGCTGGTGCGCCTCAAGTACCGC ACCGACGAATGGGACCCGCAACTGCAGAGCTACGTGAAAGCTCTGGGGAA GGAGAAGCCGGTCGTGTTGAACGGAGATCTCAACGTCGCGCACTTGTGAG TACCGCATGGGACGCTTGCTGCTTGCTGTTTGCTGTTTACTGTTGCTGTT GGTGGTTGTTGACTTGCGGTTGCGGTTGCTGTTTGCTGTTTGTTGTTGCT TTTTGGTGGTTGTTGATTTGCTGTTGCTGCTTGCTGCCCGCGGCTGTCAT TGGTTCGCTTGTTCTCTTTTTCCCAGGTACAGCCTACATAAATGGCGGGT ATTCTCGAGCGTCAACCAGTGTCTTTTCTGTCATAGCAGTAGTAGCGACG AGCGATCAGTCGCCTGTGCCATTCCCAATCTCACCCACCCCAACAGGCAA AAACAACCACGTCAGGAGGGACTCGATGCCTCTTGTGTGCCAGCAGCCCG ATTGAAACACCGACCTCCTGAAAATGGATGGTGTGCTCTGGACCCCCCCC CCCCCCCCCCACCCCCCCCCCCCCAACCTCAACCCCCGACGTCAACCATC CGGGGACTCCCACCCGCCCTGCGAAAGCGGANNNNNNNNNNGAGGGATCC GCGGCCGCTTGTGGGCCGGACGCCCGTGCGAACCCCCGGCCCCCCCAAAA GGGACGGTGGGCCCTGGCCCCCCCCCCCCCCTCGAACCCCGCCCACGCAC ACAGAGACCTCGACGTCTACAACCGCGGTGCGCCGCACCTGCCGAAAAAT GCGGCGACGACGAAGGAAGAGCGGGAGTCATTCGGCGAGTGGATGCGGAA CGGAAAAGTCTCGGATGCGTTTCGACGACTTCACCCACAGGCTGACGGGG CGTACACGTACTGGAGCGTGCGAGCTAACAATGTGAGTGAATTGGTGTCA TTGGGTGCAGGTATGTATGTATTTATTTAGTGTATACAAATGTCAGCAGT CTACGTCCAGTCTGCGAAAAATTCGTTCCAGAGGGACTGTTGTAGGCATA CCATGTAACATACTAACCCCCTTTTTTCTTCCCGTCCAAGACATACTCAC TCGCACAAAATTATTACAGACAACCAGTTGTGTGCCCGCTCGCACGGACA AATAAATTAACAAAGACTCCGTAAGTATTTTATTTTAAATATATGTATGT GTGTCCGCACGCACACGGAGAGACAAAAAAAACAGCCTAGAGGCATCATA CAGCACTTCCCTGGTGTTGTCGTCGGGCGCCAGTCCACCCGTGGCATAGT TAGTAGAGGTGGTCGGTGGTACGCAAGCAGTTGTCCTCTCTATGTATGTA ATATTTTTTTCTCGTGGGGCCTGTTTTGCTTTTCTTTTTTTTGGCTTGTT TGGTGTGCTTTCGTCGTGCTTTTCGAGCCCTCGGTGTTGTTGTTAACTCT GCCTGTTTCTTTCTTTCTTTCGCGTTCATGAAATACCCTTTGTCTCTTTT GTGTGCGGCCCGGCTCTTCGTGCAGCCACAGCAGAAGCCCCCCCCCCCCC CCCACCCGCCCGGTTCTCGTCTGCTACCGCTTGTTTTCGCTGTTTGTTGT TGCCATCACAGTAAAAAAAAAACTCGCTCAGTACCTTCATCTATCCGCAT GATGCGGTAGATCCCCCCGTGGTCACAGGCTAACTTGCCCACAAAGGGTA TACGGAGTCCAAGCATTTAGTACCATATGTACTGAAATACAATGCCCACT CTGCTGTGCTTCACTATGTACCGACCTCGCTTCAGCGACCCGGCAACAAG GGGCTCCGCCTCGACTACTTCGTCTGCTCGGACTCACTGTTCGAGGAGGA CGGGGAGGAAAAGGGCGACGGTAAGGGCAAGGGCAAACGAGGCGGGAAGA GGAAGGCTGAGGCGAAAGCGGAGACGGGGCTGGTCGTCCACGAGTGCTTC ATTATCGACAAGGCAACCGTCGGTCTGTCCGACCACTGCCCGATCGGCAT CACGCTTCGCTTGCCGTGACACACACAACCAGGAGCAGCAGCAGC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig6143:1467..8161+

>mRNA_L-elsbetiae_contig6143.14713.1 ID=mRNA_L-elsbetiae_contig6143.14713.1|Name=mRNA_L-elsbetiae_contig6143.14713.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2784bp|location=Sequence derived from alignment at L-elsbetiae_contig6143:1467..8161+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAGCTCGACAACAGATGGAATGACCACCGGGGCCGAAGAGAGCCAGGA
CACGCCCGAAGCATCATTGGCCGACACCCAGGAGAGTCAAGACACCTCTG
CTGCTGGCAAGCCAAACACTGGCAAACGGAAGAAGGCCAAGGCCAAGTTG
CCCATTTTCACAGATGAGCTCGACAACAGATGGAATGACCACCGGGGCCG
AAGAGAGCCAGGACACGCCCGAAGCATCATTGGCCGACACCCAGGAGAGT
CAAGACACCTCTGCTGCTGGCAAGCCAAACACTGGCAAACGGAAGAAGGC
CAAGGCCAAGTTGCCCATTTTCACAGAGCGAGATGCGATCGTGCGGCGTG
AGTCACTGGCTTCAGGAAAAAGCTTCACCGTGCTGTCGTGGAACGTGAAC
GGCATCCGGGCGACCGCAGGGAAGGGGCTGGAGACGCTCAGGGGCTTGGT
GAAAGAGGAGAAGCCCGATTTAGTCTGCTTTCAGAGCGAGATGCGATCGT
GCGGCGTGAGTCACTGGCTTCAGGAAAAAGCTTCACCGTGCTGTCGTGGA
ACGTGAACGGCATCCGGGCGACCGCAGGGAAGGGGCTGGAGACGCTCAGG
GGCTTGGTGAAAGAGGAGAAGCCCGATTTAGTCTGCTTTCAGGAGACCAA
GATCCAGGAGGTCGACGTCGACGTAAAGAAACACCGCCTCCGAGACCTCC
TTCCAGGGTACGTCTCCGAGTGGAACTGCTCCCACCCCAAGAAGGGCTAC
TCGGGCACGGCGGTCTTCTTCCCCAAGCAGGACGAGAGCTGGTACGGGAA
GGGGGGCGCGAAGGGAGGATCGGGGGGGGGCGGGTCACCGTCAGACGAGC
CGGAGACCAAGATCCAGGAGGTCGACGTCGACGTAAAGAAACACCGCCTC
CGAGACCTCCTTCCAGGGTACGTCTCCGAGTGGAACTGCTCCCACCCCAA
GAAGGGCTACTCGGGCACGGCGGTCTTCTTCCCCAAGCAGGACGAGAGCT
GGTACGGGAAGGGGGGCGCGAAGGGAGGATCGGGGGGGGGCGGGTCACCG
TCAGACGAGCCGGCGAAGAAAAAGCTGAAGCAGGGGAAGATTTCATCGTT
CTTTTCTGCGACGCCGAAGCAGAAGCAGCGATCGACGAAAGGTAAGATGC
CGACGCCGCTCCCCGCCGCAGAGTCAGCAGCGTCGTCATCCAACGGCGCA
GCGACAGAGGAGGCGGCGGTGTCCCAGGAGGATTCGCCGTCGCCGTTGCC
CGGAGGCCTCAGCGGGCTCAAGGTGCTCGGGGTCAGGTTCGGCATCGGGG
GTGACGCCAAGCACAACACAGAAGGCCGGGCGATCACGGTGGAGTACGAG
AAGGCGAAGAAAAAGCTGAAGCAGGGGAAGATTTCATCGTTCTTTTCTGC
GACGCCGAAGCAGAAGCAGCGATCGACGAAAGGTAAGATGCCGACGCCGC
TCCCCGCCGCAGAGTCAGCAGCGTCGTCATCCAACGGCGCAGCGACAGAG
GAGGCGGCGGTGTCCCAGGAGGATTCGCCGTCGCCGTTGCCCGGAGGCCT
CAGCGGGCTCAAGGTGCTCGGGGTCAGGTTCGGCATCGGGGGTGACGCCA
AGCACAACACAGAAGGCCGGGCGATCACGGTGGAGTACGAGAAGTTATTC
GTCGTGACCGTCTACGTGCCCAACTCGGGAGATGGGCTGGTGCGCCTCAA
GTACCGCACCGACGAATGGGACCCGCAACTGCAGAGCTACGTGAAAGCTC
TGGGGAAGGAGAAGCCGGTCGTGTTGAACGGAGATCTCAACGTCGCGCAC
TTTTATTCGTCGTGACCGTCTACGTGCCCAACTCGGGAGATGGGCTGGTG
CGCCTCAAGTACCGCACCGACGAATGGGACCCGCAACTGCAGAGCTACGT
GAAAGCTCTGGGGAAGGAGAAGCCGGTCGTGTTGAACGGAGATCTCAACG
TCGCGCACTTAGACCTCGACGTCTACAACCGCGGTGCGCCGCACCTGCCG
AAAAATGCGGCGACGACGAAGGAAGAGCGGGAGTCATTCGGCGAGTGGAT
GCGGAACGGAAAAGTCTCGGATGCGTTTCGACGACTTCACCCACAGGCTG
ACGGGGCGTACACGTACTGGAGCGTGCGAGCTAACAATAGACCTCGACGT
CTACAACCGCGGTGCGCCGCACCTGCCGAAAAATGCGGCGACGACGAAGG
AAGAGCGGGAGTCATTCGGCGAGTGGATGCGGAACGGAAAAGTCTCGGAT
GCGTTTCGACGACTTCACCCACAGGCTGACGGGGCGTACACGTACTGGAG
CGTGCGAGCTAACAATCGACCCGGCAACAAGGGGCTCCGCCTCGACTACT
TCGTCTGCTCGGACTCACTGTTCGAGGAGGACGGGGAGGAAAAGGGCGAC
GGTAAGGGCAAGGGCAAACGAGGCGGGAAGAGGAAGGCTGAGGCGAAAGC
GGAGACGGGGCTGGTCGTCCACGAGTGCTTCATTATCGACAAGGCAACCG
TCGGTCTGTCCGACCACTGCCCGATCGGCATCACGCTTCGCTTGCCGTGA
CGACCCGGCAACAAGGGGCTCCGCCTCGACTACTTCGTCTGCTCGGACTC
ACTGTTCGAGGAGGACGGGGAGGAAAAGGGCGACGGTAAGGGCAAGGGCA
AACGAGGCGGGAAGAGGAAGGCTGAGGCGAAAGCGGAGACGGGGCTGGTC
GTCCACGAGTGCTTCATTATCGACAAGGCAACCGTCGGTCTGTCCGACCA
CTGCCCGATCGGCATCACGCTTCGCTTGCCGTGA
back to top